Geology topics
Publications and source records attributed to Theresa L. Liedtke.
A symposium at the 2022 American Fisheries Society meeting highlighted collaborations among biologists, policymakers, and Native American tribes addressing conservation for native lampreys. We present key findings from the symposium and related research and an example of grassroots effort to protect and restore Pacific Lamprey.
Larval lampreys are filter feeders that live for several years burrowed in fine sediments in freshwater streams. Stream side channels and edges, where larval lampreys gather, are vulnerable to natural and human-caused dewatering. Water level reductions can strand and kill thousands of larval lampreys, in part because many remain burrowed until their habitats are exposed, at which point larvae must emerge and attempt to move over dewatered substrate to locate wetted habitat. Dewatering for restoration efforts or seasonal closures of irrigation canals can be done slowly to reduce lamprey strandings, but in some settings, mechanisms are lacking to control the dewatering rate. Phased dewatering, where water level is reduced in stages separated by periods of static water level, could provide options when dewatering rate cannot be tightly controlled. To guide this phased approach, information is needed on the movement capability of larval lampreys. We examined larval lamprey ( Entosphenus tridentatus and Lampetra spp.) movement distance and rate over dewatered substrate at shoreline slopes of 1%, 5%, 10% and 20% in a laboratory setting and modelled results using gamma regression models. Model results suggest both movement distance and movement rate increased with increasing slope and increasing larval length. We used the models to predict minimum distances and rates that 90%, 75% and 50% of medium-sized (75 mm) lampreys would move over dewatered substrates on slopes of 1%–20%. The models predicted that 50% of larvae could move distances of ≥31 cm at rates of ≥0.7 mm/s on a 1% slope and distances of ≥502 cm at rates of ≥8.6 mm/s on a 20% slope. We present an example scenario of how information on larval movement capabilities and shoreline slope could guide phased dewatering events to limit impacts to lampreys.
The Pacific Lamprey Conservation Initiative (PLCI) is a collaboration of Tribes, Federal, and State agencies working together to protect and restore Pacific Lamprey ( Entosphenus tridentatus ) and other native lampreys (i.e., Lampetra spp.) in Alaska, Washington, Oregon, California, and Idaho. The U.S. Fish and Wildlife Service hosts and facilitates the PLCI, and the Columbia River Tribes play a large role in setting conservation goals and defining research needs. The PLCI annually solicits proposals for research and restoration activities, which are reviewed and ranked in collaboration with the Bonneville Power Administration (BPA), who annually provides funding to support PLCI priority proposals. This report summarizes two research projects selected through PLCI, and funded under one BPA contract, in support of Pacific Lamprey conservation. The two projects were not topically related apart from a common theme of potential stressors to lampreys and are being reported together because they were combined under one BPA agreement for contracting.
Sediment manipulation activities such as dredging and restoration efforts (e.g., culvert install/repair) may disturb habitats where larval lampreys live burrowed in stream sediments. Sediment added on top of larval lamprey burrowing areas results in ‘overburden’, which poses risks of mortality from respiratory distress, reduced movement, and crushing injuries or may have sublethal effects such as changes in growth or burrowing activity. To avoid negative outcomes, larvae must be able to vertically migrate through the overburden to reach areas near the new (elevated) sediment-water interface. Current guidance on how to limit negative impacts to lampreys during sediment handling activities is limited by a lack of information on how lampreys respond to overburden. The goal of this study was to evaluate larval lamprey responses to variable overburden depths and exposure durations using two sediment types: fine (<0.250 mm) and sand (0.250 - 0.500 mm). We assessed lamprey (mix of Pacific Lamprey Entosphenus tridentatus and Lampetra spp.) survival and injury and evaluated burrowing performance as an indicator of sublethal impacts of overburden stress. We designed an experimental system using 15-cm diameter plastic tubes partitioned into sections that allowed us to describe the approximate vertical position of larval lampreys within the overburden so we could assess vertical migration ability. The tube sections were stacked in a column and secured using straps. The bottom tube section was 10 cm tall and was attached to a flat, rectangular base plate. This section was filled with sediment and lampreys at the start of a test. The middle tube sections were each 10 cm tall, with the number of sections adapted to the depth of the overburden. The top tube section was 20 cm tall to allow room for 10 cm of water over the surface of the overburden. Sampling involved removing the tubes from a holding tank and quickly separating the sections to locate lampreys and assign their position to the tube section where they were recovered. Our primary objectives for the study were to better understand how depth of overburden and exposure duration affect larval lampreys, but there was no previously published information to inform our selection of test parameters. Thus, we used a two phased approach where Phase 1 was a pre-test to help us refine appropriate treatments for Phase 2. In Phase 1 of the study, we used a constant overburden depth (50 cm) and exposure duration (24 h) to compare four sediment treatments that varied the initial burrowing sediment and the overburden sediment: fine-fine, fine-sand, sand-fine, sand-sand. In all four treatments, most lampreys vertically migrated through the overburden and were recovered in the uppermost tube section 24 h after overburden was added. There were no lamprey mortalities, few injuries, and little evidence of sublethal effects of overburden stress based on burrowing performance tests. Lampreys moved the most in the fine-sand and fine-fine treatments, so they were used for continued testing. In Phase 2 we doubled the overburden depth to 100 cm and tested extended exposure durations (1 to 4 d), and based on those results, added tests of shorter durations (1 to 8 h). Since both treatments used fine sediment for initial borrowing, these tests effectively compared fine and sand sediments as overburden. Overall for Phase 2, there were no lamprey mortalities, little evidence of sublethal effects, and 6.4% of the treatment fish were injured. Most of the injuries were mild abrasions, but some fish had serious damage such as a large gash or nearly complete bisection. We estimate that the serious injuries occurred as tube sections were separated during sampling, but the cause of the minor injuries could not be clearly ascribed to overburden stress or sampling activity. Lampreys moved to the upper sections of the tubes through 100 cm of fine and sand overburden within 1 d. Lamprey position was comparable among the 1-4 d exposures, although position was more variable at 1 d compared to 4 d. Tests of exposures less than 24 h showed that fewer than 40% of lampreys completed vertical migrations to the top of the tube after 4 h, and after 8 h the uppermost tube section contained 33% of lampreys in the sand treatment and 44% of lampreys in the fine treatment. We concluded that the minimum time needed for most lampreys to complete vertical migrations through 100 cm of overburden lies somewhere between 8 and 24 h. Lamprey size influenced recovery position in 4 and 8 h exposures to sand overburden, but not for other tests. The mean size of fish near the bottom of the tubes was significantly larger than the size of fish near the top of the tubes. To our knowledge this was the first formal study to evaluate lamprey responses to overburden. Although our test systems were imperfect simulations of natural conditions, and several questions would benefit from additional research, our findings can inform guidelines on sediment handling practices to limit negative impacts to larval lampreys.
Objective Dewatering of fine sediments in rivers and streams can kill many thousands of larval lampreys (order Petromyzontiformes) that are burrowed in these habitats. The larval life stage for lampreys lasts 3–10 years, and because larvae often aggregate in large numbers, negative impacts from dewatering could potentially deplete local populations and affect multiple year-classes. Larval lampreys have not traditionally been considered during instream projects, but recent efforts to increase awareness of lamprey habitats have resulted in guidance on dewatering approaches to limit impacts to lampreys. Salvage efforts to rescue and relocate lampreys aim to mitigate losses, but a lack of understanding of lamprey responses limits the optimization of dewatering and salvage procedures. Methods We summarize the state of the science for nine factors that influence larval lamprey ( Entosphenus and Lampetra spp.) responses to dewatering, including burrowing depth, the prevalence and timing of emergence, movements, survival, shoreline slope, dewatering rate, light, and lamprey size. Result Research suggests that (1) shoreline slope influences movement capability, (2) hot and sunny conditions increase the risk of mortality, (3) salvage activities cause minimal direct mortality, and (4) smaller larvae are especially vulnerable to negative impacts from dewatering because they are more likely to emerge and are less capable of movement. Critical uncertainties associated with dewatering include cues that drive emergence, the influence of sediment composition and stratigraphy, vertical distribution of larvae in natural settings, use of the hyporheic zone, the scale of predation losses, and the effectiveness and impacts of salvage activities. Conclusion Balancing investments in salvage operations and lamprey exclusion efforts (e.g., screening) and developing field survey approaches to evaluate lamprey use of the hyporheic zone are identified management implications and research needs. Addressing the critical uncertainties discussed here and providing updated, science-based guidance on dewatering and salvage practices are suggested management actions to support lamprey conservation.
Objective Human-induced dewatering of freshwater habitats causes mortality of larval lampreys (family Petromyzontidae). Salvage by electrofishing at dewatering events is assumed to reduce this mortality, but to our knowledge this assumption remains unassessed. Methods We estimated mortality of salvaged larval lampreys ( Lampetra spp. and Pacific Lamprey Entosphenus tridentatus ) within 24 h following collection at field dewatering events in July and October. To assess when salvage may reduce mortality, we compared mortality of salvaged individuals from field dewatering events to mortality of burrowed and emerged individuals in dewatered habitats in the laboratory. Salvage protocols included electrofishing and foot pressure from walking in test enclosures before and after dewatering. Electrofishing after dewatering (“dry shocking”) involves positioning probes on moist sediment to entice burrowed larval lampreys to emerge. Result During the July salvage, air temperature averaged 36°C, bottom water temperature averaged 20°C, and many emerged larval lampreys were dead on the sediment surface. During two October events, air temperatures averaged 18 and 11°C, bottom water temperatures averaged 12 and 7°C, and only one dead emerged larval lamprey was observed. Estimated mortality of salvaged larval lampreys was 0.20 (90% credible interval = 0.09–0.37) in July and 0.00 (90% credible interval = 0.00–0.06) and 0.06 (90% credible interval = 0.01–0.18) in October. All larval lampreys that remained burrowed and were excavated from enclosures after salvage were dead in July but alive in October. Logistic regression suggested that mortality declined with increasing larval length. Mortality of salvaged 80-mm larval lampreys in October was lower than that of 80-mm individuals emerged for 1 h or burrowed for 8 h at similar water temperatures (8–10°C) in the laboratory. Conclusion In this study, electrofishing for salvage caused minimal mortality of burrowed and emerged larval lampreys in dewatered habitats. Thus, salvage using electrofishing methods could aid conservation of native lampreys by reducing mortality associated with human-induced dewatering events, especially when temperatures are elevated.
Declines in populations of Pacific Lamprey (Entosphenus tridentatus) have raised concerns by the Columbia River tribes, who then initiated efforts to protect and restore them throughout their historical range. The Columbia River Inter-Tribal Fish Commission (CRITFC) devised a restoration plan for lamprey in the Columbia River Basin which highlights the significance of lamprey to the tribes and recommends conservation actions. The plan calls for the development of artificial propagation (AP) protocols to provide fish for research (e.g., downstream passage studies) and restoration activities (e.g., supplemental releases into streams/rivers). The ideal outcome of these efforts would be cultured fish that are comparable to the corresponding wild fish, and efforts are underway to conduct such evaluations in larval and juvenile lamprey. The CRITFC lamprey restoration plan lists improving dam passage for juvenile and larval lamprey as a high priority action. Active telemetry techniques have not been an option until recently, when a prototype micro acoustic transmitter was designed for small, elongate fishes like lamprey and eels. Passage survival studies of juvenile and larval lamprey using acoustic telemetry are now possible but are challenged with the limited availability of research animals. The use of AP fish would facilitate passage survival studies, under the assumption that AP juvenile and larval lamprey perform and survive comparably to the wild lamprey they are intended to represent. The current study was enacted to add to the growing knowledge of how reliably AP lamprey can be used as surrogates for wild lamprey. Study objectives were to: 1) compare the swimming ability of AP and wild juvenile lamprey implanted with the prototype micro acoustic transmitter and 2) compare the performance of AP and wild larval lamprey by evaluating night activity levels, burrowing ability, and photokinetic response to tail illumination over a period of 5-months in a culture setting. Evaluations of juvenile lamprey sustained swimming performance did not reveal any differences between tagged and untagged lamprey of AP or wild origin. We standardized the stage of transformation for all tested lamprey to minimize variation. Our tests were constrained by limited access to juvenile lamprey, so significant differences between rearing types may have gone undetected. More information on how rearing type influences other lamprey life stages and swimming performance will add to the growing knowledge on how reliably AP lamprey can serve as surrogates for wild lamprey. We compared AP and wild larval lamprey using three performance metrics, both shortly after they arrived at our laboratory and through a 5-month study period. Within the AP and wild test groups, we divided lamprey into small (30-70 mm total length) and large (80-120 mm total length) size categories, forming four test groups. Each of the test groups were comprised of 25 lamprey and were held in separate tanks. These tanks were the source of test fish for all performance testing. Our results for 2 of 3 of the performance metrics showed no differences between rearing types, and we found limited evidence to suggest that duration in a culture setting changed performance. Night activity levels were low for all test groups. Burrowing times were significantly different by rearing type, with wild lamprey burrowing faster than AP lamprey, in both the small and large size categories. These significant differences in rearing type could be a concern for use of AP lamprey for restoration or research needs, but they may not be biologically meaningful. Both AP and wild lamprey completed burrowing in median times of less than 1 min, which minimizes concerns about predation risk. Additional opportunities to evaluate burrowing performance of AP and wild larval lamprey would be helpful to inform future planned uses of AP lamprey. Finally, our evaluations of photokinetic response to tail illumination revealed similar proportions of AP and wild larvae moving in response to illumination, and no significant differences in response time between the groups. The wild lamprey, however, consistently had faster (but not significantly) response times than AP fish. This finding supports the significantly faster burrowing times we observed for wild lamprey compared to AP fish. Taken together, these lines of evidence raise some concerns for the ability of AP lamprey to serve as defensible surrogates for wild lamprey because the ability to reliably burrow is so critical for larvae. Burrowing performance and photokinetic response to tail illumination were both easy to measure and will be valuable metrics for evaluating rearing types in future studies.
A flexible spill program in the federal Columbia River power system increased the total dissolved gas (TDG) water quality standards (i.e., the gas cap) from 120% to 125%. Spill is used to pass juvenile salmon (Oncorhynchus spp.) over dams, but it can generate elevated TDG, and exposed fish can develop gas bubble trauma (GBT) or experience mortality. Juvenile salmon are monitored for GBT through the Fish Passage Center’s (FPC), and under the flexible spill program, native non-salmonid fishes are also monitored. Pacific Lamprey (Entosphenus tridentatus) are exposed to elevated TDG, but nothing is known about their risk for GBT. This project is the first to evaluate GBT in lamprey, beginning with larval and juvenile lamprey in a controlled laboratory setting. These early life stages were chosen for this initial work because they have been shown to be more sensitive to GBT in other fish species. We modified the FPC protocol for GBT exams to be specific to lamprey and ranked bubbles in the mouth, eyes (juveniles only), gill pores, first and second dorsal fins, caudal fin, anal fin, vent, and body. We followed the FPC ranking criteria and assigned rank based on the proportion of the area occluded with bubbles, as 0=no bubbles, 1=1-5%, 2=6-25%, 3=26-50%, and 4=>50%. Four experiments were completed with larval lamprey from January to September 2022 using small (70 mm total length or less) and large (86 mm total length or greater) larvae in approximately equal proportions. Experiments included: (1) 130% TDG for 31 d, (2) 125% TDG for 91 d, (3) 130% TDG for 20 d with assessments of burrowing performance, and (4) 128-138% TDG for 3-4 d with assessments of predator avoidance ability and the corresponding untreated control groups. The first and second experiments had similar study designs and findings. First, we tested an acute exposure at 130% TDG and then we tested a chronic exposure at 125%, to represent a full spill season. None of the controls (exposed to normally saturated water) experienced mortality or showed GBT signs. Few lamprey in the treatment groups (5% in Experiment 1; 0% in Experiment 2) showed GBT signs, and there were no mortalities (n=200 fish experiment 1; n=100 fish Experiment 2). Lamprey with GBT signs had bubbles on the body, with low severity ranks. During external exams for Experiment 2, we observed bubbles in the gut of several lamprey. The light coloration and transparency of the body made these observations possible, and we confirmed the finding with internal exams. From day 9 to day 91, 70.8% of the lamprey examined had bubbles in the gut. We observed five lamprey that were positively buoyant in the test tanks, and we likely underestimated the prevalence of floating as our procedures were not initially designed to document this sign. In our third experiment, burrowing performance was not significantly different between lamprey exposed to 130% TDG and controls. Mortality was 4.2% in the treatment group, but no GBT signs were observed. The proportion of lamprey with positive buoyancy increased through time, with 87.5% of fish floating on day 20 (end of the test). Bubbles in the gut were observed for some lamprey on each of five sampling dates (day 2 to 20), with prevalence ranging from 50-100%. Median burrow times ranged from 28 to 154 sec for treatment fish and from 40 to 100 sec for controls. We noted some atypical behaviors during burrow performance tests, including lamprey that were positively buoyant and unable to descend through 0.5 m of water to reach the sediment as well as lamprey that were unable to complete burrowing (within 10 min test period). These lamprey were so buoyant that they repeatedly floated to the surface of the water when they stopped or slowed their burrowing movements. Predator avoidance ability was assessed in our fourth experiment by exposing lamprey with GBT signs (floating) and controls to sculpin (Cottus spp.) until about 50% of the fish had been consumed or 2 h had passed. We completed five predation trials, testing the hypothesis that an equal proportion of treatment and control lamprey would be consumed. Treatment groups were generated by exposing 15 lamprey to 128-138% TDG for 3-4 d, until at least 10 lamprey were floating. Overall, 41 treatment and 46 control fish were eaten and there was no evidence that sculpin preferentially preyed upon lamprey with GBT signs. Additional tests with another predator are recommended. Two experiments were completed with juvenile lamprey from March to November 2022: Experiment 5 exposed fish to 125% TDG for 10 d and Experiment 6 exposed fish to 125% for 16 d. Mortality rates for the treatment groups were 21.7% and 20.0% for these experiments, respectively, and few lamprey (4 per experiment) showed GBT signs. With the results from experiments pooled, bubbles were observed in all body areas with low severity ranks (means 0-1). We observed some exophthalmia and bubbles behind the gill pores, in addition to bubbles in the gut and fish floating. The presence of bubbles in or near the gill pores was the likely cause of death as exam findings included enlarged gill pore areas and restricted openings. This project provided the first insights into lamprey responses to elevated TDG, but substantial learning opportunities remain. Our findings highlight that lamprey are vulnerable to GBT, but the effects are generally sublethal and would not be detected using FPC exam procedures. For example, we observed larval and juvenile lamprey that had bubbles in the gut and/or were floating, although these conditions were not consistently linked. More data are needed, but we surmise that it takes some time for bubbles to form in sufficient quantity to create the floatation required to overcome the mass of the lamprey. Positive buoyancy in natural settings could have substantial impacts to the risk of mortality for lamprey. Future studies could test GBT risk for larval lamprey in burrows, investigate the influence of lamprey size, measure performance (e.g., burrowing, swimming, predator avoidance ability) after elevated TDG exposure, and describe the rate that GBT signs dissipate when lamprey are returned to normally saturated water.
In this study we examine the potential effects of three predicted sea level rise (SLR) scenarios on the nearshore eelgrass ( Zostera marina L.) and surf smelt ( Hypomesus pretiosus ) spawning habitats along a beach on Bainbridge Island, Washington. Baseline bathymetric, geomorphological, and biological surveys were conducted to determine the existing conditions at the study site. The results of these surveys were coupled with a predictive model that estimates SLR-induced changes to coastal ecosystems based upon local topography and land-cover data. This model simulates the changes in nearshore habitat through time. The model inputs for SLR are probable values reported by the Intergovernmental Panel on Climate Change, and by user-defined values. The predicted effects of SLR are presented as (1) habitat type change and (2) the graphic response of developed dry land depicting the influence of shoreline armoring. This report describes the geophysical and biological characteristics at the Bainbridge Island study site, the modeling methods used to produce depictions of habitat changes, and a possible decrease in surf smelt spawning and an increase in eelgrass habitat availability in response to increases in sea level.
Anthropogenic barriers to main-stem and tributary passage are one of the primary threats associated with declining populations of Pacific Lamprey ( Entosphenus tridentatus ) in the Columbia River Basin. Juvenile lamprey are of special interest because their downstream migration to the ocean may be affected by barriers such as dams or water diversions. Telemetry studies that describe the movement and passage of juvenile lamprey have not been possible until the recent development of a micro-transmitter specifically for use in juvenile lamprey and eels. Through a collaborative research approach, we used these prototype transmitters and acoustic monitoring arrays installed for a juvenile salmon ( Oncorhynchus spp.) migration study to evaluate juvenile lamprey movements in the Yakima River (river kilometer 179 to the river mouth) in 2019 and 2020. We tagged and released 152 juvenile lamprey from April 30 to June 5, 2019, and on June 9, 2020. Lamprey were released 6.9 kilometers (km) upstream from Wapato Dam, 1.2 km upstream from Prosser Dam, and into the canal and tailrace at Prosser Dam. Most tagged lamprey did not initiate downstream movements within the 18 days of tag life, as evidenced by our detections of lamprey in the highest numbers at the first monitoring site downstream from their release site, with limited or no detections at sites farther downstream. There was no evidence of missed detections (lamprey detected at a downstream site without corresponding detections upstream). Overall detections of tagged lamprey were low: 27.0 percent in 2019 and 48.0 percent in 2020. River flows were less than the 10-year average during the monitoring period and water temperatures were variable. Lamprey arrived at detections sites predominantly during periods of darkness (85.3–96.6 percent) following daytime releases. Travel rates through the study area ranged from 0.2 to 45.3 kilometers per day, and lamprey generally remained at each detection station for less than about 20 minutes. Groups of lamprey released together generally had similar travel rates with a small number of fish that moved more quickly or slowly than the remainder of the group. In addition to monitoring the migration and behavior of juvenile lamprey, we also assessed some assumptions of survival models (determining downstream drift of purposely killed fish and empirically measuring transmitter operating life) to benefit future evaluations focused on migration survival of juvenile lamprey.
A portable suction-dredge and sluice-box system were used to collect larval lampreys ( Entosphenus tridentatus and Lampetra spp.) from fine and coarse sediment in field and laboratory tests. We evaluated the injury rate, survival, and burrowing capability of lamprey following passage through the dredge system and used collection of lamprey from water without sediment as a control. The system used a hydraulic eductor (also known as a Venturi valve) to create suction so that sediment and lamprey avoided passage through the pump impeller. For the field test, lamprey were tagged with visible elastomer implants based on small (89 millimeter [mm] or less) and large (92 mm or more) size categories and stocked into mesh enclosures over fine or coarse sediment. The dredge was used inside each enclosure to collect lamprey and they were transported to the laboratory for evaluation and holding. The mean time to burrow was recorded for each study group (3 fine, 3 coarse, 3 controls) on the day of the field test; injury was evaluated at 24 hours; and survival was evaluated at 24 hours, and at 7 and 14 days after the test. The suction dredge collected 32 lamprey in fine sediment, 21 lamprey in coarse sediment, and 28 lamprey in the control group, including 30 lamprey that were not initially stocked. One lamprey died the day of the test (fine sediment) and 24 hours later, three lamprey were found to be injured (2 in fine and 1 in coarse sediment). No injuries or mortalities occurred in the control group. Lamprey burrowing performance was similar across the two treatment groups and the controls. The mean time for all fish in a group to burrow was highly variable. For all groups in a treatment combined, the mean burrow times were fastest for the fine treatment (9.8 minutes), followed by the controls (11.4 minutes) and the coarse treatment (11.6 minutes). The mean times to burrow for the main group of fish in each treatment group (those that burrowed in quick succession) were similar: 4.3 minutes for the fine group, 4.4 minutes for the coarse group, and 4.5 minutes for the controls. The laboratory test collected 147 lamprey (73 small and 74 large size category) from coarse sediment using the same procedures as the field test. One fish (small) was killed the day of the test, and six lamprey (3 small and 3 large) were found with injuries during the 24-hour exams. No mortalities were recorded 7 days after the test, when monitoring was terminated. The overall injury rate for the laboratory test was 4.1 percent and the mortality rate was 0.7 percent. Injuries in the field and laboratory tests were localized minor hemorrhages or red, irritated areas. The suction- dredge system appears to be a safe option to collect larval lamprey from sediment and will be a useful addition to lamprey assessment and salvage tools.
A two-year study (2013 and 2017) was conducted to determine if annual releases of hatchery rainbow trout (resident Oncorhynchus mykiss ) in the upper Cowlitz River Basin, Washington adversely affected anadromous fish in the basin. Rainbow trout tagged with radio transmitters were monitored after release to describe movement patterns, entrainment rates at Cowlitz Falls Dam, and survival. Additionally, trout that were radio-tagged in 2017 were monitored during spring 2018 to determine if any moved upstream and entered tributaries where winter steelhead (anadromous Oncorhynchus mykiss ) spawning occurs. A total of 580 hatchery rainbow trout (122 in 2013 and 458 in 2017) were radio-tagged and released at three release sites: (1) Cowlitz Falls Campground on Cowlitz River Arm of Lake Scanewa river kilometer (rkm) 155, (2) Cispus River Arm of Lake Scanewa rkm 1, and (3) Day Use Park on Cowlitz River Arm of Lake Scanewa rkm 146. Most radio-tagged trout (70 percent) remained within 6.4 rkm of the release site but some fish moved at least 25.7 rkm from the release site. The predominant movement direction was downstream. More than twice as many fish released at Cowlitz Falls Campground in 2017 (compared to the other two release sites) remained in the Cowlitz River, where potential overlap with steelhead occurs. A total of 28.3 percent of the study fish were entrained at Cowlitz Falls Dam. Apparent survival (time until movement ceased) for most tagged trout was fewer than 100 days from release in both years and no fish were detected moving during the spring following their release. In summary, hatchery rainbow trout released upstream from Cowlitz Falls Dam seem to remain primarily in Lake Scanewa or entrained at Cowlitz Falls Dam with few fish surviving to winter months. We found no evidence of hatchery trout interacting with steelhead in spawning tributaries during spring months. These results suggest that trout stocking in the upper Cowlitz River Basin poses minimal threat to anadromous fish in the basin.
We measured polychlorinated biphenyls (PCBs) in multiple age and size classes of Pacific sand lance ( Ammodytes personatus ), including eggs, young-of-the year, and adults to evaluate maternal transfer as a pathway for contaminant uptake and to add to the limited information on the occurrence of PCBs in sand lance in Puget Sound. Sampling was replicated at an urban embayment (Eagle Harbor) and a state park along an open shoreline (Clayton Beach), during spring and fall. Lipid-normalized concentrations of PCBs in sand lance at Eagle Harbor were 5–11 times higher than PCB concentrations in comparable samples at Clayton Beach. This was true for every life stage and size class of sand lance, including eggs removed from females. The same trend was observed in environmental samples. In Eagle Harbor, PCB concentrations in unfiltered water (0.19 ng/L), sieved (<63 μm) nearshore bed sediments (0.78 ng/g dw) and suspended particulate matter (1.69 ng/g dw) were 2–3 times higher than equivalent samples from near Clayton Beach. Sand lance collected in the fall (buried in sediment during presumed winter dormancy) had lower lipid content and up to four times higher PCB concentrations than comparably sized fish collected in the spring (by beach seine). Lipid content was 5–8% in spring fish and was reduced in fall fish (1–3%). Male sand lance had higher PCB concentrations than comparable females. All egg samples contained PCBs, and the lipid normalized egg/female concentration ratios were close to 1 (0.87–0.96), confirming that maternal transfer of PCBs occurred, resulting in sand lance eggs and early life stages being contaminated with PCBs even before they are exposed to exogenous sources. These life stages are prey for an even wider range of species than consume adult sand lance, creating additional exposure pathways for biota and increasing the challenges for mitigation of PCBs in the food web.
Larval lampreys ( Entosphenus tridentatus and Lampetra spp.) are vulnerable to anthropogenic water-level fluctuations that can dewater their habitat. Dewatering events occur regularly in the Columbia River Basin for operation and management of hydropower facilities, seasonal or maintenance closures of irrigation diversions, and in-water construction projects, including for habitat restoration. Salvage efforts which can be initiated before, during, and after dewatering events are resource-intensive and are conducted based on the assumption that salvage will reduce lamprey mortality. This pilot study was the first formal assessment of the efficacy of salvage efforts, evaluating the survival and performance of larval lamprey following various salvage techniques. Lampreys were salvaged during dewatering events at three field sites under variable environmental conditions (summer and fall of 2020) and then held in the laboratory for 60 days to monitor survival, growth, and burrowing performance. Four salvage treatments were defined to represent combinations of typical salvage techniques and stressors, including multiple passes of standard electrofishing (SEF), lamprey-specific electrofishing (LEF), and modified lamprey-specific electrofishing (MLEF; probes in direct contact with dewatered, but moist substrate) as well as extended exposure on the surface and walking on sediment where lampreys were burrowed. Control groups did not experience dewatering and were collected using LEF in areas away from treatment groups. Treatments were designed to increase in intensity, from treatment 1 (walking and exposure) to treatment 4 (multiple passes of SEF, LEF and MLEF). Study sites included an earthen hatchery rearing pond (North Toutle Hatchery) dewatered in July, and two irrigation diversions (Wapato and Sunnyside diversions on Yakima River) dewatered at the end of the irrigation season in October. Treatments were executed inside circular 1 m2 enclosures that were randomly positioned in habitats expected to be dewatered. A solid, weighted ring at the bottom of the enclosure penetrated the sediment and netting extended through the water column to a floating upper ring. We deployed eight enclosures per treatment at each test site, executed the four salvage treatments, collected lamprey from within each enclosure and transported them to the laboratory, along with the control groups, for the 60-day holding period. Burrowing performance was tested in sand 1 day after the field effort and in field-collected sediment 30 days after the field effort. Mortality was documented and lamprey were measured at 1, 30, and 60 days in the laboratory and fish weights were used to calculate standard growth rate (SGR) for each site and treatment group. We collected 328 larval lampreys at our three test sites, including 71 controls and 257 larvae exposed to dewatering and salvage treatments. Overall mortality for the 60-day laboratory holding period was 11.9%. Most mortality occurred within 1-day after treatment (51.3%) and there was limited mortality past 30 days (2.6%). At the North Toutle Hatchery, we observed substantial mortality during the field tests in July, both inside and outside of our test enclosures. Mortality within our test enclosures ranged from 96.7 to 98.8% for treatment 1, 45.9 to 52.2% for treatment 3 and 6.7 to 7.1% for treatment 4. The elevated mortality at this site and logistical challenges with the execution of treatments 1 and 2 resulted in few fish (5 total for treatment 1) or no fish (treatment 2) available for testing in the laboratory. Only one larval lamprey died during field tests at the Wapato and Sunnyside irrigation diversions during testing in October. The single mortality was in treatment 1 (11.1%) and no mortalities were observed outside of the test enclosures. We used logistic regression to estimate survival of larval lampreys transported to the laboratory and held for 24 h. The Wapato and Sunnyside field sites were pooled for logistic regression and the North Toutle Hatchery site was analyzed separately due to dramatically different environmental conditions. We found that treatment 1 reduced larval survival more than any other treatment during both the summer and fall dewatering events. Trends among survival for treatments 2-4 were less clear. The unique stressor included in the first treatment, but not in other treatments, was a 2-hour exposure period during which larvae were left lying on the surface of the sediment. Treatment 1 also experienced a walking action (foot pressure on the surface of the exposed sediment). The walking action was also included in treatment 4, both before and after dewatering, along with multiple passes of various electrofishing techniques, as this treatment was designed to be a worst-case scenario for lamprey salvage. Despite what appeared to be significant stressors associated with treatment 4, the logistic regression for survival up to 24 hours in the laboratory showed that the odds of surviving treatment 4 were 16 times higher than the odds of surviving treatment 1 at Wapato and Sunnyside (combined). The same comparison at the North Toutle Hatchery showed the odds were 226 times higher for lamprey to survive treatment 4 compared to treatment 1. Lamprey from all study sites initiated burrowing activity with median times less than 10.5 seconds in both sand (day 1) and field-collected sediment (day 30). The fastest burrowing start times were less than 1.0 second and the slowest was 3.2 minutes. Lamprey behavioral responses during burrowing ability tests were variable. Some lampreys immediately moved from the release location near the surface of the water toward the sediment and began burrowing while others swam around the aquarium near the surface of the water before exploring the sediment to select a burrowing location. The median time to complete burrowing for all treatment groups and sample periods ranged from 9.9 to 48.1 seconds. No significant differences in SGR were detected between treatment and control groups at any test site. Laboratory water temperatures for the North Toutle Hatchery study groups were maintained at 15°C, giving lamprey a growth advantage compared to the Wapato and Sunnyside groups which were maintained at 10℃. SGR for lamprey collected at the North Toutle Hatchery ranged from 0.83% weight gain/day for controls to 2.04%/day for treatment 3. SGR at Wapato ranged from 0.27 to 0.67%/day and from 0.60 to 0.90 %/day at Sunnyside. Overall, SGR was consistently lower at every site for the controls compared to any of the treatment groups, although none of the differences were significant. The variability at some sites in initial lamprey size, combined with inherent variability in growth rates, limited our ability to make conclusions about how different salvage treatments influenced SGR. Treatment 1 stood out among the salvage treatments at all study sites. In this treatment, lampreys exposed on the surface of the sediment, awaiting salvage, were vulnerable to reduced survival, even under mild environmental conditions. The risk of mortality was greatest for the summer dewatering event at the North Toutle Hatchery. The remaining treatments, even with multiple passes of various electrofishing techniques, did not generally have large negative impacts on lamprey during our tests. Lamprey survival rates for these treatments were relatively high, especially at the fall dewatering sites when environmental conditions were mild. Thus, salvage efforts, despite being resource intensive, likely have limited negative outcomes for larval lamprey and make substantial contributions to lamprey conservation efforts.
Puget Sound is a critical part of the Pacific Northwest, both culturally and economically. Eelgrass beds are an important feature of Puget Sound and are known to influence fish assemblages. As part of a larger site-characterization effort, and to gain a better understanding of the fish assemblages in Bellingham Bay, Washington, four eelgrass beds ( Zostera marina ) along the shoreline were surveyed. Fish were captured from 24 through 26 September 2019 by using three beach-seine hauls per eelgrass bed. In total, 12 hauls yielded 2,135 fish that comprised 20 species from 14 families. Shiner perch ( Cymatogaster aggregata ) accounted for 52 percent of the total catch. The other common species included three-spine stickleback ( Gasterosteus aculeatus ), bay pipefish ( Syngnathus leptorhynchus ), saddleback gunnel ( Pholis ornata ), Pacific staghorn sculpin ( Leptocottus armatus ), and Pacific sand lance ( Ammodytes personatus ). Total catch and species richness were highest at the two locations closest to the urban center of Bellingham; however, species diversity and evenness were highest at the two eelgrass beds farthest from the city center. Descriptions of fish assemblages in eelgrass beds are expected to be useful in the development of future process-based investigations by study partners and will focus on the movements of sediments and contaminants and their influence on biota.
Anthropogenic dewatering of aquatic habitats can cause stranding and mortality of burrowed larval lampreys; however, the effects of dewatering have not been quantified. We assessed: (a) changes in spatial distribution, abundance, and emergence of larvae dewatered at Leaburg Reservoir (OR); (b) emergence and mortality of larvae dewatered in a laboratory; and (c) bias, precision, and interpretation of field results by simulation and modeling of laboratory results. In the field, we examined the distribution, abundance (by N‐mixture model), and density of larvae by electrofishing at randomly selected sites before dewatering and after refill, and assessed the emergence rate by observation and excavation during dewatering. Due to dewatering in the field, about 42% of larvae emerged and spatial distribution changed toward sites dewatered less than 20 hours. Estimated average density decreased from 10.8 larvae/m 2 before dewatering to 2.3 larvae/m 2 after refilling, suggesting that abundance declined by 79%; simulation suggested this decline ranged 71–84% (interquartile range). In the laboratory, we examined the emergence and mortality rates of larvae dewatered 0–48 hrs. The emergence rate in the laboratory was similar to that in the field. Mortality rate increased with hours dewatered and was higher for emerged than burrowed larvae. Laboratory estimates of mortality rate predicted a 61% decline in abundance if only burrowed larvae survived and a 54% decline if both burrowed and emerged larvae survived. Abundance declines in the field could be from mortality (e.g., desiccation, predation) and relocation to watered habitat. Our results indicate dewatering can substantially affect spatial distribution and abundance of larval lampreys in freshwater ecosystems.
This document describes a standard operating procedure (SOP) for the preparation of purposely killed juvenile salmon, implanted with telemetry transmitters, to be released into rivers, lakes, or streams to test one of the survival model assumptions. Procedures for releases of purposely killed fish (hereinafter dead fish releases) were developed by staff from the U.S. Geological Survey’s Columbia River Research Laboratory, on the basis of laboratory experiments and practical experience with telemetry studies in the Columbia River Basin. Initially, we used extended exposure to high dose anesthetic baths to euthanize fish for dead fish releases. This approach was selected on the basis of euthanization procedures described in the literature for studies that required an effective and rapid procedure, such as stress physiology assessments. Ultimately, this technique was deemed insufficient because detection records suggested that some fish seemed to revive and continue their migration with limited effect. That is, the detection histories of dead fish were very similar to those of live fish. To overcome this challenge, we adapted our procedures to require a combination of euthanization procedures on individual fish to ensure that there was no opportunity for revival. A combination of euthanization procedures for dead fish releases was used in one study in Germany. This SOP has been used by the U.S. Geological Survey to test survival model assumptions in several field studies and has consistently performed well. In addition, limited laboratory tests were completed to ensure that no live juvenile salmon were found in holding tanks for 24 hours following the procedures described in this SOP.
Executive Summary A 2-year radiotelemetry study was completed to monitor the movements of adult winter steelhead ( Oncorhynchus mykiss ) in the upper Cowlitz River Basin. A reintroduction program was established to restore healthy and harvestable populations of steelhead because volitional access to the area was blocked in the 1960s after construction of dams in the lower river. A trap-and-haul program is used to move adult steelhead and salmon ( Oncorhynchus spp.) upstream, around the dams and large reservoirs, and release them in the upper basin to spawn naturally. Fish are released into Lake Scanewa, the uppermost reservoir in the system, and into the Cowlitz and Cispus Rivers. The goal of this study was to describe the behavior, movement, and tributary use of adult steelhead in the upper Cowlitz River Basin to assist in evaluating the trap-and-haul program and reintroduction program. We were specifically interested in learning more about the locations where steelhead spawn. Individual fish were assigned one of four fates, based on their location during the spawning period: Cowlitz River, Cispus River, Lake Scanewa, or fallback below the dam that impounds the reservoir. A total of 215 steelhead were tagged for the 2017–18 study. Of these, 5 fish regurgitated their transmitters before or shortly after release, so 210 tagged fish were used for analyses, including 121 fish (57.6 percent) released into the Cispus River and 89 fish (42.4 percent) released into Lake Scanewa. The Cowlitz River release site was not evaluated. Hatchery-origin (HOR) and natural-origin (NOR) steelhead were included in the study. Within the first 10 days after release, most steelhead had moved at least 2 river kilometers away from their release site. Fish released into Lake Scanewa, however, moved from their release site significantly sooner than fish released into the Cispus River, regardless of origin or sex. Most radio-tagged steelhead (93–100 percent) made no more than one trip between the reservoir and one of the rivers prior to spawning. Steelhead were predominantly assigned fates in the river closest to where they were released, but origin also played a role. Steelhead released into the Cispus River were assigned Cispus River fates more than 80 percent of the time, including both origins and both years. About 13 percent of NOR fish had fates in the Cowlitz River, but the proportion was lower for HOR fish (0–2 percent). Fallback was the least common fate for Cispus-released steelhead (three HOR fish in 2017), followed by the reservoir fate, ranging from 5 to 9 percent in 2017, and zero in 2018. The steelhead released into Lake Scanewa were almost exclusively NOR fish, which had primarily Cowlitz River fates (55–57 percent). We released only six HOR steelhead into Lake Scanewa, and they all had Cowlitz River fates. The reservoir fate was uncommon for both release sites, and it was consistently lower in 2018 compared to 2017. Flow conditions were higher in 2017, which may have affected steelhead movement patterns or timing. The three HOR steelhead released in the Cispus River in 2017 were the only fish that fell back over Cowlitz Falls Dam, which represented 1.4 percent of the total study fish, 5.7 percent of the Cispus-released fish in 2017, and 9.4 percent of the Cispus-released HOR fish in 2017. About 62 percent of the steelhead released in Lake Scanewa spawned in the Cowlitz River, with the remaining 38 percent in the Cispus River. Within the Cowlitz River, close to one-half (about 47 percent) of the fish spawned in the upper reach, and about 16 percent spawned in the lower reach. Steelhead released into Lake Scanewa that spawned in the Cispus River were minimal in reach 5 (4 percent) and distributed in approximately equal proportions in the middle (reach 6; 16 percent) and upper (reach 7; 18 percent) reaches. Steelhead released into the Cispus River spawned almost exclusively in the Cispus River (94 percent). The upper Cispus River reach (reach 7) was used by more fish (72 percent) than the middle Cispus reach (reach 6; 16 percent). Taken together, the upper Cowlitz River reach (reach 4) and upper Cispus River reach (reach 7) accounted for more than 71 percent of the spawning locations for radio-tagged steelhead. When the middle Cispus River reach (reach 6) is included with the upper reaches, they account for 87 percent of our described spawning sites. We described 12 tributaries in the Cowlitz River and 8 tributaries in the Cispus River where steelhead spawned. After spawning, about 53–63 percent of steelhead moved downstream as kelts, either being collected at Cowlitz Falls Dam or being detected downstream from the dam. More fish were collected from both release sites in 2018 compared to 2017. Across release sites and years, more NOR fish and females moved downstream as kelts. This study added to the understanding of the behavior and movement of adult steelhead in the upper Cowlitz River Basin, supporting the findings of previous studies in the basin and describing spawning sites in the system’s two main rivers and their tributaries. Future research efforts in this system may use additional telemetry studies, genetic analyses, and spawning ground surveys to provide further insights into the progress of the reintroduction effort.