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USGS2001

South China Sea

The South China Sea is poorly understood in terms of its marine biota, ecology and the human impacts upon it. What is known is most often contained in reports and workshop and conference documents that are not available to the wider scientific community. The South China Sea has an area of some 3.3 million km 2 and depths range from the shallowest coastal fringe to 5377 m in the Manila Trench. It is also studded with numerous islets, atolls and reefs many of which are just awash at low tide. It is largely confined within the Tropic of Cancer and, therefore, experiences a monsoonal climate being influenced by the Southwest Monsoon in summer and the Northeast Monsoon in winter. The South China Sea is a marginal sea and, therefore, largely surrounded by land. Countries that have a major influence on and claims to the sea include China, Malaysia, the Philippines and Vietnam, although Thailand, Indonesia and Taiwan have some too. The coastal fringes of the South China Sea are home to about 270 million people that have had some of the fastest developing and most vibrant economies on the globe. Consequently, anthropogenic impacts, such as over-exploitation of resources and pollution, are anticipated to be huge although, in reality, relatively little is known about them. The Indo-West Pacific biogeographic province, at the centre of which the South China Sea lies, is probably the world's most diverse shallow-water marine area. Of the three major nearshore habitat types, i.e., coral reefs, mangroves and seagrasses, 45 mangrove species out of a global of 51, most of the currently recognised 70 coral genera and 20 of 50 known seagrass species have been recorded from the South China Sea. The island groups of the South China Sea are all disputed and sovereignty is claimed over them by a number of countries. Conflicts have in recent decades arisen over them because of perceived national rights. It is perhaps because of this that so little research has been undertaken on the South China Sea. What data are available, however, and if Hong Kong is used , as it is herein, as an indicator of what the perturbations of other regional cities upon the South China Sea are like, then it is impacted grossly and an ecological disaster has probably already, but unknowingly, happened.

Marine Pollution Bulletin↗

USGS2012

Arthropod prey for riparian associated birds in headwater forests of the Oregon Coast Range

Headwater riparian areas occupy a large proportion of the land base in Pacific Northwest forests, and thus are ecologically and economically important. Although a primary goal of management along small headwater streams is the protection of aquatic resources, streamside habitat also is important for many terrestrial wildlife species. However, mechanisms underlying the riparian associations of some terrestrial species have not been well studied, particularly for headwater drainages. We investigated the diets of and food availability for four bird species associated with riparian habitats in montane coastal forests of western Oregon, USA. We examined variation in the availability of arthropod prey as a function of distance from stream. Specifically, we tested the hypotheses that (1) emergent aquatic insects were a food source for insectivorous birds in headwater riparian areas, and (2) the abundances of aquatic and terrestrial arthropod prey did not differ between streamside and upland areas during the bird breeding season. We found that although adult aquatic insects were available for consumption throughout the study period, they represented a relatively small proportion of available prey abundance and biomass and were present in only 1% of the diet samples from only one of the four riparian-associated bird species. Nonetheless, arthropod prey, comprised primarily of insects of terrestrial origin, was more abundant in streamside than upland samples. We conclude that food resources for birds in headwater riparian areas are primarily associated with terrestrial vegetation, and that bird distributions along the gradient from streamside to upland may be related to variation in arthropod prey availability. Because distinct vegetation may distinguish riparian from upland habitats for riparian-associated birds and their terrestrial arthropod prey, we suggest that understory communities be considered when defining management zones for riparian habitat.

Oregon↗

USGS2025

Effects of northern bobwhite habitat management on avian species of conservation concern

The umbrella species concept is often used as a tool to guide management decisions and focus efforts towards one focal species whose habitat needs overlap that of other species. We assessed this concept in the context of an agriculturally dominant landscape using one of the most well-studied avian species in North America as a target for conservation efforts: Northern Bobwhite ( Colinus virginianus ). This species is often viewed as an umbrella species for grassland and shrubland bird conservation throughout its native range due to its complex, year-round habitat requirements. We assessed the influence of Northern Bobwhite habitat management on six songbird species of conservation concern in Iowa by evaluating similarities and differences in habitat associations between each species. Our objectives were to (1) assess which vegetation characteristics were most strongly associated with Northern Bobwhite occupancy and (2) evaluate whether those characteristics were also associated with abundance of the focal songbird species. We used occupancy and N-mixture models to assess relationships between vegetation characteristics and Northern Bobwhite occupancy and songbird abundance, respectively. We found that the vegetation characteristics most strongly associated with Northern Bobwhite occupancy probability were the amounts of closed canopy forest, early successional woody vegetation, non-vegetated areas, and percent cover of bare ground. We found that for some of these covariates, including the amounts of forest and non-vegetated area, the effect on focal songbird species abundance aligned with Northern Bobwhite occupancy. For others, including the amount of early successional woody vegetation, the effects differed. This assessment of overlap and variability in habitat associations suggests that Northern Bobwhite-targeted management can provide benefits to other grassland and shrubland birds, but may also come with some trade-offs. This work adds to existing literature, further highlighting the nuances of the umbrella species concept in that land management benefits from the assessment of trade-offs and inclusion of local community dynamics.

Iowa↗

USGS2019

Patterns of big sagebrush plant community composition and stand structure in the western United States

Big sagebrush ( Artemisia tridentata Nutt.) plant communities are found in western North America and comprise a mix of shrubs, forbs, and grasses. Climate, topography, and soil water availability are important factors that shape big sagebrush stand structure and plant community composition; however, most studies have focused on understanding these relationships at sites in a small portion of the big sagebrush region. Our goal was to characterize detailed stand structure and plant composition patterns and identify environmental variables related to those patterns by sampling 15 sites distributed across the western United States. In each site, we characterized stand structure at the individual shrub level and at the site level. We quantified size distributions and assessed relationships among canopy volume, age, and height. We also characterized functional type cover and species composition and related those to climatic, topographic, and edaphic variables. Mean big sagebrush age ranged from 21 (± 8) to 57 (± 22) yr at individual sites, mean height ranged from 0.23 (± 0.12) to 0.67 (± 0.23) m, and mean canopy volume ranged from 0.03 (± 0.04) to 0.62 (± 0.51) m 3 . Bare ground and litter contributed the most cover (mean = 64%), followed by big sagebrush (mean = 39% of vascular plant cover). There was a negative relationship between big sagebrush cover and grass and forb cover. Species composition was related to both climate and elevation, likely because these variables influence water availability. Although our study was limited to 15 field sites, our detailed descriptions of widely distributed sites provide insight into the magnitude of variability in big sagebrush plant community structure.

Rangeland Ecology and Management↗

USGS2022

Detection and characterization of coastal tidal wetland change in the northeastern US using Landsat time series

Coastal tidal wetlands are highly altered ecosystems exposed to substantial risk due to widespread and frequent land-use change coupled with sea-level rise, leading to disrupted hydrologic and ecologic functions and ultimately, significant reduction in climate resiliency. Knowing where and when the changes have occurred, and the nature of those changes, is important for coastal communities and natural resource management . Large-scale mapping of coastal tidal wetland changes is extremely difficult due to their inherent dynamic nature. To bridge this gap, we developed an automated algorithm for DEtection and Characterization of cOastal tiDal wEtlands change (DECODE) using dense Landsat time series. DECODE consists of three elements, including spectral break detection, land cover classification and change characterization. DECODE assembles all available Landsat observations and introduces a water level regressor for each pixel to flag the spectral breaks and estimate harmonic time-series models for the divided temporal segments. Each temporal segment is classified (e.g., vegetated wetlands, open water, and others – including unvegetated areas and uplands) based on the phenological characteristics and the synthetic surface reflectance values calculated from the harmonic model coefficients, as well as a generic rule-based classification system. This harmonic model-based approach has the advantage of not needing the acquisition of satellite images at optimal conditions (i.e., low tide status) to avoid underestimating coastal vegetation caused by the tidal fluctuation. At the same time, DECODE can also characterize different kinds of changes including land cover change and condition change (i.e., land cover modification without conversion). We used DECODE to track status of coastal tidal wetlands in the northeastern United States from 1986 to 2020. The overall accuracy of land cover classification and change detection is approximately 95.8% and 99.8%, respectively. The vegetated wetlands and open water were mapped with user's accuracy of 94.6% and 99.0%, and producer's accuracy of 98.1% and 93.5%, respectively. The cover change and condition change were mapped with user's accuracy of 68.0% and 80.0%, and producer's accuracy of 80.5% and 97.1%, respectively. Approximately 3283 km 2 of the coastal landscape within our study area in the northeastern United States changed at least once (12% of the study area), and condition changes were the dominant change type (84.3%). Vegetated coastal tidal wetland decreased consistently (~2.6 km 2 per year) in the past 35 years, largely due to conversion to open water in the context of sea-level rise.

Remote Sensing of Environment↗

USGS2000

Non-indigenous bamboo along headwater streams of the Luquillo Mountains, Puerto Rico: Leaf fall, aquatic leaf decay and patterns of invasion

The introduction of bamboo to montane rain forests of the Luquillo Mountains, Puerto Rico in the 1930s and 1940s has led to present-day bamboo monocultures in numerous riparian areas. When a non-native species invades a riparian ecosystem, in-stream detritivores can be affected. Bamboo dynamics expected to influence stream communities in the Luquillo Experimental Forest (LEF) were examined. Based on current distributions, bamboo has spread down-stream at a rate of 8 m y-1. Mean growth rate of bamboo culms was 15.3 cm d-1. Leaf fall from bamboo stands exceeded that of native mixed-species forest by c. 30% over a 10-mo study. Bamboo leaves (k = -0.021), and leaves from another abundant riparian exotic, Syzygium jambos (Myrtaceae) (k = -0.018), decayed at relatively slow rates when submerged in streams in fine-mesh bags which excluded macro-invertebrate leaf processors. In a second study, with leaf processors present, bamboo decay rates remained unchanged (k = -0.021), while decay rates of S. jambos increased (k = -0.037). Elemental losses from bamboo leaves in streams were rapid, further suggesting a change in riparian zone/stream dynamics following bamboo invasion. As non-indigenous bamboos spread along Puerto Rico streams, they are likely to alter aquatic communities dependent on leaf input.

Journal of Tropical Ecology↗

USGS2026

Adaptation and response in drylands: A dryland research agenda and campaign strategy

Dryland ecosystems cover 41% of Earth's land surfaces, account for 44% of cultivated lands and 60% of food sources, and make large contributions to the global water and carbon cycles. However, these ecosystems are experiencing unprecedented extremes including heatwaves, floods, and droughts as well as hotter temperatures and often declining water resource availability. These ecosystems are some of the most challenging to monitor given their high temporal variability with rapid response to their environment as well as vast spatial variability with intermixing of different plant species and life forms amongst bare soil coverage. The Adaptation and Response in Drylands (ARID) campaign was selected by National Aeronautics and Space Administration (NASA) as a scoping study to develop a research agenda for a dryland field campaign. Here, we detail our ARID science research agenda and implementation plan that were developed based on an extensive community engagement effort in over 160 events with over a thousand scientists, land managers, and Tribal communities between 2023 and 2024. The selected science themes cover drought and climate variability, ecosystem structure, function, and biodiversity, carbon cycle interannual variability and trends, and social ecological systems (land management and adaptation). We then detail our remote sensing, modeling, and field-based strategies to capture high temporal and high spatial resolution processes. Finally, our implementation strategy is presented which includes focus area selections in a core intensive western U.S. domain and distributed international domains. This strategy includes our overarching guiding principles of using multi-temporal airborne acquisitions and super sites as well as enhancing land management in co-development with end-user partners. While originally developed for NASA, our ARID report creates a blueprint for any future dryland field campaign, at any scale, that can be implemented widely for foundational and applied science objectives.

Global Change Biology↗

USGS1992

Recruitment of seedlings and vegetative sprouts in unburned chaparral

Age structure of 12 stands of chaparral, unburned for 56—120 yr, was investigated. All shrubs produced discernible growth rings, and ring counts on stems from stands of known age, plus synchrony in annual growth ring width among species in the same stand, were taken as evidence that growth rings represented annual rings. Species that survive fire by vegetative regeneration from the root crown were capable, in the absence of fire, of continuously regenerating their canopy with basal sprouts. These multistemmed resprouting species had an uneven age structure, indicating continuous recruitment of new stems into the population. The predicted age distribution for resprouting shrub stem populations illustrated very different patterns for species within the same stand and for the same species in different stands. In most resprouting shrubs, <15% of the stems dated back to the first decade after fire, and in many species the majority of stems were <10 yr of age. This contrasts with obligate seeding shrubs that do not initiate new stems from the root crown, and for which, in undisturbed chaparral, 100% of the stems date back to the years immediately following the last fire. Seedling recruitment was abundant in seven of these old chaparral communities. Species with abundant seedling populations, ranging from 1000 to 37 500 individuals/ha, were Quercus dumosa, Q. wislizenii, Rhammus crocea, Prunus ilicifolia, Heteromeles arbutifolia and Cercocarpus betuloides. These species share the characteristic of regenerating after fire solely by resprouting, and seldom recruit seedlings during the first few decades after fire. Thus, it is concluded that these postfire obligate resprouters require long fire—free periods for successful reproduction and potential population expansion. For all but the last species, seedlings were most abundant in stands with a closed canopy and deep litter layer. Safe sites for establishment were not in gaps, although gaps may be important for successful recruitment of saplings into the adult population. For all sprouting species the actual age distribution of seedlings and saplings indicated that recruitment did not occur every year; mortality was high but most populations had some saplings that survived beyond the first decade. For all postfire seeding taxa, viz., Adenostoma, Arctostaphylos, and Ceanothus, no significant seeding recruitment was observed in these ancient communities. Seedlings of woodland tree species had colonized several of these old chaparral communities; however, even in stands a century old, successional replacement of chaparral was not imminent.

Ecology↗

USGS2002

Interactions of an insecticide with competition and pond drying in amphibian communities

Amphibian populations are often imbedded in agricultural landscapes. Therefore the potential for contamination of their habitat is considerable. Our study examined the effects of an insecticide (carbaryl, a neurotoxin), on larval amphibian communities experiencing natural stresses of competition for resources, predation, and pond drying. In a set of experimental ponds, tadpoles of three anuran species (southern leopard frog [ Rana sphenocephala ], plains leopard frog [ R. blairi ], and the Woodhouse's toad [ Bufo woodhousii ]) were added to 1000-L ponds containing leaf litter, plankton, two newts ( Notophthalmus viridescens ), and four overwintered green frog ( R. clamitans ) tadpoles. We manipulated the overall tadpole density (low or high), pond hydroperiod (constant or drying), and chemical exposure (0, 3.5, 5.0, or 7.0 mg/L carbaryl) of the ponds. We measured mass, time, and survival to metamorphosis to determine treatment effects. Carbaryl positively affected Woodhouse's toad survival, although it had a negligible effect on both leopard frog species. Tadpole density interacted with the chemical treatment: Proportionately more Woodhouse's toads survived to metamorphosis in high-density environments than in low-density or control environments. Greater survival may be an indirect effect of increased algal food resources from carbaryl exposure. Most newts lost mass over the course of the experiment, although ponds with drying hydroperiods and high anuran density were the least favorable environments. Overwintered green frogs exposed to carbaryl had longer larval periods on average than did green frogs in control ponds. Our study demonstrated that even sublethal, short-lived contaminants can alter natural communities in ways that cannot be predicted from simple, one-factor studies.

Missouri↗

USGS2003

The use of traditional Hawaiian knowledge in the contemporary management of marine resources

It is traditional for Hawaiians to "consult nature" so that fishing is practiced at times and places, and with gear that causes minimum disruption of natural biological and ecological processes. The Ho'olehua Hawaiian Homestead continues this tradition in and around Mo'omomi Bay on the northwest coast of the island of Moloka'i. This community relies heavily on inshore marine resources for subsistence and consequently, has an intimate knowledge of these resources. The shared knowledge, beliefs, and values of the community are culturally channeled to promote proper fishing behavior. This informal system brings more knowledge, experience, and moral commitment to fishery conservation than more centralized government management. Community-based management in the Mo'omomi area involves observational processes and problem-solving strategies for the purpose of conservation. The system is not articulated in the manner of Western science, but relies instead on mental models. These models foster a practical understanding of local inshore resource dynamics by the fishing community and, thus, lend credibility to unwritten standards for fishing conduct. The "code of conduct" is concerned with how people fish rather than how much they catch.

Hawai'i↗

USGS2011

Chapter 2: Sagebrush-associated species of conservation concern

Selection of species of concern is a critical early step in conducting broad-scale ecological assessments for conservation planning and management. Many criteria can be used to guide this selection, such as conservation status, existing knowledge base, and association with plant communities of interest. In conducting the Wyoming Basins Ecoregional Assessment (WBEA), we followed a step-wise process to select vascular plant and vertebrate species of concern. Based on our selection process, we identified 65 taxa of sagebrush-associated ( Artemisia spp.) vascular plants of conservation concern. The vast majority were forbs, and nearly all are found in Wyoming (n = 59; 91%), reflecting its central location and spatial dominance (51%) of the study area. Forty-eight plants (74%) were ranked either S1 or S2 (state-level ranks indicating imperilment due to rarity, threats, or other factors) in at least one state within the assessment area. Forty vertebrates of concern were selected for our assessment, including 17 mammals, 18 birds, and 4 reptiles. Among these were 7 vertebrates commonly considered sagebrush-obligate species: sagebrush lizard ( Sceloporus graciosus ), greater sage-grouse ( Centrocercus urophasianus ), sage thrasher ( Oreoscoptes montanus ), sage sparrow ( Amphispiza belli ), Brewer’s sparrow (S pizella breweri ), pronghorn ( Antilocapra americana ), and pygmy rabbit ( Brachylagus idahoensis ). Several vertebrate species of concern in the Wyoming Basins are either rare or imperiled, including black-footed ferret ( Mustela nigripes ) and Wyoming pocket gopher ( Thomomys clusius ).

Wyoming↗

USGS2016

Relationships of three species of bats impacted by white-nose syndrome to forest condition and management

Forest management activities can have substantial effects on forest structure and community composition and response of wildlife therein. Bats can be highly influenced by these structural changes, and understanding how forest management affects day-roost and foraging ecology of bats is currently a paramount conservation issue. With populations of many cave-hibernating bat species in eastern North America declining as a result of white-nose syndrome (WNS), it is increasingly critical to understand relationships among bats and forest-management activities. Herein, we provide a comprehensive literature review and synthesis of: (1) responses of northern long-eared ( Myotis septentrionalis ) and tri-colored ( Perimyotis subflavus ) bats—two species affected by WNS that use forests during summer—to forest management, and (2) an update to a previous review on the ecology of the endangered Indiana bat ( Myotis sodalis ).

General Technical Report↗

USGS2013

California State Waters Map Series: Offshore of Carpinteria, California

In 2007, the California Ocean Protection Council initiated the California Seafloor Mapping Program (CSMP), designed to create a comprehensive seafloor map of high-resolution bathymetry, marine benthic habitats, and geology within the 3-nautical-mile limit of California’s State Waters. The CSMP approach is to create highly detailed seafloor maps through collection, integration, interpretation, and visualization of swath sonar data, acoustic backscatter, seafloor video, seafloor photography, high-resolution seismic-reflection profiles, and bottom-sediment sampling data. The map products display seafloor morphology and character, identify potential marine benthic habitats, and illustrate both the surficial seafloor geology and shallow (to about 100 m) subsurface geology. The Offshore of Carpinteria map area lies within the central Santa Barbara Channel region of the Southern California Bight. This geologically complex region forms a major biogeographic transition zone, separating the cold-temperate Oregonian province north of Point Conception from the warm-temperate California province to the south. The map area is in the southern part of the Western Transverse Ranges geologic province, which is north of the California Continental Borderland. Significant clockwise rotation—at least 90°—since the early Miocene has been proposed for the Western Transverse Ranges province, and the region is presently undergoing north-south shortening. The small city of Carpinteria is the most significant onshore cultural center in the map area; the smaller town of Summerland lies west of Carpinteria. These communities rest on a relatively flat coastal piedmont that is surrounded on the north, east, and west by hilly relief on the flanks of the Santa Ynez Mountains. El Estero, a salt marsh on the coast west of Carpinteria, is an ecologically important coastal estuary. Southeast of Carpinteria, the coastal zone is narrow strip containing highway and railway transportation corridors and a few small residential clusters. Rincon Point is a well-known world-class surf break, and Rincon Island, constructed for oil and gas production, lies offshore of Punta Gorda. The steep bluffs backing the coastal strip are geologically unstable, and coastal erosion problems are ongoing in the map area; most notably, landslides in 2005 struck the small coastal community of La Conchita, engulfing houses and killing ten people. The Offshore of Carpinteria map area lies in the central part of the Santa Barbara littoral cell, whose littoral drift is to the east-southeast. Drift rates have been estimated to be about 400,000 tons/yr at Santa Barbara Harbor (about 15 km west of Carpinteria). At the east end of the littoral cell, eastward-moving sediment is trapped by Hueneme and Mugu Canyons and then transported to the deep-water Santa Monica Basin. Sediment supply to the western and central part of the littoral cell is largely from relatively small transverse coastal watersheds, which have an estimated cumulative annual sediment flux of 640,000 tons/yr. The much larger Ventura and Santa Clara Rivers, the mouths of which are about 25 to 30 km southeast of Carpinteria, yield an estimated 3.4 million tons of sediment annually, the coarser sediment load generally moving southeast, down the coast, and the finer sediment load moving both upcoast and offshore. The offshore part of the map area consists of a relatively flat and shallow continental shelf, which dips so gently (about 0.4° to 0.5°) that water depths at the 3-nautical-mile limit of California’s State Waters are 40 to 45 m. This part of the Santa Barbara Channel is relatively well protected from large Pacific swells from the north and northwest by Point Conception and from the south and southwest by offshore islands and banks. Fair-weather wave base is typically shallower than 20-m water depth, but winter storms are capable of resuspending fine-grained sediments in 30 m of water, and so shelf sediments in the map area probably are remobilized on an annual basis. The shelf is underlain by variable amounts of upper Quaternary shelf, estuarine, and fluvial sediments that thicken to the south. Seafloor habitats in the broad Santa Barbara Channel region consist of significant amounts of soft sediment and isolated areas of rocky habitat that support kelp-forest communities nearshore and rocky-reef communities in deep water. The potential marine benthic habitat types mapped in the Offshore of Carpinteria map area are directly related to its Quaternary geologic history, geomorphology, and active sedimentary processes. These potential habitats lie within the Shelf (continental shelf) megahabitat, dominated by a flat seafloor and substrates formed from deposition of fluvial and marine sediment during sea-level rise. This fairly homogeneous seafloor provides promising habitat for groundfish, crabs, shrimp, and other marine benthic organisms. The only significant interruptions to this homogeneous habitat type are the exposures of hard, irregular, and hummocky sedimentary bedrock and coarse-grained sediment where potential habitats for rockfish and related species exist.

California↗

USGS2017

Environmental Escherichia coli : Ecology and public health implications - A review

Escherichia coli is classified as a rod-shaped, Gram-negative bacterium in the family Enterobacteriaceae . The bacterium mainly inhabits the lower intestinal tract of warm-blooded animals, including humans, and is often discharged into the environment through feces or wastewater effluent. The presence of E. coli in environmental waters has long been considered as an indicator of recent fecal pollution. However, numerous recent studies have reported that some specific strains of E. coli can survive for long periods of time, and potentially reproduce, in extra-intestinal environments. This indicates that E. coli can be integrated into indigenous microbial communities in the environment. This naturalization phenomenon calls into question the reliability of E. coli as a fecal indicator bacterium (FIB). Recently, many studies reported that E. coli populations in the environment are affected by ambient environmental conditions affecting their long-term survival. Large-scale studies of population genetics provide the diversity and complexity of E. coli strains in various environments, affected by multiple environmental factors. This review examines the current knowledge on the ecology of E. coli strains in various environments in regards to its role as a FIB and as a naturalized member of indigenous microbial communities. Special emphasis is given on the growth of pathogenic E. coli in the environment, and the population genetics of environmental members of the genus Escherichia . The impact of environmental E. coli on water quality and public health is also discussed.

Journal of Applied Microbiology↗

USGS2020

Identification of management thresholds of urban development in support of aquatic biodiversity conservation

Urbanization degrades stream ecosystems and causes loss of bodiversity. Using benthic macroinvertebrates as a surragate for overall aquatic diversity, we conducted a series of analytical approaches to derive management thresholds of urban development designed to link ecological responses to the primary management goal of protecting aquatic diversity in streams within the Delaware Water Gap National Recreation Area (USA). We were particularly interested in identifying urban thresholds that represent the early phases of biological impact to support cost-effect management and mitigation interventions. We used taxa-specific modeling approaches within a spatially-explicit framework to develop sensitive thresholds that anticipate and demark the onset of taxa loss and provide a foundation for investigating alternative mechanisms driving biological change. We identified an early-warning threshold of 1.5% urban development in the contributing watershed where 15% of the 107 taxa evaluated exhibited significant declines in abundance but prior to any evidence of extirpation, and an extirpation threshold of 6% urban development where nearly 3% of taxa are likely to be lost locally. These thresholds of urban development are substantially lower than response thresholds typically reported based upon traditional modeling approaches that rely on spatially-implicit summaries of land cover and univariate metrics or composite indices. An analysis of ecological and functional trait composition of taxa determined to be sensitive suggests that reduced storage of benthic organic matter caused by flashier hydrographs may be the primary mechanism driving biological changes observed at relatively low levels of urbanization. Although the extent to which stream communities respond to stressor gradients in a non-linear fashion continues to be debated, we show that threshold approaches can be applied in support of aquatic resource management irrespective of whether or not stress-response functions are non-linear.

New Jersey, Pennsylvania↗

USGS2024

The influence of grazing on the spatiotemporal activity patterns of a primary sage-grouse nest predator

Perturbations in ecological processes can occur when wildlife alter their spatiotemporal activity patterns to avoid human activities that they perceive as a risk. Such perturbations can have cascading effects throughout wildlife communities. For greater sage-grouse ( Centrocercus urophasianus ; hereafter sage-grouse), nest predation plays an important role in population dynamics. Domestic cattle ( Bos taurus ) grazing has been hypothesized to increase nest predation by reducing grass height, and therefore reducing nest concealment, which may facilitate nest detection by predators. Grass height is lower on grazed pastures, but sage-grouse nest success appears similar on pastures grazed at varying intensities in several recent studies. Any reductions in nest concealment caused by grazing could potentially be offset by a localized response of one or more nest predators to the presence of cattle (i.e., the cattle avoidance hypothesis). A reduction in nest predator density or relative use within pastures could explain similar patterns of nest success on pastures grazed at varying intensities. Also, wildlife can potentially partition themselves temporally to avoid risks associated with human activities. For example, a shift in diel activity patterns by nest predators in response to cattle could result in predators being active during portions of the day when they are less efficient at locating sage-grouse nests. Thus, the effects of grazing could be offset by a temporal avoidance of cattle by predators. We deployed motion sensor cameras across six pastures to evaluate whether coyotes ( Canis latrans ; a primary sage-grouse nest predator) altered spatiotemporal activity patterns in response to cattle. We found that the probability of detecting coyotes had a positive relationship with cattle detections at camera sites (β = 0.22; 95% CI = 0.14,0.30). We also found that coyotes did not shift their diel activity patterns in response to cattle being in the pastures. Thus, in our system, similar sage-grouse nest success among pastures with different grazing intensities cannot be explained by the cattle avoidance hypothesis, at least for coyotes.

Idaho↗

USGS2020

Testing the interactive effects of flooding and salinity on tidal marsh plant productivity

Tidal wetlands support plant communities that facilitate carbon storage, accrete soil, and provide habitat for terrestrial and aquatic species. Climate change is likely to alter estuaries through sea-level rise and changing precipitation patterns, although the ecological responses are uncertain. We were interested in plant responses to physiological stress induced by elevated water salinity and flooding conditions, which may be more prevalent under climate change. . We used a greenhouse experiment and factorial flooding (1, 12, 24, and 48 % time) and salinity (0, 5, 15, 30 PSU) treatments to evaluate the productivity responses of three emergent herbaceous species ( Carex lyngbyei, Triglochin maritima, and Argentina pacifica ) common to tidal marshes of the Pacific Northwest, USA. We measured weekly changes in plant height and final above and belowground biomass for all species after 10 weeks. Increased salinity reduced final above and belowground biomass significantly in all three species, with A. pacifica responding the most, followed by C. lyngbyei and T. maritima . Increased flooding also reduced total biomass in A. pacifica and T. maritima . There was a significant response in C. lyngbyei aboveground biomass and A. pacifica height to the flooding-salinity interaction. These results indicate emergent plant community composition may change in response to novel climate conditions in estuaries, driven by distinct physiological tolerances to salinity and flooding, and highlight the importance of considering multiple climate drivers when projecting ecosystem change. This may be especially true for estuaries that currently have prolonged freshwater phases like those in the Pacific Northwest.

Aquatic Botany↗

USGS2018

Hydrological regime and climate interactively shape riparian vegetation composition along the Colorado River, Grand Canyon

Question How closely do riparian plant communities track hydrological and climatic variation in space, and how do interactions among hydrological and climatic filters influence success of flow management strategies? Location Grand Canyon, Arizona, USA. Methods Multi‐year vegetation surveys were conducted across three hydrological zones – active channel, active floodplain and inactive floodplain – within each of 42 sandbars that vary geographically in temperature and precipitation along a 400‐km river segment. Ecological niche models were used to estimate locally optimal conditions of maximum inundation duration, elevation above daily peak flow, mean annual precipitation, and mean maximum and minimum temperature for 16 of the most abundant woody and 58 most abundant herbaceous plant species. These estimates were used to calculate community‐weighted mean (CWM) environmental preferences, which were used to determine how closely vegetation preferences tracked local variation in environmental factors, and to assess interactive responses of species and communities to variation in hydrology and climate. Results Communities closely tracked hydrological variation across zones, but less so within zones. Communities tracked variation in minimum temperature more closely than maximum temperature or precipitation. At the species level, woody plants that were more abundant in wetter hydrological conditions were also more abundant in wetter climatic conditions, and vice versa. This relationship was even stronger at the community level, where there were significant negative relationships between CWM preferences of inundation duration and temperature for both woody and herbaceous vegetation. Conclusions The climate‐hydrology linkages found in this system suggest that increasing temperatures and drought are likely to reduce the inundation tolerance of riparian vegetation within the Grand Canyon. Increasing the duration of high flow events would likely reduce the abundance of encroaching woody vegetation, but could also reduce the resilience of remaining vegetation to heat waves and drought. The reinforcing effects of climatic and hydrological filters are likely to generally result in greater sensitivity of species composition to environmental change than if those environmental filters acted independently. These results have implications for predicting resource responses to environmental change, as well as prescriptions for direct vegetation management to enhance resilience.

Colorado River, Grand Canyon↗