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At least 73 records · Page 4Linked to original sources

USGS2020

Pallid sturgeon seasonal habitat selection in a large free-flowing river, the lower Mississippi River

Pallid sturgeon Scaphirhynchus albus (Forbes & Richardson, 1905, Bulletin of the Illinois State Laboratory of Natural History, 1905, 7, 37) are an endangered riverine sturgeon native to the Mississippi and Missouri rivers, and declining numbers have been attributed to multiple stressors, including habitat loss and alteration. The lower Mississippi River provides a useful context to assess pallid sturgeon habitat selection because, although altered for flood control and navigation, it provides a free-flowing system with a diversity of habitats and a minimally altered hydrograph. A discrete choice model of data collected year-round from two reaches for 3–5 years revealed changes in habitat selection across water temperatures and river stages representative of seasonal variation in habitat for 116 telemetry-tagged pallid sturgeon. Natural bank, island tip, and secondary channel were positively selected and main channel, although frequently used, was avoided. The degree of selection varied among river stages, water temperatures, and reaches. Habitat selection appears to be strongly influenced by preference for locations with moderate depth (median 11.7 m; lower and upper quartiles 8.1 m and 16.3 m) and moderate current velocity (median 0.9 m/s; lower and upper quartiles 0.7 m/s and 1.2 m/s).

Alabama, Arkansas, Louisiana, Mississippi↗

USGS1990

Physical factors and their influence on the mussel fauna of a main channel border habitat of the upper Mississippi River

The habitats of mussel species in a portion of the main stem of Navigation Pool 10 of the upper Mississippi River were examined. Population composition, abundance, and sediment and current preferences were measured at 186 sites in the East Channel of the pool. Although total mussel abundance varied significantly as a function of sediment and current (p ≤ 0.05), abundance could be predicted in only 44% of sites by discriminant analysis models. Accurate prediction of abundance for most species also was poor. Species showed little discrimination in choosing main channel habitats, but could be broadly classified into species preferring fine to medium-fine sands (e.g., Truncilla truncata and Potamilus alatus) or coarser sands (e.g., Lampsilis cardium and Truncilla donaciformis). The endangered Lampsilis higginsi was found in a broad range of habitats similar to those occupied by many of the more common species, suggesting factors other than loss of adult habitat for the rarity of this species.

Journal of the North American Benthological Societ↗

USGS2001

Factors controlling navigation-channel Shoaling in Laguna Madre, Texas

Shoaling in the Gulf Intracoastal Waterway of Laguna Madre, Tex., is caused primarily by recycling of dredged sediments. Sediment recycling, which is controlled by water depth and location with respect to the predominant wind-driven currents, is minimal where dredged material is placed on tidal flats that are either flooded infrequently or where the water is extremely shallow. In contrast, nearly all of the dredged material placed in open water >1.5 m deep is reworked and either transported back into the channel or dispersed into the surrounding lagoon. A sediment flux analysis incorporating geotechnical properties demonstrated that erosion and not postemplacement compaction caused most sediment losses from the placement areas. Comparing sediment properties in the placement areas and natural lagoon indicated that the remaining dredged material is mostly a residual of initial channel construction. Experimental containment designs (shallow subaqueous mound, submerged levee, and emergent levee) constructed in high-maintenance areas to reduce reworking did not retain large volumes of dredged material. The emergent levee provided the greatest retention potential approximately 2 years after construction.

Journal of Waterway, Port, Coastal and Ocean Engin↗

USGS2008

Mars Exploration Rover Navigation Camera in-flight calibration

The Navigation Camera (Navcam) instruments on the Mars Exploration Rover (MER) spacecraft provide support for both tactical operations as well as scientific observations where color information is not necessary: large-scale morphology, atmospheric monitoring including cloud observations and dust devil movies, and context imaging for both the thermal emission spectrometer and the in situ instruments on the Instrument Deployment Device. The Navcams are a panchromatic stereoscopic imaging system built using identical charge-coupled device (CCD) detectors and nearly identical electronics boards as the other cameras on the MER spacecraft. Previous calibration efforts were primarily focused on providing a detailed geometric calibration in line with the principal function of the Navcams, to provide data for the MER navigation team. This paper provides a detailed description of a new Navcam calibration pipeline developed to provide an absolute radiometric calibration that we estimate to have an absolute accuracy of 10% and a relative precision of 2.5%. Our calibration pipeline includes steps to model and remove the bias offset, the dark current charge that accumulates in both the active and readout regions of the CCD, and the shutter smear. It also corrects pixel-to-pixel responsivity variations using flat-field images, and converts from raw instrument-corrected digital number values per second to units of radiance (W m-2 nm-1 sr-1), or to radiance factor (I/F). We also describe here the initial results of two applications where radiance-calibrated Navcam data provide unique information for surface photometric and atmospheric aerosol studies. Copyright 2008 by the American Geophysical Union.

Journal of Geophysical Research E: Planets↗

USGS2007

Sedimentation in Lake Onalaska, navigation pool 7, Upper Mississippi River, since impoundment

Sediment accumulation was evaluated in Lake Onalaska, a 2800-ha backwater impoundment on the Upper Mississippi River. Computer programs were used to process bathometric charts and generate an extensive data set on water depth for the lake. Comparison of 1983 survey data with pre-impoundment (before 1937) data showed that Lake Onalaska had lost less than 10 percent of its original mean depth in the 46 years since impoundment. Previous estimates of sedimentation rates based on Cesium-137 sediment core analysis appear to have been too high.

Wisconsin↗

USGS2026

Role of volcano-tectonic interactions during early-phase magma-assisted continental rifting

We study volcanic-tectonic interactions during the early phase of rifting in the Natron Rift, a magmatic segment of the East African Rift System. We use the open-source crustal deformation modeling code, PyLith, to model deflation during the 2007–2008 explosive eruptions and inflation during 2016–2023. We compare predictions of surface displacements resulting from magma reservoir inflation from 3D models with and without topography and homogeneous and heterogeneous material properties against Global Navigation Satellite System displacements from 2016 to 2023. We prefer the model with heterogeneous material properties and topography for fitting the observed displacements. Including topography improves the fit to GNSS data and modulates stress changes from shallow magma sources. Our numerical modeling of Coulomb stress changes suggests that deflation of a magma reservoir under the active Ol Doinyo Lengai volcano could trigger oblique normal slip on the Natron Fault with Coulomb stress increases exceeding ∼0.1 MPa on the volcano-adjacent fault segment. Fault slip on the Natron Fault is less likely during inflation of the magma reservoir because normal compressive stress increases on the fault. We also demonstrate that Coulomb stress changes are sensitive to the inclusion of topography in our model, particularly because the depth of the magma reservoir is similar to the amplitude of the topographic relief.

Ol Doinyo Lenga↗

USGS2020

Characterization of pallid sturgeon (Scaphirhynchus albus) spawning habitat in the Lower Missouri River

Acipenseriformes (sturgeons and paddlefish) globally have declined throughout their range due to river fragmentation, habitat loss, overfishing, and degradation of water quality. In North America, pallid sturgeon (Scaphirhynchus albus) populations have experienced poor to no recruitment, or substantial levels of hybridization with the closely related shovelnose sturgeon (S. platorynchus). The Lower Missouri River is the only portion of the species’ range where successful reproduction and recruitment of genetically pure pallid sturgeon have been documented. This paper documents spawning habitat and behavior on the Lower Missouri River, which comprises over 1,300 km of unfragmented river habitat. The objective of this study was to determine spawning locations and describe habitat characteristics and environmental conditions (depth, water velocity, substrate, discharge, temperature, and turbidity) on the Lower Missouri River. We measured habitat characteristics for spawning events of ten telemetry‐tagged female pallid sturgeon from 2008–2013 that occurred in discrete reaches distributed over hundreds of kilometers. These results show pallid sturgeon select deep and fast areas in or near the navigation channel along outside revetted banks for spawning. These habitats are deeper and faster than nearby river habitats within the surrounding river reach. Spawning patches have a mean depth of 6.6 m and a mean depth‐averaged water‐column velocity of 1.4 m per second. Substrates in spawning patches consist of coarse bank revetment, gravel, sand, and bedrock. Results indicate habitat used by pallid sturgeon for spawning is more common and widespread in the present‐day channelized Lower Missouri River relative to the sparse and disperse coarse substrates available prior to channelization. Understanding the spawning habitats currently utilized on the Lower Missouri River and if they are functioning properly is important for improving habitat remediation measures aimed at increasing reproductive success. Recovery efforts for pallid sturgeon on the Missouri River, if successful, can provide guidance to sturgeon recovery on other river systems; particularly large, regulated, and channelized rivers.

Missouri, Nebraska, Wyoming, Montana, North Dakota↗

USGS2020

Automated location correction and spot height generation for named summits in the coterminous United States

Spot elevations published on historical U.S. Geological Survey topographic maps were established as needed to enhance information imparted by the quadrangle’s contours. In addition to other features, labels were routinely placed on mountain summits. While some elevations were established through field survey triangulation, many were computed during photogrammetric stereo-compilation. Today, Global Navigation Satellite System (GNSS) receivers have replaced expensive triangulation methods. However, since GNSS measurements require visiting the feature location, a national dataset containing high-accuracy spot elevations has not yet been created. Consequently, modern U.S. Topo maps are devoid of mountain peak or other spot elevations. Still, topographic map users continue to demand the display of spot heights. Therefore, a pilot study was conducted to evaluate the feasibility of automatically generating elevation values at named U.S. summits using available elevation data. The devised method uses an uphill stepping technique to find the most likely highest point in subsequently higher-resolution elevation models. Resulting elevation values are compared to other published sources. Results from 196 summits indicate that values derived from lidar are generally higher, whereas those populated from the one-third arc-second USGS Seamless 3DEP elevation dataset are generally lower. A thorough understanding of these relationships require the evaluation of more points.

International Journal of Digital Earth↗

USGS2018

Influence of baffles on upstream passage of brook trout and brown trout in an experimental box culvert

There is much to learn about improving baffle designs to increase successful fish passage through culverts. A fish’s motivation to attempt entry into the culvert is essential. Upon entry, successful passage will largely depend on the physiological ability of the fish to navigate the entire culvert length. In this study, the motivation of brook trout ( Salvelinus fontinalis (Mitchill, 1814)) and brown trout ( Salmo trutta Linnaeus, 1758) to attempt ascent of an experimental flume, which mimics a roadway culvert left bare (smooth) or fitted with either spoiler or weir baffles, is assessed. Performance, measured as maximum distance of ascent within the flume, is also quantified. The bare flume was the most motivating for brook trout, and the weirs were most motivating for brown trout. As a rule, brown trout showed less motivation to stage attempts than brook trout, except within the weir baffle treatments. Performance was greatest in the weirs for smaller trout and in the spoiler baffles for larger trout. Our findings suggest that baffle form influences passage rates at road crossings in ways previously unknown and further stresses the importance of considering fish motivation and performance together when assessing the efficacy of baffle forms.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2007

Quantifying fluid and bed dynamics for characterizing benthic physical habitat in large rivers

Sturgeon use benthic habitats in and adjacent to main channels where environmental conditions can include bedload sediment transport and high near-bed flow velocities. Bed velocity measurements obtained with acoustic Doppler instruments provide a means to assess the concentration and velocity of sediment moving near the streambed, and are thus indicative of the bedload sediment transport rate, the near-bed flow velocity, and the stability of the substrate. Acoustic assessments of benthic conditions in the Missouri River were conducted at scales ranging from the stream reach to individual bedforms. Reach-scale results show that spatially-averaged bed velocities in excess of 0.5 m s-1 frequently occur in the navigation channel. At the local scale, bed velocities are highest near bedform crests, and lowest in the troughs. Low-velocity zones can persist in areas with extremely high mean bed velocities. Use of these low-velocity zones may allow sturgeon to make use of portions of the channel where the average conditions near the bed are severe. To obtain bed velocity measurements of the highest possible quality, it is necessary to extract bottom-track and GPS velocity information from the raw ADCP data files on a ping-by-ping basis. However, bed velocity measured from a point can also be estimated using a simplified method that is more easily implemented in the context of routine monitoring. The method requires only the transect distance and direction data displayed in standard ADCP data-logging software. Bed velocity estimates obtained using this method are usually within 5-10% of estimates obtained from ping-by-ping processing. ?? 2007 Blackwell Verlag.

Journal of Applied Ichthyology↗

USGS2020

A red knot as a black swan: How a single bird shows navigational abilities during repeat crossings of the Greenland Icecap

Despite the wealth of studies on seasonal movements of birds between southern nonbreeding locations and High Arctic breeding locations, the key mechanisms of navigation during these migrations remain elusive. A flight along the shortest possible route between pairs of points on a sphere (‘orthodrome’) requires a bird to be able to assess its current location in relation to its migration goal and to make continuous adjustment of heading to reach that goal. Alternatively, birds may navigate along a vector with a fixed orientation (‘loxodrome’) based on magnetic and/or celestial compass mechanisms. Compass navigation is considered especially challenging for summer migrations in Polar regions, as continuous daylight and complexity in the geomagnetic field may complicate the use of both celestial and magnetic compasses here. We examine the possible use of orientation mechanisms during migratory flights across the Greenland Icecap. Using a novel 2 g solar-powered satellite transmitter, we documented the flight paths travelled by a female red knot ( Calidris canutus islandica ) during two northward and two southward migrations. The geometry of the paths suggests that red knots can migrate across the Greenland Icecap along the shortest-, orthodrome-like, path instead of the previously suggested loxodrome path. This particular bird’s ability to return to locations visited in a previous year, together with its sudden course changes (which would be appropriate responses to ambient wind fields), suggest a map sense that enables red knots to determine location, so that they can tailor their route depending on local conditions.

Journal of Avian Biology↗

USGS1989

Body weight and composition dynamics of fall migrating canvasbacks

We studied body weights and composition of canvasbacks (Aythya valisineria) during fall migration 1975-77 on stopover sites along the upper Mississippi River near La Crosse, Wisconsin (Navigational Pools 7 and 8) and Keokuk, Iowa (Navigational Pool 19). Body weights varied (P < 0.001) by age and sex without interaction. Weights varied by year (P < 0.001) on Pools 7 and 8. Mean weights increased (P < 0.01) within age and sex classes by date and averaged 3.6 and 2.7 g daily on Pools 7 and 8 and Pool 19, respectively. Percent fat was highly correlated (P < 0.001) with carcass weight for each age and sex. Live weight was a good predictor of total body fat. Mean estimated total body fat ranged from 200 to 300 g and comprised 15-20% of live weights among age and sex classes. Temporal weight patterns were less variable for adults than immatures, but generally increased during migration. Length of stopover varied inversely with fat reserves among color-marked adult males. Variation in fat condition of canvasbacks during fall may explain the mechanism regulating population ingress and egress on stopover sites. Fat reserves attained by canvasbacks during fall stopover may have adaptive significance in improving survival by conditioning for winter.

Journal of Wildlife Management↗

USGS2006

Seasonal effects of the zebra mussel ( Dreissena polymorpha ) on sediment denitrification rates in Pool 8 of the Upper Mississippi River

Zebra mussels ( Dreissena polymorpha ) have altered the structure of invaded ecosystems and exhibit characteristics that suggest they may influence ecosystem processes such as nitrogen (N) cycling. We measured denitrification rates seasonally on sediments underlying zebra mussel beds collected from the impounded zone of Navigation Pool 8 of the Upper Mississippi River. Denitrification assays were amended with nutrients to characterize variation in nutrient limitation of denitrification in the presence or absence of zebra mussels. Denitrification rates at zebra mussel sites were high relative to sites without zebra mussels in February 2004 (repeated measures analysis of variance (RM ANOVA), p = 0.005), potentially because of high NO 3 -N variability from nitrification of high NH 4 + zebra mussel waste. Denitrification rates were highest in June 2003 (RM ANOVA, p < 0.001), corresponding with the highest NO 3 -N concentrations during the study (linear regression, R 2 = 0.72, p < 0.001). Denitrification was always N-limited, but sites without zebra mussels showed the strongest response to N amendments relative to sites with zebra mussels (two-way ANOVA, p ≤ 0.01). Examining how zebra mussels influence denitrification rates will aid in developing a more complete understanding of the impact of zebra mussels and more effective management strategies of eutrophic waters.

Upper Mississippi River↗

USGS1995

The distribution of Vallisneria americana seeds and seedling light requirements in the Upper Mississippi River

Vallisneria americana declined in backwaters of the Upper Mississippi River, U.S.A., after a drought in 1988. To determine whether viable seeds of V . americana occurred in the seed bank of navigation pool 7, Lake Onalaska, the upper 5 cm of sediment was collected from 103 sites in May 1990. These sediment samples were kept in pots at a depth of 0.4, 0.8, and 1.2 m in an outdoor pond for 12 weeks. Vallisneria americana seeds germinated from sites throughout the lake, and some seedlings produced overwintering buds by the end of the study. Seeds, spores, or fragments of 12 other species of aquatic plants also germinated. Seed germination trials with fresh and stored seeds in both greenhouse and ponds in which light availability was reduced with shade cloths indicated that seed germination was insensitive to light level. To determine the light requirements for seedling survival and bud production, sediment from Lake Onalaska was incubated in ponds under neutral density shade screens reducing light to 2, 5, 9, and 25% of full sun. Seeds germinated under all shade treatments but survival was significantly higher in the 9 and 25% light treatments, and bud production was restricted to these light levels.

Minnesota, Wisconsin↗

USGS2021

Before the first meal: The elusive pre-feeding juvenile stage of the sea lamprey

Although sea lamprey ( Petromyzon marinus ) in the Laurentian Great Lakes have been studied intensively for more than 70 years, many questions remain about their complex life cycle. One of the least understood portions is the post-metamorphic stage (hereafter pre-feeding juvenile, PFJ) that occurs prior to parasitic feeding. PFJ must emerge from stream sediments and migrate downstream into nearshore feeding areas. Key uncertainties include the internal and exogenous triggers that regulate the timing and duration of the migration, and the mechanisms the animal uses to navigate, avoid predators, and locate their first host. However, many of these factors may vary predictably among natal streams in response to stable geomorphological and hydraulic characteristics that regulate the timing of movements (e.g., flood phenology), energetic costs (e.g., stream length), and risk (e.g., predator density). An improved understanding of the PFJ stage presents two opportunities to improve the success of sea lamprey control: (1) identification of streams where natural mortality during the PFJ stage is high, allowing for the reallocation of larval control to streams more likely to produce successful parasites, and (2) removal or killing of PFJs in streams where natural mortality is low. Either approach represents an opportunity to limit parasitic damage to valuable fish stocks. Here, we review the state of knowledge of the PFJ stage and identify critical knowledge gaps that, if addressed, could facilitate sea lamprey assessment and control by exploiting the behavior of PFJ as they outmigrate from streams in search of their first meal.

Journal of Great Lakes Research↗

USGS2021

Incorporating water quality analysis into navigation assessments as demonstrated in the Mississippi River Basin

A description of historical and ambient water quality conditions is often required as part of navigational studies. This paper describes a series of tools developed by the USGS that can aid navigation managers in developing water quality assessments. The tools use R, a statistical software program, and provide methods to retrieve historical streamflow and water quality data, summarize observations, model concentrations and fluxes, and estimate seasonal, annual, and decadal trends. The utility of these tools is demonstrated by providing an analysis of the seasonal variability and long-term trends of nitrate plus nitrite, orthophosphate, and suspended sediment concentrations and fluxes at nine sites in the Mississippi River Basin. Trends in annual mean concentration and flux showed fairly stable nitrate plus nitrite at most of the nine sites, with increases in the Upper Mississippi and Missouri Rivers and decreases on the Illinois River over a 40-year period beginning in 1980. Orthophosphate concentration or flux increased at almost all sites over a similar time period. Conversely, a concurrent steady decline in suspended sediment concentrations and fluxes was noted at sites throughout the basin.

Mississippi River Basin↗

USGS1982

Dynamic ice-wallow relief of northern Alaska's nearshore

Contour maps with 0.5-m depth interval were prepared for a small area seaward of Reindeer Island, a barrier island in the Beaufort Sea, Alaska, by repeated surveys with very accurate navigation and very close trackline spacing. The maps reveal numerous closed depressions and mounds about 50 to 100 m in diameter and 2 to 3 m in relief, presumably related to grounded ice floes common in the area year round. Some of the features were obliterated over the course of three seasons while new ones formed. Although the depressions resemble kettles, they are formed by very different mechanisms. We believe that these bedforms represent erosion and deposition caused by: a) intensified flow around stationary ice floes serving as obstacles and b) pulsating currents generated by vertical oscillations or rocking motions of grounded floes in a seaway. Because sediment transport occurs around the ice, not where it directly touches the sea floor, the depressions are much larger than the base of the acting floes. Ice-wallow bedforms, although not found everywhere, are characteristic of arctic nearshore regions with non-cohesive sediments, and most likely occur in other ice-stressed coastal environments in differing degrees. The bedforms studied here are highly active and must be considered in planning nearshore construction activities.

Journal of Sedimentary Petrology↗

USGS2022

Categorizing active marine acoustic sources based on their potential to affect marine animals

Marine acoustic sources are widely used for geophysical imaging, oceanographic sensing, and communicating with and tracking objects or robotic vehicles in the water column. Under the U.S. Marine Mammal Protection Act and similar regulations in several other countries, the impact of controlled acoustic sources is assessed based on whether the sound levels received by marine mammals meet the criteria for harassment that causes certain behavioral responses. This study describes quantitative factors beyond received sound levels that could be used to assess how marine species are affected by many commonly deployed marine acoustic sources, including airguns, high-resolution geophysical sources (e.g., multibeam echosounders, sidescan sonars, subbottom profilers, boomers, and sparkers), oceanographic instrumentation (e.g., acoustic doppler current profilers, split-beam fisheries sonars), and communication/tracking sources (e.g., acoustic releases and locators, navigational transponders). Using physical criteria about the sources, such as source level, transmission frequency, directionality, beamwidth, and pulse repetition rate, we divide marine acoustic sources into four tiers that could inform regulatory evaluation. Tier 1 refers to high-energy airgun surveys with a total volume larger than 1500 in 3 (24.5 L) or arrays with more than 12 airguns, while Tier 2 covers the remaining low/intermediate energy airgun surveys. Tier 4 includes most high-resolution geophysical, oceanographic, and communication/tracking sources, which are considered unlikely to result in incidental take of marine mammals and therefore termed de minimis . Tier 3 covers most non-airgun seismic sources, which either have characteristics that do not meet the de minimis category (e.g., some sparkers) or could not be fully evaluated here (e.g., bubble guns, some boomers). We also consider the simultaneous use of multiple acoustic sources, discuss marine mammal field observations that are consistent with the de minimis designation for some acoustic sources, and suggest how to evaluate acoustic sources that are not explicitly considered here.

Journal of Marine Science and Engineering↗