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At least 145 records · Page 8Linked to original sources

Coding-Complete Genome Sequence of Avian Orthoavulavirus 16, isolated from Emperor Goose (Anser canagica) feces, Alaska, USA

We sequenced the coding-complete genome of an avian orthoavulavirus serotype 16 (AOAV-16) isolate recovered from emperor goose ( Anser canagicus ) feces collected in Alaska. The detection of AOAV-16 in North America and genomic sequencing of the resultant isolate confirms that the geographic distribution of this virus extends beyond Asia.

Microbiology Resource Announcements

ENSO events in the northern Gulf of Alaska, and effects on selected marine fisheries

The 1991-93 El Nino-Southern Oscillation (ENSO) event first appeared in the northern Gulf of Alaska in autumn 1991 with warm sea-surface temperatures. In winter 1992, there were pulses of increased sea level and anomalous circulation. El Nino conditions persisted at least through summer 1993. The effects of this ENSO event on major groundfish species and Pacific herring in the northern Gulf of Alaska were examined and compared with the effects of previous ENSO events. There is little evidence that the 1991-93 or 1982-83 ENSO events affected landings of walleye pollock, Pacific cod, Pacific halibut, or arrowtooth flounder. Some changes in distribution of groundfish species were observed in 1993, but the effect was similar to changes observed in non-ENSO warm years. In general, warm ocean conditions have a positive effect on recruitment of northern stocks, but ENSO events appear to have an inconsistent effect on year-class strength within species and among different species. For example, strong year classes of halibut and arrowtooth flounder sometimes, but not always, coincide with ENSO events; ENSO events are associated with moderate to weak year classes of cod and pollock. However, post-ENSO warm years often are associated with strong recruitment of many groundfish species. Major changes have occurred in the Gulf of Alaska ecosystem since 1977. The influence of the 1976 ENSO event in precipitating these changes and the role of the frequency or strength of subsequent El Nino events is presently unknown. Herring and other stocks of small pelagic fishes may be more affected by ENSO events. In particular, decreased catches, recruitment, and weight-at-age of herring are sometimes associated with ENSO events. Furthermore, a variety of seabirds which feed mostly on pelagic forage fishes or the pelagic juvenile stages of groundfish suffered widespread mortalities and breeding failures in the Gulf of Alaska during the ENSO years of 1983 and 1993. These effects on seabirds were also observed over a wider geographic range, from California to the western Bering Sea.

Report

Design of ecoregional monitoring in conservation areas of high-latitude ecosystems under contemporary climate change

Land ownership in Alaska includes a mosaic of federally managed units. Within its agency’s context, each unit has its own management strategy, authority, and resources of conservation concern, many of which are migratory animals. Though some units are geographically isolated, many are nevertheless linked by paths of abiotic and biotic flows, such as rivers, air masses, flyways, and terrestrial and aquatic migration routes. Furthermore, individual land units exist within the context of a larger landscape pattern of shifting conditions, requiring managers to understand at larger spatial scales the status and trends in the synchrony and spatial concurrence of species and associated suitable habitats. Results of these changes will determine the ability of Alaska lands to continue to: provide habitat for local and migratory species; absorb species whose ranges are shifting northward; and experience mitigation or exacerbation of climate change through positive and negative atmospheric feedbacks. We discuss the geographic and statutory contexts that influence development of ecological monitoring; argue for the inclusion of significant amounts of broad-scale monitoring; discuss the importance of defining clear programmatic and monitoring objectives; and draw from lessons learned from existing long-term, broad-scale monitoring programs to apply to the specific contexts relevant to high-latitude protected areas such as those in Alaska. Such areas are distinguished by their: marked seasonality; relatively large magnitudes of contemporary change in climatic parameters; and relative inaccessibility due to broad spatial extent, very low (or zero) road density, and steep and glaciated areas. For ecological monitoring to effectively support management decisions in high-latitude areas such as Alaska, a monitoring program ideally would be structured to address the actual spatial and temporal scales of relevant processes, rather than the artificial boundaries of individual land-management units. Heuristic models provide a means by which to integrate understanding of ecosystem structure, composition, and function, in the midst of numerous ecosystem drivers.

Alaska

Assessing the earthquake hazards in urban areas

Major urban areas in widely scattered geographic locations across the United States are a t varying degrees of risk from earthquakes. the locations of these urban areas include Charleston, South Carolina; Memphis Tennessee; St.Louis, Missouri; Salt Lake City, Utah; Seattle-Tacoma, Washington; Portland, Oregon; and Anchorage, Alaska; even Boston, Massachusetts, and Buffalo New York, have a history of large earthquakes. Cooperative research during the past decade has focused on assessing the nature and degree of the risk or seismic hazard i nthe broad geographic regions around each urban area. The strategy since the 1970's has been to bring together local, State, and Federal resources to solve the problem of assessing seismic risk. Successfl sooperative programs have been launched in the San Francisco Bay and Los Angeles regions in California and the Wasatch Front region in Utah.

Earthquakes & Volcanoes (USGS)

Radar structure of earthquake-induced, coastal landslides in Anchorage, Alaska

Ground-penetrating radar (GPR) was used to investigate the internal structure of two large landslides in Anchorage, Alaska that resulted from the great 1964 earthquake. The Government Hill and Turnagain Heights landslides occurred in similar stratigraphic and geographic settings, yet the style of ground deformation is different at each site. GPR data are compared with previous investigations and are shown, under certain conditions, to have utility in the identification of ancient landslides. Reflection surveys accurately reproduced the subsurface geometry of horst and graben structures and imaged finer scale features such as ground cracks and fissures. Where more complete disintegration of the bluff occurred, GPR reflections from within the slide mass are generally chaotic and include no recognizable evidence of the original stratigraphy. Common midpoint surveys estimated GPR velocity in the sediment and allowed the conversion of travel times to depths.

Alaska

Dynamic landscapes in northwestern North America structured populations of wolverines (Gulo gulo)

Cyclic climatic and glacial fluctuations of the Late Quaternary produced a dynamic biogeographic history for high latitudes. To refine our understanding of this history in northwestern North America, we explored geographic structure in a wide-ranging carnivore, the wolverine ( Gulo gulo ). We examined genetic variation in populations across mainland Alaska, coastal Southeast Alaska, and mainland western Canada using nuclear microsatellite genotypes and sequence data from the mitochondrial DNA (mtDNA) control region and Cytochrome b ( Cytb ) gene. Data from maternally inherited mtDNA reflect stable populations in Northwest Alaska, suggesting the region harbored wolverine populations since at least the Last Glacial Maximum (LGM; 21 Kya), consistent with their persistence in the fossil record of Beringia. Populations in Southeast Alaska are characterized by minimal divergence, with no genetic signature of long-term refugial persistence (consistent with the lack of pre-Holocene fossil records there). The Kenai Peninsula population exhibits mixed signatures depending on marker type: mtDNA data indicate stability (i.e., historical persistence) and include a private haplotype, whereas biparentally inherited microsatellites exhibit relatively low variation and a lack of private alleles consistent with a more recent Holocene colonization of the peninsula. Our genetic work is largely consistent with the early 20 th century taxonomic hypothesis that wolverines on the Kenai Peninsula belong to a distinct subspecies. Our finding of significant genetic differentiation of wolverines inhabiting the Kenai Peninsula, coupled with the peninsula’s burgeoning human population and the wolverine’s known sensitivity to anthropogenic impacts, provides valuable foundational data that can be used to inform conservation and management prescriptions for wolverines inhabiting these landscapes.

Alaska, British Columbia, Northwest Territories, N

Species profiles: Life histories and environmental requirements of coastal fishes and invertebrates (Pacific Northwest)--ghost and blue mud shrimp

Geographic range: The ghost shrimp is found in intertidal areas along the west coast of North America from Mutiny Bay, Alaska, to the mouth of the Tijuana River, San Diego County, California; MacGinitie (1934) and Ricketts and Calvin (1968) reported finding specimens as far south as El Estuario de Punto Banda, Baja California Norte, Mexico. The blue mud shrimp is found from southeastern Alaska to San Quentin Bay (Bahia de San Quentin) in Baja California Norte. The general distribution of the two species in the Pacific Northwest is identical (Figure 3).

California, Oregon, Washington

Summer spawning in the fourhorn sculpin, Myoxocephalus quadricornis, from Alaska

Histological ovarian analysis indicates summer spawning occurs in Myoxocephalus quadricornis (Fourhorn Sculpin) from Alaska. Previous studies have shown this species spawns during winter in the Baltic Sea; the data presented herein suggests that geographical variation may occur in the timing of spawning of this species.

Alaska

Expressed MHC class II genes in sea otters (Enhydra lutris) from geographically disparate populations

The major histocompatibility complex (MHC) is central to maintaining the immunologic vigor of individuals and populations. Classical MHC class II genes were targeted for partial sequencing in sea otters ( Enhydra lutris ) from populations in California, Washington, and Alaska. Sequences derived from sea otter peripheral blood leukocyte mRNAs were similar to those classified as DQA , DQB , DRA , and DRB in other species. Comparisons of the derived amino acid compositions supported the classification of these as functional molecules from at least one DQA , DQB , and DRA locus and at least two DRB loci. While limited in scope, phylogenetic analysis of the DRB peptide‐binding region suggested the possible existence of distinct clades demarcated by geographic region. These preliminary findings support the need for additional MHC gene sequencing and expansion to a comprehensive study targeting additional otters.

Tissue Antigens

Stratigraphy, structure, and palinspastic synthesis of the western Brooks Range, northwestern Alaska

This report is an effort to describe and decipher the mid-Paleozoic to Lower Cretaceous stratigraphy and the orogenic evolution of the western Brooks Range. The western Brooks Range primarily is composed of stacks of complexly deformed thrust sheets that contain mostly coeval sequences of rocks with slightly different lithologic facies. In order to simplify the thrust-faulted stratigraphy and palinspastic restoration, the rocks are grouped into eight principal structural levels. The lowest structural level is believed to be autochthonous or parautochthonous and above that, each succeeding level is designated allochthon one through seven. Allochthon seven is composed of the remnants of an extensive ophiolite sheet. Allochthon six is composed of pillow basalt with subordinate intermediate volcanic rocks, chert, and Devonian limestone. It is not certain whether this allochthon was formed in a continental or oceanic setting. Allochthons five through one consist of distinctive and coeval sequences of Devonian to Lower Cretaceous sedimentary rocks that were deposited in a continental setting. The present geographic distribution of each structural level is shown on the allochthon map of the western Brooks Range. The stratigraphy of the southern part of northern Alaska has been reconstructed by systematically unstacking lower allochthons to the north of higher allochthons. The palinspastic map that results from this procedure shows that the minimum thrust displacement between allochthon seven and the autochthon is approximately 700 to 800 km. Schematic cross sections drawn across the palinspastic map show how the stratigraphy of the southern part of northern. Alaska most likely appeared prior to the orogeny. During Devonian and Mississippian time, the sedimentary sequences that are now part of allochthons one to five are inferred to have been deposited in an ensialic basin with both northern and southern margins. During Pennsylvanian time, the sequences seem to have become part of a southward-sloping continental shelf when a southern land area moved away from northern Alaska by an inferred plate tectonic process of rifting or strike-slip motion. In Early Jurassic time just prior to the Brooks Range orogeny, northern Alaska probably was an extensive continental shelf with oceanic conditions to the south and land to the north. The Brooks Range orogeny seems to have begun in the Middle Jurassic as the Arctic Alaska plate was underthrust (subducted) southward beneath oceanic crust of allochthon seven. At progressively later stages in the underthrusting process, the upper parts of the continental shelf were detached from the subthrust basement on which they were deposited, resulting in the other allochthons of the western Brooks Range. The period of major thrusting ceased by Albian time in the Early Cretaceous. During middle and Late Cretaceous time, epeirogenic uplift in the Brooks Range caused large quantities of clastic detritus to be shed into successor basins to the north and south. Broad folds and reverse faults in Upper Cretaceous sediments north of the Brooks Range provide evidence for a later period(s) of less intense deformation in northern Alaska.

Open-File Report

Temporal and geographic variation in survival of juvenile black brant

First-year survival has important implications for the structure and growth of populations. We examined variation in seasonal survival of first-year Pacific Black Brant ( Branta bernicla nigricans ) marked late in summer in Alaska at two brood-rearing areas on the Yukon-Kuskokwim Delta (Tutakoke and Kokechik) and one area on the Arctic Coastal Plain to provide insight into the magnitude and timing of mortality during fall migration. First-year survival was lower in early fall (15 July-1 October), when birds fledged from brood-rearing areas and migrated to their primary fall staging area at Izembek Lagoon, Alaska, than during late fall and early winter (1 October-15 February), when birds made a long-distance transoceanic flight (>5000 km) to wintering areas in Baja California, Mexico. When compared to other years, monthly survival during early fall was 20-24% lower in 1992, the year of latest hatch dates and slowest growth of goslings. There was strong evidence to indicate that survival varied geographically within the early fall period. Monthly survival estimates during early fall were lowest for birds from Tutakoke, highest for birds from the Arctic Coastal Plain, and intermediate at Kokechik. Our findings revealed that most juvenile mortality occurred during the first 2 months following banding, and variation in juvenile survival during this period was likely influenced significantly by environmental parameters and habitat conditions on the breeding grounds. Monthly survival estimates during the subsequent 4 months were similar across geographic areas, and long-distance migration was likely the most important contributor to juvenile mortality during this period.

Alaska

Geographic information systems (GIS) compilation of geophysical, geologic, and tectonic data for the circum-North Pacific

The accompanying directory structure contains a Geographic Information Systems (GIS) compilation of geophysical, geological, and tectonic data for the Circum-North Pacific. This area includes the Russian Far East, Alaska, the Canadian Cordillera, linking continental shelves, and adjacent oceans. This GIS compilation extends from 120°E to 115°W, and from 40°N to 80°N. This area encompasses: (1) to the south, the modern Pacific plate boundary of the Japan-Kuril and Aleutian subduction zones, the Queen Charlotte transform fault, and the Cascadia subduction zone; (2) to the north, the continent-ocean transition from the Eurasian and North American continents to the Arctic Ocean; (3) to the west, the diffuse Eurasian-North American plate boundary, including the probable Okhotsk plate; and (4) to the east, the Alaskan-Canadian Cordilleran fold belt. This compilation should be useful for: (1) studying the Mesozoic and Cenozoic collisional and accretionary tectonics that assembled this continental crust of this region; (2) studying the neotectonics of active and passive plate margins in this region; and (3) constructing and interpreting geophysical, geologic, and tectonic models of the region. Geographic Information Systems (GIS) programs provide powerful tools for managing and analyzing spatial databases. Geological applications include regional tectonics, geophysics, mineral and petroleum exploration, resource management, and land-use planning. This CD-ROM contains thematic layers of spatial data-sets for geology, gravity field, magnetic field, oceanic plates, overlap assemblages, seismology (earthquakes), tectonostratigraphic terranes, topography, and volcanoes. The GIS compilation can be viewed, manipulated, and plotted with commercial software (ArcView and ArcInfo) or through a freeware program (ArcExplorer) that can be downloaded from http://www.esri.com for both Unix and Windows computers using the button below.

North Pacific

Geese migrating over the Pacific Ocean select altitudes coinciding with offshore wind turbine blades

Renewable energy facilities are a key part of mitigating climate change, but can pose threats to wild birds and bats, most often through collisions with infrastructure. Understanding collision risk and the factors affecting it can help minimize impacts on wild populations. For wind turbines, flight altitude is a major factor influencing collision risk, and altitude-selection analyses can evaluate when and why animals fly at certain altitudes under certain conditions. We used GPS tags to track Pacific Flyway geese (Pacific greater white-fronted goose, tule greater white-fronted goose and lesser snow goose) on transoceanic migrations between Alaska and the Pacific Coast of the contiguous United States, an area where offshore windfarm development is beginning. We evaluated how geographic and environmental covariates affected (1) whether birds were at rest on the water versus in flight (binomial model) and (2) altitude selection when in flight (similar to a step-selection framework). We then used a Monte Carlo simulation to predict the probability of flying at each altitude under various conditions, considering both the fly/rest decision and altitude selection. In both spring and fall, geese showed strong selection for altitudes within the expected rotor-swept zone (20–200 m asl), with 56% of locations expected to be within the rotor-swept zone under mean daylight conditions and 28% at night. This indicates a high possibility that migrating geese may be at risk of collision when passing through windfarms. Although there was some variation across subspecies, geese were most likely to be within the rotor-swept zone with little wind or light tailwinds, low clouds, little to no precipitation and moderate to cool air temperatures. Geese were unlikely to be in the rotor-swept zone at night, when most individuals were at rest on the water. Synthesis and applications . These results could be used to inform windfarm management, including decisions to shut down turbines when collision risk is high. The altitude-selection framework we demonstrate could facilitate further study of other bird species to develop a holistic view of how windfarms in this area could affect the migratory bird community as a whole.

Journal of Applied Ecology

Survival of breeding Pacific common eiders on the Yukon-Kuskokwim Delta, Alaska

Populations of Pacific common eiders ( Somateria mollissima v-nigrum ) breeding in Alaska, USA, have declined markedly over the past 40 years. We studied survival of adult female Pacific common eiders using capture—recapture of nesting hens at 3 sites on the Yukon-Kuskokwim Delta (YKD), Alaska from 1994 to 2004. We used data consisting of 268 recapture events from 361 uniquely marked individuals to investigate temporal, geographic, and environmental variation in adult female survival. Our results suggest apparent annual survival of adult eiders from the YKD was high (0.892, SE = 0.022) and spatially and temporally invariant (σ 2 = 0.005), a pattern consistent with other long-lived marine birds. Moreover, our results suggest adult survival may be functionally fixed for Pacific common eiders, and at the present, adult survival may be relatively unresponsive to environmental or management perturbations. Our data did not support hypothesized variation in survival relative to mortality factors such as predation on breeding grounds, physiologic costs of reproduction, and wintering conditions. Although changes in adult survival likely have a large potential effect on prospective population growth, our results suggest viable management actions aimed at increasing survival may be extremely limited.

Journal of Wildlife Management

Automated mapping of mineral groups and green vegetation from Landsat Thematic Mapper imagery with an example from the San Juan Mountains, Colorado

Multispectral satellite data acquired by the ASTER (Advanced Spaceborne Thermal Emission and Reflection Radiometer) and Landsat 7 Enhanced Thematic Mapper Plus (TM) sensors are being used to populate an online Geographic Information System (GIS) of the spatial occurrence of mineral groups and green vegetation across the western conterminous United States and Alaska. These geospatial data are supporting U.S. Geological Survey national-scale mineral deposit database development and other mineral resource and geoenvironmental research as a means of characterizing mineral exposures related to mined and unmined hydrothermally altered rocks and mine waste. This report introduces a new methodology for the automated analysis of Landsat TM data that has been applied to more than 180 scenes covering the western United States. A map of mineral groups and green vegetation produced using this new methodology that covers the western San Juan Mountains, Colorado, and the Four Corners Region is presented. The map is provided as a layered GeoPDF and in GIS-ready digital format. TM data analysis results from other well-studied and mineralogically characterized areas with strong hydrothermal alteration and (or) supergene weathering of near-surface sulfide minerals are also shown and compared with results derived from ASTER data analysis.

Colorado

An annotated bibliography of literature on Alaska water birds

The demand for information on birds in Alaska has surged within the past few years, primarily because of the need to adequately assess the impacts of a wide range of planned developments. The accompanying increase in studies of avian populations has resulted in a growing need for a comprehensive bibliography of Alaska ornithology. An initial effort by Bartonek and Lensink (1978) provided a list of published and unpublished references on marine birds, but this list was only marginally useful because it lacked adequate indexing and annotation of references cited. Their bibliography, however, plus those of Cade (1953) and Gabrielson and Lincoln (1959), provided the basis and primary reference sources for our work. In the present bibliography we have attempted to compile all substantive references addressing water birds in Alaska because this group of birds appears to be most Vulnerable to repercussions of development, particularly along the coast. However, the works cited make up an estimated 70-80% of all literature on birds in Alaska, and this volume thus provides an initial source of references on terrestrial birds. This bibliography, which contains 1554 citations, is current for most journal sources through 1979 and most of 1980. The content of each paper has been summarized, and we have indexed the citations by subject, species, and geographic location to make the bibliography a more useful reference. Furthermore, the bibliography has been designed to facilitate future inclusion of references that have been omitted or that will be published in the rapidly growing body of literature on Alaska birds.

Alaska

Sixth report of the United States Geographic Board: 1890 to 1932

This report contains, with the exception of a comparatively small number, all the decisions rendered by the board from its organization in 1890 through June, 1932, and supersedes all previous reports. Not included in this report are such decisions as have either been vacated, or, being revised, have been replaced by new decisions listed under the revised name or spelling. Several thousand earlier decisions for features and places in the United States, Alaska, and the Philippine Islands have been amplified, brought up to date, and made to agree in form and content with the decisions rendered in recent years. So great have been the changes since 1914 in the geographic nomenclature of the Eastern Hemisphere that the board deemed it advisable to vacate all the names as given in the fifth and earlier reports for places and features not within the United States and its outlying territories and possessions. In place of these a new list has been drawn up comprising some 2,500 of the more important names, which are in accord with the changes which have taken place since the World War. These new decisions, printed in 1932 in a separate pamphlet with the title, "First Report on Foreign Geographic Names," have been consolidated in this volume with domestic names in one alphabetical arrangement. In the fifth report the Philippine and the Hawaiian names were each separately listed at the close of that volume. In the present report, however, they are interspersed alphabetically with other names. The Board welcomes the views of map makers and of all others who are interested in geographic nomenclature as to how its decisions may be made of greater service.

Report of the United States Geographic Board

Bald eagles and sea otters in the Aleutian Archipelago: indirect effects of trophic cascades.

Because sea otters ( Enhydra lutris ) exert a wide array of direct and indirect effects on coastal marine ecosystems throughout their geographic range, we investigated the potential influence of sea otters on the ecology of Bald Eagles ( Haliaeetus leucocephalus ) in the Aleutian Islands, Alaska, USA. We studied the diets, productivity, and density of breeding Bald Eagles on four islands during 1993–1994 and 2000–2002, when sea otters were abundant and scarce, respectively. Bald Eagles depend on nearshore marine communities for most of their prey in this ecosystem, so we predicted that the recent decline in otter populations would have an indirect negative effect on diets and demography of Bald Eagles. Contrary to our predictions, we found no effects on density of breeding pairs on four islands from 1993–1994 to 2000–2002. In contrast, diets and diet diversity of Bald Eagles changed considerably between the two time periods, likely reflecting a change in prey availability resulting from the increase and subsequent decline in sea otter populations. The frequency of sea otter pups, rock greenling ( Hexagammus lagocephalus ), and smooth lumpsuckers ( Aptocyclus ventricosus ) in the eagle's diet declined with corresponding increases in Rock Ptarmigan ( Lagopus mutus ), Glaucous-winged Gulls ( Larus glaucescens ), Atka mackerel ( Pleurogrammus monopterygius ), and various species of seabirds during the period of the recent otter population decline. Breeding success and productivity of Bald Eagles also increased during this time period, which may be due to the higher nutritional quality of avian prey consumed in later years. Our results provide further evidence of the wide-ranging indirect effects of sea otter predation on nearshore marine communities and another apex predator, the Bald Eagle. Although the indirect effects of sea otters are widely known, this example is unique because the food-web pathway transcended five species and several trophic levels in linking one apex predator to another.

Ecology