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USGS2024

Quantitative support for the benefits of proactive management for wildlife disease control

Finding effective pathogen mitigation strategies is one of the biggest challenges humans face today. In the context of wildlife, emerging infectious diseases have repeatedly caused widespread host morbidity and population declines of numerous taxa. In areas yet unaffected by a pathogen, a proactive management approach has the potential to minimize or prevent host mortality. However, typically critical information on disease dynamics in a novel host system is lacking, empirical evidence on efficacy of management interventions is limited, and there is a lack of validated predictive models. As such, quantitative support for identifying effective management interventions is largely absent, and the opportunity for proactive management is often missed. We considered the potential invasion of the chytrid fungus, Batrachochytrium salamandrivorans (Bsal), whose expected emergence in North America poses a severe threat to hundreds of salamander species in this global salamander biodiversity hotspot. We developed and parameterized a dynamic multistate occupancy model to forecast host and pathogen occurrence, following expected emergence of the pathogen, and evaluated the response of salamander populations to different management scenarios. Our model forecasted that taking no action is expected to be catastrophic to salamander populations. Proactive action was predicted to maximize host occupancy outcomes relative to wait-and-see reactive management, thus providing quantitative support for proactive management opportunities. The eradication of Bsal was unlikely under all the evaluated management options. Contrary to our expectations, even early pathogen detection had little effect on Bsal or host occupancy outcomes. Our results provide quantitative support that proactive management is the optimal strategy for promoting persistence of disease-threatened salamander populations. Our approach fills a critical gap by defining a framework for evaluating management options prior to pathogen invasion and can thus serve as a template for addressing novel disease threats that jeopardize wildlife and human health.

Conservation Biology↗

USGS2018

The risk of rodent introductions from shipwrecks to seabirds on Aleutian and Bering Sea islands

Accidental introductions of rodents present one of the greatest threats to indigenous island biota, especially seabirds. On uninhabited remote islands, such introductions are likely to come from shipwrecks. Here we use a comprehensive database of shipwrecks in Western Alaska to model the frequency of shipwrecks per Aleutian and Bering Sea island, taken as a proxy for the threat of rodent introductions, using physical variables, and the intensity of nearby fishing traffic and activity as predictors. Using data spanning from 1950 to 2013, we found that shipwrecks were particularly common in the 1980s to early 2000s, with a major peak in wrecks during the late 1980s. Amount of fishing activity within 5 km of an island was the strongest predictor of shipwrecks, followed by the strength of tidal currents and density of large-vessel traffic. Islands with the highest frequency of shipwrecks are all in the eastern Aleutians, including Unimak, Unalaska, and Akun Islands. By contrast, the largest seabird colonies are in the western Aleutian and Pribilof Islands, including Buldir, Kiska, and Saint George islands. Multiplying the frequency of a shipwreck by the number of seabirds breeding per island provides a measure of risk. The risk of rodent introductions from shipwrecks to seabirds was then greatest for Saint George (Bering Sea), Buldir (Western Aleutians) and Saint Matthew islands (Bering Sea). Keeping these high-risk islands rodent free would maintain their high a conservation value. Most islands with a high predicted frequency of shipwrecks already have established rodent populations and therefore few remaining seabirds. Of those islands with established rodent populations, Attu and Kiska Islands would make suitable targets for eradication, given their relatively low expected frequency of shipwrecks for their size. Further improvements in rat prevention on vessels and shipping safety would benefit the economy, human health and safety, and to the long-term conservation of island ecosystems.

Alaska↗

USGS2022

Observed and forecasted changes in land use by polar bears in the Beaufort and Chukchi Seas, 1985–2040

Monitoring changes in the distribution of large carnivores is important for managing human safety and supporting conservation. Throughout much of their range, polar bears ( Ursus maritimus ) are increasingly using terrestrial habitats in response to Arctic sea ice decline. Their increased presence in coastal areas has implications for bear-human conflict, inter-species interactions, and polar bear health and survival. We examined observed trends in land use over three decades by polar bears in the southern Beaufort Sea (SB) and Chukchi Sea (CS) where bears have traditionally spent most of the year on the sea ice. Using data from 408 adult females fitted with satellite radio-collars, we examined trends in the annual proportion of bears coming onshore (hereafter referred to as “percent of bears”) during the summer for ≥21 days, arrival and departure dates, duration spent onshore and relationships with sea ice metrics. We then estimated future land use through 2040 by extrapolating trends and by combining observed relationships between land use and sea ice with projections of future sea ice from an ensemble of earth system models. The observed percent of bears summering onshore and their duration onshore was correlated with the percent of open water that occurred within their population’s range between July and October. As sea ice declined, the percent of bears summering onshore increased from ~5 to 30% in the SB and ~10 to 50% in the CS and duration onshore increased by >30 days to 60–70 days in both populations. Using a range of greenhouse gas emission scenarios and adjustments for faster than forecasted sea ice loss we estimated that 50-62% of SB and 79-88% of CS bears will spend 90–108 and 110–126 days onshore during summer in the SB and CS, respectively, by 2040. Sea ice projections varied little between greenhouse gas emission scenarios prior to 2040 but diverged thereafter. Observed and forecasted increases in polar bear land occupancy puts more bears in proximity to human activities and settlements for longer durations while extending the lack of access to their primary prey. Because human conflict is one of the primary factors affecting the conservation of large carnivores worldwide, mitigation of bear-human interactions on land will be an increasingly important component of polar bear conservation.

Alaska↗

USGS2021

Assessing cyanobacterial frequency and abundance at surface waters near drinking water intakes across the United States

This study presents the first large-scale assessment of cyanobacterial frequency and abundance of surface water near drinking water intakes across the United States. Public water systems serve drinking water to nearly 90% of the United States population. Cyanobacteria and their toxins may degrade the quality of finished drinking water and can lead to negative health consequences. Satellite imagery can serve as a cost-effective and consistent monitoring technique for surface cyanobacterial blooms in source waters and can provide drinking water treatment operators information for managing their systems. This study uses satellite imagery from the European Space Agency's Ocean and Land Colour Instrument (OLCI) spanning June 2016 through April 2020. At 300-m spatial resolution, OLCI imagery can be used to monitor cyanobacteria in 685 drinking water sources across 285 lakes in 44 states, referred to here as resolvable drinking water sources. First, a subset of satellite data was compared to a subset of responses ( n = 84) submitted as part of the U.S. Environmental Protection Agency's fourth Unregulated Contaminant Monitoring Rule (UCMR 4). These UCMR 4 qualitative responses included visual observations of algal bloom presence and absence near drinking water intakes from March 2018 through November 2019. Overall agreement between satellite imagery and UCMR 4 qualitative responses was 94% with a Kappa coefficient of 0.70. Next, temporal frequency of cyanobacterial blooms at all resolvable drinking water sources was assessed. In 2019, bloom frequency averaged 2% and peaked at 100%, where 100% indicated a bloom was always present at the source waters when satellite imagery was available. Monthly cyanobacterial abundances were used to assess short-term trends across all resolvable drinking water sources and effect size was computed to provide insight on the number of years of data that must be obtained to increase confidence in an observed change. Generally, 2016 through 2020 was an insufficient time period for confidently observing changes at these source waters; on average, a decade of satellite imagery would be required for observed environmental trends to outweigh variability in the data. However, five source waters did demonstrate a sustained short-term trend, with one increasing in cyanobacterial abundance from June 2016 to April 2020 and four decreasing.

Water Research↗

USGS2009

Ground-Water Quality Data in the Santa Clara River Valley Study Unit, 2007: Results from the California GAMA Program

Ground-water quality in the approximately 460-square-mile Santa Clara River Valley study unit (SCRV) was investigated from April to June 2007 as part of the statewide Priority Basin project of the Ground-Water Ambient Monitoring and Assessment (GAMA) Program. The GAMA Priority Basin project was developed in response to the Groundwater Quality Monitoring Act of 2001 and is being conducted by the U.S. Geological Survey (USGS) in cooperation with the California State Water Resources Control Board (SWRCB). The study was designed to provide a spatially unbiased assessment of the quality of raw ground water used for public water supplies within SCRV, and to facilitate a statistically consistent basis for comparing water quality throughout California. Fifty-seven ground-water samples were collected from 53 wells in Ventura and Los Angeles Counties. Forty-two wells were selected using a randomized grid-based method to provide statistical representation of the study area (grid wells). Eleven wells (understanding wells) were selected to further evaluate water chemistry in particular parts of the study area, and four depth-dependent ground-water samples were collected from one of the eleven understanding wells to help understand the relation between water chemistry and depth. The ground-water samples were analyzed for a large number of synthetic organic constituents (volatile organic compounds [VOC], pesticides and pesticide degradates, potential wastewater-indicator compounds, and pharmaceutical compounds), a constituent of special interest (perchlorate), naturally occurring inorganic constituents (nutrients, major and minor ions, and trace elements), radioactive constituents, and microbial constituents. Naturally occurring isotopes (tritium, carbon-13, carbon-14 [abundance], stable isotopes of hydrogen and oxygen in water, stable isotopes of nitrogen and oxygen in nitrate, chlorine-37, and bromine-81), and dissolved noble gases also were measured to help identify the source and age of the sampled ground water. Quality-control samples (blanks or replicates, or samples for matrix spikes) were collected from approximately 26 percent of the wells, and the analyses of these samples were used to evaluate the quality of the data for the ground-water samples. Assessment of the quality-control results showed that the quality of the environmental data was good, with low bias and low variability, and as a result, less than 0.1 percent of the analytes detected in ground-water samples were censored. This study did not attempt to evaluate the quality of water delivered to consumers; after withdrawal from the ground, water typically is treated, disinfected, and (or) blended with other waters to maintain acceptable water quality. Regulatory thresholds apply to treated water that is delivered (or, supplied) to the consumer, not to raw ground water. However, to provide some context for the results, concentrations of constituents measured in the raw ground water were compared with regulatory and non-regulatory thresholds established by the U.S. Environmental Protection Agency (USEPA) and the California Department of Public Health (CDPH) and thresholds established for aesthetic concerns (secondary maximum contaminant levels, SMCL-CA) by CDPH. Most constituents that were detected in ground-water samples were reported at concentrations below their established health-based thresholds. VOCs, pesticides and pesticide degradates, and potential wastewater-indicator compounds were detected in about 33 percent or less of the 42 SCRV grid wells. Concentrations of all detected organic constituents were below established health-based thresholds. Perchlorate was detected in approximately 12 percent of the SCRV grid wells; all concentrations reported were below the NL-CA threshold. Additional constituents, including major ions, trace elements, and nutrients were collected at 26 wells (16 grid wells and 10 understanding wells) of the 53 wells sampled f

Data Series↗

USGS2009

The regional geochemistry of soils and willow in a metamorphic bedrock terrain, Seward Peninsula, Alaska, 2005, and its possible relation to moose

In 2005 willow leaves (all variants of Salix pulchra) and A-, B-, and C-horizon soils were sampled at 10 sites along a transect near the Quarry prospect and 11 sites along a transect near the Big Hurrah mine for the purpose of defining the spatial variability of elements and the regional geochemistry of willow and soil over Paleozoic metamorphic rocks potentially high in cadmium (Cd). Willow, a favorite browse of moose (Alces alces), has been shown by various investigators to bioaccumulate Cd. Moose in this region show clinical signs of tooth wear and breakage and are declining in population for unknown reasons. A trace element imbalance in their diet has been proposed as a possible cause for these observations. Cadmium, in high enough concentrations, is one dietary trace element that potentially could produce such symptoms. We report both the summary statistics for elements in willow and soils and the results of an unbalanced, one-way, hierarchical analysis of variance (ANOVA) (general linear model, GLM), which was constructed to measure the geochemical variability in willow (and soil) at various distance scales across the Paleozoic geologic unit high in bioavailable Cd. All of the geochemical data are presented in the Appendices. The two locations are separated by approximately 80 kilometers (km); sites within a location are approximately 0.5 kilometers apart. Duplicate soil samples collected within a site were separated by 0.05 km or slightly less. Results of the GLM are element specific and range from having very little regional variability to having most of their variance at the top (greater than 80 km) level. For willow, a significant proportion of the total variance occurred at the 'between locations' level for ash yield, barium (Ba), Cd, calcium (Ca), cobalt (Co), nickel (Ni), and zinc (Zn). For soils, concentrations of elements in all three soil horizons were similar in that most of the variability in the geochemical data occurred at the 'between locations' and the 'among sites at a location' GLM levels. Most of the variation in concentrations of Cd in soils occurred among sites (separated by 0.5 km) at both locations across all soil horizons and not between the two locations. Cd distribution across the landscape may be due to variation in soil mineralogy, especially the amount of graphite in soil, which has been associated with Cd. Although samples were collected on the same geologic unit, the geochemistry of soils was demonstrated to be uniform with depth but highly variable between locations separated by 80 km. This exploratory study establishes the presence of elevated levels of Cd in willow growing over Paleozoic bedrock in the Seward Peninsula. Further work is needed to definitively link these high Cd levels in willow browse to the health of moose.

Alaska↗

USGS2002

Selected elements and organic chemicals in streambed sediment in the Salem area, Oregon, 1999

Analysis of streambed sediments in the Salem, Oregon, area showed anomalously large concentrations of some elements and organic chemicals, indicating contamination from anthropogenic and/or geologic sources. The streambed sediment sample from Clark Creek, an urban basin, had large concentrations of polycyclic aromatic hyrdocarbons (PAHs), organochlorines, cadmium, lead, and zinc. The sample from the East Fork of Pringle Creek, which is a mostly urban basin, had the highest concentrations of DDD, DDE, and DDT compounds. Aldrin was detected in streambed sediment at only one site, the East Fork of Pringle Creek. Ten of the 14 sites sampled had exceedances of the sediment quality guidelines of the Canadian Council of Ministers of the Environment (CCME), and 8 sites had exceedances of guidelines from the Puget Sound Dredged Disposal Analysis (PSDDA) Program. Trace element concentrations in the Salem area generally were similar to those found previously in the Willamette Basin and nationally. However, cadmium, lead, and zinc concentrations were larger in the sample from Clark Creek than for largest value for Willamette Basin data from earlier studies. Zinc concentrations in the sample from Clark Creek exceeded sediment quality guidelines from the CCME and PSDDA. p,p'-DDE, which is a persistent breakdown product of the banned organochlorine-insecticide, DDT, was detected at all sites. Total DDT (the sum of p,p'-DDD, p,p'-DDE, and p,p'-DDT) concentrations exceeded the PSDDA screening level at eight sites and exceeded twice the PSDDA maximum level at the East Fork of Pringle Creek. Cis- and trans- chlordanes were detected at about 80% of the sites. The concentration of total chlordane for the sample at Clark Creek was larger than for any sample from previous Willamette Basin studies. The largest concentration of dieldrin also was from the sample at Clark Creek, which was the only site that exceeded the CCME guideline for dieldrin. The high levels of contaminants in some Salem area streams indicates the need for further study to assess the biological effects of these contaminants. Future monitoring in the Salem area could include bioassays using benthic invertebrates and the measurement of organochlorine compounds, including DDT, DDE, DDD, and dieldrin in fish tissue. Because resident fish may be consumed by humans and wildlife, fish tissue analyses would be helpful to determine the health risk associated with fish consumption.

Water-Resources Investigations Report↗

USGS2024

Assessing and implementing the concept of Blue Economy in Laurentian Great Lakes fisheries: Lessons from coupled human and natural systems

Inland fisheries often receive little to no attention in global discussions about sustainable development. The consequences of overlooking inland fisheries in sustainability dialogues are increasingly problematic as fisheries stressors (e.g., overharvest, species invasion, climate change, habitat modification) intensify. Elevating the global profile of inland fisheries requires an approach for quantifying and clearly conveying the ecological, economic, and societal values of these systems. One such approach involves the Blue Economy, a multifaceted concept initially used to describe the intersection of marine conservation and sustainable use of marine resources for economic growth. Although conceptually powerful, the Blue Economy has rarely been applied to inland waters and fisheries. To address this knowledge gap, we conceptualized Laurentian Great Lakes fisheries from a Blue Economy perspective. In particular, we evaluated the utility of the coupled human and natural systems (CHANS) framework for characterizing the ecological, economic, and societal values of Laurentian Great Lakes fisheries and associated contributions to the Blue Economy (e.g., human livelihoods, food security, recreation, conservation, economic prosperity). There are numerous opportunities to leverage CHANS methods (e.g., metacoupling, telecoupling) and associated mathematical models to advance fisheries science, inform fisheries management, and ultimately move toward a Blue Economy in the Laurentian Great Lakes. To that end, we demonstrated applications of CHANS methods, discussed strategies for communicating with stakeholders, and provided insights for navigating challenges to developing a Blue Economy in the Laurentian Great Lakes—a model that could be used in the African Great Lakes and other large ecosystems in the world.

Laurentian Great Lakes↗

USGS1997

Combined-sewer overflow data and methods of sample collection for selected sites, Detroit, Michigan

The discharge of untreated sewage is illegal in Michigan unless permitted under Act 245 due to public health concerns. In October, 1992, the Michigan Department of Natural Resources (MDNR, now the Michigan Department of Environmental Quality) issued a discharge permit to Detroit authorizing discharge from the City's 78 combined-sewer overflows (CSOs), and requiring that a long-term control plan be developed to achieve mandated waterquality standards in receiving waters. The U.S. Environmental Protection Agency (USEPA) issued a national CSO policy in April, 1994, which requires (1) operational improvements of existing systems to minimize discharges and prevent their occurrence in dry weather; (2) publicly operated treatment works (POTW) to characterize the frequency and volume of discharges; and (3) construction of CSO discharge control projects where necessary. In 1993, the Southeast Michigan Council of Governments (SEMCOG) requested assistance from the U.S. Geological Survey (USGS), in cooperation with Detroit Water and Sewerage Department (DWSD) and MDNR, Surface Water Quality Division, to address part of the technical data requirements for requirement 2. The USGS scope of services for this interdisciplinary, multiagency investigation consisted of collection, compilation, and interpretation of the necessary hydrologic data, and documentation of results. In addition to USGS personnel, personnel from DWSD assisted with the field collection of samples and in alerting USGS personnel to CSO effluent discharges. From October 1, 1994 through December 31, 1995, four CSOs discharging to the Detroit River in Detroit, Michigan (figure 1) were monitored to characterize storm-related water quantity and quality. Water velocity, stage, and precipitation were measured continuously and recorded at 5-minute intervals. Water-quality samples were collected at discrete times during storms and analyzed for inorganic and organic pollutants. Discharges were sampled between 30 and 78 times for inorganic pollutants, and between 14 and 22 times for organic pollutants, depending on the site. These samples represented between 8 and 17 storms during which one or more of the four selected CSOs discharged. The monitored pollutants included fecal coliform, fecal streptococci, and Escherichia coli; antimony, arsenic, beryllium, cadmium, hexavalent chromium, total chromium, cobalt, copper, iron, lead, manganese, mercury, nickel, silver, thallium and zinc; and polychlorinated biphenyl congeners, volatile organic compounds, and polynuclear aromatic hydrocarbons. Metal and non-metal inorganic pollutants were detected at all sites. Many organic pollutants were not detected at all.

Michigan↗

USGS2009

Developmental toxicity of diphenyl ether herbicides in nestling American kestrels

Beginning the day after hatching, American kestrel (Falco sparverius) nestlings were orally dosed for 10 consecutive days with 5 microliters/g of corn oil (controls) or one of the diphenyl ether herbicides (nitrofen, bifenox, or oxyfluorfen) at concentrations of 10, 50, 250, or 500 mg/kg in corn oil. At 500 mg/kg, nitrofen resulted in complete nestling mortality, bifenox in high (66%) mortality, and oxyfluorfen in no mortality. Nitrofen at 250 mg/kg reduced nestling growth as reflected by decreased body weight, crownrump length, and bone lengths including humerus, radiusulna, femur, and tibiotarsus. Bifenox at 250 mg/kg had less effect on growth than nitrofen, but crownrump, humerus, radiusulna, and femur were significantly shorter than controls. Liver weight as a percent of body weight increased with 50 and 250 mg/kg nitrofen. Other manifestations of impending hepatotoxicity following nitrofen ingestion included increased hepatic GSH peroxidase activity in all nitrofentreated groups, and increased plasma enzyme activities for ALT, AST, and LDHL in the 250mg/kg group. Bifenox ingestion resulted in increased hepatic GSH peroxidase activity in the 50and 250mg/kg groups. Nitrofen exposure also resulted in an increase in total plasma thyroxine (T4) concentration. These findings suggest that altricial nestlings are more sensitive to diphenyl ether herbicides than young or adult birds of precocial species.

Journal of Toxicology and Environmental Health↗

USGS1987

Instream water use in the United States: water laws and methods for determining flow requirements

Water use generally is divided into two primary classes - offstream use and instream use. In offstream use, sometimes called out-of-stream or diversionary use, water is withdrawn (diverted) from a stream or aquifer and transported to the place of use. Examples are irrigated agriculture, municipal water supply, and industrial use. Each of these offstream uses, which decreases the volume of water available downstream from the point of diversion, is discussed in previous articles in this volume. Instream use, which generally does not diminish the flow downstream from its point of use, and its importance are described in this article. One of the earliest instream uses of water in the United States was to turn the water wheels that powered much of the Nation's industry in the 18th and 19th centuries. Although a small volume of water might have been diverted to a mill near streamside, that water usually was returned to the stream near the point of diversion and, thus, the flow was not diminished downstream from the mill. Over time, the generation of hydroelectric power replaced mill wheels as a means of converting water flow into energy. Since the 1920's, the generation of hydroelectric power increasingly has become a major instream use of water. By 1985, more than 3 billion acre-feet of water (3,050,000 million gallons per day) was used annually for hydropower generation (Solley and others, 1988, p. 45)-enough water to cover the State of Colorado to a depth of 51 feet. Navigation is another instream use with a long history. The Lewis and Clark expedition journals and many of Mark Twain's novels illustrate the extent to which the Nation originally depended on adequate streamfiows for basic transportation. Navigation in the 1980's is still considered to be an instream use; however, it often is based upon a stream system that has been modified greatly through channelization, diking, and construction of dams and locks. The present (1987) inland water navigation system in the conterminous United States consists of about 12,000 miles of maintained waterways, over which about 500 million tons of cargo is carried each year (U.S. Army Corps of Engineers, 1988, p. 16). Although not so widely practiced in recent years, streams have been used to dispose of raw waste products from homes, communities, and factories. This use has been discouraged by law and public policy because of public health concerns and the damage it causes to the environment. Beginning in the mid-1960's, other instream uses gained new prominence in the water-resources arena-the assertion of a legal right to a free-flowing stream for biological, recreational, and esthetic purposes. These uses themselves, however, are not new. Riverine habitat always has produced fish, and the beauty of flowing water always has evoked a strong sense of esthetic appreciation. What is new is the emerging legitimacy and awareness of these noneconomic uses under State and Federal laws and regulations. In the past, environmental uses of flowing water were ignored, for the most part, under a long-standing legal tradition that favored offstream uses and certain instream uses that had a strong economic basis. The history of instream-flow policy debate really concerns those recently recognized types of interim uses. Although the more transitional water uses have been protected by law, the recognition of other in stream uses has resulted in substantial changes in State water laws. Although methods for determining the volume of water needed for most traditional water uses are relatively straight-forward and well-established, methods for determining water requirements for the in stream uses have been developed only recently and are continuing to evolve. Water laws that have favored the more traditional water uses, the inherent nature of conflict between instream and offstream water uses, and the special kinds of technological and philosophical problems posed by the "newer" types of instream uses are described below. Water laws that have been passed to accommodate the more recently recognized instream uses are summarized.

Report↗

USGS2021

Occurrence and distribution of mercury in streams and reservoirs in the Triangle Area of North Carolina, July 2007–June 2009

During the time period 2001–2006, the U.S. Geological Survey reported mercury-concentration measurements that exceeded the North Carolina water-quality criterion (NCWQC) of 0.012 microgram per liter for total recoverable mercury in streams and reservoirs across the Triangle Area of North Carolina. Mercury data were sparse, however, generally consisting of only one or two water samples per year. Additional monitoring and data analysis were needed to better determine the occurrence and distribution of mercury in the Triangle Area for all seasons and waterbody types as well as associations between mercury concentrations and water-quality and land-use parameters. Water at fifteen reservoir and 14 stream sites across the Triangle Area was sampled at various times between August 2007 and June 2009, with water samples collected from both the surfaces and bottoms of the water columns in reservoirs and from the surfaces of streams. A bed sediment sample was also collected at all reservoir sites and at all but one stream site. A total of 301 water samples was collected at reservoir sites. Filtered and total recoverable mercury were detected in at least one water sample collected from each reservoir site. A total of 77 water samples was collected from stream sites with filtered mercury detected in samples from one-half of these sites, and total recoverable mercury detected in at least one water sample from all but two sites. Total recoverable and filtered mercury concentrations exceeded the NCWQC for mercury more frequently in reservoir than in stream samples. Differences in sampling frequencies among seasons and between streams and reservoirs, however, may have negatively biased overall estimates of mercury concentrations in streams relative to reservoirs. Filtered mercury concentrations in surface-water samples from reservoirs and total recoverable mercury concentrations in bottom samples from reservoirs were highest in the fall, whereas no seasonal trends in filtered or total recoverable mercury were detected from stream samples. Total mercury concentrations were calculated for the bulk sample on the basis of the percentage of the grains in the bulk sample whose diameters that were smaller than 0.0625 millimeters. Total mercury concentrations in bed sediment were generally higher for samples from reservoir sites compared to streams sites, although the highest total mercury concentration in bed sediment was from a stream site. Concentrations of total recoverable mercury in water samples from stream sites all fell within the general range for streams and lakes without on-site significant anthropogenic sources (for example, mercury mines or industrial pollution), whereas samples collected from eight reservoir sites had total mercury concentrations in a range characteristic of sites affected by mercury mines or industrial pollution. Results suggested that litterfall may be a source of mercury in streams, whereas atmospheric deposition is likely a dominant source for reservoirs; however, high concentrations of filtered and total recoverable mercury concentrations in the fall season in some reservoir-water samples may warrant further analysis of potential hydrologic factors. Mercury concentrations in all water and bed sediment samples were below levels expected to cause adverse effects to humans and aquatic biota, indicating that mercury levels at the study sites in the Triangle Area were unlikely to cause an immediate health risk to humans or aquatic organisms. The high variability among several sample replicates for total recoverable mercury, however, indicated that inferences from total recoverable mercury concentrations can be tenuous.

North Carolina↗

USGS2023

Survey of fish communities in tributaries to the Mohawk River, New York, 2019

Fish communities of the Mohawk River and associated sections of the New York State Canal System have been well documented but little information is available regarding the status of fish communities in the extensive network of tributaries that feed the Mohawk River. This lack of information is problematic because changes in species distributions or general ecosystem health may go unnoticed in the absence of baseline data. The need for baseline information has been made particularly urgent by the recent establishment of a high-profile invasive fish species in the mainstem of the Mohawk River, the round goby ( Neogobius melanostomus ). Round goby can adversely affect aquatic ecosystems in numerous ways and are able to colonize streams in addition to large rivers and lakes. This potential threat to the aquatic ecosystem, therefore, has created an urgent need to quantify the distribution and abundance of fish species inhabiting tributaries to the Mohawk River before round goby can begin colonizing these habitats. In response, the U.S. Geological Survey and the Mohawk River Basin Program of the New York State Department of Environmental Conservation initiated a study in 2019 to collect quantitative information on fish communities and stream habitats in tributaries to the Mohawk River that could be used in the future to determine the effects of round goby on local fish assemblages and identify substrate and other habitat characteristics that facilitate or inhibit colonization by round goby. Fish communities were surveyed at 20 sites on tributaries to the Mohawk River during summer 2019, using three-pass depletion backpack electrofishing surveys. The resulting data were used to produce quantitative estimates of fish population density and biomass for all species at each site. A total of 11,794 individual fish and 37 species were captured during the 20 surveys. Longnose dace ( Rhinichthys cataractae ), white sucker ( Catostomus commersonii ), blacknose dace ( Rhinichthys atratulus ), fantail darter ( Etheostoma flabellare ), and creek chub ( Semotilus atromaculatus ) were the most frequently encountered species, occurring at 18, 18, 17, 17, and 16 of the 20 sites, respectively. Six darter species, small bottom-dwelling fish that are highly vulnerable to displacement by round goby, were captured during the surveys, and at least one darter species was captured at all but one of the sites. Round goby were only captured at one site, Ninemile Creek near Rome, New York, where they occurred at a low density. Overall, the results indicated that round goby had not extensively colonized tributaries to the Mohawk River as of 2019, and the suite of data collected in this project should serve as a valuable baseline for future assessments of the effects of round goby and other stressors on aquatic ecosystems.

New York↗

USGS2018

Survival of whirling disease resistant rainbow trout fry in the wild: A comparison of two strains

Introduced pathogens can affect fish populations, and three main factors affect disease occurrence: the environment, host, and pathogen. Manipulating at least one of these factors is necessary for controlling disease. Myxobolus cerebralis , the parasite responsible for salmonid whirling disease, became established in Colorado during the 1990s and caused significant declines in wild Rainbow Trout Oncorhynchus mykiss populations. Attempts to re-establish Rainbow Trout have focused on manipulating salmonid host resistance. A Rainbow Trout strain known as GR × CRR was developed for stocking in Colorado by crossing a whirling-disease-resistant strain known as the German Rainbow Trout (GR) with the Colorado River Rainbow Trout (CRR). The GR × CRR fish exhibit resistance similar to that shown by GR, and survival and reproduction were expected to be similar to those of CRR. One disadvantage of stocking GR × CRR is that outcrossing and backcrossing could decrease resistance, and laboratory studies have indicated that this can occur. A potential disadvantage of stocking pure GR is lower survival due to domestication. To compare fry survival between the strains, a field experiment was conducted in 1.6-km reaches of nine Colorado streams. Each stream was stocked in August 2014 with 5,000 GR × CRR and 5,000 GR individuals. In October 2014, April 2015, and August 2015, apparent survival was assessed. Two laboratory predation experiments were also conducted. The field experiment revealed that short-term apparent survival was influenced by stream, and growth rate was influenced by strain and stream. However, after 12 months, there was no difference in apparent survival or growth rate between the GR and GR × CRR strains. Laboratory experiments showed that survival did not differ between the strains when confronted with Brown Trout Salmo trutta predation. Our results indicate that the GR strain is a viable option for stocking in streams where M. cerebralis is enzootic. Further evaluation is needed to determine whether GR fish will survive to maturity and reproduce.

Journal of Aquatic Animal Health↗

USGS2020

Hydrogeology and groundwater geochemistry of till confining units and confined aquifers in glacial deposits near Litchfield, Cromwell, Akeley, and Olivia, Minnesota, 2014–18

Confined (or buried) aquifers of glacial origin overlain by till confining units provide drinking water to hundreds of thousands of Minnesota residents. The sustainability of these groundwater resources is not well understood because hydraulic properties of till that control vertical groundwater fluxes (leakage) to underlying aquifers are largely unknown. The U.S. Geological Survey, Iowa State University, Minnesota Geological Survey, and Minnesota Department of Health investigated hydraulic properties and groundwater flow through till confining units using field studies and heuristic MODFLOW simulations. Till confining units in the following late-Wisconsinan stratigraphic units (with locations in parentheses) were characterized: Des Moines lobe till of the New Ulm Formation (Litchfield, Minnesota), Superior lobe till of the Cromwell and Aitkin Formations (Cromwell, Minn.), and Wadena lobe till of the Hewitt Formation (hydrogeology field camp [HFC] near Akeley, Minn.). Pre-Illinoian till of the Good Thunder formation (Olivia, Minn.) was also characterized. Hydraulic and geochemical field data were collected from sediment cores and a series of five piezometer nests. Each nest consisted of five to eight piezometers screened at short vertical intervals in hydrostratigraphic units including (if present) surficial aquifers, till confining units, confined/buried aquifers, and underlying bedrock. Till hydraulic conductivity was estimated from slug tests (horizontal [ K h ]) and constant-rate aquifer tests in the confined aquifer (vertical [ K v ]). Travel times through the till were evaluated with Darcy’s law and stable isotope concentrations. A series of heuristic MODFLOW simulations were used to evaluate groundwater fluxes through till across the range of till hydraulic properties and pumping rates observed at the field sites. The field data demonstrated variability in hydraulic properties between and within till stratigraphic units horizontally and vertically. The variability in hydraulic properties within and between sites resulted in substantial differences in groundwater flux through till. A conceptual understanding that emerges from the vertical till profiles is that they are not homogeneous hydrostratigraphic units with uniform properties; rather, each vertical sequence is a heterogeneous mixture of glacial sediment with differing abilities to transmit water. Till thicknesses varied from 60 to 166 feet, and till textures ranged from a sandy loam (Hewitt Formation, HFC site) to a silt loam/clay loam (Good Thunder formation, Olivia site). Till Kh varied by one to three orders of magnitude within each piezometer nest. Four piezometer nests had downward hydraulic gradients ranging from 0.04 to 0.56, and one nest had a slight upward hydraulic gradient of 0.02. The Cromwell, HFC, and Litchfield 1 sites were examples of “leaky” tills with high Kv (0.001 to 1.1 feet per day [ft/d]) and geometric mean Kh (0.03 to 0.07 ft/d) and extensive vertical hydraulic connectivity between the confined aquifer and the overlying till. Estimated groundwater travel times through these sites ranged from 1 to 81 years, and two of these sites had tritium throughout their till profiles. The tills at the other two sites, Olivia and Litchfield 2, were effective confining units that had low Kv (0.001 to 0.0005 ft/d) and geometric mean Kh (0.0002 to 0.004 ft/d). The till piezometers at these sites had no drawdown response to short-term (up to 10 hours for Olivia and up to 5 days for Litchfield) high-capacity pumping from the confined aquifer. Estimated groundwater travel times through the tills at these sites ranged from 165 to nearly 1,800 years, and tritium was only detected in the upper one-third of these till profiles. Across all sites, the till vertical anisotropy (ratio of K h to K v ) ranged by four orders of magnitude from 0.05 at the Cromwell nest to 70 at the Litchfield 1 nest. Stable isotopes of oxygen and hydrogen indicate that groundwater throughout all five till profiles is younger than the last glacial advance into Minnesota at about 11,000 years ago. The heuristic modeling demonstrated that, for understanding sustainability of groundwater pumping from confined aquifers, knowledge of till hydraulic properties is just as important as knowledge of aquifer hydraulic properties. Substantial differences in groundwater fluxes into and through till were observed across hydrogeologic settings representative of the field sites. Over long periods of time (hundreds of years), pumping-induced hydraulic gradients are established in confined aquifer systems and, even in low hydraulic conductivity tills, these pumping-induced hydraulic gradients increase leakage into and through till compared to ambient conditions. In conclusion, groundwater flowing vertically downward through till confining units (leakage) replenishes water pumped from confined aquifers. Till hydraulic properties, such as those presented in this report, provide important information that can be used to quantify leakage rates through till. Till hydraulic properties are variable over short distances and profoundly affect leakage rates, demonstrating the importance of site-specific till hydraulic data for evaluating the sustainability of groundwater withdrawals from confined aquifers.

Minnesota↗

USGS2012

Willamette Valley Ecoregion: Chapter 3 in Status and trends of land change in the Western United States--1973 to 2000

The Willamette Valley Ecoregion (as defined by Omernik, 1987; U.S. Environmental Protection Agency, 1997) covers approximately 14,458 km² (5,582 mi 2 ), making it one of the smallest ecoregions in the conterminous United States. The long, alluvial Willamette Valley, which stretches north to south more than 193 km and ranges from 32 to 64 km wide, is nestled between the sedimentary and metamorphic Coast Ranges (Coast Range Ecoregion) to the west and the basaltic Cascade Range (Cascades Ecoregion) to the east (fig. 1). The Lewis and Columbia Rivers converge at the ecoregion’s northern boundary in Washington state; however, the majority of the ecoregion falls within northwestern Oregon. Interstate 5 runs the length of the valley to its southern boundary with the Klamath Mountains Ecoregion. Topography here is relatively flat, with elevations ranging from sea level to 122 m. This even terrain, coupled with mild, wet winters, warm, dry summers, and nutrient-rich soil, makes the Willamette Valley the most important agricultural region in Oregon. Population centers are concentrated along the valley floor. According to estimates from the Oregon Department of Fish and Wildlife (2006), over 2.3 million people lived in Willamette Valley in 2000. Portland, Oregon, is the largest city, with 529,121 residents (U.S. Census Bureau, 2000). Other sizable cities include Eugene, Oregon; Salem (Oregon’s state capital); and Vancouver, Washington. Despite the large urban areas dotting the length of the Willamette Valley Ecoregion, agriculture and forestry products are its economic foundation (figs. 2,3). The valley is a major producer of grass seed, ornamental plants, fruits, nuts, vegetables, and grains, as well as poultry, beef, and dairy products. The forestry and logging industries also are primary employers of the valley’s rural residents (Rooney, 2008). These activities have affected the watershed significantly, with forestry and agricultural runoff contributing to river sedimentation and decreased water quality in the Willamette River and its tributary streams (Oregon Department of Fish and Wildlife, 2006). Recent years have seen a marked decline in forest health related to the increased frequency of multiyear droughts. Insect damage and other diseases also are present; however, drought- related water stress is the primary factor in coniferous-tree mortality (Oregon Department of Forestry, 2008). Trees most at risk include Douglas-fir ( Pseudotsuga menziesii ), grand fir ( Abies grandis ), and western red cedar ( Thuja plicata ). Overstocking by timber companies and planting on sites with poor conditions increase susceptibility. Over time, these problems may lead to changes in planting practices and the use of more drought-tolerant species such as ponderosa pine ( Pinus ponderosa ).

Oregon↗

USGS1967

Water resources inventory of Connecticut Part 2: Shetucket River Basin

The Shetucket River basin has a relatively abundant supply of water of generally good quality which is derived from precipitation that has fallen on the basin. Annual precipitation has ranged from about 30 inches to 75 inches and has averaged about 45 inches over a 35-year period. Approximately 20 inches of water are returned to the atmosphere each year by evaporation and transpiration; the remainder of the annual precipitation either flows overland to streams or percolates downward to the water table and ultimately flows out of the basin in the Shetucket River or as underflow through the deposits beneath. During the autumn and winter months precipitation normally is sufficient to cause a substantial increase in the amount of water stored underground and in surface reservoirs within the basins whereas in the summer most of the precipitation is lost through evaporation and transpiration, resulting in sharply reduced streamflow and lowered groundwater levels. The mean monthly storage of water in the basin on an average is 3.5 inches higher in November than it is in June. The amount of water that flows out of the basin in the Shetucket River represents the total amount of water potentlally available for use by man. Annual runoff from the entire basin above the Quinebaug River has ranged from about 13 to 42 inches since 1929, and has averaged about 23 inches (300 billion gallons). Although runoff indicates the total amount of water potentially available, it is usually not economically or legally feasible for man to use all of it. On the other hand, with increased development, It is possible that some water will be reused several times. The water available may be tapped as it flows through the area or is temporarily stored in streams, lakes, and aquifers. The amounts that can be developed vary from place to place and time to time, depending on the amount of precipitation, on the size of drainage area, on the thickness, permeability and areal extent of aquifers, and on the variations in chemical and physical quality of the water. Differences in streamflow from point to point are due primarily to differences in the proportion of stratified drift in the drainage basin above each point, which affect the timing of streamflow, and to differences in precipitation, which affect the amount of streamflow. Information on streamflow from gaging stations may be extended to ungaged sites by accounting for both of these factors ,in calculations. Future floods on the upper Willimantic River or the Shetucket River are unlikely to cause major damage so long as buildings are not constructed below the highest flood elevations to be expected with the present system of reservoirs for flood control. Ground water can be obtained from wells almost anywhere in the Shetucket River basin, but the amount obtainable from individual wells at any particular point depends upon the type and water-bearing properties of the aquifers present. For practical purposes, the earth materials in the basin comprise three aquifers--stratified drift, till, and bedrock, Stratified drift is the only aquifer generally capable of yielding more than 100 gpm to individual wells. This aquifer covers about 18 percent of the basin and occurs chiefly In lowlands where it overlies till or bedrock. Coefficient of permeability of the coarse-grained unit of stratified drift averages about 1,900 gpd per sq ft. Drilled, screened wells tapping this unit, are known to yield from 200 to 675 gpm. Dug wells in coarse-grained stratified drift should supply at least 2 gpm per foot of drawdown over an 8-hour period. Fine-grained stratified drift has an average coefficient of permeability of about 400 gpd per sq ft and can usually yield to dug wells supplies sufficient for household use. Till and bedrock are widespread in extent but can provide only small to moderate water supplies. Till is tapped chiefly by dug wells; permanent supplies of more than 200 gpd can be obtained from dug wells at a majority of sites in areas of till, but there are many sites where the till is too impermeable or too thin to provide this much water throughout the year. The coefficient of permeability of till ranges from about 0.2 gpd per sq ft to 55 gpd per sq it. Bedrock Is tapped chiefly by drilled wells, about 90 percent of which will supply at least 3 gpm. Very few, however, will supply more than 50 gpm. The amount of ground water potentially available In an area depends upon the amount of groundwater outflow, the amount of ground water in storage, and the quantity of water available by Induced infiltration from streams and lakes. From data on permeability, saturated thickness, recharge, yield from aquifer storage, well performance, and streamflow, preliminary estimates of ground-water availability can be made for any point in the basin. Long-term yields estimated for 15 areas especially favorable for development of large ground-water supplies ranged from 1.3 to 61.8 mgd. Detailed site studies to determine optimum yields, drawdowns, and spacing of individual wells are needed before major ground-water development is undertaken In these or other areas. The chemical quality of water in the Shetucket basin Is generally good to excellent. Samples of naturally occurring surface water collected from 32 sites contained less than 61 ppm of dissolved solids and less than 32 ppm of hardness. Water from wells is more highly mineralized than naturally occurring water from streams. Even so only 7 percent of wells sampled yielded water with more than 200 ppm of dissolved sol-ids and only 9 percent yielded water with more than 120 ppm of hardness. Even in the major rivers, which are used to transport industrial waste, the dissolved mineral content is less than 100 ppm and hardness rarely exceeds 40 ppm. One notable exception occurs in the lower reaches of Little River where an exceptional amount of industrial waste is discharged into the river near Versailles. This waste is particularly noticeable during low streamflow. Iron and manganese In both ground water and surface water are the only constituents whose concentrations commonly exceed recommended limits for domestic and industrial use. Most wells in the basin yield clear water with little or no iron or manganese, but distributed among them are wells with ground water that contains enough of these dissolved constituents to be troublesome for most uses. iron concentrations in naturally occurring stream water exceeded 0.3 ppm under tow-flow conditions at 20 percent of the sites sampled. Large concentrations of iron in stream water result from discharge of iron-bearing ground water or from the discharge of water from swamps. In swamps the iron is released largely from decaying vegetation. Ground water more than 30 feet below the land surface has a relatively constant temperature, usually between 48°F and 50°F. Water temperature in very shallow wells may fluctuate from about 38°F in February or March to about 55°F in late summer. Water temperature in the larger streams fluctuates much more widely, ranging from 32°F at least for brief periods in winter, to about 85°F occasionally during The quantity of suspended sediment transported by streams in the basin is negligible, though amounts large enough to be troublesome may occur locally at times. The total amount of water used In the Shetucket Rlver basin for all purposes during 1961 was about 5,810 million gallons~ which is equivalent to 208 gpd per person, Public water systems supplied the domestic needs of nearly half the population of the basin; 10 systems were sampled, all of which provided water of better quality than the U.S. Public Health Service suggests for drinking water standards.

Connecticut↗

USGS2012

Development of invertebrate community indexes of stream quality for the islands of Maui and Oahu, Hawaii

In 2009-10 the U.S. Geological Survey (USGS) collected physical habitat information and benthic macroinvertebrates at 40 wadeable sites on 25 perennial streams on the Island of Maui, Hawaiʻi, to evaluate the relations between the macroinvertebrate assemblages and environmental characteristics and to develop a multimetric invertebrate community index (ICI) that could be used as an indicator of stream quality. The macroinvertebrate community data were used to identify metrics that could best differentiate among sites according to disturbance gradients such as embeddedness, percent fines (silt and sand areal coverage), or percent agricultural land in the contributing basin area. Environmental assessments were conducted using land-use/land-cover data and reach-level physical habitat data. The Maui data were first evaluated using the previously developed Preliminary-Hawaiian Benthic Index of Biotic Integrity (P-HBIBI) to determine if existing metrics would successfully differentiate stream quality among the sites. Secondly, a number of candidate invertebrate metrics were screened and tested and the individual metrics that proved the best at discerning among the sites along one or more disturbance gradients were combined into a multimetric invertebrate community index (ICI) of stream quality. These metrics were: total invertebrate abundance, Class Insecta relative abundance, the ratio of Trichoptera abundance to nonnative Diptera abundance, native snail (hihiwai) presence or absence, native mountain shrimp (′δpae) presence or absence, native torrent midge ( Telmatogeton spp.) presence or absence, and native Megalagrion damselfly presence or absence. The Maui ICI classified 15 of the 40 sites (37.5 percent) as having "good" quality communities, 17 of the sites (42.5 percent) as having "fair" quality communities, and 8 sites (20 percent) as having "poor" quality communities, a classification that may be used to initiate further investigation into the causes of the poor rating. Additionally, quantitative macroinvertebrate samples collected from 31 randomly selected sites on Oʻahu in 2006-07 as part of the U.S. Environmental Protection Agency's Wadeable Stream Assessment (WSA) were used to refine and develop an ICI of stream quality for Oʻahu. The set of metrics that were included in the revised index were: total invertebrate abundance, Class Insecta relative abundance, the ratio of Trichoptera abundance to nonnative Diptera abundance, turbellarian relative abundance, amphipod relative abundance, nonnative mollusk abundance, and nonnative crayfish ( Procambarus clarkii ) and/or red cherry shrimp ( Neocaridina denticulata sinensis ) presence or absence. The Oʻahu ICI classified 10 of the 31 sites (32.3 percent) as "good" quality communities, 16 of the sites (51.6 percent) as "fair" quality communities, and 5 of the sites (16.1 percent) as "poor" quality communities. A reanalysis of 18 of the Oʻahu macroinvertebrate sites used to develop the P-HBIBI resulted in the reclassification of 3 samples. The beginning of a statewide ICI was developed on the basis of a combination of metrics from the Maui and Oʻahu ICIs. This combined ICI is intended to help identify broad problem areas so that the Hawaii State Department of Health (HIDOH) can prioritize their efforts on a statewide scale. Once these problem areas are identified, the island-wide ICIs can be used to more accurately assess the quality of individual stream reaches so that the HIDOH can prioritize their efforts on the most impaired streams. By using the combined ICI, 70 percent of the Maui sites and 10 percent of the Oʻahu WSA sites were designated as "good" quality sites; 25 percent of the Maui sites and 45 percent of the Oʻahu WSA sites were designated as "fair" quality sites; and 5 percent of the Maui sites and 45 percent of the Oʻahu WSA sites were designated as "poor" quality sites.

Hawai'i↗