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Challenge theme 1: Understanding and preserving ecological resources: Chapter 3 in United States-Mexican Borderlands: Facing tomorrow's challenges through USGS science

The notable biodiversity within the United States–Mexican border region is driven by the wide variety of natural landscapes in the area and its biologically unique transition zone of habitats for xeric, temperate, and subtropical species. Six diverse ecoregions cover the length of the border (fig. 3–1): California Coastal Sage, Chaparral, and Oak Woodlands; Sonoran Desert; Madrean Archipelago; Chihuahuan Desert; Southern Texas Plains; and Western Gulf Coastal Plain. The unique geology and many of the distinctive geographic features and climatic conditions that have given rise to the diverse populations of plants and animals found in the Borderlands also attract human populations. The number of people living in the Borderlands has increased dramatically over recent years, from about 7 million in 1980 to almost 12 million in 2003; the population is estimated to be more than 18 million by 2020 (Peach and Williams, 2003). The human population increase and associated change in land use have contributed to habitat fragmentation and habitat loss for native species, thus threatening their survival. Some ways in which humans negatively affect plants and animals in the Borderlands include dewatering of aquatic ecosystems, water pollution, introduction and spread of invasive species, outdoor lighting, military and border enforcement activity, and energy development and transmission.

United States-Mexico Borderlands↗

South Florida wetlands ecosystem; biogeochemical processes in peat

The South Florida wetlands ecosystem is an environment of great size and ecological diversity (figs. 1 and 2). The landscape diversity and subtropical setting of this ecosystem provide a habitat for an abundance of plants and wildlife, some of which are unique to South Florida. South Florida wetlands are currently in crisis, however, due to the combined effects of agriculture, urbanization, and nearly 100 years of water management. Serious problems facing this ecosystem include (1) phosphorus contamination producing nutrient enrichment, which is causing changes in the native vegetation, (2) methylmercury contamination of fish and other wildlife, which poses a potential threat to human health, (3) changes in the natural flow of water in the region, resulting in more frequent drying of wetlands, loss of organic soils, and a reduction in freshwater flow to Florida Bay, (4) hypersalinity, massive algal blooms, and seagrass loss in parts of Florida Bay, and (5) a decrease in wildlife populations, especially those of wading birds. This U.S. Geological Survey (USGS) project focuses on the role of organic-rich sediments (peat) of South Florida wetlands in regulating the concentrations and impact of important chemical species in the environment. The cycling of carbon, nitrogen, phosphorus, and sulfur in peat is an important factor in the regulation of water quality in the South Florida wetlands ecosystem. These elements are central to many of the contamination issues facing South Florida wetlands, such as nutrient enrichment, mercury toxicity, and loss of peat. Many important chemical and biological reactions occur in peat and control the fate of chemical species in wetlands. Wetland scientists often refer to these reactions as biogeochemical processes, because they are chemical reactions usually mediated by microorganisms in a geological environment. An understanding of the biogeochemical processes in peat of South Florida wetlands will provide a basis for evaluating the effects on water quality of (1) constructing buffer wetlands to alleviate nutrient contamination and (2) replumbing the ecosystem to restore natural water flow. The results may also suggest new approaches for solving problems of contamination and water quality in these wetlands. A second focus of this project will be on the geochemical history of the South Florida ecosystem. Peat is a repository of the history of past environmental conditions in the wetland. Before effective action can be taken to correct many of the problems facing these wetlands, we must first study the biogeochemistry of the peat at depth in order to understand whether current problems are the result of recent human activity or are part of a long-term natural cycle. Coordination with other (USGS) projects for South Florida is ongoing. These projects are studying the biological history of the ecosystem by using pollen and shells buried in the peat, together with procedures for dating the peat at various depths, to develop an overall ecosystem history model, with emphasis on the last 100 years.

Fact Sheet↗

Changes in water budgets and sediment yields from a hypothetical agricultural field as a function of landscape and management characteristics--A unit field modeling approach

Crop agriculture occupies 13 percent of the conterminous United States. Agricultural management practices, such as crop and tillage types, affect the hydrologic flow paths through the landscape. Some agricultural practices, such as drainage and irrigation, create entirely new hydrologic flow paths upon the landscapes where they are implemented. These hydrologic changes can affect the magnitude and partitioning of water budgets and sediment erosion. Given the wide degree of variability amongst agricultural settings, changes in the magnitudes of hydrologic flow paths and sediment erosion induced by agricultural management practices commonly are difficult to characterize, quantify, and compare using only field observations. The Water Erosion Prediction Project (WEPP) model was used to simulate two landscape characteristics (slope and soil texture) and three agricultural management practices (land cover/crop type, tillage type, and selected agricultural land management practices) to evaluate their effects on the water budgets of and sediment yield from agricultural lands. An array of sixty-eight 60-year simulations were run, each representing a distinct natural or agricultural scenario with various slopes, soil textures, crop or land cover types, tillage types, and select agricultural management practices on an isolated 16.2-hectare field. Simulations were made to represent two common agricultural climate regimes: arid with sprinkler irrigation and humid. These climate regimes were constructed with actual climate and irrigation data. The results of these simulations demonstrate the magnitudes of potential changes in water budgets and sediment yields from lands as a result of landscape characteristics and agricultural practices adopted on them. These simulations showed that variations in landscape characteristics, such as slope and soil type, had appreciable effects on water budgets and sediment yields. As slopes increased, sediment yields increased in both the arid and humid environments. However, runoff did not increase with slope in the arid environment as was observed in the humid environment. In both environments, clayey soils exhibited the greatest amount of runoff and sediment yields while sandy soils had greater recharge and lessor runoff and sediment yield. Scenarios simulating the effects of the timing and type of tillage practice showed that no-till, conservation, and contouring tillages reduced sediment yields and, with the exception of no-till, runoff in both environments. Changes in land cover and crop type simulated the changes between the evapotransporative potential and surface roughness imparted by specific vegetations. Substantial differences in water budgets and sediment yields were observed between most agricultural crops and the natural covers selected for each environment: scrub and prairie grass for the arid environment and forest and prairie grass for the humid environment. Finally, a group of simulations was performed to model selected agricultural management practices. Among the selected practices subsurface drainage and strip cropping exhibited the largest shifts in water budgets and sediment yields. The practice of crop rotation (corn/soybean) and cover cropping (corn/rye) were predicted to increase sediment yields from a field planted as conventional corn.

Scientific Investigations Report↗

Hydrologic variability and the application of Index of Biotic Integrity metrics to wetlands: a Great Lakes evaluation

Interest by land-management and regulatory agencies in using biological indicators to detect wetland degradation, coupled with ongoing use of this approach to assess water quality in streams, led to the desire to develop and evaluate an Index of Biotic Integrity (IBI) for wetlands that could be used to categorize the level of degradation. We undertook this challenge with data from coastal wetlands of the Great Lakes, which have been degraded by a variety of human disturbances. We studied six barrier beach wetlands in western Lake Superior, six drowned-river-mouth wetlands along the eastern shore of Lake Michigan, and six open shoreline wetlands in Saginaw Bay of Lake Huron. Plant, fish, and invertebrate communities were sampled in each wetland. The resulting data were assessed in various forms against gradients of human disturbance to identify potential metrics that could be used in IBI development. Our results suggested that the metrics proposed as potential components of an IBI for barrier beach wetlands of Lake Superior held promise. The metrics for Lake Michigan drowned-river-mouth wetlands were inconsistent in identifying gradients of disturbance; those for Lake Huron open embayment wetlands were yet more inconsistent. Despite the potential displayed by the Lake Superior results within the year sampled, we concluded that an IBI for use in Great Lakes wetlands would not be valid unless separate scoring ranges were derived for each of several sequences of water-level histories. Variability in lake levels from year to year can produce variability in data and affect the reproducibility of data collected, primarily due to extreme changes in plant communities and the faunal habitat they provide. Substantially different results could be obtained in the same wetland in different years as a result of the response to lake-level change, with no change in the level of human disturbance. Additional problems included limited numbers of comparable sites, potential lack of undisturbed reference sites, and variable effects of different disturbance types. We also evaluated our conclusions with respect to hydrologic variability and other major natural disturbances affecting wetlands in other regions. We concluded that after segregation of wetland types by geographic, geomorphic, and hydrologic features, a functional IBI may be possible for wetlands with relatively stable hydrology. However, an IBI for wetlands with unpredictable yet recurring influences of climate-induced, long-term high water periods, droughts, or drought-related fires or weather-related catastrophic floods or high winds (hurricanes) would also require differing scales of measurement for years that differ in the length of time since the last major natural disturbance. A site-specific, detailed ecological analysis of biological indicators may indeed be of value in determining the quality or status of wetlands, but we recommend that IBI scores not be used unless the scoring ranges are calibrated for the specific hydrologic history pre-dating any sampling year.

Wetlands↗

Bathymetry and vegetation in isolated marsh and cypress wetlands in the northern Tampa Bay Area, 2000-2004

Wetland bathymetry and vegetation mapping are two commonly used lines of evidence for assessing the hydrologic and ecologic status of expansive coastal and riverine wetlands. For small isolated freshwater wetlands, however, bathymetric data coupled with vegetation assessments are generally scarce, despite the prevalence of isolated wetlands in many regions of the United States and the recognized importance of topography as a control on inundation patterns and vegetation distribution. In the northern Tampa Bay area of west-central Florida, bathymetry was mapped and vegetation was assessed in five marsh and five cypress wetlands. These 10 isolated wetlands were grouped into three categories based on the effects of ground-water withdrawals from regional municipal well fields: natural (no effect), impaired (drier than natural), and augmented (wetlands with artificially augmented water levels). Delineation of the wetland perimeter was a critical component for estimating wetland-surface area and stored water volume. The wetland perimeter was delineated by the presence of Serenoa repens (the 'palmetto fringe') at 9 of the 10 sites. At the 10th site, where the palmetto fringe was absent, hydric-soils indicators were used to delineate the perimeter. Bathymetric data were collected using one or more techniques, depending on the physical characteristics of each wetland. Wetland stage was measured hourly using continuous stage recorders. Wetland vegetation was assessed semiannually for 2 1/2 years in fixed plots located at three distinct elevations. Vegetation assessments were used to determine the community composition and the relative abundance of obligate, facultative wet, and facultative species at each elevation. Bathymetry maps were generated, and stage-area and stage-volume relations were developed for all 10 wetlands. Bathymetric data sets containing a high density of data points collected at frequent and regular spatial intervals provided the most useful stage-area and stage-volume relations. Bathymetric maps of several wetlands also were generated using a low density of data points collected along transect lines or contour lines. In a comparative analysis of the three mapping approaches, stage-area and stage-volume relations based on transect data alone underestimated (by 50-100 percent over certain ranges of stage) the wetland area and volume compared to results using a high density of data points. Adding data points collected along one elevation contour below the wetland perimeter to the transect data set greatly improved the agreement of the resulting stage-area and stage-volume relations to the high-density mapping approach. Stage-area relations and routinely monitored stage data were used to compare and contrast the average flooded area in a natural marsh and an impaired marsh over a 2-year period. Vegetation assessments used together with flooded-area information provided the potential for extrapolating vegetation results from points or transects to wetlands as a whole. A comparison of the frequency of flooding of different areas of the wetland and the species composition in vegetation plots at different elevations indicated the dependence of vegetation on inundation frequency. Because of the broad tolerances of many wetlands plants to a range of inundation conditions, however, vegetation assessments alone provided less definitive evidence of the hydrologic differences between the two sites, and hydrologic changes occurring during the 2 years, than the flooded-area frequencies. Combining flooded-area frequencies with vegetation assessments could provide a more versatile and insightful approach for determining the ecological status of wetlands than using vegetation and stage data alone. Flooded-area frequencies may further provide a useful approach for assessing the ecological status of wetlands where historical vegetation surveys and stage data are lacking. Comparing the contemporary flooded-area frequencies a

Scientific Investigations Report↗

Wake Atoll: Evaluation of plant biosecurity

Introduced organisms can cause substantial effects across most landscapes. Island ecosystems, especially tropical islands, are at elevated risk from introduced organisms. The risks are even higher for tropical islands with moderate or high levels of transit, yet this can be minimized by application of appropriate biosecurity requirements. In this study, we examined the potential for non-native plant species introductions, especially invasive plants, via shipping containers to be transported to Wake Atoll, one of the most remote terrestrial land masses in the Pacific Ocean. We sowed debris collected from 30 shipping containers in a greenhouse experiment to determine if any live plants could be germinated, identify any species that germinated, and ascertain if they posed a threat if they were to be transported to Wake Atoll and became established there. During this study 23 plant species were identified, including ferns, monocots, and dicots. Fifteen of these species reached reproductive maturity over the course of seven months. From previous plant surveys on the atoll, we know that 13 of the 23 identified species were not previously recorded, and four species are already known to be invasive on Wake Atoll. This study provides insight into the potential for debris found in shipping containers to contribute to the spread of non-native, possibly invasive species. This information may help with the refinement of biosecurity strategies to prevent the accidental introduction of invasive species into sensitive natural areas such as Wake Atoll.

Hawaii Cooperative Studies Unit Technical Report↗

Plant diversity shifts with drying and wetting cycles following removal of poplar plantations in Dongting Lake, China

Dongting Lake, the second largest lake in China, plays a crucial role in maintaining regional ecological security by providing key habitats for waterbirds. This study examined how hydrology and topography (ditches and mounds) together generate fine-scale wet–dry gradients that shape species establishment and successional trajectories. Over the past decade, vegetation restoration has been implemented through the removal of poplar plantations. We selected sites in West Dongting Lake representing different stages following poplar removal, including active plantations (Poplar), one-year (1Yr) and five-year (5Yr) restored sites, and natural floodplain reference sites. Analyses of seasonal water-level dynamics over several years revealed distinct hydrological regimes among restoration stages, with differences in inundation duration and amplitude corresponding to ditch–mound topography. Species diversity indicators showed that species richness was highest in Poplar (37 species) and lowest in Reference sites (14 species), with exotic species richness following the same trend. The lowest Cody index occurred between 1Yr and Reference sites, while the Jaccard similarity differed significantly among site pairs, with lower similarity observed in comparisons with the Reference site. Non-metric Multidimensional Scaling (NMDS) analysis indicated minimal overlap between Poplar and Reference sites, with 1Yr and 5Yr sites clustering together but remaining distinct from the Reference site. These results suggest that poplar cultivation and its associated mound-ditch topography have altered hydrological and community structure of the wetland, facilitating the persistence of exotic species. Natural recolonization is driven by the interaction between seasonal water-level dynamics and topography, which regulate inundation duration and wet–dry cycles. Effective restoration may require removal of poplar plantations and regrading of artificial ditches and mounds to restore natural hydrological connectivity to support vegetation recovery in these subtropical monsoonal wetlands.

Dongting Lake↗

Organic matters: Investigating the sources, transport, and fate of organic matter in Fanno Creek, Oregon

The term organic matter refers to the remnants of all living material. This can include fallen leaves, yard waste, animal waste, downed timber, or the remains of any other plant and animal life. Organic matter is abundant both on land and in water. Investigating organic matter is necessary for understanding the fate and transport of carbon (a major constituent of organic matter). Organic matter is necessary for maintaining a healthy ecosystem. It participates in a wide range of ecological functions, such as supplying food to the microbes that are part of the foundation of the food chain. Organic matter also plays a role in many other natural functions, including the binding and transport of some trace metals and controlling how light is absorbed in the water column. Organic matter in a stream can be found in many places, such as in the leaves that have fallen from a tree (termed "leaf litter"), in algae floating in the stream or attached to rocks, as part of the soil, or even suspended or dissolved in the water. The U.S. Geological Survey (USGS), in cooperation with Clean Water Services, recently completed an investigation into the sources, transport, and fate of organic matter in the Fanno Creek watershed. The information provided by this investigation will help resource managers to implement strategies aimed at decreasing the excess supply of organic matter that contributes to low dissolved-oxygen levels in Fanno Creek and downstream in the Tualatin River during summer. This fact sheet summarizes the findings of the investigation.

Oregon↗

Structural and functional effects of herbicides on non-target organisms in aquatic ecosystems with an emphasis on atrazine

Herbicide use has increased dramatically around the world over the past 6 decades (Gianessi and Reigner, 2007). Few herbicides were in use in the 1950s. However, by 2001 approximately 1.14 billion kilograms of herbicides were applied globally for the control of undesireable vegetation in agricultural, silvicultural, lawncare, aquacultural, and irrigation/recreational water management activities (Kiely et al., 2004). Twenty-eight percent of the total mass of herbicides is applied in the United States, with the remaining 72 percent being applied elsewhere around the globe (Kiely et al., 2004). Herbicides represent 36% of global pesticide use, followed by insecticides (25%), fungicides (10%) and other chemical classes (Kiely et al., 2004). Agricultural production accounts for approximately 90% of herbicide use in the U.S. (Kiely et al., 2004). Gianessi and Reigner (2007) indicated that herbicides are routinely used on more than 90% of the area designated for large commercial crops including corn, soybeans, cotton, sugar beets, peanuts, and rice. Increased farm mechanization, technological advancements in production of inexpensive sources of inorganic nitrogen fertilizer (e.g., anhydrous ammonia), and conversion of forest, grassland, and wetland habitats to cropland has led to a tremendous increase in global food production over the past half-century. Herbicides have augmented advances in large-scale agricultural systems and have largely replaced mechanical and hand-weeding control mechanisms (Gianessi and Reigner, 2007). The wide-spread use of herbicides in agriculture has resulted in frequent chemical detections in surface and groundwaters (Gilliom, 2007). The majority of herbicides used are highly water soluble and are therefore prone to runoff from terrestrial environments. In additon, spray drift and atmospheric deposition can contribute to herbicide contamination of aquatic environments. Lastly, selected herbicides are deliberately applied to aquatic environments for controlling nuisance aquatic vegetation. Although aquatic herbicide exposure has been widely documented, these exposures are not necessarily related to adverse non-target ecological effects on natural communities in aquatic environments. This chapter evaluates the potential for effects of herbicides on the structure and function of aquatic envrionments at the population, community, and ecosystem levels of biological organization. In this manuscript I examine several critical aspects of the subject matter area: primary herbicides in use and chemical modes of action; the regulatory process used for registration and risk assessment of herbicides; data regarding non-target risks and the relative sensitivity of aquatic plants, inveretebrates, and fish to herbicides; and emerging areas of science regarding the potential for endocrine-disrupting effects of herbicides on aquatic vertebrates. Much of the focus of this paper is on atrazine due to the extensive database which exists regarding its fate and effects.

Book chapter↗

Impact of oil production releases on soil chemical properties at the Osage-Skiatook Petroleum Environmental Research Project Site

A site characterization study was conducted at an old oil production area where highest activity occurred during the 1930's. Two site locations referred to as OSPER are along the shoreline of Skiatook Lake northwest of Tulsa, Oklahoma. Crude oil and brine water releases have impacted soils, surface and ground water, and the Oak cross-timber ecosystem. Local effects include soil salinization with destruction of plant cover and soil texture, and resultant deep erosion. Stress on affected vegetation is prevalent, but some grass revegetation has occurred. Surface soil samples and vertical profile cores to four feet have been collected and analyzed for salinity, organic matter, petroleum hydrocarbons, texture, nitrates, and dehydrogenase activity. Native grass re-establishment was inversely related to soil salinity and extent of erosion. As expected oil wastes increased the soil organic matter, greatly over surface controls near 0.3%.. Natural soil nitrates were at a low level near 0.2 ppm, but sufficient to support native grasses.

Oklahoma↗

Water quality of the Swatara Creek Basin, PA

The Swatara Creek of the Susquehanna River Basin is the farthest downstream sub-basin that drains acid water (pH of 4.5 or less) from anthracite coal mines. The Swatara Creek drainage area includes 567 square miles of parts of Schuylkill, Berks, Lebanon, and Dauphin Counties in Pennsylvania. To learn what environmental factors and dissolved constituents in water were influencing the quality of Swatara Creek, a reconnaissance of the basin was begun during the summer of 1958. Most of the surface streams and the wells adjacent to the principal tributaries of the Creek were sampled for chemical analysis. Effluents from aquifers underlying the basin were chemically analyzed because ground water is the basic source of supply to surface streams in the Swatara Creek basin. When there is little runoff during droughts, ground water has a dominating influence on the quality of surface water. Field tests showed that all ground water in the basin was non-acidic. However, several streams were acidic. Sources of acidity in these streams were traced to the overflow of impounded water in unworked coal mines. Acidic mine effluents and washings from coal breakers were detected downstream in Swatara Creek as far as Harper Tavern, although the pH at Harper Tavern infrequently went below 6.0. Suspended-sediment sampling at this location showed the mean daily concentration ranged from 2 to 500 ppm. The concentration of suspended sediment is influenced by runoff and land use, and at Harper Tavern it consisted of natural sediments and coal wastes. The average daily suspended-sediment discharge there during the period May 8 to September 30, 1959, was 109 tons per day, and the computed annual suspended-sediment load, 450 tons per square mile. Only moderate treatment would be required to restore the quality of Swatara Creek at Harper Tavern for many uses. Above Ravine, however, the quality of the Creek is generally acidic and, therefore, of limited usefulness to public supplies, industries and recreation. In general, the quality of Swatara Creek improves after it mixes with water from the Upper Little and Lower Little Swatara Creeks, which converge with the main stream near Pine Grove. Jonestown is the first downstream location where Swatara Creek contains bicarbonate ion most of the time, and for the remaining downstream length of the stream, the concentration of bicarbonate progressively increases. Before the stream enters the Susquehanna River, chemical and diluting processes contributed by tributaries change the acidic calcium sulfate water, which characterizes the upper Swatara, to a calcium bicarbonate water. A major tributary to Swatara Creek is Quittapahilla Creek, which drains a limestone region and has alkaline characteristics. Effluents from a sewage treatment plant are discharged into this stream west of Lebanon. Adjacent to the Creek are limestone quarries and during the recovery of limestone, ground water seeps into the mining areas. This water is pumped to upper levels and flows over the land surface into Quittapahilla Creek. As compared with the 1940's, the quality of Swatara Creek is better today, and the water is suitable for more uses. In large part, this improvement is due to curtailment of anthracite coal mining and because of the controls imposed on new mines, stripping mines, and the related coal mining operations, by the Pennsylvania Sanitary Water Board. Thus, today (1962) smaller amounts of coal mine wastes are more effectively flushed and scoured away with each successive runoff during storms that affect the drainage basin. Natural processes neutralizing acid water in the stream by infiltration of alkaline ground water through springs and through the streambed are also indicated.

Pennsylvania↗

Does post-fire recovery of native grasses across abiotic-stress and invasive-grass gradients match theoretical predictions, in sagebrush steppe?

Interactions among species can strongly affect how plant communities reassemble after disturbances, and variability among native and invasive species across environmental gradients must be known in order to manage plant-community recovery. The stress-gradient hypothesis (SGH) predicts species interactions will be more positive in abiotically stressful conditions and conversely, more negative in benign conditions, and the resistance-resilience concept (RRC) may predict where and when invasions will complicate ecosystem recovery. We evaluated how abiotic stress and biotic interactions determine native bunchgrass abundances across environmental gradients using additive models of cover data from over 500 plots re-measured annually for 5 years as they recovered naturally (untreated) after a megafire (>100,000 ha) in sagebrush steppe threated by the invasive-grass and fire cycle. The species included native bunchgrasses, bluebunch wheatgrass ( Pseudoroegneria spicata ) and Sandberg bluegrass ( Poa secunda ), and the exotic and invasive annual cheatgrass ( Bromus tectorum ). We asked whether associations between native bunchgrasses and cheatgrass were context dependent and if the SGH could help predict interspecific associations between species in a semiarid environment. The association of cover of each native bunchgrass to cheatgrass was not uniform, and instead varied from neutral to negative across environmental gradients in both space and time (i.e., weather), to which the species had nonlinear and sometimes threshold-like responses. Consistent with the SGH, bunchgrasses were generally more negatively related to cheatgrass (i.e., putative competition) in conditions which increased the cover of each bunchgrass – which were higher elevations and temperatures and lower solar heatload, and, for Sandberg bluegrass, drier conditions. There were few indications of positive interactions (i.e., putative facilitation) in stressful conditions, and instead associations were again negative, albeit weaker, in some of the conditions evaluated. Synthesis . These findings demonstrate that the negative association among native bunchgrasses and cheatgrass is context dependent and is determined by the abundances of both interacting species which is driven by environmental stress. This led to a hypothesis that together Sandberg bluegrass and bluebunch wheatgrass provide complementary resistance to cheatgrass at the landscape level, despite their different ecology and contrary to the management preference for bluebunch wheatgrass. Sandberg bluegrass might be critical for providing resistance against cheatgrass where invasion potential is greatest, i.e., at lower elevations, where bluebunch wheatgrass is scarce.

Global Ecology and Conservation↗

Hydrogeologic characterization, groundwater chemistry, and vulnerability assessment, Ute Mountain Ute Reservation, Colorado and Utah

The U.S. Geological Survey, in cooperation with the Ute Mountain Ute Tribe (UMUT), initiated a study in 2016 to increase understanding of the hydrogeology and chemistry of groundwater within select areas of the Ute Mountain Ute Reservation (UMUR) in Colorado and Utah, identify vulnerabilities to the system and other natural resources, and outline information needs to aid in the understanding and protection of groundwater resources. The results presented for this study can be used to support the UMUT’s goal of protecting their vital groundwater resources on the UMUR. Hydrogeologic conditions were characterized for the surficial aquifer contained in Quaternary-age unconsolidated surficial deposits and the Dakota aquifer contained in the Cretaceous-age Dakota Sandstone. In the surficial aquifer, median depth to water ranges from about 5.4 to 17.2 feet below land surface in the Farm and Ranch Enterprise area and 11 to 34 feet below land surface in the Towaoc area, and the water table slopes generally southwest or south. A map of depth to the top of the Dakota Sandstone was constructed from existing well data. Depths range from zero in outcrop areas to more than 3,000 feet below land surface on mesas in the southeastern part of the UMUR. Groundwater-chemistry data were collected by the UMUT from 13 springs and 31 wells from 1996 through 2017. Specific conductance was much lower for samples from springs than from wells; median values were 512 and 6,024 microsiemens per centimeter at 25 degrees Celsius, respectively. Spring samples were well oxygenated. A few well samples were anoxic (dissolved oxygen concentrations less than 0.5 milligrams per liter [mg/L]), indicating reducing conditions in the aquifer. About 75 percent of spring samples had fresh water (total dissolved solids concentrations less than 1,000 mg/L), and about 85 percent of well samples had brackish or highly saline water (total dissolved solids concentrations greater than 1,000 mg/L). Water type for springs on the Ute Mountains was calcium bicarbonate. Lower-altitude springs had a calcium-sulfate water type. Most well samples had sodium as the dominant cation, and sulfate, bicarbonate, and chloride as the dominant anions. Fluoride concentrations in about 45 percent of well samples were greater than an agricultural-use standard of 2 mg/L. Nitrate plus nitrite concentrations in most spring and well samples were less than about 1.6 mg/L per liter. Concentrations in samples from wells in the irrigated agricultural area were elevated; the maximum concentration was 78.5 mg/L. About one-half of the trace-element samples had concentrations that were less than laboratory reporting limits. Only aluminum, arsenic, and selenium in spring samples, and boron and selenium in well samples, were detected at concentrations greater than surface-water standards or water-quality standards for agricultural use of groundwater. Only three organic compounds, the pesticides alachlor and atrazine and the volatile organic compound di(2-ethylhexyl) phthalate, were detected in well samples. The Escherichia coli bacteria was detected in 47 and 23 percent of samples from wells and springs, respectively. The E. coli detections included samples from three culturally significant springs, which did not meet the UMUT cultural-use standard of total absence of E. coli. Tritium and carbon-14 were the primary environmental tracers used for interpreting groundwater ages for Lopez 2 Spring and five wells (AP–1, 5000 Block, Cottonwood Spring, Goodknight, and SE Toe). Water from the AP–1 well contained a mixture of pre- and post-1950s recharge. Tritium and carbon-14 recharge ages for Lopez 2 Spring (post-1950s in age), Goodknight and SE Toe wells (pre-1950s in age), and Cottonwood Spring well (primarily pre-1950s in age) are supported by helium-4 data. The helium-4 data for the 5000 Block well are inconsistent with the tritium and carbon-14 age of pre-1950s recharge because of interference caused by high methane concentrations in the water. Springs and surficial deposits are more vulnerable to contamination from anthropogenic chemicals than deeper bedrock wells. Bedrock aquifers are vulnerable in areas where the geologic formations containing the aquifers are exposed at the land surface. Groundwater in deep bedrock aquifers is likely thousands of years old and is not currently affected by present-day land uses. Both shallow and deep groundwater are vulnerable to naturally occurring salts and minerals, such as of total dissolved solids, major ions, nitrate, and trace elements. Effects of a changing climate on water resources and other ecological characteristics of the UMUR could include changes in evapotranspiration, a decrease in snowpack, decreased aquifer recharge and flow of springs, a decrease in soil moisture, and increased occurrence of wildfires and forest mortality. Of particular interest for the UMUT are possible effects of a changing climate on medicinal and culturally important plants and springs Several information needs were identified during this study that would aid in the understanding and protection of groundwater resources on the UMUR. These include well-completion information for bedrock wells, the collection of environmental tracer data at additional wells, the addition of methane and hydrocarbon analysis to well sampling plans, and the resampling of springs and wells that were last sampled in 2002 or earlier.

Colorado↗

Exploring and mitigating plague for One Health purposes

Purpose of Review In 2020, the Appropriations Committee for the U.S. House of Representatives directed the CDC to develop a national One Health framework to combat zoonotic diseases, including sylvatic plague, which is caused by the flea-borne bacterium Yersinia pestis . This review builds upon that multisectoral objective. We aim to increase awareness of Y. pestis and to highlight examples of plague mitigation for One Health purposes (i.e., to achieve optimal health outcomes for people, animals, plants, and their shared environment). We draw primarily upon examples from the USA, but also discuss research from Madagascar and Uganda where relevant, as Y. pestis has emerged as a zoonotic threat in those foci. Recent Findings Historically, the bulk of plague research has been directed at the disease in humans. This is not surprising, given that Y. pestis is a scourge of human history. Nevertheless, the ecology of Y. pestis is inextricably linked to other mammals and fleas under natural conditions. Accumulating evidence demonstrates Y. pestis is an unrelenting threat to multiple ecosystems, where the bacterium is capable of significantly reducing native species abundance and diversity while altering competitive and trophic relationships, food web connections, and nutrient cycles. In doing so, Y. pestis transforms ecosystems, causing “shifting baselines syndrome” in humans, where there is a gradual shift in the accepted norms for the condition of the natural environment. Eradication of Y. pestis in nature is difficult to impossible, but effective mitigation is achievable; we discuss flea vector control and One Health implications in this context. Summary There is an acute need to rapidly expand research on Y. pestis , across multiple host and flea species and varied ecosystems of the Western US and abroad, for human and environmental health purposes. The fate of many wildlife species hangs in the balance, and the implications for humans are profound in some regions. Collaborative multisectoral research is needed to define the scope of the problem in each epidemiological context and to identify, refine, and implement appropriate and effective mitigation practices.

Current Tropical Medicine Reports↗

Reconnaissance investigation of water quality, bottom sediment, and biota associated with irrigation drainage in the Vermejo Project area and the Maxwell National Wildlife Refuge, Colfax County, northeastern New Mexico, 1993

Based on findings of limited studies during 1989-92, a reconnaissance investigation was conducted in 1993 to assess the effects of the Vermejo Irrigation Project on water quality in the area of the project, including the Maxwell National Wildlife Refuge. This project was part of a U.S. Department of the Interior National Irrigation Water-Quality Program to determine whether irrigation drainage has caused or has the potential to cause significant harmful effects on human health, fish, and wildlife and whether irrigation drainage may adversely affect the suitability of water for other beneficial uses. For this study, samples of water, sediment, and biota were collected from 16 sites in and around the Vermejo Irrigation Project prior to, during the latter part of, and after the 1993 irrigation season (April, August-September, and November, respectively). No inorganic constituents exceeded U.S. Environmental Protection Agency drinking-water standards. The State of New Mexico standard of 750 micrograms per liter for boron in irrigation water was exceeded at three sites (five samples), though none exceeded the livestock water standard of 5,000 micrograms per liter. Selenium concentrations exceeded the State of New Mexico chronic standard of 2 micrograms per liter for wildlife and fisheries water in at least eight samples from five sites. Bottom-sediment samples were collected and analyzed for trace elements and compared to concentrations of trace elements in soils of the Western United States. Concentrations of three trace elements at eight sites exceeded the upper values of the expected 95-percent ranges for Western U.S. soils. These included molybdenum at one site, selenium at seven sites, and uranium at four sites. Cadmium and copper concentrations exceeded the National Contaminant Biomonitoring Program 85th percentile in fish from six sites. Average concentrations of selenium in adult brine flies (33.7 μ g/g dry weight) were elevated above concentrations in other invertebrates. Concentrations of other elements were below their respective toxicity levels. Plants, invertebrates, fish, and fish fillets were collected and analyzed. These analyses were compared to diagnostic criteria and to each other to determine the extent of bioaccumulation of trace elements. Plants contained larger dry weight concentrations of aluminum, arsenic, boron, chromium, iron, lead, magnesium, manganese, nickel, and vanadium than invertebrates and fish. Adult brine flies, gathered from playas, contained larger geometric mean dry weight concentrations of boron, magnesium, and selenium than other invertebrates. Of all samples collected, the largest mercury concentrations were found in fish fillets, although these concentrations were below levels of concern. Mercury and selenium bioaccumulation was evident in various habitats of the study area. Biological samples from Natural playa, an endemic wetland, and Half playa, a playa that receives additional water through seepage and irrigation delivery canals, generally had elevated concentrations of boron, iron, magnesium, and selenium than samples from reservoir and river sites. Selenium concentrations were lowest in biota from the two reservoir sites, although a wetland immediately downstream from the dam impounding Lake No. 13 (created by seepage from the reservoir) had elevated concentrations of selenium in biota. The geometric mean selenium concentration of whole-fish samples, except those from Lakes No. 13 and No. 14, exceeded the 5- μ g/g dry weight selenium concentration that demarcates the approximate lower limit of the threshold range of concentrations that have freen associated with adverse effects on piscine reproduction. Biota collected on and in the area around Maxwell National Wildlife Refuge contained concentrations of selenium that are in the lower range of threshold values that have been associated (dietarily) with risks of avian reproductive abnormalities. Bottom-sediment samples from two sites downstream from the irrigation project were collected and analyzed for 23 organic compounds (principally organochlorine pesticide residues). Three compounds were detected at the two sites: DDD was found at 0.2 microgram per kilogram, DDE was detected at 0.1 microgram per kilogram at both sites, and chlordane was detected at 1 microgram per kilogram. None of the 28 whole-fish and fillet samples analyzed for PCB and organochlorine pesticide residues contained any of the 23 organic compounds tested for at concentrations higher than the analytical reporting limit (less than 0.01 μ g/g wet weight). Concentrations of inorganic analytes were generally within established guidelines or expected concentrations for water, sediment, and biota. lirigation-return flows were found to be unrelated to adverse effects in biota.

New Mexico↗

Final Report: Five years of monitoring reconstructed freshwater tidal wetlands in the urban Anacostia River (2000-2004)

The Anacostia River in Washington, D.C. USA consisted of over 809 hectares (2000 acres) of freshwater tidal wetlands before mandatory dredging removed most of them in the first half of the 20th century. Much of this13 kilometer (8 mile) reach was transferred to the National Park Service (NPS). Planning processes in the 1980?s envisioned a restoration (rejuvenation) of some wetlands for habitat, aesthetics, water quality and interpretative purposes. Subsequently, the U.S. Army Corps of Engineers in a cost share agreement with the District of Columbia reconstructed wetlands on NPS lands at Kenilworth - 12.5 hectares (1993), Kingman - 27 hectares (2000), a Fringe Marsh - 6.5 hectares (2003) and is currently constructing Heritage Marsh - 2.5 hectares (2005/2006). The USGS Patuxent Wildlife Research Center in conjunction with the University of Maryland Biological Engineering Department was contracted to conduct post-reconstruction monitoring (2000-2004) to document the relative success and progress of the Kingman Marsh reconstruction primarily based on vegetative response but also in conjunction with seed bank and soil characteristics. Results from Kingman were compared to Kenilworth Marsh (reconstructed 7 years prior), Dueling Creek Marsh (last best remaining freshwater tidal wetland bench in the urbanized Anacostia watershed) and Patuxent River Marsh (in a more natural adjacent watershed). Vegetation establishment was initially strong at Kingman, but declined rapidly as measured by cover, richness, diversity , etc. under grazing pressure from resident Canada geese and associated reduction in sediment levels. This decline did not occur at the other wetlands. The decline occurred despite a substantial seed bank that was sustained primarily be water born propagules. Soil development, as true for most juvenile wetlands, was slow with almost no organic matter accumulation. By 2004 only two of 7 planted species remained (mostly Peltandra virginica) at Kingman which did provide almost 50% of the approximately 1/3 total vegetation cover remaining.

Book↗

Five years (2000-2004) of post-reconstruction monitoring of freshwater tidal wetlands in the urban Anacostia River, Washington, D.C. USA

The Anacostia River in Washington, D.C. USA consisted of over 809 hectares (2000 acres) of freshwater tidal wetlands before mandatory dredging removed most of them in the first half of the 20th century. Much of this13 kilometer (8 mile) reach was transferred to the National Park Service (NPS). Planning processes in the 1980's envisioned a restoration (rejuvenation) of some wetlands for habitat, aesthetics, water quality and interpretative purposes. Subsequently, the U.S. Army Corps of Engineers in a cost share agreement with the District of Columbia reconstructed wetlands on NPS lands at Kenilworth - 12.5 hectares (1993), Kingman 27 hectares (2000), a Fringe Marsh - 6.5 hectares (2003) and is currently constructing Heritage Marsh - 2.5 hectares (2005/2006). The USGS Patuxent Wildlife Research Center in conjunction with the University of Maryland Biological Engineering Department was contracted to conduct post-reconstruction monitoring (2000-2004) to document the relative success and progress of the Kingman Marsh reconstruction primarily based on vegetative response but also in conjunction with seed bank and soil characteristics. Results from Kingman were compared to Kenilworth Marsh (reconstructed 7 years prior), Dueling Creek Marsh (last best remaining freshwater tidal wetland bench in the urbanized Anacostia watershed) and Patuxent River Marsh (in a more natural adjacent watershed). Vegetation establishment was initially strong at Kingman, but declined rapidly as measured by cover, richness, diversity, etc. under grazing pressure from resident Canada geese and associated reduction in sediment levels. This decline did not occur at the other wetlands. The decline occurred despite a substantial seed bank that was sustained primarily be water born propagules. Soil development, as true for most juvenile wetlands, was slow with almost no organic matter accumulation. By 2004 only two of 7 planted species remained (mostly Peltandra virginica) at Kingman which did provide almost 50% of the approximately 1/3 total vegetation cover remaining.

Book chapter↗

Pollen-based biome reconstructions for Latin America at 0, 6000 and 18 000 radiocarbon years ago

The biomisation method is used to reconstruct Latin American vegetation at 6000±500 and 18 000±1000 radiocarbon years before present ( 14 C yr BP) from pollen data. Tests using modern pollen data from 381 samples derived from 287 locations broadly reproduce potential natural vegetation. The strong temperature gradient associated with the Andes is recorded by a transition from high altitude cool grass/shrubland and cool mixed forest to mid-altitude cool temperate rain forest, to tropical dry, seasonal and rain forest at low altitudes. Reconstructed biomes from a number of sites do not match the potential vegetation due to local factors such as human impact, methodological artefacts and mechanisms of pollen representivity of the parent vegetation. At 6000±500 14 C yr BP 255 samples are analysed from 127 sites. Differences between the modern and the 6000±500 14 C yr BP reconstruction are comparatively small; change relative to the modern reconstruction are mainly to biomes characteristic of drier climate in the north of the region with a slight more mesic shift in the south. Cool temperate rain forest remains dominant in western South America. In northwestern South America a number of sites record transitions from tropical seasonal forest to tropical dry forest and tropical rain forest to tropical seasonal forest. Sites in Central America show a change in biome assignment, but to more mesic vegetation, indicative of greater plant available moisture, e.g. on the Yucatán peninsula sites record warm evergreen forest, replacing tropical dry forest and warm mixed forest presently recorded. At 18 000±1000 14 C yr BP 61 samples from 34 sites record vegetation reflecting a generally cool and dry environment. Cool grass/shrubland is prevalent in southeast Brazil whereas Amazonian sites record tropical dry forest, warm temperate rain forest and tropical seasonal forest. Southernmost South America is dominated by cool grass/shrubland, a single site retains cool temperate rain forest indicating that forest was present at some locations at the LGM. Some sites in Central Mexico and lowland Colombia remain unchanged in the biome assignments of warm mixed forest and tropical dry forest respectively, although the affinities that these sites have to different biomes do change between 18 000±1000 14 C yr BP and present. The "unresponsive" nature of these sites results from their location and the impact of local edaphic influence.

Climate of the Past↗