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At least 1,747 records · Page 97Linked to original sources
USGS2020

Citizen scientists record novel leaf phenology of invasive shrubs in eastern U.S. forests

Invasive shrubs are an emergent concern in deciduous forests of eastern North America. Their extended leaf phenology (ELP) – earlier leaf emergence and later leaf off compared to native shrubs and the overstory canopy – can simultaneously provide photosynthetic benefits to invasive shrubs while negatively affecting native flora and fauna through providing novel understory shade when the overstory canopy is leafless. However, phenology varies geographically, and the degree to which ELP from local-scale studies applies across the range of forests experiencing shrub invasion is unknown. In partnership with the USA National Phenology Network, we developed a citizen science campaign to record broad patterns of species-specific ELP – an otherwise prohibitively large effort. Using 1,500 observations of 14 species spanning 4 years, we found that the difference in leaf phenology between native and invasive shrubs can exceed 77 days within a growing season, a gap that decreases with increasing latitude by 2.9 [1.6, 4.2] days per degree latitude in the spring, and 2.2 [0.6,1.9] in the fall. Geographic trends in ELP provide a context for interpreting local scale phenology research while bridging inconsistent findings between existing studies and can streamline management by targeting detection and removal of invasive shrubs with leaves while natives are dormant. Furthermore, even small changes to seasonal phenology can impact forest communities, especially if there is a differential response to climate cues by nativity. After exploring broad-scale environmental variables associated with leaf phenology, we find a similar correlation with pre-growing season warmth for native and invasive shrubs, but a different relationship with dormant chill days – a variable less frequently considered for modeling spring phenology for forest productivity.

Biological Invasions↗
USGS2021

Monitoring wetland water quality related to livestock grazing in amphibian habitats

Land use alteration such as livestock grazing can affect water quality in habitats of at-risk wildlife species. Data from managed wetlands are needed to understand levels of exposure for aquatic life stages and monitor grazing-related changes afield. We quantified spatial and temporal variation in water quality in wetlands occupied by threatened Oregon spotted frog ( Rana pretiosa ) at Klamath Marsh National Wildlife Refuge in Oregon, United States (US). We used analyses for censored data to evaluate the importance of habitat type and grazing history in predicting concentrations of nutrients, turbidity, fecal indicator bacteria (FIB; total coliforms, Escherichia coli ( E. coli ), and enterococci), and estrogenicity, an indicator of estrogenic activity. Nutrients (orthophosphate and ammonia) and enterococci varied over time and space, while E. coli , total coliforms, turbidity, and estrogenicity were more strongly associated with local livestock grazing metrics. Turbidity was correlated with several grazing-related constituents and may be particularly useful for monitoring water quality in landscapes with livestock use. Concentrations of orthophosphate and estrogenicity were elevated at several sites relative to published health benchmarks, and their potential effects on Rana pretiosa warrant further investigation. Our data provided an initial assessment of potential exposure of amphibians to grazing-related constituents in western US wetlands. Increased monitoring of surface water quality and amphibian population status in combination with controlled laboratory toxicity studies could help inform future research and targeted management strategies for wetlands with both grazing and amphibians of conservation concern.

Oregon↗
USGS2020

Gaps and hotspots in the state of knowledge of pinyon-juniper communities

Pinyon-juniper (PJ) plant communities cover a large area across North America and provide critical habitat for wildlife, biodiversity and ecosystem functions, and rich cultural resources. These communities occur across a variety of environmental gradients, disturbance regimes, structural conditions and species compositions, including three species of juniper and two species of pinyon. PJ communities have experienced substantial changes in recent decades and identifying appropriate management strategies for these diverse communities is a growing challenge. Here, we surveyed the literature and compiled 441 studies to characterize patterns in research on PJ communities through time, across geographic space and climatic conditions, and among focal species. We evaluate the state of knowledge for three focal topics: 1) historical stand dynamics and responses to disturbance, 2) land management actions and their effects, and 3) potential future responses to changing climate. We identified large and potentially important gaps in our understanding of pinyon-juniper communities both geographically and topically. The effect of drought on Pinus edulis, the pinyon pine species in eastern PJ communities was frequently addressed, while few studies focused on drought effects on Pinus monophylla , which occurs in western PJ communities. The largest proportion of studies that examined land management actions only measured their effects for one year. Grazing was a common land-use across the geographic range of PJ communities yet was rarely studied. We found only 39 studies that had information on the impacts of anthropogenic climate change and most were concentrated on Pinus edulis . These results provide a synthetic perspective on PJ communities that can help natural resource managers identify relevant knowledge needed for decision-making and researchers design new studies to fill important knowledge gaps.

Arizona, California, Colorado, Nevada, New Mexico,↗
USGS2008

Distribution of geogenic arsenic in hydrologic systems: Controls and challenges

The presence of elevated concentration of arsenic (As) in natural hydrologic systems is regarded as the most formidable environmental crisis in the contemporary world. With its substantial presence in the drinking water of more than thirty countries worldwide, and with an affected population of more than 100 million, it has been termed as the largest mass poisoning in human history. In this special issue, we have tried to provide the most recent research advances on controls and challenges of this severe groundwater contaminant. The articles in this issue, originally presented in the 2006 Geological Society of America Annual Meeting, address the distribution of As in various geologic and geographic settings, the controls of redox and other geochemical parameters on its spatial and temporal variability, the influence of sedimentology and stratigraphy on its occurrence, and mechanisms controlling its mobility. The knowledge available from these studies should provide a roadmap for future research in arsenic contamination hydrology.

Journal of Contaminant Hydrology↗
USGS2007

An innovative carbonate coprecipitation process for the removal of zinc and manganese from mining impacted waters

Although mine drainage is usually thought of as acidic, there are many cases where the water is of neutral pH, but still contains metal species that can be harmful to human or aquatic animal health, such as manganese (Mn) and zinc (Zn). Typical treatment of mine drainage waters involves pH adjustment, but this often results in excessive sludge formation and removal of nontoxic species such as magnesium and calcium. Theoretical consideration of the stability of metal carbonate species suggests that the target metals could be removed from solution by coprecipitation with calcium carbonate. The U.S. Geological Survey has developed a limestone-based process for remediation of acid mine drainage that increases calcium carbonate saturation. This treatment could then be coupled with carbonate coprecipitation as an innovative method for removal of toxic metals from circumneutral mine drainage waters. The new process was termed the carbonate coprecipitation (CCP) process. The CCP process was tested at the laboratory scale using a synthetic mine water containing 50 mg/L each of Mn and Zn. Best results showed over 95% removal of both Mn and Zn in less than 2 h of contact in a limestone channel. The process was then tested on a sample of water from the Palmerton zinc superfund site, near Palmerton, Pennsylvania, containing over 300 mg/L Zn and 60 mg/L Mn. Treatment of this water resulted in removal of over 95% of the Zn and 40% of the Mn in the limestone channel configuration. Because of the potential economic advantages of the CCP process, further research is recommended for refinement of the process for the Palmerton water and for application to other mining impacted waters as well. ?? Mary Ann Liebert, Inc.

Environmental Engineering Science↗
USGS1983

Sedimentology of Southwestern Roads region, U.S. Virgin Islands: origin and rate of sediment accumulation

Sand deposits on southern insular shelf of St. Thomas, U.S. Virgin Islands, were investigated to determine their origin, environmental processes and accumulation rates. Sea-floor samples show that the sand has been derived (in situ) mainly from calcareous algae and molluscs. Zonation of the dominant sand producers is related to the present environmental setting; water depth has the greatest influence. Carbon-14 data (bulk sample) of cores indicate accumulation rates of slightly less than 1 mm/year for the last 5,000 years. Faunal studies show that the climate has remained constant over the past 5,000 years. The only changes in environmental conditions appear to have been an increase in water depth, changes in the patterns of water movement, and an increase in water temperature.

Virgin Islands↗
USGS2016

Delta smelt: Life history and decline of a once abundant species in the San Francisco Estuary

This paper reviews what has been learned about Delta Smelt and its status since the publication of The State of Bay-Delta Science, 2008 (Healey et al. 2008). The Delta Smelt is endemic to the upper San Francisco Estuary. Much of its historic habitat is no longer available and remaining habitat is increasingly unable to sustain the population. As a listed species living in the central node of California’s water supply system, Delta Smelt has been the focus of a large research effort to understand causes of decline and identify ways to recover the species. Since 2008, a remarkable record of innovative research on Delta Smelt has been achieved, which is summarized here. Unfortunately, research has not prevented the smelt’s continued decline, which is the result of multiple, interacting factors. A major driver of decline is change to the Delta ecosystem from water exports, resulting in reduced outflows and high levels of entrainment in the large pumps of the South Delta. Invasions of alien species, encouraged by environmental change, have also played a contributing role in the decline. Severe drought effects have pushed Delta Smelt to record low levels in 2014–2015. The rapid decline of the species and failure of recovery efforts demonstrate an inability to manage the Delta for the “co-equal goals” of maintaining a healthy ecosystem and providing a reliable water supply for Californians. Diverse and substantial management actions are needed to preserve Delta Smelt.

California↗
USGS2023

Recognizing political influences in participatory social-ecological systems modeling

Stakeholder participation in social-ecological systems (SES) modeling is increasingly considered a desirable way to elicit diverse sources of knowledge about SES behavior and to promote inclusive decision-making in SES. Understanding how participatory modeling processes function in the context of long-term adaptive management of SES may allow for better design of participatory processes to achieve the intended outcomes of inclusionary knowledge, representativeness, and social learning, while avoiding unintended outcomes. Long-term adaptive management contexts often include political influences -- attempts to shift or preserve power structures and authority, and efforts to represent the political and economic interests of stakeholders -- in the computer models that are used to shape policy making and implementation. In this research, we examine a period that included a major transition in the watershed model used for management of the Chesapeake Bay in the United States. The Chesapeake Bay watershed model has been in development since the 1980s, and is considered by many to be an exemplary case of participatory modeling. We use documentary analysis and interviews with participants involved in the model application and development transition to reveal a variety of ways in which participatory modeling may be subject to different kinds of political influences, some of which resulted in unintended outcomes, including: perceptions of difficulty updating the model in substantive ways, “gaming” of the model/participatory process by stakeholders, and increasing resistance against considering uncertainty in the system not captured by the model. This research suggests unintended or negative outcomes may be associated with both participatory decision-making and stakeholder learning even though they are so often touted as the benefits of participatory modeling. We end with a hypothesis that further development of a theory of computer model governance to bridge model impact and broader theories of environmental governance at the science-policy interface may result in improved SES modeling outcomes.

Maryland, Virginia↗
USGS2012

The U.S. Geological Survey's TRIGA® reactor

The U.S. Geological Survey (USGS) operates a low-enriched uranium-fueled, pool-type reactor located at the Federal Center in Denver, Colorado. The mission of the Geological Survey TRIGA® Reactor (GSTR) is to support USGS science by providing information on geologic, plant, and animal specimens to advance methods and techniques unique to nuclear reactors. The reactor facility is supported by programs across the USGS and is organizationally under the Associate Director for Energy and Minerals, and Environmental Health. The GSTR is the only facility in the United States capable of performing automated delayed neutron analyses for detecting fissile and fissionable isotopes. Samples from around the world are submitted to the USGS for analysis using the reactor facility. Qualitative and quantitative elemental analyses, spatial elemental analyses, and geochronology are performed. Few research reactor facilities in the United States are equipped to handle the large number of samples processed at the GSTR. Historically, more than 450,000 sample irradiations have been performed at the USGS facility. Providing impartial scientific information to resource managers, planners, and other interested parties throughout the world is an integral part of the research effort of the USGS.

Fact Sheet↗
USGS2013

Trends and causes of historical wetland loss in coastal Louisiana

Wetland losses in the northern Gulf Coast region of the United States are so extensive that they represent critical concerns to government environmental agencies and natural resource managers. In Louisiana, almost 3,000 square kilometers (km 2 ) of low-lying wetlands converted to open water between 1956 and 2004, and billions of dollars in State and Federal funding have been allocated for coastal restoration projects intended to compensate for some of those wetland losses. Recent research at the St. Petersburg Coastal and Marine Science Center (SPCMSC) focused on understanding the physical processes and human activities that contributed to historical wetland loss in coastal Louisiana and the spatial and temporal trends of that loss. The physical processes (land-surface subsidence and sediment erosion) responsible for historical wetland loss were quantified by comparing marsh-surface elevations, water depths, and vertical displacements of stratigraphic contacts at 10 study areas in the Mississippi River delta plain and 6 sites at Sabine National Wildlife Refuge (SNWR) in the western chenier plain. The timing and extent of land loss at the study areas was determined by comparing historical maps, aerial photographs, and satellite imagery; the temporal and spatial trends of those losses were compared with historical subsidence rates and hydrocarbon production trends.

Louisiana↗
USGS2021

Quantifying slopes as a driver of forest to marsh conversion using geospatial techniques: Application to Chesapeake Bay coastal-plain, USA

Coastal salt marshes, which provide valuable ecosystem services such as flood mitigation and carbon sequestration, are threatened by rising sea level. In response, these ecosystems migrate landward, converting available upland into salt marsh. In the coastal-plain surrounding Chesapeake Bay, United States, conversion of coastal forest to salt marsh is well-documented and may offset salt marsh loss due to sea level rise, sediment deficits, and wave erosion. Land slope at the marsh-forest boundary is an important factor determining migration likelihood, however, the standard method of using field measurements to assess slope across the marsh-forest boundary is impractical on the scale of an estuary. Therefore, we developed a general slope quantification method that uses high resolution elevation data and a repurposed shoreline analysis tool to determine slope along the marsh-forest boundary for the entire Chesapeake Bay coastal-plain and find that less than 3% of transects have a slope value less than 1%; these low slope environments offer more favorable conditions for forest to marsh conversion. Then, we combine the bay-wide slope and elevation data with inundation modeling from Hurricane Isabel to determine likelihood of coastal forest conversion to salt marsh. This method can be applied to local and estuary-scale research to support management decisions regarding which upland forested areas are more critical to preserve as available space for marsh migration.

Delaware, Maryland, Virginia↗
USGS1989

Habitat suitability criteria for assessment of instream flow needs of fish

In the western portion of the United States, competition for stream water gas often been fierce. Water resource management agencies in the southeastern United States, where water has been relatively abundant, are not being faced with similar competing demands for water, and with increasing pressures to develop and defend recommendations for protecting fish and invertebrates in streams. Streamflow depletion at any time can result in severe long-term effects on fish populations(Peters, 1982). The allocation of stream water to any numerous instream or offstream uses is tied to the issues of water quantity, quality, and timing, which center on two critical questions: (1)when and how much water of an acceptable quality should be left in a stream, and (2) what happens if flow regimes are changed? Answers to these questions will probably be complex, but reliable answers are needed to protect instream and offstream values. If instream flow interests expect to compete with offstream uses for limited water supplies, they must be able to determine reliable and defensible methods for determining instream flow needs and demonstrate the environmental consequences of altered flow regimes. My objectives in this paper are: (a) to present an overview of the need, development, and use of stream habitat suitability criteria, and the use of these criteria for the assessment of instream flow needs; (b) to give a status report on the plan of the National Ecology Research Center (NERC) for expansion of instream flow research in the Southeast; and (c) to discuss the relevancy of the research to river corridor management.

Book↗
USGS1995

Acidic deposition ("acid rain")

Acidic deposition, or "acid rain," describes any form of precipitation, including rain, snow, and fog, with a pH of 5.5 or below (Note: pH values below 7 are acidic; vinegar has a pH of 3). It often results when the acidity of normal precipitation is increased by sulfates and nitrates that are emitted into the atmosphere from burning fossil fuels. This form of airborne contamination is considered harmful, both directly and indirectly, to a host of plant and animal species. Although acid rain can fall virtually anywhere, ecological damages in environmentally sensitive areas downwind of industrial and urban emissions are a major concern. This includes areas that have a reduced capacity to neutralize acid inputs because of low alkalinity soils and areas that contain species with a low tolerance to acid conditions. To determine the distribution of acidic deposition and evaluate its biological effects, research and monitoring are being conducted by the federal government with support from states, universities, and private industry. The national extent of the acid rain problem has been estimated by sampling water from 3,000 lakes and 500 streams (Irving 1991), representing more than 28,000 lakes and 56,000 stream reaches with a total of 200,000 km (125,000 mi). Some particularly sensitive areas, such as the Adirondack Mountain region, have been more intensively sampled and the biota examined in detail for effects from acidity. To identify trends in aquatic ecosystems, present and historical survey data on water chemistry and associated biota are compared. In lakes, the chemical and biological history and pH trends may be inferred or reconstructed in some cases by examining assemblages of fossil diatoms and aquatic invertebrates in the sediment layers. In terrestrial ecosystems, vegetation damage is surveyed and effects of acidic deposition to plants and animals are determined from laboratory and field exposure experiments. Natural variation in populations and the complex interactions between acidity and other ecosystem components make it difficult to extend many of the research findings to populations or communities. Acidity can also modify ecosystem processes such as decomposition and the flow of nutrients. Therefore, models are often used to predict such effects by combining information on individual species' effects, population distributions, and the patterns and amounts of acidic deposition.

Book chapter↗
USGS2006

Introduction to ‘Antarctic climate evolution: View from the margin’

This special issue on “Antarctic Climate Evolution—view from the margin” presents results from modelling studies and reports on geoscience data aimed at improving our understanding of the behaviour of the Antarctic ice sheet and the climate of the region. This research field is of interest because of the sensitivity of the polar regions to global warming, and because of the influence of the Antarctic ice sheet on global sea level and climate through most if not all of the Cenozoic Era. The Antarctic ice sheet both responds to and forces changes on global climate and sea level. We need to be aware of the scale and frequency of these changes if we are to understand past patterns of environmental change elsewhere on earth. It was only three decades ago that we discovered from strata drilled in shelf basins on the Antarctic margin that the Antarctic ice sheet had a history that predated the Quaternary ice ages by over 20 million years ( Hayes et al., 1975 ). Later that year the first interpretation of Antarctic glacial history through the Cenozoic Era from oxygen isotopes, recorded in foraminifera from deep-sea sediment cores, was published ( Shackleton and Kennett, 1975 ). Revisions with a more extensive database have modified the story a little ( Miller et al., 1987 , Zachos et al., 2001 ), and there have been recent attempts to resolve the temperature–ice volume ambiguity ( Lear et al., 2000 ). However, reports on strata drilled on the Antarctic margin have unambiguously shown the character of this huge ice sheet, which was oscillating in the Oligocene ( Barrett et al., 1987 , Barrett, 1999 ) with a period and magnitude comparable with the Northern Hemisphere ice sheets of the Quaternary ( Naish et al., 2001a , Naish et al., 2001b ). In this issue we present further research on the history of the Antarctic ice sheet from Oligocene to recent times, most of them from the Antarctic margin, but with some on the nature of the deep-sea isotope record, and others using recently developed modeling techniques to investigate the influence of atmosphere, ocean and biosphere on past Antarctic climate. This special issue is the third in three years on the theme of Antarctic Climate Evolution. The first followed a workshop in Erice, Sicily, in 2001 to report on results from ANTOSTRAT, a SCAR-sponsored project for gathering and analysing circum-Antarctic seismic data for planning and promoting offshore drilling for climate history. The introduction to that issue (Florindo et al., 2003) provides a review of the recent history of circum-Antarctic drilling by the Ocean Drilling Program (Legs 113, 114, 119, 120, 177, 178, 188 and 189) and the Cape Roberts Project. For a more comprehensive review of earlier drilling in the Ross Sea region (Deep Sea Drilling Project Leg 28, Dry Valley Drilling Project, McMurdo Sound Sediment and Tectonic Studies, Cenozoic Investigations in the western Ross Sea) see Hambrey and Barrett (1993). The first of these issues (Florindo et al., 2003) featured a global plate reconstruction of the Southern Hemisphere through Cenozoic time with emphasis on evolution of Cenozoic seaways (Lawver and Gahagan, 2003) along with a study of the inception and early evolution of the EAIS using a new coupled global climate (GCM)–dynamic ice sheet model (DeConto and Pollard, 2003b), as well as data from recent drilling around the margin covering time period from Cretaceous to the present. A second special issue on the same theme (Florindo et al., 2005) also featured a mix of modelling and data papers with a focus on the Eocene–Oligocene boundary and the initiation of ice sheet growth, including a pioneering attempt to evaluate the relative influence of fluvial versus glacial processes in shaping the landscape of the Prydz Bay sector of Antarctica (Jamieson et al., 2005). The remainder of the issue comprised further papers on seismic stratigraphy and reports from drilling around the margin. The papers to be found in this special issue, like the previous two, maintain the mix of modelling- and data-oriented papers that reflect the range of this research.

Palaeogeography, Palaeoclimatology, Palaeoecology↗
USGS2026

Small creatures, big challenge: A review of current knowledge and assessment of research needs to inform water withdrawal management for the Duck River's freshwater mussel fauna

The Duck River is a remarkable national resource, boasting outstanding biodiversity (Ahlstedt et al. 2017). It contains 151 fish species, over 60 mussel species, and 22 snail species, many of which are federally listed (Etnier and Starnes 1993; Johnson et al. 2013; Ahlstedt et al. 2017; Womble and Rosenberger 2025a). The Duck River watershed is at a pivotal time in its management and ecological history due to significant growth in human population and economic activity. The consequent increase in surface water demand presents challenges for sustainable water resource management. The Tennessee Department of Environment and Conservation (TDEC) has permitted or proposed to permit eight water utilities to withdraw over 77 million gallons per day (mgd) from the Duck River, representing > 40% increase from previously permitted amounts (USFWS 2025). On November 20, 2024, Tennessee Governor Bill Lee signed Executive Order No 108 to ensure long-term stability of the Duck River watershed through balancing economic growth, water resource management, and environmental conservation. Some primary components of this plan are the creation of a Comprehensive Regional Drought Management Plan, the development of a Habitat Conservation Plan, and the establishment of the Duck River Watershed Planning Partnership (DRWPP). Although the planning partnership is not focused on a sole aspect of the Duck River, but the watershed as a whole, the mussel assemblages of the Duck River have been a particular focus due to their importance in providing ecosystem services, sensitivity to water quality, conservation status, and sensitivity to periodic drought conditions in this system. With multiple state and federal agencies involved in managing the Duck River’s unique water resources, a focused review on how future water management could affect the freshwater mussel communities in the Duck River will contribute to this process. Our objectives of this review are to: 1. Review the effects of changing flow regimes on mussels, with emphasis on the effect of droughts/low flows, highlighting key processes/factors affecting mussels. 2. Highlight critical data gaps that could allow future, evidence-based water management decisions in this system. 3. Propose research topics to address critical data gaps and enable evidence-based water management decisions that consider the needs of freshwater mussels. Freshwater mussels are a critical component of riverine ecosystems, providing ecosystem services including water filtration, nutrient cycling, and habitat provision (Vaughn et al. 2004; Haag 2012) that benefit human communities. Environmental flows, also referred to as ecological or e-flows, refer to the quantity, timing, and quality of water flows necessary to maintain the ecological health of rivers, wetlands, and other aquatic ecosystems (Acreman and Dunbar 2004; Acreman 2016). For freshwater mussels, environmental flows include maintaining a flow regime and associated water quality regimes that are favorable for both juveniles and adults while also seasonally supporting host fish and the survival of settling glochidia (i.e., larval mussels) in suitable environments (Gates et al. 2015). Freshwater mussels are adapted to the natural flow regime of their native streams, including seasonal variability in flows. As sedentary filter feeders, mussels require adequate water flow to provide oxygen and food (Allen and Vaughn 2009); however, they also require periods of low flow to increase access to fish hosts and to ensure juveniles are not displaced (Gates et al 2015). Mussels are sensitive to water quality conditions, including pollutants, sedimentation, and artificial alterations of temperature and pH (Strayer and Malcom 2012). Mussel community characteristics, including presence, abundance, and species richness, generally increase with stream size (e.g., stream order); however, responses to changes in flow conditions are often species-specific, and the magnitude and timing of extreme flow conditions have more predictive power for mussel community response than general changes in flow (Lopez and Vaughn 2021). Complex hydraulic variables, such as relative shear stress and Reynolds number, can be strong predictors of mussel community responses because they combine simple hydraulic variables (e.g., velocity, depth) with stream channel characteristics, such as substrate composition and dynamics. Droughts directly and indirectly affect mussels by influencing their physiology, behavior, reproduction, and ecosystem roles. Mass mussel die-offs during droughts and low water conditions are widely documented (Vaughn et al. 2015; Sousa et al. 2018; Dubose et al. 2019). Droughts can also lead to a shift in mussel community composition, with drought-tolerant species becoming more dominant while more sensitive species experience declines (Galbraith et al, 2010; Lopez et al. 2022; Vaughn and Atkinson 2025). Droughts affect mussels through direct mortality from stranding as well as physiological stress from altered water temperature and quality, reduced habitat and food availability and quality, increased predation and competition, disruption of reproductive cycles, and increased susceptibility to disease and pathogens. Although the effects of droughts, water withdrawals, and low flow conditions on mussels are an increasing area of study, there is a general paucity of data-driven consensus regarding optimal mitigation approaches and strategies (Cushway et al. 2024). Long-term management decisions regarding water withdrawals, particularly during extended or multi-year drought conditions, may consider factors beyond direct mortality such as the sublethal effects of drought and low flow conditions on freshwater mussels for a comprehensive understanding of the effects of prolonged low flows on freshwater mussels and aquatic communities.

Tennessee↗
USGS2011

Natural resource mitigation, adaptation and research needs related to climate change in the Great Basin and Mojave Desert

This report synthesizes the knowledge, opinions, and concerns of many Federal and State land managers, scientists, stakeholders, and partners from a workshop, held at the University of Nevada, Las Vegas, on April 20-22, 2010. Land managers, research scientists, and resource specialists identified common concerns regarding the potential effects of climate change on public lands and natural resources in the Great Basin and Mojave Desert and developed recommendations for mitigation, adaptation, and research needs. Water and, conversely, the effects of drought emerged as a common theme in all breakout sessions on terrestrial and aquatic species at risk, managing across boundaries, monitoring, and ecosystem services. Climate change models for the southwestern deserts predict general warming and drying with increasing precipitation variability year to year. Scientists noted that under these changing conditions the past may no longer be a guide to the future in which managers envision increasing conflicts between human water uses and sustaining ecosystems. Increasing environmental stress also is expected as a consequence of shifting ecosystem boundaries and species distributions, expansion of non-native species, and decoupling of biotic mutualisms, leading to increasingly unstable biologic communities. Managers uniformly expressed a desire to work across management and agency boundaries at a landscape scale but conceded that conflicting agency missions and budgetary constraints often impede collaboration. More and better science is needed to cope with the effects of climate change but, perhaps even more important is the application of science to management issues using the methods of adaptive management based on long-term monitoring to assess the merits of management actions. Access to data is essential for science-based land management. Basic inventories, spatial databases, baseline condition assessments, data quality assurance, and data sharing were identified as top information priorities by all participants at this workshop. Optimizing the utility of ecosystem monitoring data will require standardizing monitoring protocols across agencies. Better communication among researchers and managers and cooperation through partnerships to manage resources across boundaries were emphasized as necessary for adapting to changing climatic conditions. However, even these strategies may be insufficient unless policy mandates, agency missions, and funding are coordinated at a high level.

Scientific Investigations Report↗
USGS2019

Microbial associations of four species of algal symbiont-bearing Foraminifers from the Florida Reef Tract, USA

While microbiome research is a rapidly expanding field of study, relatively little is known of the microbiomes associated with Foraminifera. This preliminary study investigated microbes associated with four species of Foraminifera, representing two taxonomic orders, which host three kinds of algal endosymbionts. A major objective was to explore potential influences on the microbiome composition, including phylogenetic relatedness among the host species, similarities in algal symbionts hosted, and environmental conditions from which the specimens were collected. Samples examined from two locations along the middle Florida Keys reef tract included 45 foraminiferal specimens and four environmental samples. Bacterial DNA extraction from individual specimens was followed by amplification and amplicon sequencing of the V4 variable region of the 16S rRNA gene; results were obtained from 21 specimens. The Order Miliolida, Family Soritidae, was represented by 5–8 specimens of each of three species: Archaias angulatus and Cyclorbiculina compressa , which both host chlorophyte symbionts, and Sorites orbiculus , which hosts dinoflagellate symbionts. Three Ar. angulatus specimens from which the microbiome was successfully sequenced shared 177 OTUs. Six C. compressa specimens successfully sequenced shared 58 OTUs, of which 31 were also shared by the three specimens of Ar. angulatus . Four successfully sequenced S. orbiculus specimens shared 717 unique OTUs. The 13 soritid specimens shared 26 OTUs, 23 of which represented Proteobacteria, predominantly of the bacterial family Rhodobacteraceae. The fourth foraminiferal species, Amphistegina gibbosa (Order Rotaliida) hosts diatom endosymbionts. Bacterial DNA extraction was attempted on 16 Am. gibbosa , including both normal-appearing and partly-bleached specimens. Only six OTUs, four of which represented Proteobacteria, were found in all eight specimens successfully sequenced. The partly bleached specimens shared nearly twice as many unique microbial OTUs (32) as the normal-appearing specimens (19). All Am. gibbosa specimens shared only four microbial OTUs with the soritid species, three of which may have been contaminants, indicating minimal commonality between the microbiomes of Am. gibbosa and the soritid taxa.

Florida↗
USGS2016

Toward more realistic projections of soil carbon dynamics by Earth system models

Soil carbon (C) is a critical component of Earth system models (ESMs), and its diverse representations are a major source of the large spread across models in the terrestrial C sink from the third to fifth assessment reports of the Intergovernmental Panel on Climate Change (IPCC). Improving soil C projections is of a high priority for Earth system modeling in the future IPCC and other assessments. To achieve this goal, we suggest that (1) model structures should reflect real-world processes, (2) parameters should be calibrated to match model outputs with observations, and (3) external forcing variables should accurately prescribe the environmental conditions that soils experience. First, most soil C cycle models simulate C input from litter production and C release through decomposition. The latter process has traditionally been represented by first-order decay functions, regulated primarily by temperature, moisture, litter quality, and soil texture. While this formulation well captures macroscopic soil organic C (SOC) dynamics, better understanding is needed of their underlying mechanisms as related to microbial processes, depth-dependent environmental controls, and other processes that strongly affect soil C dynamics. Second, incomplete use of observations in model parameterization is a major cause of bias in soil C projections from ESMs. Optimal parameter calibration with both pool- and flux-based data sets through data assimilation is among the highest priorities for near-term research to reduce biases among ESMs. Third, external variables are represented inconsistently among ESMs, leading to differences in modeled soil C dynamics. We recommend the implementation of traceability analyses to identify how external variables and model parameterizations influence SOC dynamics in different ESMs. Overall, projections of the terrestrial C sink can be substantially improved when reliable data sets are available to select the most representative model structure, constrain parameters, and prescribe forcing fields.

Global Biogeochemical Cycles↗