Suspended sediment in San Francisco Bay Estuary, California: Recent history and available data sets
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The Hudson River is being considered for use as a supplemental source of water supply for New York City during droughts. One proposal entails withdrawal of Hudson River water from locations near Newburgh, Chelsea, or Kingston, but the extent to which this could cause the salt front to advance upstream to points where it could adversely affect community water supplies is unknown. The U.S. Geological Survey (USGS) one-dimensional Branch-Network Dynamic Flow model (BRANCH) was used in conjunction with the USGS one-dimensional Branched Lagrangian Solute-Transport Model (BLTM) to simulate the effect of five water-withdrawal scenarios on the salt-front location. The modeled reach contains 132 miles of the lower Hudson River between the Federal Dam at Troy and Hastings-on-Hudson (near New York City). The BRANCH model was calibrated and verified to 19 tidal-cycle discharge measurements made at 11 locations by conventional and acoustic Doppler current-profiler methods. Maximum measured instantaneous tidal flow ranged from 20,000 ft 3 /s (cubic feet per second) at Albany to 368,000 ft 3 /s at Tellers Point; daily-mean flow at Green Island near Troy ranged from 3,030 ft 3 /s to 45,000 ft 3 /s during the flow measurements. Successive ebb- and flood-flow volumes were measured and compared with computed volumes; daily-mean bias was -1.6 percent (range from -21.0 to +23.7 percent; 13.5 percent mean absolute error). Daily-mean deviation between simulated and measured stage at eight locations (from Bowline Point to Albany) over the 19 tidal-cycle measurements averaged +0.06 ft (range from -0.31 to +0.40 ft; 0.21 ft root mean square error, RMSE). These results indicate that the model can accurately simulate flow in the Hudson River under a wide range of flow, tide, and meteorological conditions. The BLTM was used to simulate chloride transport in the 61-mi reach from Turkey Point to Bowline Point under two seasonal conditions in 1990.one representing spring conditions of high inflow and low salinity (April-June), the other representing typical summer conditions of low inflow and high salinity (July-August). Measured chloride concentrations at Bowline Point were used to drive the BLTM simulations, and data collected at West Point were used for calibration. Mean bias in simulated chloride concentration for the April-June 1990 (high flow) data (observed range from 12 to 201 mg/L [milligrams per liter]; 30 mg/L RMSE) was .16 mg/L, and mean bias for the July-August 1990 (low flow) data (observed range from 31 to 2,000 mg/L; 535 mg/ L RMSE) was +126 mg/L. The salt front (saltwater/ freshwater interface) on the Hudson River was defined as the furthest upstream location where the chloride concentration exceeded 100 mg/L. Data from August 1991 were used to evaluate solute transport between West Point and Poughkeepsie because a chloride concentration of 100 mg/L was not observed at Clinton Point in 1990. The BLTM then was used to simulate chloride concentrations at Chelsea Pump Station and Clinton Point. Regression equations, based on daily mean values of specific conductance measured at West Point, were used to estimate daily mean chloride concentrations at Chelsea Pump Station and Clinton Point for model analysis. Mean biases in BLTM-simulated daily mean chloride concentrations for August 1991 were .38 mg/L at Chelsea Pump Station (range from 189 to 551 mg/L; 103 mg/L RMSE) and .9 mg/L at Clinton Point (range from 53 to 264 mg/L; 62 mg/L RMSE). Hypothetical withdrawals at (1) Newburgh, (2) Chelsea, (3) Chelsea and Newburgh, (4) Chelsea and Kingston, and (5) Kingston and Newburgh, were simulated to compute the effects of withdrawals on salt-front movement. Withdrawals of 300 Mgal/d from any combination of Chelsea or Newburgh could result in upstream movement of the salt front of as much as 1.0 mi, given an initial salt-front location between West Point and Rogers Point. Scenarios that included withdrawals at Kingston caused the greatest upstream salt-front movement. Simulation of a 90-day April-June high-flow period during which discharges at Green Island averaged 25,200 ft 3 /s indicated that withdrawals of 1,939 Mgal/d (million gallons per day) at Chelsea Pump Station would not measureably increase chloride concentrations at Chelsea Pump Station under normal tidal and meteorological conditions, but withdrawals at twice that rate (3,878 Mgal/d) could increase the chloride concentration at Chelsea Pump Station to 250 mg/L.
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Shallow coastal systems worldwide are exhibiting increased algal growth in response to nutrient enrichment. This study evaluates primary production patterns in an estuarine system (Bass Harbor Marsh, Maine) receiving low levels of anthropogenic nitrogen. Biomass, areal coverage and in situ oxygen production of green macroalgae, Ruppia maritima, and phytoplankton were measured over a growing season to determine net ecosystem production. Macroalgae and Ruppia exhibited strong seasonal biomass curves with early summer peaks; however, peak biomass of macroalgae (150 g dwt m-2) was substantially greater than Ruppia (33 g dwt m-2). Phytoplankton biomass, measured as chlorophyll a, was low (<1 ug l-1) early in the season and peaked (11 ug l-1) following a mid-summer decline in macroalgal biomass, suggesting a competitive interaction with macroalgae. Instantaneous net production rates varied over the growing season for all three primary producers. Ruppia net production ranged from near zero to 3.7 mg C g dwt-1 h-1, with higher rates during summer and much of the seasonal variability explained by temperature. Macroalgal (0.88 - 5.0 mg C g dwt-1 h-1) and phytoplankton (0 - 28 mg C m-3 h-1) net production did not exhibit any clear seasonal signal. Net primary production calculated on an areal basis demonstrated macroalgae's dominance in the lower basin of Bass Harbor Marsh, with peak summer rates (400 mg C m-2 h-1) greatly exceeding maximum rates for both Ruppia (70 mg C m-2 h-1) and phytoplankton (12 mg C m-2 h-1). When compared to other New England estuarine sites with short residence times, nutrient loading and peak green macroalgal biomass in Bass Harbor Marsh is relatively low; however, the strong dominance of opportunistic green macroalgae is a pattern that is characteristic of shallow coastal systems undergoing eutrophication.
Quantitative, broadly applicable metrics of resilience are needed to effectively manage tidal marshes into the future. Here we quantified three metrics of temporal marsh resilience: time to marsh drowning, time to marsh tipping point, and the probability of a regime shift, defined as the conditional probability of a transition to an alternative super-optimal, suboptimal, or drowned state. We used organic matter content (loss on ignition, LOI) and peat age combined with the Coastal Wetland Equilibrium Model (CWEM) to track wetland development and resilience under different sea-level rise scenarios in the Sacramento-San Joaquin Delta (Delta) of California. A 100-year hindcast of the model showed excellent agreement ( R 2 = 0.96) between observed (2.86 mm/year) and predicted vertical accretion rates (2.98 mm/year) and correctly predicted a recovery in LOI ( R 2 = 0.76) after the California Gold Rush. Vertical accretion in the tidal freshwater marshes of the Delta is dominated by organic production. The large elevation range of the vegetation combined with high relative marsh elevation provides Delta marshes with resilience and elevation capital sufficiently great to tolerate centenary sea-level rise (CLSR) as high as 200 cm. The initial relative elevation of a marsh was a strong determinant of marsh survival time and tipping point. For a Delta marsh of average elevation, the tipping point at which vertical accretion no longer keeps up with the rate of sea-level rise is 50 years or more. Simulated, triennial additions of 6 mm of sediment via episodic atmospheric rivers increased the proportion of marshes surviving from 51% to 72% and decreased the proportion drowning from 49% to 28%. Our temporal metrics provide critical time frames for adaptively managing marshes, restoring marshes with the best chance of survival, and seizing opportunities for establishing migration corridors, which are all essential for safeguarding future habitats for sensitive species.
The primary source of chronic exposures to per- and polyfluoroalkyl substances (PFASs) in humans is through the ingestion of contaminated foods and drinking water, with fish and other seafood being a major contributor. Nevertheless, there is scant literature on the dietary exposure to PFASs for the general United States (U.S.) population. The Tampa Bay (Florida, USA) region has the highest population density in the State and communities and their attendant support services are arrayed in an urban to semi-rural continuum from the head of the Bay to the ocean mouth. Tampa Bay supports productive recreational and commercial fisheries, providing a diverse community of species. A variety of potential PFAS sources surround Tampa Bay including airports, industry, wastewater treatment plants, fire-fighting training areas and military installations. The objective of this study is to quantify PFASs in sediment and fishes collected from Tampa Bay to further estimate human health risks from dietary exposures. Sediment ( n = 17) and fish (24 species, n = 140) were collected throughout Tampa Bay in 2020 and 2021 and analyzed for 25 PFAS compounds. Concentrations of PFASs in sediments and edible tissues of fish ranged from 36.8 to 2,990 ng kg -1 (dry weight) and 307 to 33,600 ng kg -1 (wet weight), respectively. Generally, levels were highest in Old Tampa Bay and decreased south towards the Gulf of Mexico. Profiles in both matrices were generally dominated by perfluorooctane sulfonic acid (PFOS) with variations by location. Estimated human health risks from the consumption of contaminated fish collected in Tampa Bay exceeded concentration thresholds for minimum risk levels (MRLs) and tolerable weekly intake (TWIs) values for adults and youths. Additionally, concentrations of PFOS in edible fish tissues of several recreationally important species collected in Tampa Bay exceeded consumption guideline levels established by several governmental agencies. In the current context, the elevated levels of PFAS in Tampa Bay and the exceedances of available thresholds for potential human health risks are a cause for concern and justify a more intensive examination especially for more heavily utilized species, particularly those used in subsistence-level fishing, which, as elsewhere may be significantly under documented.
When you look at San Francisco Bay, what animals do you see? You may see lots of fish swimming around and birds flying above. What you DON’T see is Potamocorbula, a little clam that has had a big impact. Many years ago, ships accidentally brought Potamocorbula into the Bay. Pretty soon, Potamocorbula spread out all over in large numbers! Clams pump water over their gills and eat small particles of food, like phytoplankton, that pass through with the water. Potamocorbula can pump water much faster than other clams that live in the Bay, and they can eat more than their share of phytoplankton. Sometimes Potamocorbula eats phytoplankton faster than phytoplankton can grow! What problems does that cause for other animals, like birds and fish, that also need phytoplankton? Does Potamocorbula’s invasion only have negative impacts? In this article, we dive to the bottom of the Bay to find some answers. Book series publishing the chapter: https://kids.frontiersin.org/collection/13528/where-the-river-meets-the-ocean-stories-from-san-francisco-estuary
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Shallow stratigraphic features, such as infilled paleovalleys, modify fresh groundwater discharge to coastal waters and fluxes of saltwater and nutrients across the sediment–water interface. We quantify the spatial distribution of shallow surface water–groundwater exchange and nitrogen fluxes near a paleovalley in Indian River Bay, Delaware, using a hand resistivity probe, conventional seepage meters, and pore-water samples. In the interfluve (region outside the paleovalley) most nitrate-rich fresh groundwater discharges rapidly near the coast with little mixing of saline pore water, and nitrogen transport is largely conservative. In the peat-filled paleovalley, fresh groundwater discharge is negligible, and saltwater exchange is deep (∼1 m). Long pore-water residence times and abundant sulfate and organic matter promote sulfate reduction and ammonium production in shallow sediment. Reducing, iron-rich fresh groundwater beneath paleovalley peat discharges diffusely around paleovalley margins offshore. In this zone of diffuse fresh groundwater discharge, saltwater exchange and dispersion are enhanced, ammonium is produced in shallow sediments, and fluxes of ammonium to surface water are large. By modifying patterns of groundwater discharge and the nature of saltwater exchange in shallow sediments, paleovalleys and other stratigraphic features influence the geochemistry of discharging groundwater. Redox reactions near the sediment–water interface affect rates and patterns of geochemical fluxes to coastal surface waters. For example, at this site, more than 99% of the groundwater-borne nitrate flux to the Delaware Inland Bays occurs within the interfluve portion of the coastline, and more than 50% of the ammonium flux occurs at the paleovalley margin.
Submarine groundwater discharge was quantified by a variety of methods for a 4-day period during the early summer of 2004, in Salt Pond, adjacent to Nauset Marsh, on Cape Cod, USA. Discharge estimates based on radon and salinity took advantage of the presence of the narrow channel connecting Salt Pond to Nauset Marsh, which allowed constructing whole-pond mass balances as water flowed in and out due to tidal fluctuations. The data suggest that less than one quarter of the discharge in the vicinity of Salt Pond happened within the pond itself, while three quarters or more of the discharge occurred immediately seaward of the pond, either in the channel or in adjacent regions of Nauset Marsh. Much of this discharge, which maintains high radon activities and low salinity, is carried into the pond during each incoming tide. A box model was used as an aid to understand both the rates and the locations of discharge in the vicinity of Salt Pond. The model achieves a reasonable fit to both the salinity and radon data assuming submarine groundwater discharge is fresh and that most of it occurs either in the channel or in adjacent regions of Nauset Marsh. Salinity and radon data, together with seepage meter results, do not rule out discharge of saline groundwater, but suggest either that the saline discharge is at most comparable in volume to the fresh discharge or that it is depleted in radon. The estimated rate of fresh groundwater discharge in the vicinity of Salt Pond is 3000-7000 m 3 d -1 . This groundwater flux estimated from the radon and salinity data is comparable to a value of 3200-4500 m 3 d -1 predicted by a recent hydrologic model (Masterson, 2004; Colman and Masterson, 2004), although the model predicts this rate of discharge to the pond whereas our data suggest most of the groundwater bypasses the pond prior to discharge. Additional work is needed to determine if the measured rate of discharge is representative of the long-term average, and to better constrain the rate of groundwater discharge seaward of Salt Pond.
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Federal efforts to determine pesticide levels in fish and wildlife are being carried out by the Bureau of Sport Fisheries and Wildlife, U. S. Department of the Interior. Monitoring estuarine pesticide levels in clams, oysters, and sediments is a joint endeavor of the Bureau of Commercial Fisheries, U. S. Department of the Interior, and the Water Supply and Sea Resources Program of the National Center for Urban and Industrial Health, Public Health Service, U. S. Department of Health, Education, and Welfare.