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Combining citizen science species distribution models and stable isotopes reveals migratory connectivity in the secretive Virginia rail

Stable hydrogen isotope (δD) methods for tracking animal movement are widely used yet often produce low resolution assignments. Incorporating prior knowledge of abundance, distribution or movement patterns can ameliorate this limitation, but data are lacking for most species. We demonstrate how observations reported by citizen scientists can be used to develop robust estimates of species distributions and to constrain δD assignments. We developed a Bayesian framework to refine isotopic estimates of migrant animal origins conditional on species distribution models constructed from citizen scientist observations. To illustrate this approach, we analysed the migratory connectivity of the Virginia rail Rallus limicola , a secretive and declining migratory game bird in North America. Citizen science observations enabled both estimation of sampling bias and construction of bias-corrected species distribution models. Conditioning δD assignments on these species distribution models yielded comparably high-resolution assignments. Most Virginia rails wintering across five Gulf Coast sites spent the previous summer near the Great Lakes, although a considerable minority originated from the Chesapeake Bay watershed or Prairie Pothole region of North Dakota. Conversely, the majority of migrating Virginia rails from a site in the Great Lakes most likely spent the previous winter on the Gulf Coast between Texas and Louisiana. Synthesis and applications . In this analysis, Virginia rail migratory connectivity does not fully correspond to the administrative flyways used to manage migratory birds. This example demonstrates that with the increasing availability of citizen science data to create species distribution models, our framework can produce high-resolution estimates of migratory connectivity for many animals, including cryptic species. Empirical evidence of links between seasonal habitats will help enable effective habitat management, hunting quotas and population monitoring and also highlight critical knowledge gaps.

Journal of Applied Ecology↗

Landsat Data

In the mid-1960's, the National Aeronautics and Space Administration (NASA) embarked on an initiative to develop and launch the first Earth monitoring satellite to meet the needs of resource managers and earth scientists. The U.S. Geological Survey (USGS) entered into a partnership with NASA in the early 1970?s to assume responsibility for archiving data and distributing data products. On July 23, 1972, NASA launched the first in a series of satellites designed to provide repetitive global coverage of the Earth?s land masses. Designated initially as the "Earth Resources Technology Satellite-A" ("ERTS-A"), it used a Nimbus-type platform that was modified to carry sensor systems and data relay equipment. When operational orbit was achieved, it was designated "ERTS-1." The satellite continued to function beyond its designed life expectancy of 1 year and finally ceased to operate on January 6, 1978, more than 5 years after its launch date. The second in this series of Earth resources satellites (designated ?ERTS-B?) was launched January 22, 1975. It was renamed "Landsat 2" by NASA, which also renamed "ERTS-1" as "Landsat 1." Three additional Landsats were launched in 1978, 1982, and 1984 (Landsats 3, 4, and 5 ). (See table 1). NASA was responsible for operating the program through the early 1980?s. In January 1983, operation of the Landsat system was transferred to the National Oceanic and Atmospheric Administration (NOAA). In October 1985, the Landsat system was commercialized and the Earth Observation Satellite Company, now Space Imaging EOSAT, assumed responsibility for its operation under contract to NOAA. Throughout these changes, the USGS EROS Data Center (EDC) retained primary responsibility as the Government archive of Landsat data. The Land Remote Sensing Policy Act of 1992 (Public Law 102-5555) officially authorized the National Satellite Land Remote Sensing Data Archive and assigned responsibility to the Department of the Interior. In addition to its Landsat data management responsibility, the EDC investigates new methods of characterizing and studying changes on the land surface with Landsat data.

Fact Sheet↗

Coastal change during Hurricane Ivan 2004

Category 3 Hurricane Ivan came ashore near Gulf Shores, Alabama, on September 16, 2004. The barrier islands of the northern Gulf of Mexico near the Florida/Alabama border were exposed to the strongest winds. The communities of Gulf Shores, Pine Island and Orange Beach, AL, are, in places, very low lying with their dunes rising up only several meters. These dunes were unable to contain the 3-4 meter storm surge. The U.S. Geological Survey (USGS), National Aeronautics and Space Administration (NASA), and U.S. Army Corps of Engineers (USACE) are cooperating in a research project investigating coastal change during Hurricane Ivan. On Friday September 17, 2004, the USGS acquired oblique aerial photography to help understand the impact of Ivan on the coastal environment. Two days later, airborne lidar was collected using NASA Experimental Advanced Airborne Research Lidar (EAARL). Gulf waters, driven by hurricane force winds spilled across the barrier islands creating currents strong enough to transport massive amounts of sand landward. These waters undermined buildings and roads and opened new island breaches. On top of the surge, breaking waves nearly as tall as the depth of the surge, eroded dunes and battered structures.

Alabama↗

Communicating Leave No Trace ethics and practices: Efficacy of two-day trainer courses

Heavy recreational visitation within protected natural areas has resulted in many ecological impacts. Many of these impacts may be avoided or minimized through adoption of low-impact hiking and camping practices. Although ?No Trace? messages have been promoted in public lands since the 1970s, few studies have documented the reception and effectiveness of these messages. The U.S. Leave No Trace Center for Outdoor Ethics develops and promotes two-day Trainer courses that teach Leave No Trace (LNT) skills and ethics to outdoor professionals, groups, and interested individuals. This study examined the change in knowledge, ethics, and behavior of LNT Trainer course participants. The respondents were a convenience sample of participants in Trainer courses offered from April through August 2003. Trainer course instructors administered pre-course and post-course questionnaires to their participants, and we contacted participants individually with a followup questionnaire 4 months after completion of their course. Scores for each of the sections increased immediately following the course, and decreased slightly over the 4 months following the course. Overall, more than half of the knowledge and behavior items, and half of the ethics items, showed significant improvement from pre-course measures to the follow-up. Age, reported LNT experience, and backpacking experience affected the participants? pre-course knowledge and behavior scores. Younger, less experienced respondents also showed a greater improvement in behavior following the course. Trainer course participants also shared their LNT skills and ethics with others both formally and informally. In summary, the LNT Trainer course was successful in increasing participants? knowledge, ethics, and behavior, which they then shared with others. Since many low impact skills taught in the LNT curriculum are supported by scientific research, LNT educational programs have the potential to effectively minimize the environmental impacts caused by outdoor recreationists. Research implications for improving LNT training and instruction are described.

Journal of Park and Recreation Administration↗

Occurrence of antibiotics in water from fish hatcheries

The recent discovery of pharmaceuticals in streams across the United States (Kolpin and others, 2002) has raised the visibility and need for monitoring of antibiotics in the environment. Possible sources of antibiotics and other pharmaceuticals in streams may include fish hatcheries. This fact sheet presents the results from a preliminary study of fish hatcheries across the United States for the occurrence and concentration of antibiotics present in fish hatchery water. The study examines both sufonamides and tetracyclines. Sulfonamides are synthetic compounds, and tetracyclines are naturally occurring compounds. The use of antibiotics added to specially formulated feed is a common practice in fish hatcheries to treat and prevent bacterial infections in large fish populations. U.S. Food and Drug Administration (FDA) approved antibiotics are oxytetracycline-HCI, sulfamerazine, and a combination drug containing ormetoprim and sulfadiamethoxine (U.S. Food and Drug Administration, 2003). During January 2001–June 2002, the U.S. Geological Survey (USGS) Organic Geochemistry Research Laboratory (OGRL), Lawrence, Kansas, cooperatively collected water samples from 13 fish hatcheries across the United States (fig. 1) with the assistance of hatchery operators. A method for the analysis of antibiotics was developed and used to identify and quantify these compounds in fish hatchery water (Lindsey and others, 2001). This study was completed to determine if trace levels of antibiotics [approximately 1 microgram per liter (μg/L) or 1 part per billion or greater occurred] in which water associated with fish hatcheries, which are a potential source of these compounds in surface water.

Colorado, Iowa, Kansas, New York, Oklahoma, Oregon↗

Geology and mineral and energy resources, Roswell Resource Area, New Mexico; an interactive computer presentation

This Compact Disc-Read Only Memory (CD-ROM) contains a program illustrating the geology and mineral and energy resources of the Roswell Resource Area, an administrative unit of the U.S. Bureau of Land Management in east-central New Mexico. The program enables the user to access information on the geology, geochemistry, geophysics, mining history, metallic and industrial mineral commodities, hydrocarbons, and assessments of the area. The program was created with the display software, SuperCard, version 1.5, by Aldus. The program will run only on a Macintosh personal computer. This CD-ROM was produced in accordance with Macintosh HFS standards. The program was developed on a Macintosh II-series computer with system 7.0.1. The program is a compiled, executable form that is nonproprietary and does not require the presence of the SuperCard software.

New Mexico↗

Tools for beach health data management, data processing, and predictive model implementation

This fact sheet describes utilities created for management of recreational waters to provide efficient data management, data aggregation, and predictive modeling as well as a prototype geographic information system (GIS)-based tool for data visualization and summary. All of these utilities were developed to assist beach managers in making decisions to protect public health. The Environmental Data Discovery and Transformation (EnDDaT) Web service identifies, compiles, and sorts environmental data from a variety of sources that help to define climatic, hydrologic, and hydrodynamic characteristics including multiple data sources within the U.S. Geological Survey and the National Oceanic and Atmospheric Administration. The Great Lakes Beach Health Database (GLBH-DB) and Web application was designed to provide a flexible input, export, and storage platform for beach water quality and sanitary survey monitoring data to compliment beach monitoring programs within the Great Lakes. A real-time predictive modeling strategy was implemented by combining the capabilities of EnDDaT and the GLBH-DB for timely, automated prediction of beach water quality. The GIS-based tool was developed to map beaches based on their physical and biological characteristics, which was shared with multiple partners to provide concepts and information for future Web-accessible beach data outlets.

Fact Sheet↗

Processes influencing the transport and fate of contaminated sediments in the coastal ocean– Boston Harbor and Massachusetts Bay

Most of the major urban centers of the United States including Boston, New York, Washington, Chicago, New Orleans, Miami, Los Angeles, San Francisco, and Seattle—are on a coast (fig. 1.1). All of these cities discharge treated sewage effluent into adjacent waters. In 2000, 74 percent of the U.S. population lived within 200 kilometers (km) of the coast. Between 1980 and 2002, the population density in coastal communities increased approximately 4.5 times faster than in noncoastal areas of the U.S. (Perkins, 2004). More people generate larger volumes of wastes, increase the demands on wastewater treatment, expand the area of impervious land surfaces, and use more vehicles that contribute contaminants to street runoff. According to the National Coastal Condition Report II (U.S. Environmental Protection Agency, 2005a), on the basis of coastal habitat, water and sediment quality, benthic index, and fish tissue, the overall national coastal condition is only poor to fair and the overall coastal condition in the highly populated Northeast is poor. Scientific information helps managers to prioritize and regulate coastal-ocean uses that include recreation, commercial fishing, transportation, waste disposal, and critical habitat for marine organisms. These uses are often in conflict with each other and with environmental concerns. Developing a strategy for managing competing uses while maintaining sustainability of coastal resources requires scientific understanding of how the coastal ocean system behaves and how it responds to anthropogenic influences. This report provides a summary of a multidisciplinary research program designed to improve our understanding of the transport and fate of contaminants in Massachusetts coastal waters. Massachusetts Bay and Boston Harbor have been a focus of U.S. Geological Survey (USGS) research because they provide a diverse geographic setting for developing a scientific understanding of the geology, geochemistry, and oceanography of coastal systems in general. Scientific data from this region can also be used to inform decisions about important economic, environmental, and political issues. From the economic viewpoint, the annual value of tourism and shipping in Massachusetts and Cape Cod Bays is about $1.5 billion and $1.9 billion, respectively. Commercial and recreational fishing generates about $240 million per year in the same region (U.S. Environmental Protection Agency, 2005b). The environmental issue is the 300-year history of waste discharge from the Boston metropolitan area into the harbor. This history is punctuated by cycles of environmental degradation, public outcry, and improvements in the sewage treatment system. With each improvement, however, the continuous growth of population in greater Boston (fig. 1.2) and the resulting increase in the volume of waste exceeded the capacity of the treatment system, thereby setting the stage for a new contamination crisis. By the 1980s, the levels of contaminants in sediments of Boston Harbor were among the highest in the nation (National Oceanic and Atmospheric Administration, 1987). Fish were diseased, shellfish beds were closed, and swimming beaches were unsafe after heavy rains; in general, water quality and aesthetics were below acceptable standards. Legal and political issues have always been part of Boston Harbor’s history. The environmental conditions in the 1980s were highlighted in a 1983 legal suit brought by the city of Quincy against the Metropolitan District Commission (MDC, the state agency responsible for sewage treatment) and heads of three state agencies for discharging untreated or poorly treated sewage into the harbor (Dolin, 2004). The suit never went to trial, but through the actions of a Massachusetts Superior Court, the issue of Boston Harbor contamination remained on the political and public agenda. The judge called the harbor “unsafe, unsanitary, indecent, in violation of the law (Clean Water Act), and a danger to the health and welfare of the people” (Forman, 1984). To force the state legislature to implement a plan to improve harbor conditions, the judge threatened to place the MDC in receivership and curtail new sewage hookups for industry. Under intense lobbying by business, the legislature created the Massachusetts Water Resources Authority (MWRA) in December 1984. The independent MWRA was established to manage Boston’s waste treatment system and was given the authority to float bonds to pay for major improvements in the treatment system. In 1985, a Federal court began hearings on a suit brought by the Conservation Law Foundation, the Environmental Protection Agency (USEPA), and towns of Quincy and Winthrop against the MDC and MWRA (as heir to responsibilities of the MDC) for years of violation of the Clean Water Act. The judge ruled against the defendants and required all the parties to submit a construction plan and schedule for a new sewage treatment system. From these submissions, he developed a schedule for treatment system upgrades that would give the “citizens of this commonwealth a public assurance that Boston Harbor will be cleaned up within a defined period of time” (Dolin, 2004). The MWRA’s Boston Harbor cleanup program (Levy and Connor, 1992) has transformed the Boston sewage system. Key improvements were to (1) reduce contaminants at the industrial source; (2) remediate leaks in the sewage-collection system; (3) eliminate sewage sludge discharge to the harbor; (4) upgrade sewage treatment from primary to secondary; (5) construct a new ocean outfall 15.2 km offshore in Massachusetts Bay for discharge of treated effluent (fig. 1.3); and (6) implement improvements in the combined-sewer-overflow system. As part of the harbor cleanup program, the MWRA developed a comprehensive monitoring program (summarized in MWRA, 2004) to assess changes in the harbor and bays that specifically related to the new sewage system. Additional information about conditions and processes in the coastal system on a regional scale and over a long time period was and continues to be important in predicting and interpreting local change. Implementation of the MWRA’s program and the mission of the USGS to understand the geology of the nation’s offshore waters provided an opportunity to conduct a cooperative multidisciplinary research program. This USGS program addresses basic scientific questions as well as concerns raised by management regarding the design, implementation, and assessment of the new sewage treatment system. Already active in Boston Harbor during the late 1970s, the USGS expanded research into Massachusetts Bay with a multidisciplinary program in 1989.

Massachusetts↗

The Land Processes Distributed Active Archive Center (LP DAAC)

The Land Processes Distributed Active Archive Center (LP DAAC) operates as a partnership with the U.S. Geological Survey and is 1 of 12 DAACs within the National Aeronautics and Space Administration (NASA) Earth Observing System Data and Information System (EOSDIS). The LP DAAC ingests, archives, processes, and distributes NASA Earth science remote sensing data. These data are provided to the public at no charge. Data distributed by the LP DAAC provide information about Earth’s surface from daily to yearly intervals and at 15 to 5,600 meter spatial resolution. Data provided by the LP DAAC can be used to study changes in agriculture, vegetation, ecosystems, elevation, and much more. The LP DAAC provides several ways to access, process, and interact with these data. In addition, the LP DAAC is actively archiving new datasets to provide users with a variety of data to study the Earth.

Fact Sheet↗

Geologic interpretation and multibeam bathymetry of the sea floor in southeastern Long Island Sound

Digital terrain models (DTMs) produced from multibeam echosounder (MBES) bathymetric data provide valuable base maps for marine geological interpretations (e.g. Todd and others, 1999; Mosher and Thomson, 2002; ten Brink and others, 2004; Poppe and others, 2006a,b). These maps help define the geological variability of the sea floor (one of the primary controls of benthic habitat diversity); improve our understanding of the processes that control the distribution and transport of bottom sediments, the distribution of benthic habitats and associated infaunal community structures; and provide a detailed framework for future research, monitoring, and management activities. The bathymetric survey interpreted herein (National Oceanic and Atmospheric Administration (NOAA) survey H11255) covers roughly 95 km? of sea floor in southeastern Long Island Sound (fig. 1). This bathymetry has been examined in relation to seismic reflection data collected concurrently, as well as archived seismic profiles acquired as part of a long-standing geologic mapping partnership between the State of Connecticut and the U.S. Geological Survey (USGS). The objective of this work was to use these geophysical data sets to interpret geomorphological attributes of the sea floor in terms of the Quaternary geologic history and modern sedimentary processes within Long Island Sound.

Open-File Report↗

Sea floor topography and backscatter intensity of the Hudson Canyon region offshore of New York and New Jersey

These maps show the sea floor topography and backscatter intensity of the Hudson Canyon region on the continental slope and rise offshore of New Jersey and New York (fig. 1 and fig. 2). Sheet 1 shows sea floor topography as shaded relief. Sheet 2 shows sea floor topography as shaded relief with backscatter intensity superimposed in color. Both sheets are at a scale of 1:300,000 and also show smoothed topographic contours at selected intervals. The maps are based on new multibeam echo-sounder data collected on an 18-day cruise carried out aboard the National Oceanic and Atmospheric Administration (NOAA) Ship Ronald H. Brown during August and September 2002. Additional multibeam data of the Hudson Canyon collected by the Woods Hole Oceanographic Institution (WHOI), on the continental shelf collected by the STRATAFORM project (Goff and others, 1999), and a survey of the Hudson Shelf Valley (Butman and others, 2003), and a compilation of bathymetric data from the National Geophysical Data Center (NGDC) Coastal Relief Model provide coverage of areas surrounding Hudson Canyon (fig. 2). Interpretations of the surficial geology also utilize widely spaced 3.5- and 10-kiloHertz (kHz) high-resolution seismic profiles collected by the U.S. Geological Survey (fig.2).

New Jersey, New York↗

Magmatic carbon dioxide emissions at Mammoth Mountain, California

Carbon dioxide (CO 2 ) of magmatic origin is seeping out of the ground in unusual quantities at several locations around the flanks of Mammoth Mountain, a dormant volcano in Eastern California. The most recent volcanic activity on Mammoth Mountain was steam eruptions about 600 years ago, but seismic swarms and long-period earthquakes over the past decade are evidence of an active magmatic system at depth. The CO 2 emission probably began in 1990 but was not recognized until 1994. Seismic swarms and minor ground deformation during 1989, believed to be results of a shallow intrusion of magma beneath Mammoth Mountain, probably triggered the release of C0 1 , which persists in 1998. The CO 2 gas is at ambient temperatures and emanates diffusely from the soil surface rather than flowing from distinct vents. The CO 2 has collected in the soil by displacing air in the pore spaces and reaches concentrations of greater than 95 percent by volume in places. The total area affected by high CO 2 concentrations and high CO 2 flux from the soil surface was estimated at 60 hectares in 1997. Coniferous forest covering about 40 hectares has been killed by high CO 2 , concentrations in the root zone. In more than 300 soil-gas samples collected from depths of 0.5 to 2 m in 1995, CO 2 concentrations ranged from background levels (less than 1 percent) to greater than 95 percent by volume. At 250 locations, CO 2 flux was measured using a closed chamber in 1996; values, in grams per square meter per day, ranged from background (less than 25) to more than 30,000. On the basis of these data, the total emission of magmatic CO 2 , in 1996 is estimated to be about 530 megagrams per day. Concentrations of CO 2 , exceeding Occupational Safety and Health Administration standards have been measured in pits dug in soil and snow, in poorly ventilated buildings, and in below-ground valve-boxes around Mammoth Mountain. CO 2 , concentrations greater than 10 percent in poorly ventilated spaces are not uncommon on some parts of Mammoth Mountain. Humans and other animals exposed to CO 2 concentrations greater than 10 percent could lose consciousness and die rapidly. With knowledge of the problem and reasonable caution, however, the health hazard to humans can be avoided. As noted earlier, the CO 2 emission is related to magmatic activity at depth, but at present (1998) it does not portend an imminent volcanic eruption.

California↗

Information Resources Management

The Information Resources Management (IRM) Team, in the Geographic Information Office (GIO) of the U.S. Geological Survey (USGS), manages compliance with information mandates defined by Public Law, the Office of Management and Budget (OMB) (specifically Circular A- 130), the National Archives and Records Administration, the Department of the Interior (DOl), and other official sources. The team uses a variety of mechanisms to fulfill USGS IRM requirements from coordination through USGS-wide teams, to topical training sessions, to one-on-one communications with individual USGS programs. In addition, the team serves as a bureau contact for Federal Register notices and as the group contact for USGS Federal Advisory Committees. Currently, an IRM employee-awareness training course is being developed, in coordination with the DOl, that will provide an overview of IRM requirements. Below is a list of some of the Federal mandates for which the IRM team ensures USGS compliance.

Fact Sheet↗

Assessing water quality from highway runoff at selected sites in North Carolina with the Stochastic Empirical Loading and Dilution Model (SELDM)

In 2015, the U.S. Geological Survey (USGS) entered into a cooperative agreement with the North Carolina Department of Transportation (NCDOT) to develop a North Carolina-enhanced variation of the national Stochastic Empirical Loading and Dilution Model (SELDM) with available North Carolina-specific streamflow and water-quality data and to demonstrate use of the model by documenting selected simulation scenarios. The USGS developed the national SELDM in cooperation with the Federal Highway Administration (FHWA) to provide the tools and techniques necessary for performing stormwater-quality simulations. SELDM uses a stochastic mass-balance approach to estimate combinations of flows, concentrations, and loads of stormwater constituents from the site of interest (often a highway catchment; nonhighway areas, such as a large impervious area at a shopping center complex, also can be used) and the basin upstream from the stormwater outfall to assess the risk for adverse effects of runoff. SELDM also can be used to simulate the effectiveness of volume reduction, hydrograph extension, and water-quality concentration reductions by stormwater best management practices (BMPs), which are designed to help mitigate the effects of runoff on receiving water bodies. Some of the statistical inputs needed for the North Carolina-enhanced SELDM were either calculated or augmented using local or regional data from North Carolina. Streamflow statistics used by SELDM were determined for 266 streamgages across North Carolina on the basis of data available through the 2015 water year. Recession ratio statistics used for triangular hydrographs were also developed for 30 streamgages across the State. The NCDOT identified previous research reports on highway-runoff and BMP studies in North Carolina for review of potential data addition to the national FHWA Highway-Runoff Database (HRDB). Following USGS review of these data, a total of 25,087 event mean concentration values and 1,140 storm events for 39 highway-runoff sites and 195 analytes were uploaded to the national HRDB from six North Carolina highway-runoff research reports and a recent USGS bridge deck runoff study. Using data for 27 streamgages in North Carolina, a total of 57 water-quality transport curves were developed for seven constituents for use in simulating water-quality conditions in the upstream basin. Performance data for three BMPs (bioretention, grass strip or swale, and wetland channel) from NCDOT research data were incorporated into the North Carolina-enhanced SELDM for volume-reduction statistics, including the effectiveness of treating four water-quality constituents (total suspended solids, total nitrogen, total phosphorus, nitrate plus nitrite) and turbidity. Simulations using the North Carolina-enhanced SELDM are presented for two hypothetical upstream basins in the Piedmont ecoregion and one hypothetical highway site to demonstrate how simulations can be used to provide risk-based information about potential effects of stormwater runoff on downstream water quality and the potential for mitigating those risks by using BMPs. The first group of simulations explores the stochastic variability in dilution factors (the ratio of the highway runoff to the total downstream stormflow) for a hypothetical Piedmont rural creek having drainage areas ranging from 1 to 100 square miles. The second group of simulations examines dilution factors based on variations in precipitation, streamflow, and recession ratios for two hypothetical Piedmont upstream basins (rural and urban) where the drainage area was held constant at 25 square miles. These simulations indicate the sensitivity of results to variations in each of the three variables. The third group of simulations examines the effects of varied concentrations in the upstream basin on water-quality conditions downstream from the highway crossing. Variations in upstream water-quality conditions for three constituents (suspended sediment concentration, total nitrogen, and total phosphorus) are based on water-quality transport curves selected from among the 57 curves developed as part of this study to represent low-, medium-, and high-concentration statistics. Simulations completed for this third group also examine the potential effects of grass swale and bioretention BMP treatment on total nitrogen and total phosphorus concentrations in highway runoff. The BMP performance data from the NCDOT research reports were applied in this group of simulations. The stochastic mass-balance approach used in SELDM analyses and simulations provides a strong tool for engineers and water-resource managers to use in exploring a wide range of possible hydrologic and water-quality inputs and their effects on downstream water quality. The results of this study can not only aid engineers and managers in planning for potential adverse effects of runoff at site-specific locations, they can also help the USGS and other Federal and State agencies with oversight responsibilities in stormwater-quality issues to continue gathering data on potential water-quality effects in receiving streams.

North Carolina↗

Cooperative Fish and Wildlife Research Units program—2018 year in review

The Cooperative Fish and Wildlife Research Units (CRU) program had an interesting and challenging year in 2018. We made significant strategic advances on many fronts and had setbacks in others. Our relationship with the U.S. Fish and Wildlife Service, the agency we belonged to from 1935 to the mid-1990s, was further reinforced through strategic efforts with the Service’s Science Applications senior staff. This is bearing fruit in terms of research collaborations and funding support. As part of a larger effort between the U.S. Geological Survey (USGS) Ecosystems Mission Area and the Service’s endangered species program, we are also collaborating to address science needs for species in pre-listing status. Barry Grand, Unit Supervisor (South), has been instrumental in this effort. Tom Edwards of the Utah Unit has met with representatives of the U.S. Fish and Wildlife Service and the Association of Fish and Wildlife Agencies to promote training of leaders and “hands dirty” biologists in species distribution modeling. The Association passed a unanimous resolution endorsing the training at their midyear meeting in March. Tom held a workshop at the annual meeting of the Association of Fish and Wildlife Agencies in September, and future workshops, supported by the U.S. Fish and Wildlife Service, will be held bringing State agency and U.S. Fish and Wildlife Service biologists together to work on species of common concern. Wyoming Unit Leader Matt Kauffman’s pioneering work in identifying and mapping big-game migration corridors has captured the attention of conservationists far and wide. In the spring, the Secretary of the Interior signed Secretarial Order No. 3362, "Improving Habitat Quality in Western Big-Game Winter Range and Migration Corridors" directing efforts of several U.S. Department of the Interior (DOI) bureaus to collaborate with States in identifying and protecting big-game corridors in 11 States. Matt has conducted several workshops that directly support the Secretarial order, and more are planned. Corridor mapping efforts supported by the USGS and the DOI, based in the States and coordinated by Matt, are unfolding. Unit Administrative Officer Shana Coulby and her staff hosted a training program for university support staff at USGS National Headquarters in March. Shana’s team did a superb job, and the camaraderie among all was evident. We co-sponsored the third in a series of workshops at the North American Wildlife and Natural Resources Conference in March on bridging the gap between science and management. The State Department requested that we coordinate a workshop that would bring CRU scientists and other U.S. representatives together with Brazilian, Colombian, and Peruvian scientists and decision makers to develop best practices to minimize environmental damage from infrastructure development in the Amazon and to collaborate on science needs. The workshop was held in Iquitos, Peru, in the heart of the Amazon during August. Our cooperator community, represented by the National Cooperators Coalition, was very active in response to the President’s budget proposal that would have redirected funding for the CRU program to other priorities. Their efforts are reflected in the House and Senate marks on the fiscal year 2019 budget that not only restored funding, but recommended increases. You will see in this report many other accomplishments of our individual scientists and students during 2018. It was an impressive and productive year! What you won’t see chronicled is the work of the CRU headquarters staff and University support staff. These folks are extraordinary in their dedication to working with cooperators and scientists to solve problems and ensure the important work gets accomplished with minimal interference. We are truly fortunate to have such skilled and dedicated folks in the trenches. I was fortunate to visit several units during 2018. For me, this is the most enriching part of my duties. I get to see firsthand the work our scientists do, the incredible students being mentored, and meet our cooperators on their turf. As we look forward towards the horizon, 2019 looks brighter for the CRU program. Efforts by our cooperators to generate support for filling our vacancies are materializing. Our cadre of scientists is second to none, and the breadth and depth of our work are nothing short of impressive. Thanks to all who are part of this cooperative endeavor—conservation is the ultimate winner in our efforts!

Circular↗

Overview of environmental and hydrogeologic conditions at Saint Marys, Alaska

The Federal Aviation Administration (FAA) owns or operates airway support facilities near Saint Marys along the Yukon River in west-central Alaska. The FAA is evaluating the severity of environmental contamination and options for remediation of environmental contamination at their facilities. Saint Marys is on a flood plain near the continence of the Yukon and Andreafsky Rivers and has long cold winters and short summers. Residents obtain their drinking water from an infiltration gallery fed by a creek near the village. Surface spills and disposal of hazardous materials combined with potential flooding may affect the quality of the surface and ground water. Alternative drinking-water sources are available, but would likely cost more than existing supplies to develop.

Open-File Report↗

Alteration, slope-classified alteration, and potential lahar inundation maps of volcanoes for the Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) Volcano Archive

This study identifies areas prone to lahars from hydrothermally altered volcanic edifices on a global scale, using visible and near infrared (VNIR) and short wavelength infrared (SWIR) reflectance data from the Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) and digital elevation data from the ASTER Global Digital Elevation Model (GDEM) dataset. This is the first study to create a global database of hydrothermally altered volcanoes showing quantitatively compiled alteration maps and potentially affected drainages, as well as drainage-specific maps illustrating modeled lahars and their potential inundation zones. We (1) identified and prioritized 720 volcanoes based on population density surrounding the volcanoes using the Smithsonian Institution Global Volcanism Program database (GVP) and LandScan™ digital population dataset; (2) validated ASTER hydrothermal alteration mapping techniques using Airborne Visible and Infrared Imaging Spectrometer (AVIRIS) and ASTER data for Mount Shasta, California, and Pico de Orizaba (Citlaltépetl), Mexico; (3) mapped and slope-classified hydrothermal alteration using ASTER VNIR-SWIR reflectance data on 100 of the most densely populated volcanoes; (4) delineated drainages using ASTER GDEM data that show potential flow paths of possible lahars for the 100 mapped volcanoes; (5) produced potential alteration-related lahar inundation maps using the LAHARZ GIS code for Iztaccíhuatl, Mexico, and Mount Hood and Mount Shasta in the United States that illustrate areas likely to be affected based on DEM-derived volume estimates of hydrothermally altered rocks and the ~2x uncertainty factor inherent within a statistically-based lahar model; and (6) saved all image and vector data for 3D and 2D display in Google Earth ™ , ArcGIS ® and other graphics display programs. In addition, these data are available from the ASTER Volcano Archive (AVA) for distribution (available at http://ava.jpl.nasa.gov/recent_alteration_zones.php ). Using the GVP and the LandScan™ digital population dataset, 350 of the most densely populated stratovolcanoes were assessed for study. Of the 350 volcanoes, 250 volcanoes were not mapped due to excessive snow, ice, and (or) vegetation. Results from mapping the remaining 100 stratovolcanoes show that 87 contain slopes with hydrothermal alteration, and 49 have hydrothermally altered rocks on steep slopes situated above areas with populations >100 people per km 2 . Of these, 17 stratovolcanoes exhibit laterally extensive hydrothermal alteration on slopes >35° and cover an area >0.25 km 2 , which may pose a significant possibility of generating debris flows. This study was undertaken during 2012–2013 in cooperation with the National Aeronautics and Space Administration (NASA). Since completion of this study, a new lahar modeling program (LAHAR_pz) has been released, which may produce slightly different modeling results from the LAHARZ model used in this study. The maps and data from this study should not be used in place of existing volcano hazard maps published by local authorities. For volcanoes without hazard maps and (or) published lahar-related hazard studies, this work will provide a starting point from which more accurate hazard maps can be produced. This is the first dataset to provide digital maps of altered volcanoes and adjacent watersheds that can be used for assessing volcanic hazards, hydrothermal alteration, and other volcanic processes in future studies.

Scientific Investigations Report↗

South San Francisco Bay, California

The U.S. Geological Survey, in cooperation with the California Coastal Conservancy and the National Oceanic and Atmospheric Administration, mapped the floor of south San Francisco Bay and adjoining land using single-beam sonar and airborne lidar (light detection and ranging). To learn more, visit http://pubs.usgs.gov/sim/2007/2987/. View eastward. Elevations in mapped area color coded: purple (approx 15 m below sea level) to red-orange (approx 90 m above sea level). South San Francisco Bay is very shallow, with a mean water depth of 2.7 m (8.9 ft). Trapezoidal depression near San Mateo Bridge is where sediment has been extracted for use in cement production and as bay fill. Land from USGS digital orthophotographs (DOQs) overlaid on USGS digital elevation models (DEMs). Distance across bottom of image approx 11 km (7 mi); vertical exaggeration 1.5X.

California↗