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Research about San Francisco Bay

Source-linked reports with geographic coverage including San Francisco Bay.

At least 217 records · Page 12Linked to original sources
USGS2002

Supporting data for hydrologic studies in San Francisco Bay, California: Meteorological measurements at the Port of Redwood City during 1998-2001

Meteorological data were collected during 1998-2001 at the Port of Redwood City, California, to support hydrologic studies in South San Francisco Bay. The measured meteorological variables were air temperature, atmospheric pressure, quantum flux (insolation), and four parameters of wind speed and direction: scalar mean horizontal wind speed, (vector) resultant horizontal wind speed, resultant wind direction, and standard deviation of the wind direction. Hourly mean values based on measurements at five-minute intervals were logged at the site. Daily mean values were computed for temperature, infolation, pressure, and scalar wind speed. Daily mean values for 1998-2001 are described in this report, and a short record of hourly mean values is compared to data from another near-by station. Data (hourly and daily mean) from the entire period of record (starting in April 1992) and reports describing data prior to 1998 are provided.

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USGS2002

Near field receiving water monitoring of benthic community near the Palo Alto Water Quality Control Plant in south San Francisco Bay: February 1974 through December 2000

Analyses of the benthic community structure over a 26-year period show that changes in the community have occurred concurrent with reduced concentrations of metals in the sediment and in the tissues of the biosentinal clam Macoma balthica from the same area. The community has shifted from being dominated by several opportunistic species to a community where the species are more similar in abundance, a pattern that could be indicative of a more stable community that is subjected to less stress. In addition, two of the opportunistic species (Ampelisca abdita and Streblospio benedicti) that brood their young and live on the surface of the sediment in tubes have shown a continual decline in dominance coincident with the decline in metals. Heteromastus filiformis, a subsurface polychaete worm that lives in the sediment, consumes sediment and organic particles residing in the sediment, and reproduces by laying their eggs on or in the sediment has shown a concurrent increase in dominance. These changes in species dominance reflect a change in the community from one dominated by surface dwelling, brooding species to one with species with varying life history characteristics. Analysis of the reproductive activity of Macoma balthica shows increases in reproductive activity concurrent with the decline in metal concentrations in the tissue of this organism. Reproductive activity is presently stable with almost all animals reproducing during the two reproductive seasons (spring and fall) of most years.

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USGS2002

Water level, specific conductance, and water temperature data, San Francisco Bay, California, for Water Year 2000

Time series of water-level, specific-conductance, and watertemperature data were collected at seven sites in San Francisco Bay during water year 2000 (October 1, 1999 through September 30, 2000). Water-level data were recorded only at Point San Pablo. Specific-conductance and water-temperature data were recorded at 15-minute intervals at the following locations (Figure 1): • Carquinez Strait at Carquinez Bridge • Napa River at Mare Island Causeway near Vallejo • San Pablo Bay at Petaluma River Channel Marker 9 • San Pablo Strait at Point San Pablo • Central San Francisco Bay at Presidio Military Reservation • Central San Francisco Bay at Pier 24 • South San Francisco Bay at San Mateo Bridge near Foster City.

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USGS2001

Secondary currents in a curved, stratified, estuarine channel

This paper presents a study of secondary circulation in a curved stratified channel in northern San Francisco Bay over a 12.5-hour tidal cycle. Secondary currents were strong at times (varying by up to 35 cm/s from top to bottom) but relatively transient, as the balance between centrifugal and lateral baroclinic forcing changed over time. The short travel time around the bend did not allow a steady state balance to develop between centrifugal and lateral baroclinic forcing. During the flood tide the confluence of two streams with different velocities produced a strong lateral gradient in streamwise velocity. As a result, lateral advection was a significant term in the streamwise momentum balance, having the same order of magnitude as the barotropic and baroclinic pressure gradients, and the frictional terms. During the first part of the ebb, secondary currents were induced by lateral baroclinic forcing. The direction of the secondary circulation reversed later in the ebb, as the baroclinic forcing became weaker than the centrifugal acceleration. The gradient Richardson number showed that stratification was stable over most of the tidal cycle, decreasing the importance of friction and allowing secondary currents to persist.

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USGS2001

Benthic flux of dissolved nickel into the water column of south San Francisco Bay

Field and laboratory studies were conducted between April, 1998 and May, 1999 to provide the first direct measurements of the benthic flux of dissolved (0.2-micron filtered) nickel between the bottom sediment and water column at three sites in the southern component of San Francisco Bay (South Bay), California. Dissolved nickel and predominant ligands (represented by dissolved organic carbon, and sulfides) were the solutes of primary interest, although a variety of ancillary measurements were also performed to provide a framework for interpretation. Results described herein integrate information needs identified by the State Water Resources Control Board and local stakeholders with fundamental research associated with the U.S. Geological Survey Toxic Substances Hydrology Program. Dissolved-Ni concentrations in the bottom water over the three sampling dates ranged from 34 to 43 nanomoles per liter. Dissolved-macronutrient concentrations in the bottom water were consistently higher (frequently by orders of magnitude) than surface-water determinations reported for similar times and locations (Regional Monitoring Program, 2001). This is consistent with measured positive benthic fluxes for the macronutrients. Benthic-flux estimates for dissolved nickel from core-incubations, when areally averaged over the South Bay, were significant (that is, of equivalent or greater order of magnitude) relative to previously reported freshwater point and non-point sources. This observation is consistent with previous determinations for other metals, and with the potential remobilization of sediment-associated metals that have been ubiquitously distributed in the South Bay. Similar to dissolved-nickel results, benthic flux of macronutrients was also consistently significant relative to surface-water inputs. These results add to a growing body of knowledge that strongly suggests a need to consider contaminant transport across the sediment-water interface when establishing future management strategies for the watershed.

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USGS2001

Time series of suspended-solids concentration, salinity, temperature, and total mercury concentration in San Francisco Bay during water year 1998

Many physical processes affect how constituents within San Francisco Bay vary. Processes and their associated time scales include turbulence (seconds), semidiurnal and diurnal tides (hours), the spring-neap tidal cycle (days), freshwater flow (weeks), seasonal winds (months), ecological and climatic changes (years), and geologic changes (thousands of years). Continuous time series of data on basic state variables of the bay, such as suspended-solids concentration (SSC), salinity, and water temperature, provide insight on the effect and relative importance of physical processes on the bay. SSC time series and Regional Monitoring Program (RMP) water-quality data can be used to calculate time series of some traceelement concentrations (Schoellhamer, 1997a, 1997b). The purpose of this chapter is to describe qualitatively time series of SSC, salinity, water temperature, and mercury during water year 1998 (October 1997 through September 1998). Salinity, temperature, and sediment are important components of the San Francisco Bay estuarine system. Salinity and temperature affect the hydrodynamics (Monismith et al., 1996; Schoellhamer and Burau, 1998), geochemistry (Kuwabara et al., 1989), and ecology (Cloern, 1984; Nichols et al., 1986; Jassby et al., 1995) of the bay. Suspended sediments limit light availability in the bay, which, in turn, limits primary production (Cloern, 1987; Cole and Cloern, 1987), and thus food for higher trophic levels. Sediments deposit in ports and shipping channels, which must be dredged to maintain navigation (U.S. Environmental Protection Agency, 1992). Potentially toxic substances, such as metals and pesticides, adsorb to sediment particles (Kuwabara et al., 1989; Domagalski and Kuivila, 1993; Flegal et al., 1996; Schoellhamer, 1997a, 1997b). The transport and fate of suspended sediments are important factors in determining the transport and fate of constituents adsorbed on the sediments. For example, the concentration of suspended particulate chromium in the bay appears to be controlled primarily by sediment resuspension (Abu-Saba and Flegal, 1995). Concentrations of dissolved trace elements are greater in South Bay than elsewhere in San Francisco Bay, and bottom sediments are believed to be a significant source (Flegal et al., 1991). The sediments on the bay bottom provide habitat for benthic communities that can ingest these substances and introduce them into the food web (Luoma et al., 1985; Brown and Luoma, 1995, Luoma 1996). Bottom sediments also are a reservoir of nutrients that contribute to the maintenance of estuarine productivity (Hammond et al., 1985).

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USGS2000

Slip rates on San Francisco Bay area faults from anelastic deformation of the continental lithosphere

Long-term slip rates on major faults in the San Francisco Bay area are predicted by modeling the anelastic deformation of the continental lithosphere in response to regional relative plate motion. The model developed by Bird and Kong [1994] is used to simulate lithospheric deformation according to a Coulomb frictional rheology of the upper crust and a dislocation creep rheology at depth. The focus of this study is the long-term motion of faults in a region extending from the creeping section of the San Andreas fault to the south up to the latitude of Cape Mendocino to the north. Boundary conditions are specified by the relative motion between the Pacific plate and the Sierra Nevada-Great Valley microplate [ Argus and Gordon , 2000]. Rheologic-frictional parameters are specified as independent variables, and prediction errors are calculated with respect to geologic estimates of slip rates and maximum compressive stress directions. The model that best explains the region-wide observations is one in which the coefficient of friction on all of the major faults is less than 0.15, with the coefficient of friction for the San Andreas fault being approximately 0.09, consistent with previous inferences of San Andreas fault friction. Prediction error increases with lower fault friction on the San Andreas, indicating a lower bound of μSAF > 0.08. Discrepancies with respect to previous slip rate estimates include a higher than expected slip rate along the peninsula segment of the San Andreas fault and a slightly lower than expected slip rate along the San Gregorio fault.

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USGS2000

Linkage of bioaccumulation and biological effects to changes in pollutant loads in south San Francisco Bay

The developed world has invested billions of dollars in waste treatment since the 1970s; however, changes in ecological or biological responses are rarely associated with reductions in metal pollutants. Here we present a novel, 23-yr time series of environmental change from a San Francisco Bay mudflat located 1 km from the discharge of a suburban domestic sewage treatment plant. Samples of surface sediment, the bioindicator Macoma balthica , and metals loading data were used to establish links between discharge, bioaccumulation, and effects. Mean annual Ag concentrations in M. balthica were 106 μg/g in 1978 and 3.67 μg/g in 1998. Concentrations of Cu declined from 287 μg/g in 1980 to a minimum of 24 μg/g in 1991. Declining Cu bioaccumulation was strongly correlated with decreasing Cu loads from the plant between 1977 and 1998. Relationships with bioaccumulation and total annual precipitation suggested that inputs from nonpoint sources were most important in controlling Zn bioavailability during the same period. Ecoepidemiological criteria were used to associate failed gamete production in M. balthica to a metals-enriched environment. Reproduction persistently failed between the mid-1970s and mid-1980s; it recovered after metal contamination declined. Other potential environmental causes such as food availability, sediment chemistry, or seasonal salinity fluctuations were not related to the timing of the change in reproductive capability. The results establish an associative link, suggesting that it is important to further investigate the chemical interference of Cu and/or Ag with invertebrate reproduction at relatively moderate levels of environmental contamination.

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USGS2000

Influence of salinity, bottom topography, and tides on locations of estuarine turbidity maxima in northern San Francisco Bay

Time series of salinity and suspended-solids concentration measured at four locations and vertical profiles of salinity and suspended-solids concentration measured during 48 water-quality cruises from January 1993 to September 1997 are analyzed to describe the influence of salinity, bottom topography, and tides on locations of estuarine turbidity maxima in northern San Francisco Bay, California. Estuarine turbidity maxima form when salinity is present but they are not associated with a singular salinity. Bottom topography enhances salinity stratification, gravitational circulation and estuarine turbidity maxima formation seaward of sills. The spring/neap tidal cycle affects locations of estuarine turbidity maxima. Salinity stratification in Carquinez Strait, which is seaward of a sill, is greatest during neap tides, which is the only time when tidally averaged suspended-solids concentration in Carquinez Strait was less than that observed landward at Mallard Island. Spring tides cause the greatest vertical mixing and suspended-solids concentration in Carquinez Strait. Therefore, surface estuarine turbidity maxima always were located in or near the Strait (seaward of Middle Ground) during spring tide cruises, regardless of salinity. During neap tides, surface estuarine turbidity maxima always were observed in the landward half of the study area (landward of Middle Ground) and between 0–2 practical salinity units.

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USGS2000

High-resolution marine seismic reflection data from the San Francisco Bay area

Between 1993 and 1997, the U.S. Geological Survey acquired high-resolution, marine seismic-reflection profile data across submerged portions of known and inferred upper crustal fault zones throughout the greater San Francisco Bay area. Surveys were conducted oversouth San Francisco Bay in the vicinity of the San Bruno shoal (roughly between the San Francisco and Oakland airports), over the offshore extension of the San Andreas fault system west of the Golden Gate, over the Hayward fault to Rodgers Creek fault step-over in San Pablo Bay, and over the Kirby Hills fault where it crosses the western Sacramento Delta. Reconnaissance profiles were acquired elsewhere throughout the San Francisco and San Pablo Bays. These data were acquired by the U.S. Geological Survey, Western Coastal and Marine Geology Team, under the auspices of the Central California/San Francisco Bay Earthquake Hazards Project. Analysis and interpretation of some of these profiles has been published by Marlow and others (1996, 1999). Further analysis and interpretation of these data are available in a USGS. Professional Paper Crustal Structure of the Coastal and Marine San Francisco Bay Region, T. Parsons, editor, http://geopubs.wr.usgs.gov/prof-paper/pp1658/ [link added 2012 mfd].

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USGS2000

Spawning, fertilization, and larval development of Potamocorbula amurensis (Mollusca: Bivalvia) from San Francisco Bay, California

In Potamocorbula amurensis time for development to the straight-hinge larval stage is 48 hr at 15°C. Potamocorbula amurensis settles at a shell length of approximately 135 um 17 to 19 days after fertilization. Our observations of timing of larval development in P. amurensis support the hypothesis of earlier workers that its route of initial introduction to San Francisco Bay was as ve1iger larvae transported in ballast water by trans-Pacific cargo ships. The length of the larval period of P. amurensis relative to water mass residence times in San Francisco Bay suggests that it is sufficient to allow substantial dispersal from North Bay to South Bay populations in concordance with previous observations that genetic differentiation among populations of P. amurensis in San Francisco Bay is low. Potamocorbula amurensis is markedly euryhaline at all stages of development. Spawning and fertilization can occur at salinities from 5 to 25 psu, and eggs and sperm can each tolerate at least a lO-psu step increase or decrease in salinity. Embyros that are 2 hr old can tolerate salinities from 10 to 30 psu, and by the time they are 24 hr old they can tolerate the same range of salinities (2 to 30 psu) that adult clams can. The ability of P. amurensis larvae to tolerate substantial step changes in salinity suggests a strong potential to survive incomplete oceanic exchanges of ballast water and subsequent discharge into receiving waters across a broad range of salinities.

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USGS2000

How useful is landslide hazard information? Lessons learned in the San Francisco Bay region

Landslides, worldwide and in the United States, are arguably the most costly natural hazard. Substantial landslide information is available, but much of it remains underutilized, as a disconnect exists among geologists, decision makers, and the public. The lack of a national landslide insurance policy exacerbates this situation and promotes litigation as the principal recourse for recouping landslide-damage losses. The U.S. Geological Survey's landslide investigation in the San Francisco Bay region of California provides a context for making suggestions on how Earth science information could be used more effectively.

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USGS1999

Simulation of scenario earthquake influenced field by using GIS

The method for estimating the site effect on ground motion specified by Borcherdt (1994a, 1994b) is briefly introduced in the paper. This method and the detail geological data and site classification data in San Francisco bay area of California, the United States, are applied to simulate the influenced field of scenario earthquake by GIS technology, and the software for simulating has been drawn up. The paper is a partial result of cooperative research project between China Seismological Bureau and US Geological Survey.

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USGS1999

Enhancement of PAHs in estuarine invertebrates by surface runoff at a decommissioned military fuel depot

Accumulation of polycyclic aromatic hydrocarbons (PAHs) was determined in blue mussels ( Mytilus spp.) and shore crabs ( Hemigrapsus sp.) at a recently closed military fuel depot in central San Francisco Bay, California. In April 1996, during a period of above average precipitation, specimens were collected at the depot, near the depot, and at sites 10 and 20 km south of the depot. Four weeks after the rains ended, blue mussels were again collected at the depot, and at two additional sites in the central Bay region. In April, total PAHs in mussels from the depot were significantly higher only than that in mussels collected 20 km from the depot; however, seven specific, substituted PAHs were higher at the depot than at all other sites. In June, only two of the 38 PAHs common in mussels in April were detected at the depot; these concentrations were comparable to ambient concentrations in mussels at the Bay. It seemed that bioavailability of PAHs at the depot was enhanced by rainfall, probably due to the mobilization of PAHs via groundwater into the Bay. Concentrations in mussels from chronically contaminated sites were about five times higher than mussels collected from the depot. Low PAH concentrations were detected in shore crabs near the depot, and the highest levels were not associated with the depot. Observed PAH concentrations are discussed in relation to upper trophic organisms.

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