Geology topics

Steven R. Chipps

Publications and source records attributed to Steven R. Chipps.

At least 37 records · Page 2Linked to original sources

USGS2020

Effect of water velocity and temperature on energy use, behaviour and mortality of pallid sturgeon Scaphirhynchus albus larvae

Natural reproduction of pallid sturgeon Scaphirhynchus albus has been limited for decades and a recruitment bottleneck is hypothesized to occur during the larval stage of development. In this study, we evaluated the effects of water velocity and temperature on the swimming activity, energy use, settling behaviour and mortality of endogenously feeding larvae. The swimming activity of drifting sturgeon larvae ( i.e. , fish exhibiting negative rheotaxis) increased at low water velocity. In subsequent experiments, we observed greater energy depletion and resultant mortality of larvae in no-flow environments (0 cm s −1 ) compared to tanks with water velocity ranging from 3.5 to 8.3 cm s −1 . The growth rate of drifting larvae was positively related to water temperature (18.7–23.3°C), but reduced growth rate at low water temperature (18.7°C) resulted in protracted development that extended average drift duration by ~4 days compared to larvae reared at 23.3°C. This study provides evidence that cooler summer water temperatures, characteristic of present-day conditions in the upper Missouri River, can reduce larval development and extend both the drift duration and distance requirements of S. albus . Moreover, if dispersed into low velocity environments, such as in reservoir headwaters, larvae may experience increased mortality owing to a mismatch between early life stage drift requirements and habitat conditions in the river. Manipulation of water releases to increase seasonal water temperature below dams may aid survival of S. albus larvae by shortening the time and distance spent drifting.

Journal of Fish Biology↗

USGS2020

Availability and timing of fathead minnow supplementation influence largemouth bass survival and production in rearing ponds

Adjustments to rearing practices should be justified with increases in production, stocking success, or angler satisfaction. Largemouth bass (Micropterus salmoides) production was assessed between hatchery ponds where fish were restricted to an invertebrate diet or received supplemental fathead minnow ( Pimephales promelas ) forage during 2015. At harvest, age-0 bass yield was 4.5 times greater and average fish length was 38 mm longer, in the pond that received fathead minnow. In 2016, a second study evaluated the timing of minnow supplementation that included earlier stockings of small fathead minnow (< 30 mm) compared to delayed supplementation with larger (> 30 mm) minnows. With earlier supplementation, bass yield was 2.3 times greater and fish averaged 14 mm longer at harvest. Bass survival was approximately 38% higher during 2015 when supplementation occurred and 25% higher during 2016 when minnow supplementation began earlier. Our findings show invertebrate forage was probably limiting bass production in hatchery ponds and supplementing with appropriately-sized fathead minnows increased age-0, largemouth bass production.

South Dakota↗

USGS2020

Effect of environmental factors on the movement of Rainbow Trout in the Deerfield Reservoir System

Spawning movements and the factors affecting those movements are often of interest to fisheries managers and biologists. The objective of this study was to examine the influence of environmental factors on the movements of an adfluvial Rainbow Trout Oncorhynchus mykiss population in the Black Hills, South Dakota. Three unique strains of hatchery-reared Rainbow Trout and resident Rainbow Trout were implanted with passive integrated transponder (PIT) tags and movements between Deerfield Reservoir and the Castle Creek tributary system were monitored from August, 2010-July, 2011. Initial adfluvial movements of Rainbow Trout were detected using a stationary PIT tag reader deployed near the mouth of Castle Creek. Multiple linear regressions were used to model the relationship between PIT tagged Rainbow Trout movement and water temperature, photoperiod, and discharge. Using Akaike’s information criterion (AIC) to compare models, discharge was the top supported model explaining variation in Rainbow Trout movement. Additionally, models containing temperature and photoperiod were also supported. Supported models only explained moderate levels of variation (<23%) in Rainbow Trout movement. Understanding how environmental variables affect the movement patterns of this unique population is essential in determining the proper management strategy for the Deerfield Reservoir system.

South Dakota↗

USGS2019

Influence of season, sex, age and diet composition on mercury concentration in Walleye Sander vitreus

We collected Walleye Sander vitreus (May–October) from Bitter and Twin lakes, South Dakota to assess seasonal- and diet-related variation in tissue mercury (Hg) concentration. The average Hg concentration in Walleye was 43–68% higher in the spring for Bitter ( p < 0.008) and Twin Lakes ( p < 0.017) compared with summer or autumn months. Bioenergetics analysis of Bitter Lake Walleye showed that consumption of fish prey (primarily Fathead Minnow Pimephales promelas ) increased from late summer through winter and was linked to increased Hg accumulation in Walleye the following spring. Mercury concentration varied significantly with Walleye age but was similar for comparably-aged male (0.62 μg/g) and female fish (0.62 μg/g). However, after adjusting for Walleye size (total length, mm), mean Hg concentration was greater in male (0.66 μg/g) compared with female (0.50 μg/g) fish, likely due to slower growth rate of male Walleye. At 425 mm, male Walleye in Bitter Lake were approximately 1 year older than female fish. These findings show that diet, age, and gender-related growth affect Hg concentration in Walleye and are important factors to consider in fish contaminant monitoring programs.

South Dakota↗

USGS2019

Comparison of aquatic invertebrate communities in near-shore areas with high or low boating activity

Lakeshore areas provide important habitat for aquatic invertebrates in shallow lakes. However, these zones are prone to anthropogenic disturbances that include shoreline development, urbanization, nutrient inputs, agricultural and(or) recreational use. Among recreational uses, public access sites are often developed to accommodate boaters and facilitate lake access via boat ramps. Although the ‘foot print’ associated with boat ramp structures can be relatively small compared to total shoreline coverage, little is known about the relative effects of boating activity on littoral zones and macroinvertebrate communities. In this study, we assess the relative impact of boating-related activities on aquatic macroinvertebrate communities at high-use (primary) and low-use (secondary) boat ramps on five glacial lakes of eastern South Dakota. Macroinvertebrate assemblages were dominated by few taxa that included Chironomidae, Corixidae, Caenidae, and Amphipoda. Moreover, boat ramp use did not influence abundance or diversity of aquatic macroinvertebrates. Habitat, specifically substrate composition, was also similar between primary and secondary boat ramps despite more intense use associated with primary boat ramps. Our results support related findings that aquatic invertebrate assemblages in the Prairie Pothole Region are structured by regional environmental variability (climate, habitat, and water quality) resulting in communities with characteristically low diversity and tolerant taxa. This may explain why small-scale disturbance associated with boating activity has no discernable effect on macroinvertebrate assemblages in glacial lakes of the Prairie Pothole Region.

South Dakota↗

USGS2019

Bioprocessed soybean meal replacement of fish meal in rainbow trout (Oncorhynchus mykiss) diets

This 125-day experiment evaluated the growth of adult rainbow trout ( Oncorhynchus mykiss ) fed one of three isonitrogenous and isocaloric diets (46% protein, 16% lipid). Fish meal was the primary protein source for the reference diet, which was compared to two other diets where bioprocessed soybean meal replaced 60% or 80% of the dietary fish meal. At the end of the experiment, there were no significant differences in gain, percent gain, feed conversion ratio, or specific growth rate among the dietary treatments. There were also no significant differences in intestinal morphology, splenosomatic index, hepatosomatic index, and viscerosomatic index among the diets. Based on these results, bioprocessed soybean meal can replace at least 80% of the fish meal in adult rainbow trout diets.

Cogent Food & Agriculture↗

USGS2019

Effects of exercise and bioprocessed soybean meal diets during rainbow trout rearing

Background: Alternative protein sources to fishmeal in fish feeds are needed. Objectives: Evaluate rearing performance of adult rainbow trout (Oncorhynchus mykiss) (initial weight 139.0 ±1.5 g, length 232.9 ± 0.8 mm, mean ± SE) fed one of the two isonitrogenous and isocaloric diets (46% protein, 16% lipid) and reared at one of the two levels of exercise (water velocities of either 3.6 cm/s or 33.2 cm/s). Methods: Protein in the control diet was based on fishmeal. In the experimental diet, bioprocessed soybean meal replaced approximately 60% of the fishmeal. Fish were fed by hand once-per-day to near satiation, and the food was increased daily. The experiment lasted 90-days. Results: There were no significant differences in gain, percent gain, or specific growth rate between the dietary treatments. However, the amount of food fed and feed conversion ratio was significantly lower in the 60% bioprocessed soybean meal diet. Intestinal morphology, relative fin length, splenosomatic index, hepatosomatic index, and viscerosomatic index were not significantly different in the trout fed either diet. Fish reared at 3.6 cm/s had a significantly lower feed conversion ratio (1.02 ± 0.02) than fish reared at 33.2 cm/s (1.13 ± 0.02). However, there were no significant differences in gain, percent gain, specific growth rate, or percentage mortality in fish reared with or without exercise. No significant interactions were observed between diet and exercise (higher water velocity). Conclusion:Based on these results, at least 60% of the fishmeal in adult rainbow trout diets can be replaced by bioprocessed soybean meal, even if higher water velocities are used to exercise the fish.

The Open Biology Journal↗

USGS2018

Historical sediment mercury deposition for select South Dakota, USA, lakes: implications for watershed transport and flooding

Purpose Select South Dakota, USA water bodies, including both natural lakes and man-made impoundments, were sampled and analyzed to assess mercury (Hg) dynamics and historical patterns of total Hg deposition. Materials and methods Sediment cores were collected from seven South Dakota lakes. Mercury concentrations and flux profiles were determined using lead ( 210 Pb) dating and sedimentation rates. Results and discussion Most upper lake sediments contained variable heavy metal concentrations, but became more consistent with depth and age. Five of the seven lakes exhibited Hg accumulation fluxes that peaked between 1920 and 1960, while the remaining two lakes exhibited recent (1995–2009) Hg flux spikes. Historical sediment accumulation rates and Hg flux profiles demonstrate similar peak and stabilized values. Mercury in the sampled South Dakota lakes appears to emanate from watershed transport due to erosion from agricultural land use common to the Northern Great Plains. Conclusions For sampled South Dakota lakes, watershed inputs are more significant sources of Hg than atmospheric deposition.

South Dakota↗

USGS2018

Species‐ and habitat‐specific otolith chemistry patterns inform riverine fisheries management

Geology and hydrology are drivers of water chemistry and thus important considerations for fish otolith chemistry research. However, other factors such as species and habitat identity may have predictive ability, enabling selection of appropriate elemental signatures prior to costly, perhaps unnecessary water/age‐0 fish sampling. The goal of this study was to develop a predictive methodology for using species and habitat identity to design efficient otolith chemistry studies. Duplicate water samples and age‐0 fish were collected from 61 sites in 4 Missouri River reservoirs for walleye Sander vitreus and one impoundment (Lake Sharpe, South Dakota) for other fishes (bluegill Lepomis macrochirus , black crappie Pomoxis nigromaculatus , gizzard shad Dorosoma cepedianum , largemouth bass Micropterus salmoides , smallmouth bass M. dolomieu , white bass Morone chrysops , white crappie P. annularis , and yellow perch Perca flavescens ). Water chemistry (barium:calcium [Ba:Ca], strontium:calcium [Sr:Ca]) was temporally stable, spatially variable, and highly correlated with otolith chemistry for all species except yellow perch. Classification accuracies based on bivariate Ba:Ca and Sr:Ca signatures were high (84% across species) yet varied between floodplain and main‐channel habitats in a species‐specific manner. Thus, to maximize the reliability of otolith chemistry, researchers can use species classifications presented herein to inform habitat selection (e.g., study reservoir‐oriented species such as white bass in main‐channel environments) and habitat‐based classifications to inform species selection (e.g., focus floodplain studies on littoral species such as largemouth bass). Overall, species and habitat identity are important considerations for efficient, effective otolith chemistry studies that inform and advance fisheries and aquatic resource management.

North Dakota, South Dakota↗

USGS2018

Dietary bioprocessed soybean meal does not affect the growth of exercised juvenile rainbow trout (Oncorhynchus mykiss)

Context : This 88-day experiment evaluated the rearing performance of juvenile rainbow trout ( Oncorhynchus mykiss ) fed one of three isonitrogenous and isocaloric diets and reared at velocities of either 2.3 or 18.7 cm s -1 . Objective : Evaluate the effects of diet and exercise during rainbow trout rearing. Design : Fishmeal was the primary protein source for one diet, with bioprocessed soybean meal (BSM) replacing either 60 or 85% of the fishmeal in the other two diets. Setting : This study was performed at Cleghorn Springs State Fish Hatchery in Rapid City, South Dakota, USA. Results : At the end of the experiment there were no significant differences among the dietary treatments in gain, percent gain, specific growth rate (SGR), or percent mortality. However, fish fed the fishmeal-based diet ate significantly more, experienced a significantly higher feed conversion ratio (FCR), and had a significantly higher hepatosomatic index than the fish fed the 85% BSM diet. Intestinal histology was not affected by the inclusion of BSM. Fish reared at 2.3 cm/s -1 had significantly lower FCRs, gain, percent gain, and SGR than the fish reared at 18.7 cm/ s -1 . There was a significant interaction in food consumed between diet and velocity, but no other significant interactions between the dietary and exercise treatments were observed. Conclusion : Based on these results, BSM can replace at least 85% of the fishmeal in juvenile rainbow trout, even if the fish are exercised.

South Dakota↗

USGS2018

Rearing performance of juvenile brown trout Salmo trutta fed a bioprocessed soybean meal diet with differing velocity regimes

This 121-day experiment evaluated the rearing performance of brown trout Salmo trutta fed one of two isonitrogenous and isocaloric diets (46% protein, 16% lipid) and reared at velocities of either 2.8 or 16.1 cm/s. Fishmeal was the primary protein source for the reference diet, which was compared to a bioprocessed soybean meal ingredient that replaced approximately 67% of the fishmeal in the experimental diet. At the end of the experiment, there were no significant differences in gain, percent gain, feed conversion rates, nor specific growth rates between the dietary treatments. There were also no significant differences in intestinal morphology, splenosomatic, hepatosomatic, and viscerosomatic indices related to diet composition. However, gain, percent gain, feed fed, and specific growth rate were all significantly greater in brown trout reared at the higher velocity. No significant differences in any of the other variables measured were observed between the velocity treatments. There were no significant interactions between diet and velocity in any of the variables. Based on the results of this study, bioprocessed soybean meal can replace at least 67% of the fish meal in brown trout diets, regardless of the rearing velocities used in this study. Higher rearing velocities are recommended to maximize juvenile brown trout growth rates.

Open Journal of Animal Sciences↗

USGS2018

Direct substitution of fishmeal with bioprocessed soybean meal in brown trout diets

This 121-day experiment evaluated the rearing performance of juvenile brown trout ( Salmo trutta ; initial weight 56.1±1.6 g, length 167.2±1.4 mm, mean ±SE) fed one of four isonitrogenous and isocaloric diets (46% protein, 16% lipid). Fishmeal, the primary protein source for the reference diet, was compared to diets where bioprocessed soybean meal directly replaced approximately 60, 80, or 100% of the dietary fishmeal. At the end of the experiment there were no significant differences in gain, percent gain, food fed, feed conversion ratio, nor specific growth rate among any of the dietary treatments. Gains for the 0, 60, 80, and 100% treatments were 304.6 ± 40.3 g, 215.4±82.6 g, 199.0±39.4 g, and 218.1±37.0 g, respectively. There were also no significant differences observed in intestinal morphology, relative fin lengths, viscerosomatic index, hepatosomatic index, or splenosomatic index among the dietary treatments. Based on these results, bioprocessed soybean meal may be able to replace 100% of the dietary fishmeal in juvenile brown trout diets without any deleterious effects.

Journal of Fisheries and Aquaculture Development↗

USGS2017

Fish Bioenergetics 4.0: An R-based modeling application

Bioenergetics modeling is a widely used tool in fisheries management and research. Although popular, currently available software (i.e., Fish Bioenergetics 3.0) has not been updated in over 20 years and is incompatible with newer operating systems (i.e., 64‐bit). Moreover, since the release of Fish Bioenergetics 3.0 in 1997, the number of published bioenergetics models has increased appreciably from 56 to 105 models representing 73 species. In this article, we provide an overview of Fish Bioenergetics 4.0 (FB4), a newly developed modeling application that consists of a graphical user interface (Shiny by RStudio) combined with a modeling package used in the R computing environment. While including the same capabilities as previous versions, Fish Bioenergetics 4.0 allows for timely updates and bug fixes and can be continuously improved based on feedback from users. In addition, users can add new or modified parameter sets for additional species and formulate and incorporate modifications such as habitat‐dependent functions (e.g., dissolved oxygen, salinity) that are not part of the default package. We hope that advances in the new modeling platform will attract a broad range of users while facilitating continued application of bioenergetics modeling to a wide spectrum of questions in fish biology, ecology, and management.

Fisheries Magazine↗

USGS2017

Growth potential and habitat requirements of endangered age-0 pallid sturgeon (Scaphirhynchus albus) in the Missouri River, USA, determined using a individual-based model framework

An individual-based model framework was used to evaluate growth potential of the federally endangered pallid sturgeon ( Scaphirhynchus albus ) in the Missouri River. The model, developed for age-0 sturgeon, combines information on functional feeding response, bioenergetics and swimming ability to regulate consumption and growth within a virtual foraging arena. Empirical data on water temperature, water velocity and prey density were obtained from three sites in the Missouri River and used as inputs in the model to evaluate hypotheses concerning factors affecting pallid sturgeon growth. The model was also used to evaluate the impacts of environmental heterogeneity and water velocity on individual growth variability, foraging success and dispersal ability. Growth was simulated for a period of 100 days using 100 individuals (first feeding; 19 mm and 0.035 g) per scenario. Higher growth was shown to occur at sites where high densities of Ephemeroptera and Chironomidae larvae occurred throughout the growing season. Highly heterogeneous habitats (i.e., wide range of environmental conditions) and moderate water velocities (0.3 m/s) were also found to positively affect growth rates. The model developed here provides an important management and conservation tool for evaluating growth hypotheses and(or) identifying habitats in the Missouri River that are favourable to age-0 pallid sturgeon growth.

Ecology of Freshwater Fish↗

USGS2017

Development of a foraging model framework to reliably estimate daily food consumption by young fishes

We developed a foraging model for young fishes that incorporates handling and digestion rate to estimate daily food consumption. Feeding trials were used to quantify functional feeding response, satiation, and gut evacuation rate. Once parameterized, the foraging model was then applied to evaluate effects of prey type, prey density, water temperature, and fish size on daily feeding rate by age-0 (19–70 mm) pallid sturgeon ( Scaphirhynchus albus ). Prey consumption was positively related to prey density (for fish >30 mm) and water temperature, but negatively related to prey size and the presence of sand substrate. Model evaluation results revealed good agreement between observed estimates of daily consumption and those predicted by the model ( r 2 = 0.95). Model simulations showed that fish feeding on Chironomidae or Ephemeroptera larvae were able to gain mass, whereas fish feeding solely on zooplankton lost mass under most conditions. By accounting for satiation and digestive processes in addition to handling time and prey density, the model provides realistic estimates of daily food consumption that can prove useful for evaluating rearing conditions for age-0 fishes.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2016

Impacts of Northern Pike on stocked Rainbow Trout in Pactola Reservoir, South Dakota

Establishment of nonnative Northern Pike Esox lucius in Pactola Reservoir, South Dakota, has prompted concern among biologists about the influence of this species on the lake’s intensively managed salmonid fisheries. Ancedotal information suggests that catch rates of Rainbow Trout Oncorhynchus mykiss have declined while mean size and abundance of Northern Pike has increased, although quantitative information on diet and growth of the Northern Pike population is lacking. To address potential interactions between Northern Pike and Rainbow Trout, we assessed size-dependent predation by Northern Pike on Rainbow Trout and determined the relative energetic contribution of stocked Rainbow Trout to Northern Pike growth using bioenergetics modeling. Stable isotopes combined with traditional diet analyses revealed that smaller Northern Pike (<600 mm TL) consumed primarily centrarchids and Rainbow Smelt Osmerus mordax , and Rainbow Trout contributed less than 10% to their annual energy consumption. In contrast, larger Northern Pike (≥600 mm TL) consumed primarily Rainbow Trout, which accounted for 56% of their annual energy consumption. Combining estimates of Northern Pike predation with production costs of catchable-size Rainbow Trout revealed that annual economic losses ranged from US$15,259 to $24,801 per year. Over its lifespan, an age-10 Northern Pike was estimated to consume ~117 Rainbow Trout worth approximately $340. Thus, Northern Pike predation substantially influences salmonid management initiatives and is likely a primary factor contributing to reduced Rainbow Trout abundance and return to anglers in Pactola Reservoir. Strategies for reducing Northern Pike predation on Rainbow Trout include increasing the size of stocked fish or altering the timing and spatial distribution of stocking events.

South Dakota↗

USGS2016

Community fisheries in eastern South Dakota: Angler demographics, use, and factors influencing satisfaction

We surveyed anglers on five community fishing lakes near Brookings, South Dakota to assess angler use and satisfaction. The community lakes attracted younger anglers when compared to statewide and national averages. Overall, satisfaction was generally high (74%) among anglers fishing community lakes. Logistic regression analysis showed that harvest rate, anglers targeting trout, familiarity with the lake, adults fishing with children, and fishing during open water periods were significantly related to angler satisfaction. Angler parties consisting of adults fishing with children were 1.7 times more likely to respond as “satisfied” compared with adults-only angler groups. Fishing opportunities provided by community lakes can enhance participation by younger anglers while simultaneously providing family-oriented recreation (i.e., adults fishing with children) that enhances trip satisfaction.

Human Dimensions of Wildlife↗

USGS2016

Influence of Didymosphenia geminata blooms on prey composition and associated diet and growth of Brown Trout

We compared diet, stomach fullness, condition, and growth of Brown Trout Salmo trutta among streams with or without blooms of the benthic diatom Didymosphenia geminata in the Black Hills, South Dakota. In Rapid Creek, where D. geminata blooms covered ∼30% of the stream bottom, Brown Trout consumed fewer ephemeropterans (6–8% by weight) than individuals from two stream sections that have not had D. geminata blooms (Castle and Spearfish creeks; 13–39% by weight). In contrast, dipterans (primarily Chironomidae) represented a larger percentage of Brown Trout diets from Rapid Creek ( D. geminata blooms present; 16–28% dry weight) compared with diets of trout from streams without D. geminata blooms (6–19% dry weight). Diets of small Brown Trout (100–199 mm TL) reflected the invertebrate species composition in benthic stream samples; in Rapid Creek, ephemeropterans were less abundant whereas dipterans were more abundant than in streams without D. geminata blooms. Stomach fullness and condition of Brown Trout from Rapid Creek were generally greater than those of Brown Trout from other populations. Linkages among invertebrate availability, diet composition, and condition of Brown Trout support the hypothesis that changes in invertebrate assemblages associated with D. geminata (i.e., more Chironomidae) could be contributing to high recruitment success for small Brown Trout in Rapid Creek.

Transactions of the American Fisheries Society↗