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Geology topics

Travis S. Schmidt

Publications and source records attributed to Travis S. Schmidt.

At least 19 recordsLinked to original sources
USGS2026

Effect of rotenone treatment on alpine stream invertebratecommunities in Colorado

Objective: Introduction of non-native salmonids to western United States streams has resulted in extirpation and even extinction of native cutthroat trout. Once thought to be extinct, a genetically verified population of Greenback Cutthroat Trout (GBCT) Oncorhynchus virginalis stomias was identified and used for population re-establishment efforts. To restore native trout habitat, stream reaches above a dispersal barrier are typically treated with a piscicide (i.e., rotenone) to remove non-native trout before reintroduction of natives. One concern with this method is the possible impact to non-target invertebrates, which are an important food source for trout, and a drastic disturbance to invertebrates following rotenone treatment could negatively affect native trout establishment. Methods: Two alpine streams were treated with liquid rotenone via drip stations during two consecutive days. Invertebrate communities were sampled for six years in two streams where GBCT was reintroduced. Pre- and posttreatment sampling allowed for examination of short-term, intermediate, and long-term responses to invertebrate communities. Results: Negative short-term responses were detected for total taxa richness, EPT richness, and percent Heptageniidae density immediately following rotenone application. However, most community metrics returned to pretreatment values within 1 to 2 years posttreatment. Invertebrate community changes between pretreatment and 3 to 5 years posttreatment were observed with increased percent Chironomidae density and decreased percent EPT (Ephemeroptera, Plecoptera, Trichoptera) density. Conclusion: This study provides insight into invertebrate community response to rotenone treatment in high alpine streams and adds to the current literature which displays short-term declines in invertebrates following rotenone and recovery of most aspects of the initial invertebrate community within one year posttreatment. Lay Summary Rotenone application for cutthroat trout habitat restoration negatively affected invertebrate communities in the 1 to 2 months following treatment; however, most community values recovered to pretreatment levels within 1 to 2 years. Keywords: native fish, cutthroat trout, fish management, invertebrate community, habitat restoration

Colorado↗
USGS2026

Mercury biomagnification across food webs with varying non-native fish presence: Implications for native fish conservation in the upper Colorado River Basin

Environmental contaminants and non-native species introductions negatively affect aquatic ecosystem conservation. Mercury (Hg) accumulates within food webs where it can biomagnify to toxic concentrations, which can be affected by altered trophic relationships from non-native species. This study examined Hg concentrations (n samples = 655) and stable carbon and nitrogen isotope ( n = 746) compositions in native ( n = 313) and non-native ( n = 342) species among four river subbasins (Gunnison, Lower Green, Colorado-Dolores, and White-Yampa), in the Upper Colorado River Basin (UCRB) during 2016 and 2017 to inform the potential combined effects of Hg exposure and non-native species interactions on native fishes of conservation concern. We assessed Hg biomagnification at the fish assemblage level, compared concentrations to risk thresholds for fish and human health, and evaluated niche overlap among trophic levels across subbasins. The generalist-invertivores feeding guild had the lowest Hg concentrations (0.001–0.191 μg g −1 wet weight), and no individuals exceeded the U.S. Environmental Protection Agency aquatic life criterion (0.225 μg g −1 ). Piscivores had the highest concentrations (0.008–1.840 μg g −1 ), and 74% of individuals exceeded the criterion. Biomagnification across trophic levels was observed throughout the UCRB, yet varied by subbasin, with higher magnification factors in the Lower Green and White-Yampa subbasins which also had the highest proportion of non-native species. Stable isotope compositions revealed niche overlap among native and non-native species. Additionally, trophic position varied within species among the subbasins. The proliferation of non-native species has likely reshaped food webs and may have intensified the potential threat Hg poses to native fish recovery and conservation. This study documented increased Hg concentrations relative to past assessments, suggesting that continued monitoring could assist in evaluating trends in Hg accumulation. Particularly studies that focus on sources entering the food web, vectors for accumulation, and competitive interactions among native and non-native species.

Colorado, Utah, Wyoming↗
USGS2026

Sampling and analysis plan for the water-quality monitoring program in Lake Koocanusa and upper Kootenai River, Montana, water years 2022–23

The U.S. Geological Survey, in cooperation with the U.S. Environmental Protection Agency, collected water-quality samples and environmental data in Lake Koocanusa (also known as “Koocanusa Reservoir”), the Kootenai River, and the Tobacco River during water years 2022–23. The transboundary Lake Koocanusa is in southeastern British Columbia, Canada, and northwestern Montana, United States. It was formed by constructing Libby Dam on the Kootenai River 26 kilometers upstream from Libby, Montana. One of the lake sites and the Kootenai River site, in the Libby Dam tailwater (the outflow of the lake flow into the Kootenai River), were equipped with automated, high-frequency ServoSipper water samplers. At the lake site, these samplers were mounted to pontoon platforms during the summer, and a submersible ServoSipper sipper was deployed with ice buoys during the winter. Samples were automatically collected from multiple depths. At the Kootenai River site, these samplers were housed in the gage house. In water year 2022, discrete water-quality samples were collected every 4–6 weeks, year round, at all four lake sites in the Kootenai River between April and November. In water year 2023, discrete water-quality samples were collected at three lake sites and the Kootenai and Tobacco River sites every 4–6 weeks. The goal of this project was to collect multidepth, high-frequency vertical and temporal water-quality samples and data to understand the limnological and biological processes that control variations and trends in selenium concentrations and loads throughout Lake Koocanusa and in the Libby Dam tailwater at the southern end of the lake. This sampling and analysis plan documents the organization, sampling and data-collection scheme and design, pre- and post-collection processes, and quality-assurance and quality-control procedures of the Koocanusa/Kootenai water-quality monitoring program during water years 2022–23.

Montana↗
USGS2026

Selenium and mercury tissue partitioning and trophodynamics in the Lake Koocanusa (USA–Canada) fish community

Mining-related contaminants such as selenium (Se) and mercury (Hg) accumulate in aquatic organisms and transfer through aquatic food webs, where they can exert toxic effect undermining the ecological health of aquatic resources. Yet, how Se and Hg co-distribute within food webs and within individual organisms remains poorly understood. We compiled muscle and ovary Se and Hg concentration data from fishes captured in Lake Koocanusa—a North American reservoir receiving elevated Se and Hg inputs from coal mining operations in the Elk River Valley, Canada—to provide insights into the co-processing of Se and Hg within fish and among fish species, including how ecological or seasonal factors shift these distribution patterns. Se and Hg concentrations (ranges: 0.21–38.7 μg Se g −1 dry weight and 0.01–0.84 μg Hg g −1 wet weight), as well as Se:Hg molar ratios, varied substantially between tissues and among species, reflecting biological and ecological differences. Our results suggest that the decoupling of Se or Hg deposition in fish muscle versus ovary may reflect different pathways of impairment, at the individual and population levels, and that interspecific and tissue-specific variability makes it challenging to set a universal Se:Hg threshold for the protection of aquatic organisms.

British Columbia, Montana↗
USGS2025

Imidacloprid in United States rivers, 2013–2022: Persistent presence and emerging chronic hazard

Imidacloprid, a neonicotinoid insecticide, is used for agricultural and nonagricultural purposes and is toxic to nontarget organisms at low concentrations in aquatic ecosystems. A total of 12,547 water samples were collected from 2013 to 2022 from 77 rivers across the United States (U.S.) and were analyzed to evaluate detections and temporal trends in imidacloprid concentrations. Imidacloprid was detected in 44% of all samples, and the mean concentration, adjusted for nondetect samples, of 24.9 ng/L (median = 11.9 ng/L) was more than twice the chronic benchmark for freshwater invertebrates (10 ng/L). This potential hazard to aquatic life was persistent, with 44% of the sites having a median concentration exceeding the chronic benchmark. Half of the sites ( n = 38) had increasing trends, including large river sites along the Mississippi River. The mean increase was 10.6 ng/L over the past decade, while only six sites indicated decreasing trends. The estimated total loading of imidacloprid delivered to the Gulf of America from 2013 to 2022 was 129,489 kg (142.7 U.S. ton). The extensive presence of imidacloprid in U.S. waterways, the high percentage of sites with trends of increasing concentrations, and the prevalence of concentrations exceeding chronic benchmarks suggest widespread persistent risks to ecosystem health.

Environmental Science & Technology↗
USGS2025

Non-native prey availability and over-compensatory density dependence drive population dynamics of a native fish predator

Understanding the factors that regulate population dynamics is crucial for conserving imperiled species. Bull trout ( Salvelinus confluentus ), a piscivorous salmonid and one of North America's most threatened cold-water species, has declined significantly due to habitat loss, overfishing, invasive species, and climate change. While recovery efforts have primarily targeted these threats, the role of prey availability in influencing bull trout population dynamics under multiple stressors remains poorly understood. Using a stage-based integrated population model, we quantified the effects of non-native prey availability (kokanee; Oncorhynchus nerka ), angling pressure, climatic variation, and density-dependent processes on bull trout population dynamics in Lake Koocanusa, a transboundary reservoir and river system (United States and Canada), over a 40-year period (1980–2023). Our results show that bull trout populations are regulated by density-dependent processes, including over-compensation in sub-adult recruitment and reduced adult survival at high densities. Increased kokanee biomass and restricted harvest significantly enhanced bull trout survival and abundance, whereas reduced water availability had a limited negative effect on sub-adult production. Model simulations indicate that as kokanee biomass availability increases, the number of bull trout that can be sustainably harvested also increases. In fact, a modest annual fishery (300 individuals) can be sustained, especially under moderate to high kokanee biomass conditions. These results underscore the importance of prey availability, including non-native species, in supporting bull trout populations. Effective management of threatened apex fish predators like bull trout requires addressing the complex interplay between environmental threats, prey dynamics, and density-dependent mechanisms across all life stages.

British Columbia, Montana↗
USGS2025

Diverging fish biodiversity trends in cold and warm rivers and streams

Worldwide, freshwater systems contain more than 18,000 fish species 1,2,3 , which are critical to the functioning of these ecosystems 4 and are vital cultural and economic resources to humans 5,6,7 ; despite this value, fish biodiversity is at risk globally 8,9 . In the USA, leading threats to fish communities in rivers and streams include climate change and invasive fish introductions and game fish stocking by humans 10,11,12,13,14 . Here we harmonized US federal biomonitoring datasets with 389 species spanning 27 years (1993–2019) and 2,992 sites to analyse trends in fish biodiversity. In cold streams (past summer stream temperatures below 15.4 °C), fish abundance and richness declined by 53.4% and 32% over 27 years, respectively, and uniqueness increased. Periodic (large-bodied, late-maturing) fishes increased, and opportunists (small-bodied, short generation time, ‘r-selected’) decreased, possibly due to proliferation of native or introduced game fishes. In warm streams (stream temperatures greater than 23.8 °C), fish abundance and richness increased by 70.5% and 15.6% over 27 years, respectively, and communities homogenized. Small opportunistic fishes replaced large periodic fishes. Intermediate streams (stream temperatures 15.4–23.8 °C), representing the average stream, had minimal changes in fish biodiversity through time. Interactions between warming and introduced fish were associated with increased rates of degradation to local fish biodiversity. Given the magnitude of these changes in a relatively short time span, there is an urgent need to curb degradation of fish biodiversity caused by fish introductions and warming water temperatures.

continental United States↗
USGS2025

Preparation and analysis methods for fish tissue collected from Lake Koocanusa, Montana

Lake Koocanusa, a reservoir, receives mine wastes from metallurgical coal mines in the Elk River Valley of British Columbia, Canada. Selenium and other elements discharged by the mines into the waters of the United States can pose unknown risks to aquatic life. The U.S. Geological Survey Wyoming-Montana Water Science Center can collaborate with Montana Fish, Wildlife and Parks and other State and Federal agencies to design studies and to collect fish tissues to help fill this knowledge gap. This report describes the processes, techniques, and methods used to collect and analyze fish tissue collected from Lake Koocanusa; and procedures used to review and manage data, including quality assurance and quality control procedures used by the U.S. Geological Survey Wyoming-Montana Water Science Center and supporting analytical laboratories. These fish tissue collections began in 2021.

Montana↗
USGS2025

Tree swallow (Tachycineta bicolor) demographics and metal(loid) concentrations in egg contents from the Kootenai River basin, Montana nest box colonies

Selenium (Se) levels in water have been increasing in Lake Koocanusa and the Kootenai River below Libby Dam in Montana due to coal mining in the drainage basin of the Elk River, British Columbia. Aquatic monitoring of Se is ongoing to assess potential effects; however, exposure to terrestrial, aquatic-dependent wildlife has not been investigated. Tree swallows are a targeted receptor for evaluation of potential Se-related effects as this species is a mid-level consumer with aquatic-terrestrial food web linkages, is sensitive to Se, and reliably uses nest boxes. The goals of this project were to identify tree swallow demographics and metal(loid) concentrations to assess potential species and ecosystem-level effects within the Kootenai River basin study area. During 2022 and 2023, a total of 98 nest boxes were monitored across ~ 120 km of shoreline; 60 eggs were collected. Egg metal(loid) concentrations, including Se, were below levels identified to cause reproductive effects in avian species. However, nest box occupancy increased with distance from the US/Canada border ( P < 0.001; R 2 = 0.83), and Se concentrations were significantly higher ( P = 0.014) in 2023 than 2022 (3.2 (3.0–3.4) and 2.8 (2.6–3.1), respectively; geometric mean, 95% CI; mg/kg, dw). With ongoing mining operations in the drainage basin of the Elk River, these results suggest that long-term monitoring of tree swallows will support assessment of spatiotemporal metal(loid) trends. Additional data, including tree swallow foraging patterns, will allow evaluation of differences in nest box occupancy and metal(loid) concentrations in the Kootenai River basin.

Montana↗
USGS2025

Integrating the bright and dark sides of aquatic resource subsidies – A synthesis

Aquatic and terrestrial ecosystems are linked through the reciprocal exchange of materials and organisms. Aquatic-to-terrestrial subsidies are relatively small in most terrestrial ecosystems, but they can provide high contents of limiting resources that increase consumer fitness and ecosystem production. However, they also may carry significant contaminant loads, particularly in anthropogenically impacted watersheds. Global change processes, including land use change, climate change and biodiversity declines, are altering the quantity and quality of aquatic subsidies, potentially shifting the balance of costs and benefits of aquatic subsidies for terrestrial consumers. Many global change processes interact and impact both the bright and dark sides of aquatic subsidies simultaneously, highlighting the need for future integrative research that bridges ecosystem as well as disciplinary boundaries. We identify key research priorities, including increased quantification of the spatiotemporal variability in aquatic subsidies across a range of ecosystems, greater understanding of the landscape-scale extent of aquatic subsidy impacts and deeper exploration of the relative costs and benefits of aquatic subsidies for consumers.

Ecology Letters↗
USGS2024

Evidence of long-range transport of selenium downstream of coal mining operations in the Elk River Valley, Canada

Expanding coal-mining operations in the Elk River Valley (British Columbia, Canada) have increased total selenium (Se) concentrations in the transboundary Lake Koocanusa (Canada and United States), but the spatial extent of Se transport from the Elk River Mines is unknown. We evaluated multiple lines of evidence of long-range transport of Se at five sites downstream of the mines relative to a site unaffected by the mines. First, all mine-affected sites had increasing trends in flow-normalized Se concentrations between 2005 and 2021 (35–89%), while no trend was observed at the unaffected site between 2005 and 2017. Second, all mine-affected sites had elevated annual mean Se concentrations and 5-year mean annual loads (2013–2017) by up to an order of magnitude relative to the unaffected site. Third, Se concentrations and the magnitude of the concentration trend generally decreased with distance downstream from the mines while loads increased, which is consistent with the downstream transport of the bulk of the Se load from the mines with smaller contributions from other sources. These results provide multiple lines of evidence that Se from the Elk River Mines is transported over 575 river kilometers and may pose risks to aquatic life in the transboundary Columbia River.

Elk River Valley↗
USGS2024

Improving ecosystem health in highly altered river basins: A generalized framework and its application to the Mississippi-Atchafalaya River Basin

Continued large-scale public investment in declining ecosystems depends on demonstrations of “success”. While the public conception of “success” often focuses on restoration to a pre-disturbance condition, the scientific community is more likely to measure success in terms of improved ecosystem health. Using a combination of literature review, workshops and expert solicitation we propose a generalized framework to improve ecosystem health in highly altered river basins by reducing ecosystem stressors, enhancing ecosystem processes and increasing ecosystem resilience. We illustrate the use of this framework in the Mississippi-Atchafalaya River Basin (MARB) of the central United States (U.S.), by (i) identifying key stressors related to human activities, and (ii) creating a conceptual ecosystem model relating those stressors to effects on ecosystem structure and processes. As a result of our analysis, we identify a set of landscape-level indicators of ecosystem health, emphasizing leading indicators of stressor removal (e.g., reduced anthropogenic nutrient inputs), increased ecosystem function (e.g., increased water storage in the landscape) and increased resilience (e.g., changes in the percentage of perennial vegetative cover). We suggest that by including these indicators, along with lagging indicators such as direct measurements of water quality, stakeholders will be better able to assess the effectiveness of management actions. For example, if both leading and lagging indicators show improvement over time, then management actions are on track to attain desired ecosystem condition. If, however, leading indicators are not improving or even declining, then fundamental challenges to ecosystem health remain to be addressed and failure to address these will ultimately lead to declines in lagging indicators such as water quality. Although our model and indicators are specific to the MARB, we believe that the generalized framework and the process of model and indicator development will be valuable in an array of altered river basins.

Mississippi-Atchafalaya River Basin↗
USGS2024

Multiple lines of evidence point to pesticides as stressors affecting invertebrate communities in small streams in five United States regions

Multistressor studies were performed in five regions of the United States to assess the role of pesticides as stressors affecting invertebrate communities in wadable streams. Pesticides and other chemical and physical stressors were measured in 75 to 99 streams per region for 4 weeks, after which invertebrate communities were surveyed (435 total sites). Pesticides were sampled weekly in filtered water, and once in bed sediment. The role of pesticides as a stressor to invertebrate communities was assessed by evaluating multiple lines of evidence: toxicity predictions based on measured pesticide concentrations, multivariate models and other statistical analyses, and previously published mesocosm experiments. Toxicity predictions using benchmarks and species sensitivity distributions and statistical correlations suggested that pesticides were present at high enough concentrations to adversely affect invertebrate communities at the regional scale. Two undirected techniques—boosted regression tree models and distance-based linear models—identified which pesticides were predictors of (respectively) invertebrate metrics and community composition. To put insecticides in context with known, influential covariates of invertebrate response, generalized additive models were used to identify which individual pesticide(s) were important predictors of invertebrate community condition in each region, after accounting for natural covariates. Four insecticides were identified as stressors to invertebrate communities at the regional scale: bifenthrin, chlordane, fipronil and its degradates, and imidacloprid. Fipronil was particularly important in the Southeast region, and imidacloprid, bifenthrin, and chlordane were important in multiple regions. For imidacloprid, bifenthrin, and fipronil, toxicity predictions were supported by mesocosm experiments that demonstrated adverse effects on naïve aquatic communities when dosed under controlled conditions. These multiple lines of evidence do not prove causality—which is challenging in the field under multistressor conditions—but they make a strong case for the role of insecticides as stressors adversely affecting invertebrate communities in streams within the five sampled regions.

Science of the Total Environment↗
USGS2023

Growth of coal mining operations in the Elk River Valley (Canada) linked to increasing solute transport of Se, NO3-, and SO42- into the transboundary Koocanusa Reservoir (USA-Canada)

Koocanusa Reservoir (KOC) is a waterbody that spans the United States (U.S.) and Canadian border. Increasing concentrations of total selenium (Se), nitrate + nitrite (NO 3 – , nitrite is insignificant or not present), and sulfate (SO 4 2– ) in KOC and downstream in the Kootenai River (Kootenay River in Canada) are tied to expanding coal mining operations in the Elk River Watershed, Canada. Using a paired watershed approach, trends in flow-normalized concentrations and loads were evaluated for Se, NO 3 – , and SO 4 2– for the two largest tributaries, the Kootenay and Elk Rivers, Canada. Increases in concentration (SO 4 2– 120%, Se 581%, NO 3 – 784%) and load (SO 4 2– 129%, Se 443%, NO 3 – 697%) in the Elk River (1979–2022 for NO 3 – , 1984–2022 for Se and SO 4 2– ) are among the largest documented increases in the primary literature, while only a small magnitude increase in SO 4 2– (7.7% concentration) and decreases in Se (−10%) and NO 3 – (−8.5%) were observed in the Kootenay River. Between 2009 and 2019, the Elk River contributed, on average, 29% of the combined flow, 95% of the Se, 76% of the NO 3 – , and 38% of the SO 4 2– entering the reservoir from these two major tributaries. The largest increase in solute concentrations occurred during baseflows, indicating a change in solute transport and delivery dynamics in the Elk River Watershed, which may be attributable to altered landscapes from coal mining operations including altered groundwater flow paths and increased chemical weathering in waste rock dumps. More recently there is evidence of surface water treatment operations providing some reduction in concentrations during low flow times of year; however, these appear to have a limited effect on annual loads entering KOC. These findings imply that current mine water treatment, which is focused on surface waters, may not sufficiently reduce the influence of mine-waste-derived solutes in the Elk River to allow constituent concentrations in KOC to meet U.S. water-quality standards.

Environmental Science and Technology↗
USGS2023

Density declines, richness increases, and composition shifts in stream macroinvertebrates

Documenting trends of stream macroinvertebrate biodiversity is challenging because biomonitoring often has limited spatial, temporal, and taxonomic scopes. We analyzed biodiversity and composition of assemblages of >500 genera, spanning 27 years, and 6131 stream sites across forested, grassland, urban, and agricultural land uses throughout the United States. In this dataset, macroinvertebrate density declined by 11% and richness increased by 12.2%, and insect density and richness declined by 23.3 and 6.8%, respectively, over 27 years. In addition, differences in richness and composition between urban and agricultural versus forested and grassland streams have increased over time. Urban and agricultural streams lost the few disturbance-sensitive taxa they once had and gained disturbance-tolerant taxa. These results suggest that current efforts to protect and restore streams are not sufficient to mitigate anthropogenic effects.

Science Advances↗
USGS2022

Lack of evidence for indirect effects from stonefly predators on primary production under future climate warming scenarios

Consumptive and non-consumptive interactions of predators and prey can have strong direct and indirect effects on primary producers, such as stream algae. Increasing water temperatures may alter these interactions and thus influence productivity in streams. For each of 3 temperature treatments (‘ambient’, +2°C and +4°C), we measured the amount of algal biomass removed by grazing mayflies from 91 mesocosms after a 24-hour test period under 3 grazing treatments: lethal predators, non-lethal predators, and no predators. At all temperatures, grazers reduced algal biomass (p < 0.01), and the presence of lethal predators effectively dampened mayfly consumption of algae (p < 0.01). However, differences in algal biomass between lethal and non-lethal predator treatments were not significant, indicating that predators had no indirect behaviorally mediated effects on grazer consumption. Grazer removal of algal biomass marginally increased with increasing temperature (p = 0.051). We analyzed video data for changes in grazer foraging and drift behavior. Mayflies increased drift in the presence of lethal predators (p < 0.01) but not non-lethal predators, and no behavioral changes were seen with temperature increases. Mesocosms can help elucidate possible future shifts in trophic interactions due to climate warming. Yet, we found no evidence of indirect stonefly predator effects on grazing mayflies under these warming scenarios.

Écoscience↗
USGS2022

Sediment sources and sealed-pavement area drive polycyclic aromatic hydrocarbon and metal occurrence in urban streams

Metals and polycyclic aromatic hydrocarbons (PAHs) are common pollutants in urban streambed sediment, yet their occurrence is highly variable and difficult to predict. To investigate sources of PAHs and metals to streambed sediment, we sampled pavement dust, soil, and streambed sediment in 10 urban watersheds in three regions of the United States and applied a fallout-radionuclide-based sediment-source analysis to quantify the pavement dust contribution to stream sediment (%dust). We also mapped the area of sealcoated pavement in each watershed (%sealed) to investigate the role of coal-tar pavement sealant (CTS) as a PAH source. Median total and carbon-normalized total PAH concentrations were significantly higher in streambed sediment in the Northeast (54.3 mg/kg and 2.71 mg/gOC) and Southeast (5.37 mg/kg and 1.36 mg/gOC), where CTS is commonly used, than in the Northwest (2.11 mg/kg and 0.071 mg/gOC), where CTS is rarely used. Generalized additive models indicated that %sealed and in some cases %dust significantly affected total PAH concentrations in streambed sediments. The %dust was a significant variable for common urban metals: Cu, Pb, and Zn. These findings advance our quantitative understanding of the role of pavement dust as a source and a vector of contaminants to urban streams.

Georgia, New York, North Carolina, Oregon, Virgini↗