Community cloud computing infrastructure to support equitable water research and education
No abstract available.
Groundwater↗
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Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.
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Advancing global marine biogeography research with open-source GIS software and cloud-computing
Across many scientific domains, the ability to aggregate disparate datasets enables more meaningful global analyses. Within marine biology, the Census of Marine Life served as the catalyst for such a global data aggregation effort. Under the Census framework, the Ocean Biogeographic Information System was established to coordinate an unprecedented aggregation of global marine biogeography data. The OBIS data system now contains 31.3 million observations, freely accessible through a geospatial portal. The challenges of storing, querying, disseminating, and mapping a global data collection of this complexity and magnitude are significant. In the face of declining performance and expanding feature requests, a redevelopment of the OBIS data system was undertaken. Following an Open Source philosophy, the OBIS technology stack was rebuilt using PostgreSQL, PostGIS, GeoServer and OpenLayers. This approach has markedly improved the performance and online user experience while maintaining a standards-compliant and interoperable framework. Due to the distributed nature of the project and increasing needs for storage, scalability and deployment flexibility, the entire hardware and software stack was built on a Cloud Computing environment. The flexibility of the platform, combined with the power of the application stack, enabled rapid re-development of the OBIS infrastructure, and ensured complete standards-compliance.
Transactions in GIS↗
Full-range, solar-reflected hyperspectral microscopy to support earth remote sensing research
Over the past 20 years, hyperspectral microscopy has grown into a robust field of analysis for a number of applications. The visible to near-infrared (VNIR; 400 to 1000 nm) region of the spectrum has demonstrated utility for the characterization of healthy and diseased tissue and of biomolecular indicators at the cellular level. Here, we describe the development of a hyperspectral imaging (HSI) microscope that is aimed at material characterization to complement traditional stand-off, earth remote sensing with hyperspectral sensors. We combine commercial off the shelf technology to build an HSI microscope to collect spectral data with illumination provided by a tunable laser. Hyperspectral imaging microscopy (HIM) facilitates detailed examination of target materials at the subcentimeter spatial scale. The custom-built, laser illumination HSI microscope covers the NIR to shortwave infrared (NIR/SWIR; 900 to 2500 nm) solar-reflected spectral range. It is combined with a separate VNIR sensor (400 to 900 nm) that utilizes quartz–tungsten–halogen lamps for illumination. The combined sensors provide a means to collect <10,000 s of spectra in the full VNIR/SWIR spectral range from both pure substances and precisely engineered linear and nonlinear mixtures. The large abundance of spectra allows for a more detailed understanding of the variability and multivariate probability distributions of spectral signatures. This additional information aids in understanding the variability observed in ground truth spectra collected from portable spectrometers, and it greatly enhances sample description and metadata content. In addition, HIM data cubes can serve as proxies, as “microscenes,” for systems engineering applications such as trade studies for HSI acquired by air- and space-borne sensors.
Journal of Applied Remote Sensing↗
Geological exploration in an East Coast submarine canyon from a research submersible
Large talus blocks litter the flat floor of Oceanographer Canyon at a depth of 1460 meters; they indicate down-axis mass transport of floor sediment at an unknown time and rate. From 1460 to 1310 meters the sidewall is covered by unconsolidated sediment lying at 35° to 40° from the horizontal. An outcrop of Pleistocene or younger sediment at 1460 meters is probably a remnant of a former fill.
Science↗
Paleomagnetic record determined in cores from deep research wells in the Quaternary Santa Clara basin, California
Paleomagnetic study of cores from six deep wells provides an independent temporal framework for much of the alluvial stratigraphy of the Quaternary basin beneath the Santa Clara Valley. This stratigraphy consists of 8 upward-fining cycles in the upper 300 m of section and an underlying 150 m or more of largely fine-grained sediment. The eight cycles have been correlated with the marine oxygen isotope record, thus providing one means of dating the section. The section has also proved to contain a rich paleomagnetic record despite the intermittent sedimentation characteristic of alluvial environments. Each well was designed to reach a depth of ~300 m, although 2 were terminated at shallower depth where bedrock was encountered and one (GUAD) was deepened to bedrock at 407.2 m. Cores were taken at intermittent intervals in most of the wells, composing ~20%–25% of their depths. In GUAD an attempt was made to core the entire upper 300 m, with core recovery of 201.8 m (67%). The paleomagnetic framework ranges from the 32 ka Mono Lake excursion near the top of the second sedimentary cycle to below the 780 ka Brunhes-Matuyama geomagnetic reversal beneath the eighth cycle. These ages nicely fit those assigned to the section based on correlation with the marine oxygen isotope record. Several episodes of anomalous magnetic inclinations were also found within the cyclic section in some of the wells. Some of the episodes of anomalous magnetic inclinations are only separated by short normal intervals in a pattern similar to that described for some welldocumented excursions. We consider that a geomagnetic excursion was likely only if the anomalous inclinations were found at approximately the same stratigraphic position in more than one drill hole. A deeper time constraint is provided by the upper boundary (990 ka) of the Jaramillo Normal Polarity Subchron recognized at a depth of 302 m in one deeply penetrating well (GUAD). Approximately 100 m of normal Jaramillo section is evident below that in wells GUAD and EVGR. The reversal that we identify as the 780 ka Brunhes-Matuyama boundary, found at depths of 291–303 m in three wells, indicates an average rate of deposition in this upper section of ~37 cm/k.y. In GUAD, the top of the underlying normally polarized section, which we assign to the upper part of the Jaramillo Normal Polarity Subchron, was found between 301.8 and 304.5 m. The resultant 10 m of reversed polarity section above the Jaramillo seems anomalously short for this 210 k.y. part of the Matuyama Chron, during which several times that thickness of section probably should have accumulated. This observation indicates that a significant unconformity should be present in that short section between the Jaramillo Subchron and the Brunhes-Matuyama boundary. Deeper cores in two wells (GUAD and EVGR) all have normal polarity and seem to represent much of the Jaramillo Subchron, although no base for that subchron was found. The resultant minimum rate of sedimentation for this lower section beneath the unconformity is 170 cm/k.y. The Mono Lake (ca. 32 ka), Pringle Falls (ca. 210 ka), and Big Lost (ca. 565 ka) geomagnetic excursions all seem to be represented in the Santa Clara Valley wells. Possible correlations to the Laschamp (ca. 40 ka) and Blake (ca. 110 ka) excursions are also noted. Three additional excursions that have apparently not been previously reported from western North America occur within cycle 6 (between 536 and 433 ka), near the base of cycle 5 (after 433 ka), and near the middle of cycle 2 (before ca. 75 ka).
California↗
Geophysical framework of the continental United States: Progress, problems, and opportunities for research
Significant progress has been made over the past five decades in determining the geophysical framework of the continental United States. Highlights include detailed maps of gravity and aeromagnetic anomalies, heat flow, crustal thickness, seismicity, state of stress, and paleomagnetic pole positions. Important tectonic insights have come from earthquake studies, and from knowledge of lithospheric structure derived from seismic reflection, refraction/wide-angle reflection, surface-wave, and teleseismic data. Additional major advances in lithospheric geophysics will depend on four key factors: the reduction of uncertainties in the measurement and interpretation of geophysical data, the widespread application of coincident geophysical methods in concert with geological investigations, the collection of a more uniform continent-scale data base for all geophysical measurements, and the investigation of topical geophysical questions regarding the physical state and properties of the lithosphere. The impracticality of repeating most geophysical field measurements introduces poorly known, but likely large, uncertainties. Since most measurements are not repeated, high priority must be given to the reduction and quantification of uncertainties in measurements and interpretations. The most productive future investigations, in terms of resolution and minimum uncertainties in interpretation, will be those that apply different geophysical methods along identical profiles or areas, and that include geological investigations as a vital ingredient. Important gaps remain in our knowledge of the geophysical framework of the United States on a continent-wide scale, including the deep conductivity structure, the nature of the Moho discontinuity, the structure of the subcrustal lithosphere, and the depth of the lithosphere/asthenosphere boundary. Most transition zones separating geologic or physiographic provinces are poorly studied, yet these zones are likely to be the locations of the most profound changes in the physical properties of the lithosphere. Application of coincident geophysical techniques is needed to study these transition zones. Several topical geophysical questions warrant special emphasis in the future. These questions include the rheology of the crust and subcrustal lithosphere; the distribution, composition, and abundance of fluids in the crust; the genesis and evolution of the Moho; the origin of crustal conductivity zones and deep crustal reflections; the evidence for seismic anisotropy; and the short-term prediction of earthquakes.
GSA Memoirs↗
Estimation of directional surface wave spectra from a towed research catamaran
During the High-Resolution Remote Sensing Main Experiment (1993), wave height was estimated from a moving catamaran using pitch-rate and roll-rate sensors, a three-axis accelerometer, and a capacitive wave wire. The wave spectrum in the frequency band ranging roughly from 0.08 to 0.3 Hz was verified by independent buoy measurements. To estimate the directional frequency spectrum from a wave-wire array, the Data-Adaptive Spectral Estimator is extended to include the Doppler shifting effects of a moving platform. The method is applied to data obtained from a fixed platform during the Risø Air–Sea Experiment (1994) and to data obtained from a moving platform during the Coastal Ocean Processes Experiment (1995). Both results show that the propagation direction of the peak wind waves compares well with the measured wind direction. When swells and local wind waves are not aligned, the method can resolve the difference of propagation directions. Using the fixed platform data a numerical test is conducted that shows that the method is able to distinguish two wave systems propagating at the same frequency but in two different directions.
Journal of Atmospheric and Oceanic Technology↗
Design and performance of a horizontal mooring for upper-ocean research
This paper describes the design and performance of a two-dimensional moored array for sampling horizontal variability in the upper ocean. The mooring was deployed in Massachusetts Bay in a water depth of 84 m for the purpose of measuring the horizontal structure of internal waves. The mooring was instrumented with three acoustic current meters (ACMs) spaced along a 170-m horizontal cable that was stretched between two subsurface buoys 20 m below the sea surface. Five 25-m-long vertical instrument strings were suspended from the horizontal cable. A bottom-mounted acoustic Doppler current profiler (ADCP) was deployed nearby to measure the current velocity throughout the water column. Pressure sensors mounted on the subsurface buoys and the vertical instrument strings were used to measure the vertical displacements of the array in response to the currents. Measurements from the ACMs and the ADCP were used to construct time-dependent, two-dimensional current fields. The current fields were used as input to a numerical model that calculated the deformation of the array with respect to the nominal zero-current configuration. Comparison of the calculated vertical offsets of the downstream subsurface buoy and downstream vertical instrument string with the pressure measurements were used to verify the numerical code. These results were then used to estimate total deformation of the array due to the passage of the internal waves. Based on the analysis of the three internal wave events with the highest measured vertical offsets, it is concluded that the geometry of the main structure (horizontal cable and anchor legs) was kept to within ±2.0 m, and the geometry of the vertical instrument strings was kept to within ±4.0 m except for one instance when the current velocity reached 0.88 m s −1 .
Massachusetts↗
An introduction to current climate projections and their use in climate impacts research
Using climate projections to evaluate future climate impacts and their associated risks requires a background knowledge of the nature of climate change, use of climate models to develop future projections, and knowledge of how to address climate scenario uncertainty. This chapter provides an overview of climate and climate change, some of the foundational climate science that underlies current climate change assessments, and a brief introduction to climate models and climate scenario uncertainty. Global projections of temperature and precipitation changes from the recent Intergovernmental Panel on Climate Change (IPCC) Sixth Assessment Report (AR6) and a brief comparison to the prior assessment (AR5) are provided. The main sources of uncertainty in these projections include climate variability, climate model differences and treatment of scientific knowledge gaps, and greenhouse gas (GHG) emissions. When projections are downscaled to local resolution, downscaling is an additional source of uncertainty. These uncertainties can be incorporated in assessments of climate impacts by choosing a range of scenarios that directly address the sources of uncertainty. Evaluating the likelihood of a given climate impact on animal health or management strategies requires consideration of the main sources of climate projection uncertainties. Adaptation requires consideration of global-to-regional contexts of climate changes and impacts, but also adaptive capacity.
Book chapter↗
Response of western mountain ecosystems to climatic variability and change: A collaborative research approach
No abstract available.
Book chapter↗
Workgroup report: Drinking-water nitrate and health - Recent findings and research needs
Human alteration of the nitrogen cycle has resulted in steadily accumulating nitrate in our water resources. The U.S. maximum contaminant level and World Health Organization guidelines for nitrate in drinking water were promulgated to protect infants from developing methemoglobinemia, an acute condition. Some scientists have recently suggested that the regulatory limit for nitrate is overly conservative; however, they have not thoroughly considered chronic health outcomes. In August 2004, a symposium on drinking-water nitrate and health was held at the International Society for Environmental Epidemiology meeting to evaluate nitrate exposures and associated health effects in relation to the current regulatory limit. The contribution of drinking-water nitrate toward endogenous formation of N-nitroso compounds was evaluated with a focus toward identifying subpopulations with increased rates of nitrosation. Adverse health effects may be the result of a complex interaction of the amount of nitrate ingested, the concomitant ingestion of nitrosation cofactors and precursors, and specific medical conditions that increase nitrosation. Workshop participants concluded that more experimental studies are needed and that a particularly fruitful approach may be to conduct epidemiologic studies among susceptible subgroups with increased endogenous nitrosation. The few epidemiologic studies that have evaluated intake of nitrosation precursors and/or nitrosation inhibitors have observed elevated risks for colon cancer and neural tube defects associated with drinking-water nitrate concentrations below the regulatory limit. The role of drinking-water nitrate exposure as a risk factor for specific cancers, reproductive outcomes, and other chronic health effects must be studied more thoroughly before changes to the regulatory level for nitrate in drinking water can be considered.
Environmental Health Perspectives↗
Carbonate reservoir characterization and simulation: From facies to flow units: Report from the March 2004 Hedberg Research Symposium
[No abstract available]
American Association of Petroleum Geologists Bulle↗
Climate impacts to inland fishes: Shifting research topics over time
Climate change remains a primary threat to inland fishes and fisheries. Using topic modeling to examine trends and relationships across 36 years of scientific literature on documented and projected climate impacts to inland fish, we identify ten representative topics within this body of literature: assemblages, climate scenarios, distribution, climate drivers, population growth, invasive species, populations, phenology, physiology, and reproduction. These topics are largely similar to the output from artificial intelligence application (i.e., ChatGPT) search prompts, but with some key differences. The field of climate impacts on fish has seen dramatic growth since the mid-2000s with increasing popularity of topics related to drivers, assemblages, and phenology. The topics were generally well-dispersed with little overlap of common words, apart from phenology and reproduction which were closely clustered. Pairwise comparisons between topics revealed potential gaps in the literature including between reproduction and distribution and between physiology and phenology. A better understanding of these relationships can help capitalize on existing literature to inform conservation and sustainable management of inland fishes with a changing climate.
PLOS Climate↗
HRSC on Mars Express: Photogrammetric and cartographic research
The High Resolution Stereo Camera (HRSC) on the European spacecraft Mars Express is the first camera on a planetary mission especially designed for photogrammetric and cartographic purposes. Since January 2004 the camera has been taking image data from the Martian surface, characterized by high-resolution, stereo capability and color. These data provide an enormous potential for the generation of 3D surface models, color orthoimages, topographic and thematic maps, and additional products. The image data acquired undergo calibration and systematic processing to orthoimages and 3D data products. Within the international HRSC Science Team the members of the Photogrammetric/Cartographic Working Group are concerned with further refinements in order to achieve highest quality data products. These activities comprise improvements of the exterior orientation of the camera, various approaches to enhance DTM quality, and the generation of maps in the standard scale of 1:200 000 and larger scales as well. The paper reports on these activities and the results achieved so far .
Photogrammetric Engineering and Remote Sensing↗