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The relative influence of geographic and environmental factors on rare plant translocation outcomes

Conservation translocations are an established method for reducing the extinction risk of plant species through intentional movement within or outside the indigenous range. Unsuitable environmental conditions at translocation recipient sites and a lack of understanding of species–environment relationships are often identified as critical barriers to translocation success. However, previous syntheses have drawn these inferences from analyses of qualitative feedback rather than quantitative environmental data. In this study, we use a data set of 235 translocations conducted in the US to understand the influences of geographic and environmental factors on three metrics of translocation success: population persistence, next-generation recruitment and next-generation maturity. We use random forest models to quantify the relative importance of geographic and environmental factors that characterize dissimilarity between source and recipient locations, the position of recipient sites relative to species' ranges and niche metrics derived from these ranges. We also compare the importance of these variables with more conventional predictors (e.g. founder population size). Our results indicate that geographic and environmental variables can be as insightful as conventional variables for predicting plant translocation outcomes. The climate suitability of recipient sites, estimated using species distribution models, was the strongest relative predictor of whether a population persisted, with populations situated in more suitable climates displaying greater persistence. Next-generation recruitment and maturity were best predicted by niche metrics; species in more biotically limiting environments, including tropical regions and soils with high relative nutrient retention, as well as species with the broadest precipitation niches, were the least likely to attain these next-generation benchmarks. Synthesis and applications . Our study is one of the first to quantify the important role of spatial and climatic factors in rare plant translocation outcomes. We provide a novel geographic and environmental perspective on outcomes in plant translocations and demonstrate opportunities to improve translocation success not only by adhering to established best practice guidelines but also by integrating spatial modelling approaches into planning and management processes.

Journal of Applied Ecology

Habitat influences distribution of chronic wasting disease in white-tailed deer

Chronic wasting disease (CWD) is a transmissible spongiform encephalopathy that was first detected in 1967 in a captive research facility in Colorado. In the northeastern United States, CWD was first confirmed in white-tailed deer ( Odocoileus virginianus ) in 2005. Because CWD is a new and emerging disease with a spatial distribution that had yet to be assessed in the Northeast, we examined demographic, environmental, and spatial effects to determine how each related to this spatial distribution. The objectives of our study were to identify environmental and spatial effects that best described the spatial distribution of CWD in free-ranging white-tailed deer and identify areas that support deer that are at risk for CWD infection in the Northeast. We used Bayesian hierarchical modeling that incorporated demographic covariates, such as sex and age, along with environmental covariates, which included elevation, slope, riparian corridor, percent clay, and 3 landscapes (i.e., developed, forested, open). The model with the most support contained landscape covariates and spatial effects that represented clustering of CWD in adjacent grid cells. Forested landscapes had the strongest relationship with the distribution of CWD, with increased risk of CWD occurring in areas that had lesser amounts of forest. Our results will assist resource managers in understanding the spatial distribution of CWD within the study area, and in surrounding areas where CWD has yet to be found. Efficiency of disease surveillance and containment efforts can be improved by allocating resources used for surveillance in areas with deer populations that are at greatest risk for infection.

Journal of Wildlife Management

Causal factors for pesticide trends in streams of the United States: Atrazine and deethylatrazine

Pesticides are important for agriculture in the United States, and atrazine is one of the most widely used and widely detected pesticides in surface water. A better understanding of the mechanisms by which atrazine and its degradation product, deethylatrazine, increase and decrease in surface waters can help inform future decisions for water-quality improvement. This study considers causal factors for trends in pesticide concentration in streams in the United States and models the causal factors, other than use, in structural equation models. The structural equation models use a concomitant trend in corn and a latent variable model indicating moisture supply and management. The moisture supply and management latent variable incorporates long-term moisture conditions in the individual watersheds by using the Palmer Hydrologic Drought Index; human influence on the hydrologic cycle through the percent of the watershed drained by tile drains in 2012; and the base-flow contribution to streamflow, using the base-flow index. The structural equation models explain 77% and 38% of the variability in atrazine and deethylatrazine trends, respectively, across the conterminous United States. The models highlight future water-quality challenges, particularly in tile-drained settings where fall precipitation and heavy precipitation are increasing.

Journal of Environmental Quality

FORUM: Effective management of ecological resilience – are we there yet?

Ecological resilience is developing into a credible paradigm for policy development and environmental management for preserving natural capital in a rapidly changing world. However, resilience emerges from complex interactions, limiting the translation of theory into practice. Main limitations include the following: (i) difficulty in quantification and detection of changes in ecological resilience, (ii) a lack of empirical evidence to support preventative or proactive management and (iii) difficulties in managing processes operating across socio-ecological systems that vary in space and time. We highlight recent research with the potential to address these limitations including new and/or improved indicators of resilience and tools to assess scale as a driver of resilience. Synthesis and applications . Effective resilience-based management must be adaptive in nature. To support this, we propose an operational model using resilience-based iterative management actions operating across scales.

Journal of Applied Ecology

Adapting standardized trout monitoring to a changing climate for the upper Yellowstone River, Montana, USA

Objective Long‐term standardized monitoring programs are fundamental to assessing how fish populations respond to anthropogenic stressors. Standardized monitoring programs may need to adopt new methods to adapt to rapid environmental changes that are associated with a changing climate. In the upper Yellowstone River, Montana, biologists have used a standardized, mark–recapture monitoring protocol to annually estimate the abundance of trout since 1978 to assess population status and trends. However, within the past two decades, climate change has caused changes in discharge timing that have prevented standardized monitoring from occurring annually. Methods We investigated the feasibility of using two analytical methods, N‐mixture models and mean capture probability, for estimating the abundance of three trout species in the upper Yellowstone River using the historical long‐term data set; these methods allow abundance to be estimated when a mark–recapture estimate cannot be obtained due to hydrologic conditions. Result When compared with abundance estimates from mark–recapture methods, N‐mixture models most often resulted in negatively biased abundance estimates, whereas mean capture probability analyses resulted in positively biased abundance estimates. Additionally, N‐mixture models produced negatively biased estimates when tested against true abundance values from simulated data sets. The bias in the N‐mixture model estimates was caused by poor model fit and variation in capture probability. The bias in the mean capture probability estimates was caused by heterogeneity in capture probability, likely caused by variable environmental conditions, which were not accounted for in the models. Conclusion N‐mixture models and mean capture probability are not viable alternatives for estimating abundance in the upper Yellowstone River. Thus, exploring additional adaptations to sampling methodologies and analytical approaches, including models that require individually marked fish, will be valuable for this system. Climate change will undoubtedly necessitate changes to standardized sampling methods throughout the world; thus, developing alternative sampling and analytical methods will be important for maintaining the utility of long‐term data sets.

Montana

Effects of gill-net trauma, barotrauma, and deep release on postrelease mortality of Lake Trout

Unaccounted postrelease mortality violates assumptions of many fisheries studies, thereby biasing parameter estimates and reducing efficiency. We evaluated effects of gill-net trauma, barotrauma, and deep-release treatment on postrelease mortality of lake trout Salvelinus namaycush . Lake trout were captured at depths up to 65 m with gill nets in Priest Lake, Idaho, and held in a large enclosure for 10–12 d. Postrelease mortality was the same for surface-release–and deep-release–treated fish (41%). Mixed-effects logistic regression models were used to evaluate effects of intrinsic and environmental factors on the probability of mortality. Presence of gill-net trauma and degree of barotrauma were associated with increased probability of postrelease mortality. Smaller fish were also more likely to suffer postrelease mortality. On average, deep-release treatment did not reduce postrelease mortality, but effectiveness of treatment increased with fish length. Of the environmental factors evaluated, only elapsed time between lifting the first and last anchors of a gill-net gang (i.e., lift time) was significantly related to postrelease mortality. Longer lift times, which may allow ascending lake trout to acclimate to depressurization, were associated with lower postrelease mortality rates. Our study suggests that postrelease mortality may be higher than previously assumed for lake trout because mortality continues after 48 h. In future studies, postrelease mortality could be reduced by increasing gill-net lift times and increasing mesh size used to increase length of fish captured.

Idaho

Looking where it’s hard to see: A case study documenting rare Eucyclogobius newberryi presence in a California lagoon

Environmental DNA (eDNA) analysis is increasingly used for biomonitoring and research of fish populations and communities by environmental resource managers and academic researchers. Although managers are much interested in expanding the use of eDNA as a survey technique, they are sceptical about both its utility (given that information is often limited to presence/absence of a species) and feasibility (given the need for proper laboratory facilities for sample processing). Nonetheless, under the right circumstances, eDNA analysis is cost‐effective compared to many traditional aquatic survey methods and does not disturb habitat or harm the animals being surveyed. This article presents a case study in which eDNA analysis was successfully used to document the presence of a rare fish species in a waterway earmarked for restoration. The authors discuss the conditions that allowed this study to occur quickly and smoothly and speculate on how the goals of researchers and managers can be integrated for efficient and informative use of this tool.

California

Multinomial N-mixture models improve the applicability of electrofishing for developing population estimates of stream-dwelling Smallmouth Bass

Failure to account for variable detection across survey conditions constrains progressive stream ecology and can lead to erroneous stream fish management and conservation decisions. In addition to variable detection’s confounding long-term stream fish population trends, reliable abundance estimates across a wide range of survey conditions are fundamental to establishing species–environment relationships. Despite major advancements in accounting for variable detection when surveying animal populations, these approaches remain largely ignored by stream fish scientists, and CPUE remains the most common metric used by researchers and managers. One notable advancement for addressing the challenges of variable detection is the multinomial N -mixture model. Multinomial N -mixture models use a flexible hierarchical framework to model the detection process across sites as a function of covariates; they also accommodate common fisheries survey methods, such as removal and capture–recapture. Effective monitoring of stream-dwelling Smallmouth Bass Micropterus dolomieu populations has long been challenging; therefore, our objective was to examine the use of multinomial N -mixture models to improve the applicability of electrofishing for estimating absolute abundance. We sampled Smallmouth Bass populations by using tow-barge electrofishing across a range of environmental conditions in streams of the Ozark Highlands ecoregion. Using an information-theoretic approach, we identified effort, water clarity, wetted channel width, and water depth as covariates that were related to variable Smallmouth Bass electrofishing detection. Smallmouth Bass abundance estimates derived from our top model consistently agreed with baseline estimates obtained via snorkel surveys. Additionally, confidence intervals from the multinomial N -mixture models were consistently more precise than those of unbiased Petersen capture–recapture estimates due to the dependency among data sets in the hierarchical framework. We demonstrate the application of this contemporary population estimation method to address a longstanding stream fish management issue. We also detail the advantages and trade-offs of hierarchical population estimation methods relative to CPUE and estimation methods that model each site separately.

Missouri, Oklahoma

Evaluating spawning migration patterns and predicting spawning success of shovelnose sturgeon in the Lower Missouri River

Approaches using telemetry, precise reproductive assessments, and surgically implanted data storage tags (DSTs) were used in combination with novel applications of analytical techniques for fish movement studies to describe patterns in migratory behavior and predict spawning success of gravid shovelnose sturgeon. From 2004 to 2007, over 300 gravid female shovelnose sturgeon ( Scaphirhynchus platorynchus ) from the Lower Missouri River, that were expected to spawn in the year they were collected, were surgically implanted with transmitters and archival DSTs. Functional cluster modeling of telemetry data from the spawning season suggested two common migration patterns of gravid female shovelnose sturgeon. Fish implanted from 958 to 1181 river kilometer (rkm) from the mouth of the Missouri River (or northern portion of the Lower Missouri River within 354 rkm of the lowest Missouri River dam at rkm 1305) had one migration pattern. Of fish implanted from 209 to 402 rkm from the mouth of the Missouri River (or southern portion of the Lower Missouri River), half demonstrated a movement pattern similar to the northern fish while the other half demonstrated a migration pattern that covered more of the river. There was no apparent difference in migration patterns between successful and unsuccessful spawners. Multiple hypotheses exist to explain differences in migratory patterns among fish from different river reaches. Additional work is required to determine if observed differences are due to multiple adapted strategies, environmental alteration, and/or initial tagging date. Hierarchical Bayesian modeling of DST data indicated that variation in depth usage patterns was consistently different between successful and unsuccessful spawners, as indicated by differences in likelihood of switching between high and low variability states. Analyses of DST data, and data collected at capture, were sufficient to predict 8 of 10 non‐spawners/incomplete spawners and all 30 spawners in the absence of telemetry location data. Together, the results of these two separate analyses suggest that caution is necessary in extrapolating spawning success from broad‐scale movement data alone. More direct measures of spawning success may be necessary to precisely determine spawning success and to evaluate the effects of management actions.

Iowa, Missouri, Nebraska

Capture of environmental DNA (eDNA) from water samples by flocculation

The analysis of environmental DNA (eDNA) has become a widely used approach to problem solving in species management. The detection of cryptic species including invasive and (or) species at risk is the goal, typically accomplished by testing water and sediment for the presence of characteristic DNA signatures. Reliable and efficient procedures for the capture of eDNA are required, especially those that can be performed easily in the field by personnel with limited training and citizen scientists. The capture of eDNA using membrane filtration is widely used currently. This approach has inherent issues that include the choice of filter material and porosity, filter fouling, and time required on site for the process to be performed. Flocculation offers an alternative that can be easily implemented and applied to sampling regimes that strive to cover broad territories in limited time.

JOVE Journal Of Visualized Experiments

Investigating impacts of oil and gas development on greater sage-grouse

The sagebrush ( Artemisia spp.) ecosystem is one of the largest ecosystems in western North America providing habitat for species found nowhere else. Sagebrush habitats have experienced dramatic declines since the 1950s, mostly due to anthropogenic disturbances. The greater sage-grouse ( Centrocercus urophasianus ) is a sagebrush-obligate species that has experienced population declines over the last several decades, which are attributed to a variety of disturbances including the more recent threat of oil and gas development. We developed a hierarchical, Bayesian state-space model to investigate the impacts of 2 measures of oil and gas development, and environmental and habitat conditions, on sage-grouse populations in Wyoming, USA using male lek counts from 1984 to 2008. Lek attendance of male sage-grouse declined by approximately 2.5%/year and was negatively related to oil and gas well density. We found little support for the influence of sagebrush cover and precipitation on changes in lek counts. Our results support those of other studies reporting negative impacts of oil and gas development on sage-grouse populations and our modeling approach allowed us to make inference to a longer time scale and larger spatial extent than in previous studies. In addition to sage-grouse, development may also negatively affect other sagebrush-obligate species, and active management of sagebrush habitats may be necessary to maintain some species.

Wyoming

Determinants of public support for threatened and endangered species management: A case study of Cape Lookout National Seashore

Gaining public support for management actions is important to the success of public land management agencies' efforts to protect threatened and endangered species. This is especially relevant at national parks, where managers balance two aspects of their conservation mission: to protect resources and to provide for public enjoyment. This study examined variables potentially associated with support for management actions at Cape Lookout National Seashore, a unit of the National Park Service. Two visitor surveys were conducted at the park at different seasons, and a resident survey was conducted for households in Carteret County, North Carolina, where the park is located. The goal of the project was to provide park managers with information that may help with the development of communication strategies concerning the park's conservation mission. These communication strategies may help to facilitate mutual understanding and garner public support for management actions. Several variables were examined as potential determinants that park managers ought to consider when developing communication strategies. Multinomial logistic regression was applied to examine the relationships between these variables and the likelihood of support for or opposition to management actions. The variables examined included perceived shared values of park resources, general environmental attitudes, level of familiarity with park resources and regulations, knowledge about threatened and endangered species, level of trust in the decision-making process, and perceived shared values with park management. In addition, demographic variables such as income level, respondent age, residency status, and visitor type were also used. The results show that perceived values of threatened and endangered species, trust in park managers and the decision-making process, and perceived share values with park managers were among the strongest indicators of support for management actions. Different user groups also exhibited different levels of support, with groups engaged in specialized recreation activities (fishers) being the most likely to oppose management actions. While our findings are not surprising, they corroborate past research that has shown an effective communications strategy should be customized to target different audiences. In addition, management should focus on developing long-term relationships that build trust in and foster credibility of decision-making processes.

North Carolina

Sampling the stream landscape: Improving the applicability of an ecoregion-level capture probability model for stream fishes

Temporal and spatial variability in streams result in heterogeneous gear capture probability (i.e., the proportion of available individuals identified) that confounds interpretation of data used to monitor fish abundance. We modeled tow-barge electrofishing capture probability at multiple spatial scales for nine Ozark Highland stream fishes. In addition to fish size, we identified seven reach-scale environmental characteristics associated with variable capture probability: stream discharge, water depth, conductivity, water clarity, emergent vegetation, wetted width–depth ratio, and proportion of riffle habitat. The magnitude of the relationship between capture probability and both discharge and depth varied among stream fishes. We also identified lithological characteristics among stream segments as a coarse-scale source of variable capture probability. The resulting capture probability model can be used to adjust catch data and derive reach-scale absolute abundance estimates across a wide range of sampling conditions with similar effort as used in more traditional fisheries surveys (i.e., catch per unit effort). Adjusting catch data based on variable capture probability improves the comparability of data sets, thus promoting both well-informed conservation and management decisions and advances in stream-fish ecology.

Arkansas, Missouri, Oklahoma

Abiotic and biotic factors related to growth of non-native Walleyes in Lake Pend Oreille, Idaho

Objective Growth is one of the primary drivers of fish population dynamics and understanding factors influencing growth is vital to effective management of fish populations. This study investigated potential factors influencing growth of a recently established, non-native population of Walleye Sander vitreus in the Lake Pend Oreille system in northern Idaho. Methods We used relative growth index to describe growth of Walleyes relative to populations across North America. Mixed‐effects modeling was used to relate growth to abiotic (i.e., mean summer water temperature, river inflow) and biotic (i.e., kokanee Oncorhynchus nerka abundance and biomass; opossum shrimp Mysis diluviana density) variables. Models were ranked using Akaike's information criterion corrected for small sample size. Individual variability in growth was related to diet represented by stable isotopes (i.e., δ 15 N, δ 13 C) using linear regression for age‐1, age‐2, age‐3, and age‐5 individuals. Subsequently, for each age‐class, we evaluated differences in δ 15 N and δ 13 C between fast‐growing (i.e., 75th and higher percentiles of growth) and slow‐growing (i.e., 25th and lower percentiles of growth) individuals. Results The relative growth index suggested that Walleye grew fast relative to other populations, particularly those at similar latitudes to the Lake Pend Oreille system. Mixed-effects regression modeling indicated that growth of Walleyes was positively associated with temperature as well as abundance and biomass of kokanee; growth was negatively associated with inflow from the Clark Fork River and Mysis diluviana density. The top model explaining growth of Walleyes contained temperature and abundance of kokanee as environmental variables. The second equally plausible (i.e., within 2 AICc) model contained temperature. Growth of Walleyes varied among individuals. Generally, fast-growing Walleyes had higher δ15N than slow-growing Walleyes. Similarly, δ13C was more depleted in the fast-growing individuals for all age classes, except age 1, suggesting that age-1 individuals used higher proportions of littoral prey items compared to other age classes. Conclusion This study showed that kokanee abundance and temperature appeared to be important factors influencing growth of Walleyes in the Lake Pend Oreille system. Additionally, variability in growth appeared to be related to variability in diet, particularly for age-1 Walleyes. Impact statement Growth of Walleyes has been extensively studied, yet few studies have evaluated growth of Walleyes in novel systems or assessed individual variability in growth. Our research adds to the understanding of individual variability in growth and factors influencing population dynamics of non-native Walleyes.

Idaho

Environmental metal residues in tissues of canvasbacks

Reduction and deterioration of habitat and high nest predation have contributed to the decline of the continental populations of canvasbacks (Aythya valisineria) (Trauger 1974). Environmental metal contaminants also may adversely affect reproduction and survival of waterfowl (Heinz 1974, 1976a,b, 1979; Finley and Stendell 1978). White et al. (1979) ex- amined canvasbacks from Chesapeake Bay in 1975 and 1976 and found low levels of lead, cadmium, and mercury in certain tissues. Low levels of mercury in canvasbacks have also been reported from Wisconsin (Kleinert and Degurse 1972) and Saskatchewan (Vermeer and Armstrong 1972). Stendell et al. (1977) found mercury residues in 6 of 34 canvasback eggs collected in 1972 and 1973. The objective of my study was to ascertain levels of mercury, lead, cadmium, and nickel in canvasbacks from the upper Mississippi River

Journal of Wildlife Management

Life history diversity of Snake River finespotted cutthroat trout: managing for persistence in a rapidly changing environment

Over the last century, native trout have experienced dramatic population declines, particularly in larger river systems where habitats associated with different spawning life history forms have been lost through habitat degradation and fragmentation. The resulting decrease in life history diversity has affected the capacity of populations to respond to environmental variability and disturbance. Unfortunately, because few large rivers are intact enough to permit full expression of life history diversity, it is unclear what patterns of diversity should be a conservation target. In this study, radiotelemetry was used to identify spawning and migration patterns of Snake River Finespotted Cutthroat Trout Oncorhynchus clarkii behnkei in the upper Snake River. Individuals were implanted with radio tags in October 2007 and 2008, and monitored through October 2009. Radio-tagged cutthroat trout in the upper Snake River exhibited variation in spawning habitat type and location, migration distance, spawn timing, postspawning behavior, and susceptibility to mortality sources. Between May and July, Cutthroat Trout spawned in runoff-dominated tributaries, groundwater-dominated spring creeks, and side channels of the Snake River. Individuals migrated up to 101 km from tagging locations in the upper Snake River to access spawning habitats, indicating that the upper Snake River provided seasonal habitat for spawners originating throughout the watershed. Postspawning behavior also varied; by August each year, 28% of spring-creek spawners remained in their spawning location, compared with 0% of side-channel spawners and 7% of tributary spawners. These spawning and migration patterns reflect the connectivity, habitat diversity, and dynamic template of the Snake River. Ultimately, promoting life history diversity through restoration of complex habitats may provide the most opportunities for cutthroat trout persistence in an environment likely to experience increased variability from climate change and disturbance from invasive species.

Wyoming

The automated reference toolset: A soil-geomorphic ecological potential matching algorithm

Ecological inventory and monitoring data need referential context for interpretation. Identification of appropriate reference areas of similar ecological potential for site comparison is demonstrated using a newly developed automated reference toolset (ART). Foundational to identification of reference areas was a soil map of particle size in the control section (PSCS), a theme in US Soil Taxonomy. A 30-m resolution PSCS map of the Colorado Plateau (366,000 km 2 ) was created by interpolating ∼5000 field soil observations using a random forest model and a suite of raster environmental spatial layers representing topography, climate, general ecological community, and satellite imagery ratios. The PSCS map had overall out of bag accuracy of 61.8% (Kappa of 0.54, p < 0.0001), and an independent validation accuracy of 93.2% at a set of 356 field plots along the southern edge of Canyonlands National Park, Utah. The ART process was also tested at these plots, and matched plots with the same ecological sites (ESs) 67% of the time where sites fell within 2-km buffers of each other. These results show that the PSCS and ART have strong application for ecological monitoring and sampling design, as well as assessing impacts of disturbance and land management action using an ecological potential framework. Results also demonstrate that PSCS could be a key mapping layer for the USDA-NRCS provisional ES development initiative.

Soil Science Society of America Journal

Variability in vegetation effects on density and nesting success of grassland birds

The structure of vegetation in grassland systems, unlike that in forest systems, varies dramatically among years on the same sites, and among regions with similar vegetation. The role of this variation in vegetation structure on bird density and nesting success of grassland birds is poorly understood, primarily because few studies have included sufficiently large temporal and spatial scales to capture the variation in vegetation structure, bird density, or nesting success. To date, no large-scale study on grassland birds has been conducted to investigate whether grassland bird density and nesting success respond similarly to changes in vegetation structure. However, reliable management recommendations require investigations into the distribution and nesting success of grassland birds over larger temporal and spatial scales. In addition, studies need to examine whether bird density and nesting success respond similarly to changing environmental conditions. We investigated the effect of vegetation structure on the density and nesting success of 3 grassland-nesting birds: clay-colored sparrow (Spizella pallida), Savannah sparrow (Passerculus sandwichensis), and bobolink (Dolichonyx oryzivorus) in 3 regions of the northern tallgrass prairie in 1998-2001. Few vegetation features influenced the densities of our study species, and each species responded differently to those vegetation variables. We could identify only 1 variable that clearly influenced nesting success of 1 species: clay-colored sparrow nesting success increased with increasing percentage of nest cover from the surrounding vegetation. Because responses of avian density and nesting success to vegetation measures varied among regions, years, and species, land managers at all times need to provide grasslands with different types of vegetation structure. Management guidelines developed from small-scale, short-term studies may lead to misrepresentations of the needs of grassland-nesting birds.

Journal of Wildlife Management