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At least 451 records · Page 25Linked to original sources

Records of continental slope sediment flow morphodynamic responses to gradient and active faulting from integrated AUV and ROV data, offshore Palos Verdes, southern California Borderland

Variations in seabed gradient are widely acknowledged to influence deep-water deposition, but are often difficult to measure in sufficient detail from both modern and ancient examples. On the continental slope offshore Los Angeles, California, autonomous underwater vehicle, remotely operated vehicle, and shipboard methods were used to collect a dense grid of high-resolution multibeam bathymetry, chirp sub-bottom profiles, and targeted sediment core samples that demonstrate the influence of seafloor gradient on sediment accumulation, depositional environment, grain size of deposits, and seafloor morphology. In this setting, restraining and releasing bends along the active right-lateral Palos Verdes Fault create and maintain variations in seafloor gradient. Holocene down-slope flows appear to have been generated by slope failure, primarily on the uppermost slope (~ 100–200 m water depth). Turbidity currents created a low relief (< 10 m) channel, up-slope migrating sediment waves (λ = ~ 100 m, h ≤ 2 m), and a series of depocenters that have accumulated up to 4 m of Holocene sediment. Sediment waves increase in wavelength and decrease in wave height with decreasing gradient. Integrated analysis of high-resolution datasets provides quantification of morphodynamic sensitivity to seafloor gradients acting throughout deep-water depositional systems. These results help to bridge gaps in scale between existing deep-sea and experimental datasets and may provide constraints for future numerical modeling studies.

Marine Geology↗

Exclusion of small mammals and lagomorphs invasion interact with human-trampling to drive changes in topsoil microbial community structure and function in semiarid Chile

Species losses and additions can disrupt the relationship between resident species and the structure and functioning of ecosystems. Persistent human-trampling, on the other hand, can have similar effects through the disruption of biocrusts on surface soils of semiarid systems, affecting soil stability and fixation of carbon and nitrogen. Here, we tested the interactive and synergistic impacts of the exclusion of native mammalian herbivores and the effects of introduced lagomorphs in a semiarid thorn scrub ecosystem, where soils were subjected to two different trampling intensities (i.e., trampled and non-trampled). We postulated that because of their differential habitat use and fossorial activities, with respect to native small mammals, lagomorphs would have strong negative effects on soil structure, biocrust cover, and biocrust bacterial community structure. Our expectations were that changes in biocrust cover in response to trampling where native mammals were excluded, but exotic lagomorphs were present, will spread their impacts on soil chemical and physical features. To test our hypotheses, we measured changes in soil biogeochemical properties in four experimental plots where lagomorphs (L)/small mammals (SM) were experimentally manipulated to exclude them from the plots (−), or let them be present (+). The experimental combinations monitored were: -L/+SM, -L/-SM, +L/+SM, and +L/-SM. Results showed that human-trampling disturbance interacted with the loss of native small mammals and the presence of non-native lagomorphs to cause large changes on biological (i.e., biocrust cover, bacterial and nifH genes abundance), physical (i.e., soil moisture and soil stability) and chemical (i.e., TC and TN) soil features. The relative impacts of trampling disturbance on biological and physicochemical features were strongly influenced by the presence of non-native lagomorphs. For example, larger decreases in biocrust cover and bacterial abundance were observed in treatments without lagomorphs (-L/+SM; -L/-SM). In turn, losses of biocrust cover, in addition to trampling, determined decreases in soil stability in all treatments. These results suggest that non-native lagomorphs surpass the effects of the loss of native small mammals in reducing soil quality and productivity. Therefore, human-trampling has the potential to convert low disturbed soils, as those observed in non-trampled soils in treatments -L/+SM, -L/-SM into poor soils with low biocrusts cover and concomitant low stability, as observed in +L/+SM; +L/-SM treatments. These findings agree with previous observations that different components of global change act in synergic ways in fragile, water-limited environments. Because biological invasions and soil surface disturbance are becoming widespread in dryland regions globally, understanding the long-term consequences of these interactions is essential.

Fray Jorge National Park↗

Bayesian estimation of weak material dispersion: Theory and experiment

This work considers the estimation of dispersion in materials via an interferometric technique. At its core, the problem involves extracting the quadratic variation in phase over a range of wavelengths based on measured optical intensity. The estimation problem becomes extremely difficult for weakly dispersive materials where the quadratic nonlinearity is very small relative to the uncertainty inherent in experiment. This work provides a means of estimating dispersion in the face of such uncertainty. Specifically, we use a Markov Chain Monte Carlo implementation of Bayesian analysis to provide both the dispersion estimate and the associated confidence interval. The interplay between various system parameters and the size of the resulting confidence interval is discussed. The approach is then applied to several different experimental samples.

Optics Express↗

Effects of hydroperiod duration on survival, developmental rate, and size at metamorphosis in boreal chorus frog tadpoles ( Pseudacris maculata )

Understanding the relationship between climate-driven habitat conditions and survival is key to preserving biodiversity in the face of rapid climate change. Hydroperiod—the length of time water is in a wetland—is a critical limiting habitat variable for amphibians as larvae must metamorphose before ponds dry. Changes in precipitation and temperature patterns are affecting hydroperiod globally, but the impact of these changes on amphibian persistence is poorly understood. We studied the responses of Boreal Chorus Frog ( Pseudacris maculata ) tadpoles to simulated hydroperiods (i.e., water level reductions) in the laboratory using individuals collected from ponds spanning a range of natural hydroperiods (Colorado Front Range, USA). To assess the effects of experimental hydroperiod reduction, we measured mortality, time to metamorphosis, and size at metamorphosis. We found that tadpoles grew at rates reflecting the hydroperiods of their native ponds, regardless of experimental treatment. Tadpoles from permanent ponds metamorphosed faster than those from ephemeral ponds across all experimental treatments, a pattern which may represent a predation selection gradient or countergradient variation in developmental rates. Size at metamorphosis did not vary across experimental treatments. Mortality was low overall but varied with pond of origin. Our results suggest that adaptation to local hydroperiod and/or predation and temperature conditions is important in P. maculata . Moreover, the lack of a plastic response to reduced hydroperiods suggests that P. maculata may not be able to metamorphose quickly enough to escape drying ponds. These results have important implications for amphibian persistence in ponds predicted to dry more quickly due to rapid climate change.

Herpetologica↗

The role of reaction affinity and secondary minerals in regulating chemical weathering rates at the Santa Cruz Soil Chronosequence, California

In order to explore the reasons for the apparent discrepancy between laboratory and field weathering rates and to determine the extent to which weathering rates are controlled by the approach to thermodynamic equilibrium, secondary mineral precipitation, and flow rates, a multicomponent reactive transport model (CrunchFlow) was used to interpret soil profile development and mineral precipitation and dissolution rates at the 226 ka Marine Terrace Chronosequence near Santa Cruz, CA. Aqueous compositions, fluid chemistry, transport, and mineral abundances are well characterized [White A. F., Schulz M. S., Vivit D. V., Blum A., Stonestrom D. A. and Anderson S. P. (2008) Chemical weathering of a Marine Terrace Chronosequence, Santa Cruz, California. I: interpreting the long-term controls on chemical weathering based on spatial and temporal element and mineral distributions. Geochim. Cosmochim. Acta 72 (1), 36-68] and were used to constrain the reaction rates for the weathering and precipitating minerals in the reactive transport modeling. When primary mineral weathering rates are calculated with either of two experimentally determined rate constants, the nonlinear, parallel rate law formulation of Hellmann and Tisserand [Hellmann R. and Tisserand D. (2006) Dissolution kinetics as a function of the Gibbs free energy of reaction: An experimental study based on albite feldspar. Geochim. Cosmochim. Acta 70 (2), 364-383] or the aluminum inhibition model proposed by Oelkers et al. [Oelkers E. H., Schott J. and Devidal J. L. (1994) The effect of aluminum, pH, and chemical affinity on the rates of aluminosilicate dissolution reactions. Geochim. Cosmochim. Acta 58 (9), 2011-2024], modeling results are consistent with field-scale observations when independently constrained clay precipitation rates are accounted for. Experimental and field rates, therefore, can be reconciled at the Santa Cruz site. Additionally, observed maximum clay abundances in the argillic horizons occur at the depth and time where the reaction fronts of the primary minerals overlap. The modeling indicates that the argillic horizon at Santa Cruz can be explained almost entirely by weathering of primary minerals and in situ clay precipitation accompanied by undersaturation of kaolinite at the top of the profile. The rate constant for kaolinite precipitation was also determined based on model simulations of mineral abundances and dissolved Al, SiO 2 (aq) and pH in pore waters. Changes in the rate of kaolinite precipitation or the flow rate do not affect the gradient of the primary mineral weathering profiles, but instead control the rate of propagation of the primary mineral weathering fronts and thus total mass removed from the weathering profile. Our analysis suggests that secondary clay precipitation is as important as aqueous transport in governing the amount of dissolution that occurs within a profile because clay minerals exert a strong control over the reaction affinity of the dissolving primary minerals. The modeling also indicates that the weathering advance rate and the total mass of mineral dissolved is controlled by the thermodynamic saturation of the primary dissolving phases plagioclase and K-feldspar, as is evident from the difference in propagation rates of the reaction fronts for the two minerals despite their very similar kinetic rate laws. ?? 2009 Elsevier Ltd.

Geochimica et Cosmochimica Acta↗

Chemical and nutritional evaluation of soya protein preparations as primary nitrogen sources for rainbow trout (Oncorhynchus mykiss)

Five soya-bean preparations that had been subjected to various physicochemical processing procedures were chemically defined in respect to proximate analysis, amino acid analyses, protease inhibitor activity, soluble oligosaccharides and antigenicity. These soya preparations were then formulated, along with a low-temperature fish meal control, into six isonitrogenous and isocaloric experimental diets. The diets were fed to rainbow trout ( Oncorhynchus mykiss ) in feeding trials as well as in tests using specially constructed metabolic chambers. Based on the chemical and biological results, we concluded that soya-bean oligosaccharides do not have to be removed or modified for maximum growth or nitrogen utilization by rainbow trout. Likewise, the protease or trypsin inhibitor activity, which was low for all experimental treatments, did not appear to be a major factor in determining fish performance. Although the results regarding naturally occurring soya antigens only suggested allergenicity, it is concluded that more attention should be focused on these heat-stable proteins with antigenic or allergenic potential in fish diets.

Animal Feed Science and Technology↗

An alternative hypothesis for sink development above salt cavities in the Detroit area

Subsidence and sink formation resulting from brining operations in the Windsor-Detroit area include the 1954 sink at the Canadian Salt Company brine field near Windsor, Ontario, and the 1971 sinks at the BASF Wyandotte Corporation brine field at Grosse Ile, Mich. Earlier investigations into both occurrences concluded that the mechanism of sink development consisted of the gradual stoping of poorly supported brine-gallery roof rock to the near surface with subsequent surface collapse. A more recent study attempted to describe the mechanism of sink development in terms of the geometry of a cylindrical chimney formed by stoping of roof rock, the height of a cavity at depth, the depth of overlying rock, and the bulking ratio of the rubble formed during stoping. Persons with extensive experience in solution mining in the Windsor-Detroit area have expressed doubt that the stoping mechanism could fully explain the development of these sinks. Further, they have proposed that the relatively shallow (300-ft-deep) Sylvania Sandstone, in this case, may be responsible for the sinks by a secondary undermining mechanism to be examined in this paper. The mechanism involves downwarping of the beds overlying the salt cavity and development of a shallower cavity in the Sylvania Sandstone by downward migration of cohesionless sand grains from the Sylvania through openings in the disturbed rock to the lower cavity. This study indicates that under natural conditions the Sylvania will not migrate, even in the presence of large underground water flows because the sandstone possesses some cohesion throughout its depth. However, further investigation has formulated a mechanism that could allow the Sylvania Sandstone to loose its cohesion in response to high horizontal stresses. These stresses could be the result of deformation that accompanies general subsidence and (or) of past geologic processes. Included in this study were experimental and analytical investigations. As determined by uniaxial and triaxial testing, the Sylvania Sandstone in the Detroit area has been shown to have low compressive strength. In addition, it exhibits an explosive type failure whereby over 50 percent of the sample is reduced to loose granular sand. As a result of these characteristics, the Sylvania Sandstone can loose its cohesion when subjected to high horizontal stresses. Efforts at mechanically modeling the Sylvania were made to account for the measurements and observations. Linear arch theory was used for an elastic analysis. Linear arch theory predicts two modes of failure: (1) arch crushing, a compressive failure of the upper portion of the arch due to compressive stresses exceeding the compressive strength of the material, and (2) arch collapse, a sagging of the beds due to compressive strains which reduce the arch line to a length less than the original arch length. The arch crushing mode of failure would then yield the loose granular sand as observed in laboratory testing. Arch collapse would simply result in bed sagging without granulation of the sandstone. Arch collapse is favored by thin-bedded material while arch crushing is favored by thick-bedded material. Arch crushing seems to be a likely mode of failure for the Windsor-Detroit sinks. It is believed that after a crushing failure the sand-water slurry (specific gravity 1.2) which exceeds the density of the cavity brine will migrate downward through cracks and open joints eventually reaching the practically limitless open spaces of the rubble column and salt cavity. As the extent of the cavity within the Sylvania increases in depth and width because of sand migration, a critical span will be reached where the immediately overlying upper Sylvania and the overlying Detroit River Dolomite will fail. The collapse will allow a path for the approximately 100 ft of clay to collapse, resulting in a sink as the surface manifestation.

Open-File Report↗

Geochemical data for Upper Mineral Creek, Colorado, under existing ambient conditions and during an experimental pH modification, August 2005

Mineral Creek, an acid mine drainage stream in south-western Colorado, was the subject of a water-quality study that employed a paired synoptic approach. Under the paired synoptic approach, two synoptic sampling campaigns were conducted on the same study reach. The initial synoptic campaign, conducted August 22, 2005, documented stream-water quality under existing ambient conditions. A second synoptic campaign, conducted August 24, 2005, documented stream-water quality during a pH-modification experiment that elevated the pH of Mineral Creek. The experimental pH modification was designed to determine the potential reductions in dissolved constituent concentrations that would result from the implementation of an active treatment system for acid mine drainage. During both synoptic sampling campaigns, a solution containing lithium bromide was injected continuously to allow for the calculation of streamflow using the tracer-dilution method. Synoptic water-quality samples were collected from 30 stream sites and 11 inflow locations along the 2-kilometer study reach. Data from the study provide spatial profiles of pH, concentration, and streamflow under both existing and experimentally-altered conditions. This report presents the data obtained August 21-24, 2005, as well as the methods used for sample collection and data analysis.

Data Series↗

Striped Bass, morone saxatilis, egg incubation in large volume jars

The standard McDonald jar was compared with a large volume jar for striped bass, Morone saxatilis, egg incubation. The McDonald jar measured 16 cm in diameter by 45 cm in height and had a volume of 6 L. The experimental jar measured 0.4 m in diameter by 1.3 m in height and had a volume of 200 L. The hypothesis is that there is no difference in percent survival of fry hatched in experimental jars compared with McDonald jars. Striped bass brood fish were collected from the Coosa River and spawned using the dry spawn method of fertilization. Four McDonald jars were stocked with approximately 150 g of eggs each. Post-hatch survival was estimated at 48, 96, and 144 h. Stocking rates resulted in an average egg loading rate (??1 SE) in McDonald jars of 21.9 ?? 0.03 eggs/mL and in experimental jars of 10.9 ?? 0.57 eggs/mL. The major finding of this study was that average fry survival was 37.3 ?? 4.49% for McDonald jars and 34.2 ?? 3.80% for experimental jars. Although survival in experimental jars was slightly less than in McDonald jars, the effect of container volume on survival to 48 h (F = 6.57; df = 1,5; P > 0.05), 96 h (F = 0.02; df = 1, 4; P > 0.89), and 144 h (F = 3.50; df = 1, 4; P > 0.13) was not statistically significant. Mean survival between replicates ranged from 14.7 to 60.1% in McDonald jars and from 10.1 to 54.4% in experimental jars. No effect of initial stocking rate on survival (t = 0.06; df = 10; P > 0.95) was detected. Experimental jars allowed for incubation of a greater number of eggs in less than half the floor space of McDonald jars. As hatchery production is often limited by space or water supply, experimental jars offer an alternative to extending spawning activities, thereby reducing labor and operations cost. As survival was similar to McDonald jars, the experimental jar is suitable for striped bass egg incubation. ?? Copyright by the World Aquaculture Society 2010.

Journal of the World Aquaculture Society↗

Models of pure CO 2 and pure CH 4 adsorption on the late paleozoic coals from the Kailuan Coalfield, Hebei, China

Isothermal adsorption experiments of pure CO 2 and CH 4 on different coals in rank (the No. 11 Coal from the Linnancang Mine and the No. 9 Coal from the Majiagou Mine) from the Kailuan Coalfield of Hebei Province, China, have been studied. Four different models (Langmuir, BET, D-R, and D-A) were used to fit the experimental data of CO 2 and CH 4 adsorption and their fitting degree were investigated. The results showed that the adsorption capacity of the Majiagou coal(R o, ran = 1. 21%) is higher than that of the Linnancang coal (R o, ran = 0. 58%). The adsorption capacity of CO 2 is higher than that of CH 4 on the same coal under the same pressure. The adsorption isotherms of pure CO 2 and pure CH 4 on the Majiagou coal can be classified as Type I and their fitting errors of curves are very weak; thus the experimental data can be presented using the Langmuir isotherm. However, the adsorption of Linnancang coal is more complicated, and can be presented using D-A model because of its minimum error. Monolayer adsorption occurs during the adsorption of pure CO 2 and pure CH 4 on the No. 11 Coal and that of pure CH 4 on the No. 9 Coal.

Acta Geologica Sinica↗

Modeling long-term effects of fuel treatments on fuel loads and fire regimes in the Great Basin

The principal motivation for this study is that sagebrush-steppe ecosystems are undergoing significant state changes, and land managers are challenged with optimizing their resources for both short- and long-term use. Yet, limited knowledge is available regarding how the sagebrush-steppe will respond to environmental changes related to precipitation and temperature regimes, and disturbance such as fire. Furthermore, there is a lack of understanding on how fuels reduction and other fuel management activities will impact these ecosystems over the long-term. We addressed these challenges by adapting and testing a vegetation dynamics model, the Ecosystem Demography v2.2 model (EDv2.2), for the sagebrush-steppe. Vegetation dynamics models can provide estimations of ecosystem productivity in their natural and disturbance states, and thus serve as a tool to understand and predict potential changes in various processes and properties of vegetation communities. Yet, there is no vegetation dynamics model that is well-developed for the sagebrush-steppe, and thus significant effort is needed to test EDv2.2 for its application. As part of our efforts to develop the EDv2.2 model into a useful tool for the sagebrush-steppe, we developed a sagebrush plant functional type (PFT) as part of this study, and then performed sensitivity analyses, model calibration, and finally model evaluation. Furthermore, we developed several model scenarios under natural (undisturbed) and disturbed (fire) environments. We compared our model outputs with ground-based data (field and eddy covariance) and remote sensing observations. The results of our project include a sagebrush PFT that can be used in both future EDv2.2 modeling efforts and other vegetation dynamic models. Our results from the model sensitivity analysis indicate that specific leaf area (SLA), stomatal slope (STO_S), cuticular conductance (CUT_C), and carboxylase rate constant (VM0) are sensitive parameters to vegetation productivity in the model (based on gross primary production, GPP), and future modeling efforts will benefit from both lab and field studies of these parameters and sensitivity analyses. Through calibration, we found that the EDv2.2 model estimates of GPP were modeled well at our lowest elevation field site in Reynolds Creek Experimental Watershed (RCEW), which is dominated by Wyoming big sagebrush. On the contrary, we found poorer results at higher elevation site shrub sites. These sites are characterized by either low sagebrush or mountain big sagebrush, and have more forb cover than the low elevation site. In this project we also implemented the fire model in EDv2.2 to explore how shrub and C3 grasses respond to fire by analyzing post-fire GPP. We ran both point and regional model runs with fire introduced. In most fire scenarios, fire substantially reduced shrub GPP and it took several decades for shrub GPP to return to pre-fire conditions. Grass GPP responded more quickly in post-fire conditions. While these processes are representative of what other studies have found, significant efforts to improve the fire processes in EDv2.2 are needed. For example, nuances associated with the fire subroutine in the model (running periodic fire events versus instantaneous fires and fire intensity) will need to be expanded. Another significant contribution to our knowledge gap is that additional PFTs to represent the sagebrush-steppe (e.g. annual grasses such cheatgrass) are needed for EDv2.2. Regardless, this project made significant advances in PFT development and model testing. Moreover, the EDv2.2 provides a useful framework to conceptualize vegetation dynamics, project future conditions, and consider fire as a disturbance. With additional parameterizations, PFTs, and fire routines, EDv2.2 will evolve as a tool for which to better understand future ecosystem dynamics of the sagebrush-steppe.

Idaho↗

Benchmarking computational fluid dynamics models of lava flow simulation for hazard assessment, forecasting, and risk management

Numerical simulations of lava flow emplacement are valuable for assessing lava flow hazards, forecasting active flows, designing flow mitigation measures, interpreting past eruptions, and understanding the controls on lava flow behavior. Existing lava flow models vary in simplifying assumptions, physics, dimensionality, and the degree to which they have been validated against analytical solutions, experiments, and natural observations. In order to assess existing models and guide the development of new codes, we conduct a benchmarking study of computational fluid dynamics (CFD) models for lava flow emplacement, including VolcFlow, OpenFOAM, FLOW-3D, COMSOL, and MOLASSES. We model viscous, cooling, and solidifying flows over horizontal planes, sloping surfaces, and into topographic obstacles. We compare model results to physical observations made during well-controlled analogue and molten basalt experiments, and to analytical theory when available. Overall, the models accurately simulate viscous flow with some variability in flow thickness where flows intersect obstacles. OpenFOAM, COMSOL, and FLOW-3D can each reproduce experimental measurements of cooling viscous flows, and OpenFOAM and FLOW-3D simulations with temperature-dependent rheology match results from molten basalt experiments. We assess the goodness-of-fit of the simulation results and the computational cost. Our results guide the selection of numerical simulation codes for different applications, including inferring emplacement conditions of past lava flows, modeling the temporal evolution of ongoing flows during eruption, and probabilistic assessment of lava flow hazard prior to eruption. Finally, we outline potential experiments and desired key observational data from future flows that would extend existing benchmarking data sets.

Journal of Applied Volcanology↗

Soil biogeochemical responses of a tropical forest to warming and hurricane disturbance

Tropical forests represent <15% of Earths terrestrial surface yet support >50% of the planets species and play a disproportionately large role in determining climate due to the vast amounts of carbon they store and exchange with the atmosphere. Currently, disturbance patterns in tropical ecosystems are changing due to factors such as increased land use pressure and an occurrence of hurricanes. At the same time, these regions are expected to experience unprecedented warming before 2100. Despite the importance of these ecosystems for forecasting the global consequences of multiple stressors, our understanding of how projected changes in climate and disturbance will affect the biogeochemical cycling of tropical forests remains in its infancy. Until now, no studies to our knowledge have evaluated forest recovery following hurricane disturbance within the context of concurrent climatic change. Here, we present soil biogeochemical results from a tropical forest field warming experiment in Puerto Rico where, a year after experimental warming began, Hurricanes Irma and Mara greatly altered the forest, allowing a unique opportunity to explore the interacting effects of hurricane disturbance and warming. We tracked post-hurricane forest recovery for a year without warming to assess legacy effects of prior warming on the disturbance response, and then reinitiated warming treatments to further evaluate interactions between forest recovery and warmer temperatures. The data showed that warming affected multiple aspects of soil biogeochemical cycling even in the first year of treatment, with particularly large positive effects on soil microbial biomass pools (e.g., increases of 54, 43, and 46% relative to the control plots were observed for microbial biomass carbon, nitrogen, and phosphorus, respectively after 6 months of warming). We also observed significant effects of the hurricanes on soil biogeochemical cycling, as well as interactive controls of warming and disturbance. Taken together, our results showed dynamic soil responses that suggest the future of biogeochemical cycling in this tropical wet forest will be strongly shaped by the directional effects of warming and the episodic effects of hurricanes.

Puerto Rico↗

Selected micrometeorological and soil-moisture data at Amargosa Desert Research Site in Nye County near Beatty, Nevada, 1998-2000

Selected micrometeorological and soil-moisture data were collected at the Amargosa Desert Research Site adjacent to a low-level radioactive waste and hazardous chemical waste facility near Beatty, Nev., 1998-2000. Data were collected in support of ongoing research studies to improve the understanding of hydrologic and contaminant-transport processes in arid environments. Micrometeorological data include precipitation, air temperature, solar radiation, net radiation, relative humidity, ambient vapor pressure, wind speed and direction, barometric pressure, soil temperature, and soil-heat flux. All micrometeorological data were collected using a 10-second sampling interval by data loggers that output daily mean, maximum, and minimum values, and hourly mean values. For precipitation, data output consisted of daily, hourly, and 5-minute totals. Soil-moisture data included periodic measurements of soil-water content at nine neutron-probe access tubes with measurable depths ranging from 5.25 to 29.75 meters. The computer data files included in this report contain the complete micrometeorological and soil-moisture data sets. The computer data consists of seven files with about 14 megabytes of information. The seven files are in tabular format: (1) one file lists daily mean, maximum, and minimum micrometeorological data and daily total precipitation; (2) three files list hourly mean micrometeorological data and hourly precipitation for each year (1998-2000); (3) one file lists 5-minute precipitation data; (4) one file lists mean soil-water content by date and depth at four experimental sites; and (5) one file lists soil-water content by date and depth for each neutron-probe access tube. This report highlights selected data contained in the computer data files using figures, tables, and brief discussions. Instrumentation used for data collection also is described. Water-content profiles are shown to demonstrate variability of water content with depth. Time-series data are plotted to illustrate temporal variations in micrometeorological and soil-water content data. Substantial precipitation at the end of an El Ni?o cycle in early 1998 resulted in measurable water penetration to a depth of 1.25 meters at one of the four experimental soil-monitoring sites.

Nevada↗

A reproducible and reusable pipeline for segmentation of geoscientific imagery

Segmentation of Earth science imagery is an increasingly common task. Among modern techniques that use Deep Learning, the UNet architecture has been shown to be a reliable for segmenting a range of imagery. We developed software–Segmentation Gym–to implement a data-model pipeline for segmentation of scientific imagery using a family of UNet models. With an existing set of imagery and labels, the software uses a single configuration file that handles data set creation, as well as model setup and model training. Key benefits of this software are (a) the focus on reproducible data set creation and modeling, and (b) the ability for quick model experimentation through changes to a configuration file. Quick experimentation permits researchers to prototype different model architectures, sizes, and adjust common hyperparameters to find a suitable model. We demonstrate the use of the software using a data set of 419 labeled Landsat-8 scenes of coastal environments and compare results across two model architectures, five model sizes, and three loss functions. This demonstration highlights that our software enables rapid, reproducible experimentation to determine optimal hyperparameters for specific data sets and research questions.

Earth and Space Science↗

Initial results from a test of the NASA EAARL lidar in the Tampa Bay region

An initial test of the performance of the NASA Experimental Advanced Airborne Research Lidar ( EAARL ) over coastal environments around the margins of an urbanized Gulf of Mexico estuary was performed over Tampa Bay in January 2002 . The EAARL is a raster-scanning, water-penetrating, full-waveform adaptive lidar that is coupled to aircraft positioning systems and a downlooking color digital camera. The EAARL has unique capabilities for simultaneously mapping topography, shallow bathymetry, and vegetation. Initial analysis within 2 Tampa Bay subregions traversed by the survey flightlines has revealed that the EAARL can survey shallow bathymetry and variables associated with benthic cover in remarkable detail. The results of this ongoing study will aid in developing recommendations on the appropriate use of NASA EAARL surveys for mapping bathymetry and benthic habitats in estuaries around the Gulf of Mexico.

Florida↗

Current research in land, water, and agroecosystems: ASABE journals 2017 year in review

This article highlights current research into land and water resources, agroecosystems, and agricultural production systems published by the Natural Resources and Environmental Systems (NRES) community of ASABE journals (Transactions of the ASABE and Applied Engineering in Agriculture) in 2017. This article reviews the context, scope, and key results of the published articles and perhaps more importantly recommends areas for increased research attention. Experimental and modeling advances were described in hydrology, agroecosystems, climate-change effects, soil erosion, irrigation, drainage, forest resources, livestock systems, natural treatment systems, international water issues, and water quality topic areas. Three special collections were published (International Watershed Technology, Crop Modeling to Optimize Water Use, and Advances in Drainage). Other focal areas included 14 articles relating to livestock waste management, 13 concerning irrigated agricultural systems, 8 addressing climate change effects on land and water resources, and 16 on various aspects of soil erosion measurement and modeling. Building on the articles reviewed from 2017 and toward a vision of future agroecosystems research, the NRES community of ASABE journals strives to grow its role in making new knowledge accessible to sustain agricultural and natural systems in a changing world. In this vane, recommendations for future research direction are discussed with an emphasis on increased application of remote sensing data to agroecosystems research, improved assessment of agroecosystem resiliency and vulnerability to land and climate change, development of integrated models of agroecosystem services, meeting stubborn water management challenges in agricultural production systems, and focusing on publishing fully reproducible model results.

Transactions of the ASABE↗

Estimating the effects of 17α-ethinylestradiol on stochastic population growth rate of fathead minnows: a population synthesis of empirically derived vital rates

Urban freshwater streams in arid climates are wastewater effluent dominated ecosystems particularly impacted by bioactive chemicals including steroid estrogens that disrupt vertebrate reproduction. However, more understanding of the population and ecological consequences of exposure to wastewater effluent is needed. We used empirically derived vital rate estimates from a mesocosm study to develop a stochastic stage-structured population model and evaluated the effect of 17α-ethinylestradiol (EE2), the estrogen in human contraceptive pills, on fathead minnow Pimephales promelas stochastic population growth rate. Tested EE2 concentrations ranged from 3.2 to 10.9 ng L −1 and produced stochastic population growth rates (λ S ) below 1 at the lowest concentration, indicating potential for population decline. Declines in λ S compared to controls were evident in treatments that were lethal to adult males despite statistically insignificant effects on egg production and juvenile recruitment. In fact, results indicated that λ S was most sensitive to the survival of juveniles and female egg production. More broadly, our results document that population model results may differ even when empirically derived estimates of vital rates are similar among experimental treatments, and demonstrate how population models integrate and project the effects of stressors throughout the life cycle. Thus, stochastic population models can more effectively evaluate the ecological consequences of experimentally derived vital rates.

Ecotoxicology↗