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Mammal inventories for eight National Parks in the Southern Colorado Plateau Network

Historically, the Colorado Plateau has been the subject of many geological and biological explorations. J. W. Powell explored and mapped the canyon country of the Colorado River in 1869 (Powell 1961). C. H. Merriam, V. Bailey, M. Cary, and other employees of the Bureau of Biological Survey conducted biological explorations of the area in the late 1800s. In recent times, researchers such as S. D. Durrant (1952), Durrant and Robinson (1962), D. M. Armstrong (1972), J. S. Findley et al. (1975), D. F. Hoff meister (1986), and J. Fitzgerald et al. (1994) have made considerable contributions to our understanding of the fauna of the Colorado Plateau. Despite earlier efforts, biological details on many regions of the plateau have remained insufficiently explored. In an effort to gather valuable biological information, the National Park Service (NPS) initiated a nationwide program to inventory vascular plants and vertebrates on NPS lands (Stuart 2000). The U.S. Geological Survey, Fort Collins Science Center, Arid Lands Field Station became a cooperator on this effort in 2001, when we began mammalian inventories on five parks within the NPS Southern Colorado Plateau Network (SCPN): Aztec Ruins National Monument (AZRU), El Morro National Monument (ELMO), Petroglyph National Monument (PETR), Salinas Pueblo Missions National Monument (SAPU), and Yucca House National Monument (YUHO). Existing baseline data on mammalian occurrences in these parks varied from very sparse to moderate, with little information available for most parks. In most cases, information was insufficient to assess the status of species of local concern. A final report on inventory efforts on these five parks was submitted in February 2004 (Bogan et al. 2004). In 2003, biologists from the Arid Lands Field Station began work on three additional parks in the SCPN: Bandelier National Monument (BAND), Chaco Culture National Historical Park (CHCU), and El Malpaís National Monument (ELMA). The primary emphasis at these three parks was on nonvolant mammals, as personnel from the Field Station had worked earlier on bats at all three parks (Bogan et al. 1998, Valdez et al. 2002a, 2002b). A final report on inventories at these three parks was submitted in April 2005. This publication details fieldwork conducted in all eight parks from 2001–2004. The information that appears here was originally contained in two separate reports that have been combined in order to make it easier for readers to find information on SCPN mammal inventories. To remain faithful to the original reports, and because of slightly differing objectives, personnel, and emphases at the two sets of parks, we have generally presented the methods, results, and recommendations separately for the 5-park and 3-park inventories.

Natural Resource Technical Report↗

Simulation of Surface-Water Conditions in the Nontidal Passaic River Basin, New Jersey

The Passaic River Basin, the third largest drainage basin in New Jersey, encompasses 950 mi2 (square miles) in the highly urbanized area outside New York City, with a population of 2 million. Water quality in the basin is affected by many natural and anthropogenic factors. Nutrient loading to the Wanaque Reservoir in the northern part of the basin is of particular concern and is caused partly by the diversion of water at two downstream intakes that is transferred back upstream to refill the reservoir. The larger of these diversions, Wanaque South intake, is on the lower Pompton River near Two Bridges, New Jersey. To support the development of a Total Maximum Daily Load (TMDL) for nutrients in the nontidal part of the basin (805 mi2), a water-quality transport model was needed. The U.S. Geological Survey, in cooperation with the New Jersey Department of Environmental Protection and New Jersey EcoComplex, developed a flow-routing model to provide the hydraulic inputs to the water-quality model. The Diffusion Analogy Flow model (DAFLOW) described herein was designed for integration with the Water Quality Analysis Simulation Program (WASP) watershed water-quality model. The flow routing model was used to simulate flow in 108 miles of the Passaic River and major tributaries. Flow data from U.S. Geological Survey streamflow-gaging stations represent most of the model's upstream boundaries. Other model inputs include estimated flows for ungaged tributaries and unchanneled drainage along the mainstem, and reported flows for major point-source discharges and diversions. The former flows were calibrated using the drainage-area ratio method. The simulation extended over a 4+ year period representing a range in flow conditions. Simulated channel cross-sectional geometry in the DAFLOW model was calibrated using several different approaches by adjusting area and top width parameters. The model also was calibrated to observed flows for water year 2001 (low flow) at five mainstem gaging stations and one station at which flow was estimated. The model's target range was medium to low flows--the range of typical intake operations. Simulated flow mass balance, hydrographs (flood-wave speed, attenuation, and spread), flow-duration curves, and velocity and depth values were compared to observed counterparts. Mass balance and hydrograph fit were evaluated quantitatively. Simulation results generally were within the accuracy of the flow data at the measurement stations. The model was validated to observed flows for water years 2000 (average flow), 2002 (extreme low flow), and 2003 (high flow). Results for 19 of 20 comparisons indicate average mass-balance and model-fit errors of 6.6 and 15.7 percent, respectively, indicating that the model reasonably represents the time variation of streamflow in the nontidal Passaic River Basin. An algorithm (subroutine) also was developed for DAFLOW to simulate the hydraulic mixing that occurs near the Wanaque South intake upstream from the confluence of the Pompton and Passaic Rivers. The intake draws water from multiple sources, including effluent from a nearby wastewater-treatment plant, all of which have different phosphorus loads. The algorithm determines the proportion of flow from each source and operates within a narrow flow range. The equations used in the algorithm are based on the theory of diffusion and lateral mixing in rivers. Parameters used in the equations were estimated from limited available local flow and water-quality data. As expected, simulation results for water years 2000, 2001, and 2003 indicate that most of the water drawn to the intake comes from the Pompton River; however, during many short periods of low flow and high diversion, particularly in water year 2002, entrainment of the other flow sources compensated for the insufficient flow in the Pompton River. As additional verification of the flow model used in the water-quality model, a Branched Lagrangian Transport Model (B

Scientific Investigations Report↗

Analysis of water use associated with hydraulic fracturing and determination of baseline water quality in watersheds within the shale play of eastern Ohio, 2021–23

The U.S. Geological Survey, in cooperation with the Ohio Department of Natural Resources, performed a two-part study to (1) assess water use and temporal trends and changes in streamflow, and to (2) characterize 2021–23 baseline water quality, as they relate to oil and gas extraction activities in selected eastern Ohio watersheds. Between calendar years 2010 and 2019, hydraulic fracturing water withdrawals totaling about 27,168 million gallons were reported at 643 locations in Ohio. In 2021, wells developed with hydraulic fracturing were the source of most of the oil and gas produced in Ohio. Daily streamflow time-series data from seven study gages and two reference gages were used to assess temporal trends and changes in streamflow. The study gages were in basins with reported water withdrawals for hydraulic fracturing. The reference gages, which have long periods of record and were subject to minimal streamflow regulation, were in nearby basins with no hydraulic fracturing water withdrawals. Trend slopes for the period of record annual minimum and median daily streamflows and for annual daily streamflow nonexceedance probabilities less than 0.9 were all uniformly positive at the study and reference gages. This trend indicates a consistently increasing pattern over the periods of record, except for high flows. In addition, analyses of annual streamflow statistics showed no general indication that low flows or extreme low flows at the reference or study gages have lowered, become more frequent, or lengthened in duration since 2010, when records for hydraulic fracturing water withdrawals began in Ohio. In fact, in almost all cases, the opposite was indicated. Nonexceedance percentiles of daily streamflows were compared between the full and pre-2012 periods of record for reference and study gages. The streamflows associated with nonexceedance percentiles in the lower quartile of daily streamflows determined for the full period of record were larger than or equal to those determined for the pre-2012 period of record for all study and reference gages. This indicates that low flows did not decrease during the post-2011 period of record when water was withdrawn for hydraulic fracturing. Water-quality data were collected eight times at each of eight sampling sites (six of which were colocated with the study gages). Sampling was done during a variety of flow conditions to assess baseline water quality. In 2021, the 8 sampling sites had drainage basins that were wholly or partially within 7 of the 10 most active counties in Ohio for oil and gas development. As part of the record of baseline conditions, water-quality data were used to assess (1) water types based on major-ion chemistry; (2) sources of salinity to streams; (3) exceedances of aquatic life use criteria; and (4) the correlations between water chemistry and drainage-basin characteristics, such as density of oil and gas wells, density of wastewater treatment plants, or the percentage of different types of land cover (agriculture, developed, forest). Seven of the water-quality sampling sites were designated as coal-mine impacted based on criteria developed for assessing mine-drainage impacts in Ohio. Mine drainage from historical coal mining in the region likely affected the quality of these streams and complicated the use of some constituents typically used as indicators of oil and gas influence. Based on major-ion chemistry, three main types of water were in the study area―sulfate (three sites), calcium-bicarbonate (one site), and mixed bicarbonate-chloride (four sites) type waters. One site had samples with a higher proportion of sodium and chloride ions than other stream samples, indicating potential contamination with oil-field brine or road salt. Binary mixing curves revealed that 11 samples from 4 of the sampling sites likely contained a component of brine. The results of the baseline assessment of surface-water quality in the study area showed no exceedances of Ohio Environmental Protection Agency aquatic life use criteria. Spearman’s rank correlation coefficients indicated no significant positive correlations with the density of vertical or horizontal oil and gas wells.

Ohio↗

National assessment of hurricane-induced coastal erosion hazards: Southeast Atlantic Coast

Beaches serve as a natural barrier between the ocean and inland communities, ecosystems, and natural resources. However, these dynamic environments move and change in response to winds, waves, and currents. During extreme storms, changes to beaches can be large, and the results are sometimes catastrophic. Lives may be lost, communities destroyed, and millions of dollars spent on rebuilding. During storms, large waves may erode beaches, and high storm surge shifts the erosive force of the waves higher on the beach. In some cases, the combined effects of waves and surge may cause overwash or flooding. Building and infrastructure on or near a dune can be undermined during wave attack and subsequent erosion. During Hurricane Ivan in 2004, a five-story condominium in Orange Beach, Alabama, collapsed after the sand dune supporting the foundation eroded. The September 1999 landfall of Hurricane Dennis caused erosion and undermining that destroyed roads, foundations, and septic systems. Waves overtopping a dune can transport sand inland, covering roads and blocking evacuation routes or emergency relief. If storm surge inundates barrier island dunes, currents flowing across the island can create a breach, or new inlet, completely severing evacuation routes. Waves and surge during the 2003 landfall of Hurricane Isabel left a 200-meter (m) wide breach that cut the only road to and from the village of Hatteras, N.C. Extreme coastal changes caused by hurricanes may increase the vulnerability of communities both during a storm and to future storms. For example, when sand dunes on a barrier island are eroded substantially, inland structures are exposed to storm surge and waves. Absent or low dunes also allow water to flow inland across the island, potentially increasing storm surge in the back bay, on the soundside of the barrier, and on the mainland. During Hurricane Isabel the protective sand dunes near the breach were completely eroded, increasing vulnerability to future storms.

North Carolina;South Carolina;Georgia;Florida↗

National assessment of hurricane-induced coastal erosion hazards: Mid-Atlantic Coast

Beaches serve as a natural buffer between the ocean and inland communities, ecosystems, and natural resources. However, these dynamic environments move and change in response to winds, waves, and currents. During extreme storms, changes to beaches can be large, and the results are sometimes catastrophic. Lives may be lost, communities destroyed, and millions of dollars spent on rebuilding. During storms, large waves may erode beaches, and high storm surge shifts the erosive force of the waves higher on the beach. In some cases, the combined effects of waves and surge may cause overwash (when waves and surge overtop the dune, transporting sand inland) or flooding. Building and infrastructure on or near a dune can be undermined during wave attack and subsequent erosion. During Hurricane Ivan in 2004, a five-story condominium in Orange Beach, Alabama, collapsed after the sand dune supporting the foundation eroded. Hurricane Sandy, which made landfall as an extra-tropical cyclone on October 29, 2012, caused erosion and undermining that destroyed roads, boardwalks, and foundations in Seaside Heights, New Jersey. Waves overtopping a dune can transport sand inland, covering roads and blocking evacuation routes or emergency relief. If storm surge inundates barrier island dunes, currents flowing across the island can create a breach, or a new inlet, completely severing evacuation routes. Waves and surge during Hurricane Sandy, which made landfall on October 29, 2012, left a breach that cut the road and bridge to Mantoloking, N.J. Extreme coastal changes caused by hurricanes may increase the vulnerability of communities both during a storm and to future storms. For example, when sand dunes on a barrier island are eroded substantially, inland structures are exposed to storm surge and waves. Absent or low dunes also allow water to flow inland across the island, potentially increasing storm surge in the back bay, on the soundside of the barrier, and on the mainland.

New York;New Jersey;Delaware;Maryl;Virginia↗

Drivers of seedling establishment success in dryland restoration efforts

Restoration of degraded drylands is urgently needed to mitigate climate change, reverse desertification and secure livelihoods for the two billion people who live in these areas. Bold global targets have been set for dryland restoration to restore millions of hectares of degraded land. These targets have been questioned as overly ambitious, but without a global evaluation of successes and failures it is impossible to gauge feasibility. Here we examine restoration seeding outcomes across 174 sites on six continents, encompassing 594,065 observations of 671 plant species. Our findings suggest reasons for optimism. Seeding had a positive impact on species presence: in almost a third of all treatments, 100% of species seeded were growing at first monitoring. However, dryland restoration is risky: 17% of projects failed, with no establishment of any seeded species, and consistent declines were found in seeded species as projects matured. Across projects, higher seeding rates and larger seed sizes resulted in a greater probability of recruitment, with further influences on species success including site aridity, taxonomic identity and species life form. Our findings suggest that investigations examining these predictive factors will yield more effective and informed restoration decision-making.

Nature Ecology and Evolution↗

Geology and ground-water hydrology of the Mokelumne area, California

The Mokelumne River basin of central California comprises portions of the California Trough and the Sierra Nevada section of the Pacific Mountain system. The California Trough is divisible into four subsections-the Delta tidal plain, the Victor alluvial plain, tlie river flood plains and channels, and the Arroyo Seco dissected pediment. These four subsections comprise the land forms produced by the Mokelumne River and other streams since the Sierra Nevada attained its present height in the Pleistocene epoch. The Victor alluvial plain rises eastward from the Delta plain and abuts on the dissected Arroyo Seco pediment; in the Mokelumne area it is 12 to 16 miles wide and slopes between 5 and 8 feet in a mile. It includes relatively extensive tracts that are intensively cultivated and irrigated with water pumped from wells. The Victor plain has been compounded of overlapping alluvial fans along the western base of the Sierra Nevada. It is prolonged eastward into the pediment by tongues of alluvium along several of the present streams; thus it seems likely that the present stream pattern in the eastern part of the area has been fixed since dissection of the pediment began. Three of the four major streams-the Mokelumne and Cosumnes Rivers and Dry Creek-traverse the Victor plain in trenches which are 15 to 40 feet deep at the heads of their respective alluvial fans but which die out toward the west. The floors of these trenches, the historic flood plains, are from 100 yards to a mile wide. The exceptional major stream, which has not entrenched itself, is the Calaveras River. The Arroyo Seco pediment, which lies east of the Victor plain, was initially at least 8 to 15 miles wide and lay along the western foot of the Sierra Nevada entirely .across the Mokelumne area. Its numerous remnants decline 15 to 35 feet in a mile toward the west. The Sierra Nevada section adjoins and lies east of the California Trough. Its major ridge crests define a volcanic plain whose westward slope is' inferred to have been initially about 90 feet in a mile but is now about 180 feet in a mile, owing to tilting of the Sierra Nevada block in Pleistocene time. In and near the Mokelumne area the Sierra Nevada and California Trough together are roughly coextensive with a single structural unit. The Sierra Nevada constitutes a block that has risen with respect to adjoini;ng valley areas 'by simple rotation or tilting toward the west; it has not been warped or faulted -extensively. It is inferred that this block extends westward beneath the thick alluvial deposits of the trough without material warping or faulting. The oldest rocks of the Mokelumne region are the Carboniferous and Jurassic -rocks that compose the crystalline core of the Sierra Nevada. These are overlain unconformably by sediments of Tertiary age--in upward succession the lone, Valley Springs, Mehrten, and J.Jaguna formations. Of these formations all except the lone are newly discriminated, and type sections are described in the full text. These Tertiary sediments form a great wedge, thinnest along the mountain front to the east, where they have been truncated by erosion. They dip about 2° W. The lone formation (Eocene) consists chiefly of sandstone, clay, and shale; its maximum thickness is 450 feet. The Valley Springs formation (middle? Miocene) overlies the lone formation unconformably. It is composed largely of greenish-gray clay, shale, and sandstone derived from rhyolitic ejectamenta. These rhyolitic deposits are confined to narrow channels in the higher part of the Sierra Nevada, but they spread fanlike over the lower western edge of the mountain block, where they attain a maximum thickness of 525 feet. The Mehrten formation (upper? Miocene and lower Pliocene?) comprises the andesitic rocks that constructed the Sierran volcanic plain. In the Mokelumne area it consists chiefly of sandstone and siltstone but includes, as a minor though conspicuous part of the formation, layers and tongues of resistant breccia or agglomerate, which are presumed to have originated as mud flows. Nonfragmental andesite is not known to occur in the Mokelumne area, although several possible vents occur farther east. In the eastern part of the area the Mehrten formation truncates in turn the Valley Springs and lone formations and the pre-Cretaceous rocks; in the western part the Mehrten formation (andesitic) interfingers with the underlying Valley Springs formation (rhyolitic). Its maximum measured thickness is 400 feet. Few of the irrigation wells are so deep that they can be said with assurance to reach the Mehrten formation. The Laguna formation (Pliocene? and possibly lower Pleistocene) comprises poorly sorted, nonandesitic fluviatile sedimentary that overlie the Mehrten formation. It is inferred to be essentially parallel to and tilted equally with the Mehrten formation and to be about 400 feet thick. The Arroyo Seco gravel (presumably middle Pleistocene) veneers the Arroyo Seco pediment. At its easternmost outcrops the formation is composed of pebbles, cobbles, and boulders in a matrix of brick-red sand and silt; farther west, down the slope of the pediment, it becomes pr9gressively finer. It is inferred that the Arroyo Seco gravel is a coarse fraction of the rock waste that was transported from the Sierra Nevada after the Sierran.block was tilted in Pleistocene time. It is inferred further that the correlative of the Arroyo Seco gravel in the California Trough is a wedge-shaped mass of sediments whose base is the tilted Laguna formation and whose top can be interpolated by projecting a hypothetical surface through the remnants of the pediment. The Victor formation comprises the fluviatile sand, silt, and gravel that built the Victor alluvial plain over the hypothetical equivalent of the Arroyo' Seco gravel along the axis of the California Trough and against the western front of the dissected pediment to the east. The formation is thought to be about 100 feet thick along the western margin of the Mokelumne area, according to an estimate based upon projecting the slope of the Arroyo Seco pediment westward beneath the Victor plain. The Mokelumne area lies on the fertile central plain along the Mokelumne River about the city of Lodi, in northern San Joaquin County, and has been intensively developed for the cultivation of grapes, deciduous fruits, and other crops. Of necessity its great productiveness is maintained by irrigation. Extensive irrigation from wells began about 1907 and has increased steadily until in 1932 about 50,000 acres (80 percent of the area) was watered in that manner. The specific question at issue is the extent to which the supply of ground water and hence the productiveness of the area are dependent upon the water flowing in the Mokelumne River and the extent to which that productiveness may be influenced by regulation of the stream--:in particular, by the substantial regulation of the river that is accomplished by the Pardee Dam of the East Bay Municipal Utility District, which began to function in March 1929. The depth of 1,447 irrigation wells in five townships in the central part of the area (T. 3 N., Rs. 6 and 7 E., and T. 4 N., Rs. 6 to 8 E.) ranges from 20 to 910 feet. About half the wells bottom within a 100-foot zone whose base is 75 feet below the projected Arroyo Seco pediment; essentially that zone constitutes the Victor formation. Only 6 percent of the wells bottom within the next lower 25- foot zone, but the percentage increases sharply for depths still greater; it is inferred that impervious strata are relatively persistent between 75 and 100 feet below the projected pediment and that these are the uppermost part of the Arroyo Seco gravel. Of 580 observation wells known to bottom in the Victor formation, essentially all appear to indicate a regional water-table stage; thus the water is essentially unconfined. On the other hand, nearly all wells so deep that they reach the Arroyo Seco gravel or some underlying formation tap confined water. Near the Mokelumne River the water levels in these deep wells stand below the water table, which is semiperched. In most deep wells remote from the river the water level stands above the water table except during the pumping season. Fluctuations of ground-water levels are ascribed to moving or changing load on the land surface, earthquakes, variation of barometic pressure, ground-water draft by vegetation, infiltration of rain and certain indirect effects of rainfall, infiltration of water applied to the land for irrigation, variation in the discharge of streams, and pumping from wells. In the eastern part of the central district, between Clements and the vicinity of Lockeford, it is inferred that (1) the river and the water in the alluvium of the flood plain are not insulated from the water in the sediments that form the adjacent Victor plain; (2) locally if not generally, however, there are discontinuities in pervious strata along the outer margin of the flood plain, where the water table passes from the alluvium into the enclosing sediments, so that percolation of ground water is impeded materially at that margin; (3) rising river stages set up ground-water waves that store relatively large volumes of water in the alluvium close to the river, whereas falling stages cause much of that stored water to percolate back into the river, weeks and even months lapsing before the ground-water stage becomes steady within the flood plain; and (4) seepage loss from the river into the alluvium tends to be intermittent and to alternate with seepage gain, the rate of loss or gain lagging weeks or months behind the fluctuations of river stage and lagging more for moderate changes at low stage. However, in the succeeding reach downstream as far as Woodbridge, it is inferred that percolation of ground water is not impeded generally along the outer margin of the flood plain and that the river tends to lose almost continuously by seepage rather than intermittently, although the rate of loss fluctuates somewhat in response to changing river stage. The yearly pumpage for irrigation has been as much as 114,600 acre-feet (1928- 29), and there have been as many as 2,500 wells equipped with irrigation pumping plants (1931). Commonly the wells are pumped only in daylight and are idle over week-ends and holidays, also during and after protracted rainstorms in the early part of the season. In a small district near Victor pumping in recent years has begun in January or February, has reached its height in March, and largely has passed by April. In outlying districts general pumping has begun as late as May, reached its height in June or July, and waned by September. Since 1907 the water table appears to have declined steadily in most of the Mokelumne area except along the river. The decline was least in the Woodbridge Irrigation District, where in four typical wells. the average decline from 1907 to 1937 was 3 feet, or 0.15 foot a year. Among 18 shallow wells in the district of most intensive pumping the average recession of the water table from 1907 to 1927 was 11 feet, or 0.55 foot a year; the greatest measured recession was 15 feet, or 0.75 foot a year. From 1927 to 1933 the water table declined 5 feet or more over most of the central pumping district except within 2 miles of the Mokelumne River, and the greatest measured decline was 9 feet. The area of material recession ,extends 4 to 7 miles eastward beyond the central pumping district, whence it is inferred that pumping has drawn gradually on remote ground-water storage. It is inferred that the Mokelumne River ordinarily has been a losing stream between the Mehrten dam site, near Clements, and the Woodbridge Dam, the area that received the percolate having been triangular with its upstream and having included about 5,200 acres of the flood plain and 36,500 acres in outlying districts to the north and to the south. Mean fluctuations of the water table within the area receiving percolate from ihe river are believed to indicate that relatively little water is drawn from outside the area. Accordingly, simple storage methods are competent for a ground-water inventory. It is inferred that the rate of seepage loss from the river depends jointly upon river discharge, stage in the Woodbridge Reservoir, and groundwater pumpage. The foregoing inferences lead to the following conclusions with respect to ground-water replenishment by seepage loss from the river in the intensively cultivated district about Lodi: (1) The annual replenishment has tended to increase for at least two decades, owing to the gradual increase in head between surface water and ground water as ground-water levels have been lowered progressively by pumping; (2) annual replenishment has tended to increase, especially in recent years, owing to gradually prolonged use of the Woodbridge Reservoir, for thereby a relatively large wetted area and great differential head have been maintained for an increasing term; (3) the rate of replenishment tends to be greater under regulation than under the so-called natural regimen, to the extent that regulation has maintained a moderately large wetted area and stage in the river through the later part ·of each pumping season, whi1e the ground-water levels have been lowest. Moreover, for any particular yearly run-off below the Mehrten dam site, the replenishment by seepage would tend to be greater under the regulated regimen to the extent that fluctuations in discharge were suppressed, for the greatest yearly mean stage and mean wetted area would be afforded by constant discharge. -Thus, diverting water out of the Mokelumne River Basin at the Pardee Dam does not necessari1y-entail a diminution in ground-water replenishment by seepage loss along the lower reach of the stream, at least in the replenishment beneath the Victor plain above the gaging station at Woodbridge. Rather. the Pardee Dam affords a means for so regulating the discharge as to effect a maximum ground-water replenishment with-a given run-off in the natural channel. Bodies of ground water perched above the regional water table are common in the Laguna formation, especially in its lower part. Conspicuous bodies occur about 3 miles south of Clay, in a district between 1 mile and 5 miles south of Clements, and along Dry Creek in T. 5 N., Rs. 7 and 8 E. From the relation between the water table and the piezometric surface for water confined in deep aquifers, the area receiving percolate from the Mokelumne River may be divided roughly into (1) a central area, extending not :p1ore than half a mi1e beyond the flood plain, in which the piezometric surface is inferred to have stood below the water table throughout the term of the investigation and hence in which the difference in head has favored the percolation of water from shallow beds into deep beds in all seasons, and (2) an outlying area in which the difference in head likewise favors downward percolation into deep beds during the pumping season but favors upward percolation during the nonpumping season. This outlying area includes about 75 percent of the segment of the Victor plain that receives percolate from the river. From 1927 to 1933 the subartesian head that existed during the nonpumping season in the area remote from the river tended to increase; it is therefore inferred that the relative opportunity for seasonal recharge of the shallow water-bearing beds by underfeeding has likewise tended to increase. On the other hand, the negative differential head in wells near the river also has tended to increase; thus in this central area the opportunity for discharge of water from shallow beds by downward percolation has probably tended to increase. It is believed that ground-water storage within the area near the river is not decreased materially by" discharge westward through deep pervious beds, also that the yearly addition to ground-water storage in the outlying area by deep percolation from a remote easterly source is scant and for all practical purposes is offset by downward percolation along the river.

California↗

Change in dominance determines herbivore effects on plant biodiversity

Herbivores alter plant biodiversity (species richness) in many of the world’s ecosystems, but the magnitude and the direction of herbivore effects on biodiversity vary widely within and among ecosystems. One current theory predicts that herbivores enhance plant biodiversity at high productivity but have the opposite effect at low productivity. Yet, empirical support for the importance of site productivity as a mediator of these herbivore impacts is equivocal. Here, we synthesize data from 252 large-herbivore exclusion studies, spanning a 20-fold range in site productivity, to test an alternative hypothesis—that herbivore-induced changes in the competitive environment determine the response of plant biodiversity to herbivory irrespective of productivity. Under this hypothesis, when herbivores reduce the abundance (biomass, cover) of dominant species (for example, because the dominant plant is palatable), additional resources become available to support new species, thereby increasing biodiversity. By contrast, if herbivores promote high dominance by increasing the abundance of herbivory-resistant, unpalatable species, then resource availability for other species decreases reducing biodiversity. We show that herbivore-induced change in dominance, independent of site productivity or precipitation (a proxy for productivity), is the best predictor of herbivore effects on biodiversity in grassland and savannah sites. Given that most herbaceous ecosystems are dominated by one or a few species, altering the competitive environment via herbivores or by other means may be an effective strategy for conserving biodiversity in grasslands and savannahs globally.

Nature Ecology & Evolution↗

EAARL Coastal Topography--Cape Canaveral, Florida, 2009: First Surface

These remotely sensed, geographically referenced elevation measurements of lidar-derived first-surface (FS) topography datasets were produced collaboratively by the U.S. Geological Survey (USGS), St. Petersburg Coastal and Marine Science Center, St. Petersburg, FL, and the National Aeronautics and Space Administration (NASA), Kennedy Space Center, FL. This project provides highly detailed and accurate datasets of a portion of the eastern Florida coastline beachface, acquired on May 28, 2009. The datasets are made available for use as a management tool to research scientists and natural-resource managers. An innovative airborne lidar instrument originally developed at the NASA Wallops Flight Facility, and known as the Experimental Advanced Airborne Research Lidar (EAARL), was used during data acquisition. The EAARL system is a raster-scanning, waveform-resolving, green-wavelength (532-nanometer) lidar designed to map near-shore bathymetry, topography, and vegetation structure simultaneously. The EAARL sensor suite includes the raster-scanning, water-penetrating full-waveform adaptive lidar, a down-looking red-green-blue (RGB) digital camera, a high-resolution multispectral color-infrared (CIR) camera, two precision dual-frequency kinematic carrier-phase GPS receivers, and an integrated miniature digital inertial measurement unit, which provide for sub-meter georeferencing of each laser sample. The nominal EAARL platform is a twin-engine aircraft, but the instrument was deployed on a Pilatus PC-6. A single pilot, a lidar operator, and a data analyst constitute the crew for most survey operations. This sensor has the potential to make significant contributions in measuring sub-aerial and submarine coastal topography within cross-environmental surveys. Elevation measurements were collected over the survey area using the EAARL system, and the resulting data were then processed using the Airborne Lidar Processing System (ALPS), a custom-built processing system developed in a NASA-USGS collaboration. ALPS supports the exploration and processing of lidar data in an interactive or batch mode. Modules for presurvey flight-line definition, flight-path plotting, lidar raster and waveform investigation, and digital camera image playback have been developed. Processing algorithms have been developed to extract the range to the first and last significant return within each waveform. ALPS is used routinely to create maps that represent submerged or sub-aerial topography. Specialized filtering algorithms have been implemented to determine the "bare earth" under vegetation from a point cloud of last return elevations.

Data Series↗

Latitudinal limits to the predicted increase of the peatland carbon sink with warming

The carbon sink potential of peatlands depends on the balance of carbon uptake by plants and microbial decomposition. The rates of both these processes will increase with warming but it remains unclear which will dominate the global peatland response. Here we examine the global relationship between peatland carbon accumulation rates during the last millennium and planetary-scale climate space. A positive relationship is found between carbon accumulation and cumulative photosynthetically active radiation during the growing season for mid- to high-latitude peatlands in both hemispheres. However, this relationship reverses at lower latitudes, suggesting that carbon accumulation is lower under the warmest climate regimes. Projections under Representative Concentration Pathway (RCP)2.6 and RCP8.5 scenarios indicate that the present-day global sink will increase slightly until around AD 2100 but decline thereafter. Peatlands will remain a carbon sink in the future, but their response to warming switches from a negative to a positive climate feedback (decreased carbon sink with warming) at the end of the twenty-first century.

Nature Climate Change↗

Adaptive management framework and decision support tool for invasive annual bromes in seven Northern Great Plains National Park Service units

National Park Service (NPS) units in the northern Great Plains (NGP) were established to preserve and interpret the history of the United States, protect and showcase unusual geology and paleontology, and provide a home for vanishing large wildlife. A unifying feature among these national parks, monuments, and historic sites is northern mixed-grass prairie, which not only provides background scenery and habitat but is the foundation of many park missions. As recognition of the prairie’s importance to park fundamental resources and values has grown, so too has the realization that invasive plants threaten these values by reducing native species diversity, altering food webs, and marring the visitor experience. Cheatgrass ( Bromus tectorum ) and Japanese brome ( Bromus japonicus )—collectively referred to as “annual bromes”—are of particular concern because of their documented increase through time, and their association with lower native plant diversity, in NGP parks. A variety of grazing, herbicide-application, and prescribed-fire experiments have shown promising short-term results for controlling annual bromes in research-scale plots in the NGP, but it is unclear whether these management actions will be as effective at the larger spatial and longer temporal scales relevant to park management. When uncertainties about the effectiveness of different management actions cannot be answered with traditional research approaches in time to prevent resource degradation, yet recurrent management decisions must be made, an adaptive management approach may be appropriate. Thus, in 2017, we began to develop the ABAM—Annual Brome Adaptive Management—framework. The aim of this framework is to reduce uncertainties about methods for controlling annual bromes in seven NGP parks through a formal process of learning from the application of on-going management. A uniform framework across seven parks provides greater opportunities for reducing these uncertainties compared to a single park acting alone or to multiple parks using different adaptive management frameworks. This technical report details the development and expected implementation of the ABAM framework. After briefly introducing the issue (Section 1) and describing the context in which the framework was developed (Section 2), the report describes how a structured decision-making process was used to frame the problem, determine concrete objectives, and decide the alternative actions for achieving those objectives that the framework would be designed around (Section 3). Then the report describes the process used to develop the ABAM decision support system (Section 4). At the core of this system is the ABAM decision support tool, a Bayesian decision network built on nearly two decades of vegetation monitoring data from NGP parks, as well as current literature and ABAMspecific experiments. This tool, referred to as the ABAM model by its intended users, is built to work with the existing vegetation monitoring, prescribed fire, and invasive plant management programs that support the seven ABAM parks. In Section 5, the report describes how output from the ABAM model is produced and used in annual vegetation management decision making. It describes the ABAM R package (Baldwin et al. 2021) and an example R script that leads a user through an annual workflow using the model and the package. This workflow updates the model with information from new monitoring events following management actions of prescribed fire, herbicide application, or a combination thereof. With the updated model, data describing the current condition of vegetation in park management units, and current data for environmental factors included in the model (soil texture, slope, weather, and grazing), the user then runs the model to predict future vegetation conditions—and managers’ happiness with the outcome—in response to each of 10 management actions for each management unit in each park. These predictions inform managers’ decisions regarding locations and types of management actions to apply in the upcoming year. The ABAM framework is in its infancy, and the report concludes (Section 6) with a discussion of its longer-term viability. Successful adaptive management requires commitment for the long term, likely decades. Currently, the predictions of the decision support tool are not expected to be highly accurate, but they ideally will improve over time as more management actions are applied and their outcomes are captured by monitoring. We designed the ABAM decision support tool to work with the existing management and monitoring resources in ABAM parks to maximize the sustainability of the model’s use, but the ABAM framework requires more than the model. Because this application of an adaptive management framework supported by a quantitative decision support tool to guide vegetation management is unique within the NPS (to our knowledge), institutional knowledge and mechanisms for long-term implementation of the ABAM framework do not exist within the agency. Additionally, the ABAM model and the data that inform it could be improved in a variety of ways. Thus, this report concludes with a discussion of ways to both sustain and improve upon the work completed so far.

Montana, Nebraska, South Dakota, Wyoming↗

Hydrology of Central Florida Lakes - A Primer

INTRODUCTION Lakes are among the most valued natural resources of central Florida. The landscape of central Florida is riddled with lakeswhen viewed from the air, it almost seems there is more water than land. Florida has more naturally formed lakes than other southeastern States, where many lakes are created by building dams across streams. The abundance of lakes on the Florida peninsula is a result of the geology and geologic history of the State. An estimated 7,800 lakes in Florida are greater than 1 acre in surface area. Of these, 35 percent are located in just four counties (fig. 1): Lake, Orange, Osceola, and Polk (Hughes, 1974b). Lakes add to the aesthetic and commercial value of the area and are used by many residents and visitors for fishing, boating, swimming, and other types of outdoor recreation. Lakes also are used for other purposes such as irrigation, flood control, water supply, and navigation. Residents and visitors commonly ask questions such as Whyare there so many lakes here?, Why is my lake drying up (or flooding)?, or Is my lake spring-fed? These questions indicate that the basic hydrology of lakes and the interaction of lakes with ground water and surface water are not well understood by the general population. Because of the importance of lakes to residents of central Florida and the many questions and misconceptions about lakes, this primer was prepared by the U.S. Geological Survey (USGS) in cooperation with the St. Johns River Water Management District and the South Florida Water Management District. The USGS has been collecting hydrologic data in central Florida since the 1920s, obtaining valuable information that has been used to better understand the hydrology of the water resources of central Florida, including lakes. In addition to data collection, as of 1994, the USGS had published 66 reports and maps on central Florida lakes (Garcia and Hoy, 1995). The main purpose of this primer is to describe the hydrology of lakes in central Florida, the interactions between lakes and ground- and surface-waters, and to describe how these interactions affect lake water levels. Included are descriptions of the basic geology and geomorphology of central Florida, origins of central Florida lakes, factors that affect lake water levels, lake water quality, and common methods of improving water quality. The geographic area discussed in this primer is approximate (fig. 1) and includes west and east-central Florida, extending from the Gulf of Mexico to the Atlantic Ocean coastlines, northward into Marion, Putnam, and Flagler Counties, and southward to Lake Okeechobee. The information presented here was obtained from the many publications available on lakes in central Florida, as well as from publications on Florida geology, hydrology, and primers on ground water, surface water, and water quality. Many publications are available that provide more detailed information on lake water quality, and this primer is not intended as an extensive treatise on that subject. The reader is referred to the reference section of this primer for sources of more detailed information on lake water quality. Lakes discussed in this report are identified in figure 2. Technical terms used in the report are shown in bold italics and are defined in the glossary. The classification of some water bodies as lakes is highly subjective. What one individual considers a lake another might consider a pond. Generally, any water- filled depression or group of depressions in the land surface could be considered a lake. Lakes differ from swamps or wetlands in the type and amount of vegetation, water depth, and some water-quality characteristics. Lakes typically have emergent vegetation along the shoreline with a large expanse of open water in the center. Swamps or wetlands, on the other hand, are characterized by a water surface interrupted by the emergence of many varieties of plant life, from saw grasses to cypress trees. Lakes may be na

Circular↗

Near-field receiving water monitoring of trace metals and a benthic community near the Palo Alto Regional Water Quality Control Plant in South San Francisco Bay, California: 2008

Results reported herein include trace element concentrations in sediment and in the clam Macoma petalum (formerly reported as Macoma balthica (Cohen and Carlton, 1995)), clam reproductive activity, and benthic macroinvertebrate community structure for a mudflat one kilometer south of the discharge of the Palo Alto Regional Water Quality Control Plant (PARWQCP) in South San Francisco Bay. This report includes data collected for the period January 2008 to December 2008 and extends a critical long-term biogeochemical record dating back to 1974. These data serve as the basis for the City of Palo Alto's Near-Field Receiving Water Monitoring Program, initiated in 1994. In 2008, metal concentrations in both sediments and clam tissue were among the lowest concentrations on record and consistent with results observed since 1991. Following significant reductions in the late 1980's, silver (Ag) and copper (Cu) concentrations appeared to have stabilized. Annual mean concentrations have fluctuated modestly (2–4 fold) in a nondirectional manner. Data for other metals, including chromium, mercury, nickel, selenium, vanadium, and zinc, have been collected since 1994. Over this period, concentrations of these elements, which more likely reflect regional inputs and systemwide processes, have remained relatively constant, aside from typical seasonal variation that is common to all elements. Within years, concentrations generally reach maximum in winter months (January–March) and decline to annual minima in spring through fall. Mercury (Hg) in sediments spiked to the highest observed level in January 2008. However, sedimentary concentrations for the rest of the year and concentrations of Hg in M. petalum for the entire year were consistent with data from previous years. Average selenium (Se) concentrations in sediment were the highest on record, but there is no evidence, yet, to suggest a temporal trend of increasing sedimentary Se. Selenium in M. petalum was not elevated relative to past years. Overall, Cu and Ag concentrations in sediments and soft tissues of the clam, M. petalum , remained representative of the concentrations observed since 1991 following significant reductions in the discharge of these elements from PARWQCP, suggesting that, similar to other elements of regulatory interest, regional scale factors now largely influence sedimentary and bioavailable concentrations of Cu and Ag. Analyses of the benthic-community structure of a mudflat in South San Francisco Bay over a 31-year period show that changes in the community have occurred concurrent with reduced concentrations of metals in the sediment and in the tissues of the biosentinel clam, M. petalum , from the same area. Analysis of the reproductive activity of M. petalum shows increases in reproductive activity concurrent with the decline in metal concentrations in the tissues of this organism. Reproductive activity is presently stable, with almost all animals initiating reproduction in the fall and spawning the following spring of most years. The community has shifted from being dominated by several opportunistic species to a community where the species are more similar in abundance, a pattern that suggests a more stable community that is subjected to less stress. In addition, two of the opportunistic species ( Ampelisca abdita and Streblospio benedicti ) that brood their young and live on the surface of the sediment in tubes, have shown a continual decline in dominance coincident with the decline in metals. Heteromastus filiformis , a subsurface polychaete worm that lives in the sediment, consumes sediment and organic particles residing in the sediment, and reproduces by laying their eggs on or in the sediment, has shown a concurrent increase in dominance and is now showing signs of population stability. An unidentified disturbance occurred on the mudflat in early 2008 that resulted in the loss of the benthic animals, except for those deep dwelling animals like Macoma petalum . Animals immediately returned to the mudflat, which is indicative that the disturbance was not due to a persistent toxin or due to anoxia. This event allows us to examine the response of the mudflat benthic community to a natural disturbance (possible causes include sediment accretion or freshwater inundation) and compare this recovery to the longer term recovery we observed in the 1970s.

California↗

Barrier-island and estuarine-wetland physical-change assessment after Hurricane Sandy

Introduction The Nation’s eastern coast is fringed by beaches, dunes, barrier islands, wetlands, and bluffs. These natural coastal barriers provide critical benefits and services, and can mitigate the impact of storms, erosion, and sea-level rise on our coastal communities. Waves and storm surge resulting from Hurricane Sandy, which made landfall along the New Jersey coast on October 29, 2012, impacted the U.S. coastline from North Carolina to Massachusetts, including Assateague Island, Maryland and Virginia, and the Delmarva coastal system. The storm impacts included changes in topography, coastal morphology, geology, hydrology, environmental quality, and ecosystems. In the immediate aftermath of the storm, light detection and ranging (lidar) surveys from North Carolina to New York documented storm impacts to coastal barriers, providing a baseline to assess vulnerability of the reconfigured coast. The focus of much of the existing coastal change assessment is along the ocean-facing coastline; however, much of the coastline affected by Hurricane Sandy includes the estuarine-facing coastlines of barrier-island systems. Specifically, the wetland and back-barrier shorelines experienced substantial change as a result of wave action and storm surge that occurred during Hurricane Sandy (see also USGS photograph, http://coastal.er.usgs.gov/hurricanes/sandy/photo-comparisons/virginia.php ). Assessing physical shoreline and wetland change (land loss as well as land gains) can help to determine the resiliency of wetland systems that protect adjacent habitat, shorelines, and communities. To address storm impacts to wetlands, a vulnerability assessment should describe both long-term (for example, several decades) and short-term (for example, Sandy’s landfall) extent and character of the interior wetlands and the back-barrier-shoreline changes. The objective of this report is to describe several new wetland vulnerability assessments based on the detailed physical changes estimated from observations. The scope includes understanding changes caused by both short- and long-term processes using both remotely sensed and in situ observations to characterize changes to the wetland in terms of accretion/expansion and erosion/contraction. Accretion may be due to net vertical and (or) horizontal deposition, including estuarine-shoreline change due to overwash. Wetland erosion may be due to elevated waves and water levels in the estuary itself. We included additional information based on wave runup and storm-surge elevations based on models and elevation data. We then developed a predictive assessment for wetland vulnerability that describes the likelihood of changes of the estuarine shoreline and the landward extent of sand overwash driven by processes occurring on the ocean-facing shoreline. This assessment is intended to be linked to the beach and dune vulnerability assessments that have been developed previously.

Open-File Report↗

Near-field receiving water monitoring of trace metals and a benthic community near the Palo Alto Regional Water Quality Control Plant in south San Francisco Bay, California: 2011

Trace-metal concentrations in sediment and in the clam Macoma petalum (formerly reported as Macoma balthica), clam reproductive activity, and benthic macroinvertebrate community structure were investigated in a mudflat 1 kilometer south of the discharge of the Palo Alto Regional Water Quality Control Plant (PARWQCP) in South San Francisco Bay, Calif. This report includes the data collected by U.S. Geological Survey (USGS) scientists for the period January 2011 to December 2011. These data serve as the basis for the City of Palo Alto's Near-Field Receiving Water Monitoring Program, initiated in 1994. Following significant reductions in the late 1980s, silver (Ag) and copper (Cu) concentrations in sediment and M. petalum appear to have stabilized. Data for other metals, including chromium, mercury, nickel, selenium, and zinc, have been collected since 1994. Over this period, concentrations of these elements have remained relatively constant, aside from seasonal variation that is common to all elements. In 2011, concentrations of Ag and Cu in M. petalum varied seasonally in response to a combination of site-specific metal exposures and annual growth and reproduction, as reported previously. Seasonal patterns for other elements, including Cr, Hg, Ni, Se, and Zn, were generally similar in timing and magnitude as those for Ag and Cu. In 2011, metal concentrations in both sediments and clam tissue were among the lowest concentrations on record. This record suggests that regional-scale factors now largely control sedimentary and bioavailable concentrations of Ag and Cu, as well as other elements of regulatory interest, at the Palo Alto site. Analyses of the benthic community structure of a mudflat in South San Francisco Bay over a 38-year period show that changes in the community have occurred concurrent with reduced concentrations of metals in the sediment and in the tissues of the biosentinel clam, M. petalum, from the same area. Analysis of the M. petalum community shows increases in reproductive activity concurrent with the decline in metal concentrations in the tissues of this organism. Reproductive activity is presently stable (2011), with almost all animals initiating reproduction in the fall and spawning the following spring. The community has shifted from being dominated by several opportunistic species to a community where the species are more similar in abundance, a pattern that indicates a more stable community that is subjected to fewer stressors. In addition, two of the opportunistic species (Ampelisca abdita and Streblospio benedicti) that brood their young and live on the surface of the sediment in tubes have shown a continual decline in dominance coincident with the decline in metals; both species had short-lived rebounds in abundance in 2008, 2009, and 2010. Heteromastus filiformis (a subsurface polychaete worm that lives in the sediment, consumes sediment and organic particles residing in the sediment, and reproduces by laying its eggs on or in the sediment) showed a concurrent increase in dominance and, in the last several years before 2008, showed a stable population. H. filiformis abundance increased slightly in 2011. An unidentified disturbance occurred on the mudflat in early 2008 that resulted in the loss of the benthic animals, except for those deep-dwelling animals like Macoma petalum. Animals immediately returned to the mudflat in 2008, which was the first indication that the disturbance was not due to a persistent toxin or to anoxia. The reproductive mode of most species present in 2011 is reflective of the species that were available either as pelagic larvae or as mobile adults. Although egg layers were lower in number in this group, the authors hypothesize that these species will return slowly as more species move back into the area. The use of functional ecology was highlighted in the 2011 benthic community data, which show that the animals that have now returned to the mudflat are those that can respond successfully to a physical, nontoxic disturbance. Today, community data show a mix of animals that consume the sediment, filter feed, have pelagic larvae that must survive landing on the sediment, and brood their young. USGS scientists continue to observe the community's response to the 2008 defaunation event because it allows them to examine the response of the community to a natural disturbance (possible causes include sediment accretion or freshwater inundation) and compare this recovery to the long-term recovery observed in the 1970s when the decline in sediment pollutants was the dominating factor.

California↗

Vegetation classification and distribution mapping report: Mesa Verde National Park

The classification and distribution mapping of the vegetation of Mesa Verde National Park (MEVE) and surrounding environment was achieved through a multi-agency effort between 2004 and 2007. The National Park Service’s Southern Colorado Plateau Network facilitated the team that conducted the work, which comprised the U.S. Geological Survey’s Southwest Biological Science Center, Fort Collins Research Center, and Rocky Mountain Geographic Science Center; Northern Arizona University; Prescott College; and NatureServe. The project team described 47 plant communities for MEVE, 34 of which were described from quantitative classification based on f eld-relevé data collected in 1993 and 2004. The team derived 13 additional plant communities from field observations during the photointerpretation phase of the project. The National Vegetation Classification Standard served as a framework for classifying these plant communities to the alliance and association level. Eleven of the 47 plant communities were classified as “park specials;” that is, plant communities with insufficient data to describe them as new alliances or associations. The project team also developed a spatial vegetation map database representing MEVE, with three different map-class schemas: base, group, and management map classes. The base map classes represent the fi nest level of spatial detail. Initial polygons were developed using Definiens Professional (at the time of our use, this software was called eCognition), assisted by interpretation of 1:12,000 true-color digital orthophoto quarter quadrangles (DOQQs). These polygons (base map classes) were labeled using manual photo interpretation of the DOQQs and 1:12,000 true-color aerial photography. Field visits verified interpretation concepts. The vegetation map database includes 46 base map classes, which consist of associations, alliances, and park specials classified with quantitative analysis, additional associations and park specials noted during photointerpretation, and non-vegetated land cover, such as infrastructure, land use, and geological land cover. The base map classes consist of 5,007 polygons in the project area. A field-based accuracy assessment of the base map classes showed overall accuracy to be 43.5%. Seven map classes comprise 89.1% of the park vegetated land cover. The group map classes represent aggregations of the base map classes, approximating the group level of the National Vegetation Classification Standard, version 2 (Federal Geographic Data Committee 2007), and reflecting physiognomy and floristics. Terrestrial ecological systems, as described by NatureServe (Comer et al. 2003), were used as the fi rst approximation of the group level. The project team identified 14 group map classes for this project. The overall accuracy of the group map classes was determined using the same accuracy assessment data as for the base map classes. The overall accuracy of the group representation of vegetation was 80.3%. In consultation with park staff , the team developed management map classes, consisting of park-defined groupings of base map classes intended to represent a balance between maintaining required accuracy and providing a focus on vegetation of particular interest or import to park managers. The 23 management map classes had an overall accuracy of 73.3%. While the main products of this project are the vegetation classification and the vegetation map database, a number of ancillary digital geographic information system and database products were also produced that can be used independently or to augment the main products. These products include shapefiles of the locations of field-collected data and relational databases of field-collected data.

Mesa Verde National Park↗

Ground Water Atlas of the United States: Segment 7, Idaho, Oregon, Washington

The States of Idaho, Oregon, and Washington, which total 248,730 square miles, compose Segment 7 of this Atlas. The area is geologically and topographically diverse and contains a wealth of scenic beauty, natural resources, and ground and surface water that generally are suitable for all uses. Most of the area of Segment 7 is drained by the Columbia River, its tributaries, and other streams that discharge to the Pacific Ocean. Exceptions are those streams that flow to closed basins in southeastern Oregon and northern Nevada and to the Great Salt Lake in northern Utah. The Columbia River is one of the largest rivers in the Nation. The downstream reach of the Columbia River forms most of the border between Oregon and Washington. In 1990, Idaho, Oregon, and Washington had populations of 1.0 million, 2.8 million, and 4.9 million, respectively. The more densely populated parts are in lowland areas and stream valleys. Many of the mountains, the deserts, and the upland areas of Idaho, Oregon, and Washington lack major population centers. Large areas of Idaho and Oregon are uninhabited and are mostly public land (fig. 1) where extensive ground-water development is restricted. Surface water is abundant in Idaho, Oregon, and Washington, though not always available when and where needed. In some places, surface water provides much of the water used for public-supply, domestic and commercial, agricultural (primarily irrigation and livestock watering), and industrial purposes. In arid parts of Segment 7, however, surface water has long been fully appropriated, chiefly for irrigation. Ground water is used when and where surface-water supplies are lacking. Ground water is commonly available to shallow wells that are completed in unconsolidated-deposit aquifers that consist primarily of sand and gravel but contain variable quantities of clay and silt. Many large-yield public-supply and irrigation wells and thousands of domestic wells are completed in these types of aquifers, generally in areas of privately owned land (fig. 1). In many places, deeper wells produce water from underlying volcanic rocks, usually basalt. Most irrigation (fig. 2) is on lowlands next to streams and on adjacent terraces. Generally, lowlands within a few miles of a main stream are irrigated with surface water diverted by gravity flow from the main stream or a reservoir and distributed through a system of canals and ditches. In some areas, water is pumped to irrigate lands farther from the stream at a higher altitude. Along the Snake and Columbia Rivers, large pumping systems withdraw billions of gallons of water per day from the rivers to irrigate adjacent uplands that are more than 500 feet higher than the rivers. Elsewhere, irrigation water is obtained from large-capacity wells, where depth to water might exceed 500 feet below land surface. Aquifers in Idaho, Oregon, and Washington, as in most other States, differ considerably in thickness and permeability, and well yields differ accordingly. Ground-water levels in a few areas have declined as a result of withdrawals by wells. State governments have taken steps to alleviate declines in some areas by enacting programs that either limit the number of additional wells that can be completed in a particular aquifer (Ground-Water Management Area) or prevent further ground-water development (Critical Ground-Water Area). Segment 7 includes some of the driest parts of the Nation, as well as some of the wettest. Average annual precipitation (1951-80) ranges from less than 10 inches in arid parts of Idaho, Oregon, and Washington to more than 80 inches in the western parts of Oregon and Washington (fig. 3). Most storms generally move eastward through the area. The eastward-moving air absorbs the moisture that evaporates from the Pacific Ocean. As this air encounters the fronts of mountain ranges, it rises, cools, and condenses. Accordingly, the western sides of the mountain ranges receive the most precipitation. Much of the annual precipitation moves directly to streams as overland runoff. Some of the precipitation is returned to the atmosphere by evapotranspiration, which is the combination of evaporation from the surface and transpiration from the plants. A small part of the precipitation infiltrates the soil and percolates downward to recharge underlying aquifers. Average annual runoff ( 1951-80) in the segment varies considerably (fig. 4), and the distribution of the runoff generally parallels that of precipitation. In the arid and the semiarid parts of Segment 7, most precipitation replenishes soil moisture, evaporates, or is transpired by vegetation. Little is left to maintain streamflow or to recharge aquifers. In the wetter parts, much of the precipitation runs off the land surface to maintain streamflow, and because evaporation is usually less in wetter areas, more water is available to recharge aquifers. Precipitation that falls as snow generally does not become runoff until spring thaws begin. Reservoirs constructed on major streams to mitigate flooding and to store water for irrigation, hydroelectric-power generation, and recreation also affect the timing of runoff. The runoff is stored and subsequently released during drier periods to maintain downstream flow.

Idaho, Oregon, Washington↗

Near-field receiving water monitoring of trace metals and a benthic community near the Palo Alto Regional Water Quality Control Plant in south San Francisco Bay, California, 2012

Trace-metal concentrations in sediment and in the clam Macoma petalum (formerly reported as Macoma balthica), clam reproductive activity, and benthic macroinvertebrate community structure were investigated in a mudflat 1 kilometer south of the discharge of the Palo Alto Regional Water Quality Control Plant (PARWQCP) in South San Francisco Bay, Calif. This report includes the data collected by U.S. Geological Survey (USGS) scientists for the period January to December 2012. These data serve as the basis for the City of Palo Alto’s Near-Field Receiving Water Monitoring Program, initiated in 1994. Following significant reductions in the late 1980s, silver (Ag) and copper (Cu) concentrations in sediment and in M. petalum appear to have stabilized. Data for other metals, including chromium (Cr), mercury (Hg), nickel (Ni), selenium (Se), and zinc (Zn), have been collected since 1994. Over this period, concentrations of these elements have remained relatively constant, aside from seasonal variation that is common to all elements. In 2012, concentrations of Ag and Cu in M. petalum varied seasonally in response to a combination of site-specific metal exposures and annual growth and reproduction, as reported for previous time periods. Seasonal patterns for other elements, including Cr, Ni, Zn, Hg, and Se were generally similar in timing and magnitude as those for Ag and Cu. In 2012, metal concentrations in both sediments and clam tissue were among the lowest concentrations on record. This record suggests that regional-scale factors now largely control sedimentary and bioavailable concentrations of Ag and Cu, as well as other elements of regulatory interest, at the Palo Alto site. Analyses of the benthic community structure of a mudflat in South San Francisco Bay over a 39-year period show that changes in the community have occurred concurrent with reduced concentrations of metals in the sediment and in the tissues of the biosentinel clam, M. petalum, from the same area. Analysis of the M. petalum community shows increases in reproductive activity concurrent with the decline in metal concentrations in the tissues of this organism. Reproductive activity is presently stable (2012), with almost all animals initiating reproduction in the fall and spawning the following spring. The community has shifted from being dominated by several opportunistic species to a community where the species are more similar in abundance, a pattern that indicates a more stable community that is subjected to fewer stressors. In addition, two of the opportunistic species (Ampelisca abdita and Streblospio benedicti) that brood their young and live on the surface of the sediment in tubes have shown a continual decline in dominance coincident with the decline in metals; both species had short-lived rebounds in abundance in 2008, 2009, and 2010. Heteromastus filiformis (a subsurface polychaete worm that lives in the sediment, consumes sediment and organic particles residing in the sediment, and reproduces by laying its eggs on or in the sediment) showed a concurrent increase in dominance and, in the last several years before 2008, showed a stable population. H. filiformis abundance increased slightly in 2011–2012. An unidentified disturbance occurred on the mudflat in early 2008 that resulted in the loss of the benthic animals, except for those deep-dwelling animals like Macoma petalum. Animals immediately returned to the mudflat in 2008, which was the first indication that the disturbance was not due to a persistent toxin or to anoxia. The reproductive mode of most species present in 2012 is reflective of the species that were available either as pelagic larvae or as mobile adults. Although oviparous species were lower in number in this group, the authors hypothesize that these species will return slowly as more species move back into the area. The use of functional ecology was highlighted in the 2012 benthic community data, which show that the animals that have now returned to the mudflat are those that can respond successfully to a physical, nontoxic disturbance. Today, community data show a mix of animals that consume the sediment, filter feed, have pelagic larvae that must survive landing on the sediment, and brood their young. USGS scientists continue to observe the community’s response to the 2008 defaunation event because it allows them to examine the response of the community to a natural disturbance (possible causes include sediment accretion or freshwater inundation) and compare this recovery to the long-term recovery observed in the 1970s when the decline in sediment pollutants was the dominating factor.

California↗