Geology topics

Steven R. Chipps

Publications and source records attributed to Steven R. Chipps.

At least 19 recordsLinked to original sources

USGS2026

The Great Lakes aquatic tissue analysis repository (GLATAR)

Empiricists and modellers use information on energy density, proximate composition, stable isotopes, fatty acids, thiamine, and bioaccumulative tracers (e.g., PCBs and mercury) to understand the state and inter-relationships of aquatic food webs. Data exist in many published and unpublished sources, but are not consolidated in an easily accessible database that would serve as a vital resource to i) provide basic estimates of these diet-derived measures of body composition, ii) understand sources of variation in the underlying data, iii) facilitate exploration and development of data proxies, and iv) assist in study design. We designed GLATAR (Great Lakes Aquatic Tissue Analysis Repository, glatar.org ) to address this need. GLATAR is an open-access, searchable database linked to a web-based toolbox to visualise and generate user-defined summaries on diet-derived ecological metrics, with a focus on taxa of importance to the Great Lakes. GLATAR currently contains over 50,000 records on energy density, chemical tracers, and proximate body composition from 67 species of fish and 72 invertebrate taxa. We hope this user-friendly interface will entice others to upload their published and unpublished data to the repository, enriching the breadth of data accessible to researchers. In this way, GLATAR will become a ‘living’ and interactive resource for empiricists and modellers working in freshwater ecosystems as they make critical decisions related to growth, production, and consumption across a diverse group of economically and ecologically important aquatic species.

Journal of Great Lakes Research↗

USGS2026

Mechanisms of Devils Lake’s responses to recent climatic wetting: Insights from a physically based hydrologic model

Study region Devils Lake Basin of the Northern Great Plains (NGP) region, North Dakota, USA Study focus Understanding the mechanism of Devils Lake’s responses and basin-wide hydrologic change under a wet-climatic regime using a process-based and cold region hydrologic model. New hydrologic insights Model results illustrate that three distinct hydroclimatic periods occurred during the study: Water Years 2002–05, 2006–11, and 2012–18. Following a brief time of contraction and growth, the latter two periods provide a complete picture of a wetting to drying cycle during an overall wetting regime. From 2006–2011, Devils Lake (DL) grew primarily due to lateral inflow, driven by strong precipitation and high frozen soil content leading up to the 2011 floods. In addition, during wet years, the snowmelt streamflow from the eastern and central parts of the DL Basin contributes significantly to lake growth compared to the western part. By contrast, from 2012 to 18, DL entered a contraction period, dominated by evaporation losses and anthropogenic flood control operations. Contributors to upstream drying included low precipitation, minimal snowpack accumulation, slightly lower frozen soil ratios, and minimal snowmelt runoff.

North Dakota↗

USGS2026

Using eye lens stable isotopes to identify the rearing origin of fall age-0 walleye ( Sander vitreus )

Isotope values in fish eye lenses may be useful in differentiating rearing origins. We compared eye lens isotopic values of fall fingerling age-0 walleye ( Sander vitreus ) reared in a hatchery pond, a recirculating aquaculture system (RAS), and a natural lake. Using 10 fish per rearing source, we delaminated layers from one eye lens per fish to assess temporal changes in carbon (δ 13 C) and nitrogen (δ 15 N) and pulverized the whole second eye lens for δ 13 C, δ 15 N, and sulfur (δ 34 S). RAS-reared walleye values exhibited high precision among individuals and were δ 34 S enriched. Pond-reared walleye had lower δ 13 C and δ 15 N core values compared to other rearing sources. For δ 13 C and δ 15 N, values remained consistent among layers for RAS-reared walleye, δ 15 N slightly increased for pond-reared and lake-reared walleye, and δ 13 C increased substantially among subsequent layers in pond-reared walleye. Bayesian 95% ellipses did not overlap among rearing sources. These results demonstrate that eye lens stable isotope analysis may be a useful tool for differentiating hatchery-reared and wild large fingerling walleye, specifically from RAS- and pond-reared sources.

South Dakota↗

USGS2025

Predicting aquatic habitat connectivity across watershed boundaries: Implications for interbasin spread of nonindigenous aquatic species.

Understanding habitat connectivity is critical for managing nonindigenous aquatic species (NAS) spread. Dams and watershed boundaries can be impassable to NAS during typical conditions but may become temporarily passable during flooding. The goal of our project was to develop an approach for identifying locations of aquatic connectivity at a fine spatial scale along watershed boundaries using readily available data. To develop this approach, we focused on the potential for range expansion of invasive fish in the United States via possible cross-boundary habitat connections. First, we developed an index using metrics of elevation, watershed size, and geology at regular points along a watershed boundary to stratify points by likelihood of connectivity during high precipitation (>20 mm of precipitation in a 3-day period). We then used a subset of points across a gradient of connectivity likelihoods to gather Landsat-derived observed surface water data and developed a statistical model to predict surface water presence from landscape characteristics. We applied the model throughout the entire watershed boundary to identify locations of hydrologic connectivity during high-water events. The presence of surface water on watershed boundaries was predicted by the interactions between watershed boundary point elevation relative to the minimum adjacent HUC-12 elevations and watershed boundary point elevation relative to neighboring point elevations (marginal R 2 = 0.94). Our approach can be used to identify potential areas of surface water connectivity between watersheds quickly and easily at a fine spatial scale using readily available, remotely sensed data that can inform conservation and management actions across disciplines.

North Dakota, South Dakota↗

USGS2025

Reproductive characteristics and spawning potential ratio modeling of a vulnerable riverine specialist in the lower unchannelized Missouri River, USA

Reproductive characteristics for populations of imperiled, non-game species are not regularly studied but may be important for identifying factors associated with their population sustainability. Understanding reproductive traits of vulnerable species, particularly long-lived species, may provide insight for implementing management actions to respond to potential overharvest. This study aimed to assess the reproductive characteristics of a stable population of long-lived blue suckers ( Cycleptus elongatus ) in the unchannelized Missouri River in South Dakota. We obtained demographic information and gonads from 182 blue suckers collected in trammel nets in March 2021 and 2022. We used Bayesian generalized linear mixed-effects models to assess length and weight relationships with gonadosomatic index (GSI) and fecundity and used spawning potential ratios to model the influence of four minimum length limit scenarios. Total lengths of sampled fish ranged from 560 to 821 mm. Female GSI increased with length to ∼730 mm before declining, and male GSI remained consistent across lengths. Fecundity increased linearly with weight and with length to around 750 mm, after which the rate of increase slowed. Using a recent natural mortality estimate for this population, the spawning potential ratio under current no-limit regulations decreased rapidly as fishing mortality approached 0.10 but implementing a minimum length limit (e.g. 610- or 660 mm) could prevent the spawning potential ratio from falling below acceptable limits (0.2–0.3) at moderate-to-high fishing mortality values. This study provides necessary information about the reproductive characteristics of vulnerable, non-game species and demonstrates how spawning potential ratio modeling can be used for species that receive less management focus.

Nebraska, South Dakota↗

USGS2024

Effects of exploitation and emigration on apparent survival of Walleye in Lake Sharpe, South Dakota

Objective In 2017, we began a 5-year mark–recapture study to estimate apparent survival of Walleye Sander vitreus and angler exploitation in Lake Sharpe, South Dakota, and inform management strategies for this fishery. The study revealed substantial downstream emigration of Walleye; therefore, we also examined the influence of emigration on apparent mortality. Methods We estimated Walleye apparent survival using the Seber parameterization of the dead recovery model. In our models, we included factors influencing voluntary fish release, as well as harvest restrictions, tagging location, and year. We used a multistate Markov model to estimate emigration in relation to Walleye total length, sex, and tagging location, as well as annual reservoir discharge. The exploitation and emigration estimates informed our interpretations of annual Walleye apparent survival. Result Apparent survival patterns were explained by an interaction between Walleye length and a minimum harvest length restriction. Apparent survival was lower during July and August, when the minimum harvest length limit was suspended, and results suggest that anglers were willing to release preferred sizes (≥508 mm) when able to harvest smaller (<381 mm) Walleye. Annual apparent survival, exploitation, and emigration estimates ranged between 15% and 47%, 8% and 25%, and 11% and 28%, respectively. Emigration was influenced by tagging location and annual discharge: increasing with proximity to Big Bend dam and during high annual flows. Although years with high exploitation or emigration corresponded to years with low apparent survival, estimates did not explain the magnitude of mortality or emigration indicated by survival models. Conclusion Our results revealed that harvest–release decisions by Walleye anglers in Lake Sharpe are primarily influenced by regulations, although exploitation was not a significant source of mortality. Annual patterns in apparent survival indicate high mortality or emigration. Continued investigations into immigration and emigration and sources of mortality of Lake Sharpe Walleye are warranted to better inform management strategies for the fishery.

South Dakota↗

USGS2024

Importance of a lake-wetland complex for a resilient Walleye fishery

Wetlands serve as unique habitats that can support high biodiversity. Large-scale loss of wetland habitats can threaten important linkages between lake and wetland habitats that could affect diversity and growth of aquatic organisms. In this study, we compare prey diversity and abundance as well as Walleye ( Sander vitreus ) diets and condition in a large glacial lake (Lake Kampeska, South Dakota) with a connected wetland to better understand seasonal changes in the benefits provided by each habitat. We examined seasonal differences (spring, summer, and fall) through two years (summer 2021 through fall 2022) between the habitats using prey fish catch per unit effort, richness, Shannon diversity, and Bray–Curtis dissimilarity as well as Walleye relative weight, percent of empty stomachs, diet weight, stomach fullness, diet energy, and diet taxa importance. The prey fish community was more diverse and abundant in the wetland, and Walleye consumed more prey (by weight) in the wetland during all seasons except spring. Wetland reconnection can be a tool for managers to improve water quality while providing seasonal habitat needs for fish. Additionally, the diversity of prey resources provided by wetlands, many of which are unique, support resilience in the face of ecological change. Protection of wetlands may be critical for maintaining healthy and resilient fisheries into the future.

South Dakota↗

USGS2024

Fish bioenergetics modeling

A bioenergetics model for a fish is defined as a quantitative description of the fish's energy budget. Bioenergetics modeling can be applied to free-ranging fish in rivers, lakes, and oceans to estimate annual food consumption by fish populations; such applications have proven useful in managing fisheries. In addition, bioenergetics models have been used to better understand fish growth and consumption in ecosystems, to guide conservation management of endangered or threatened fish populations, to determine the importance of the role of fish in cycling nutrients within ecosystems, to predict fish growth and consumption under climate change , and to identify the important factors regulating contaminant accumulation in free-ranging fish. Over the past 60 years, fish bioenergetics modeling has led to significant advancements in both aquatic ecology, especially fish ecology, and fisheries management.

Book chapter↗

USGS2024

Water-level changes impact angler effort in a large lake: Implications for climate change

Climate change is expected to influence aquatic habitats and associated fish populations, yet we know little about the impact on recreational anglers. Our goal was to explore whether interannual fluctuations in waterbody surface area and other explanatory variables could be used as indicators of changes in angler fishing effort. Our approach leveraged a combination of remotely sensed waterbody surface area, environmental and fish population data, and onsite angler survey monitoring data for Devils Lake, North Dakota, USA during the open-water fishing period (May 1st to August 31st) for 9 years (1992–2021). The information was used to develop a dynamic waterbody size-angler effort model. Changes in waterbody surface area reliably predicted changes in angler effort (r 2 = 0.60). Increases in waterbody surface area led to increases in angler effort, and decreases in waterbody surface area led to decreases in angler effort. Our findings show promise that remotely sensed fluctuations in waterbody surface area could be used as an indicator of interannual angler effort dynamics. Dynamic waterbody size-angler effort models could provide managers the ability to predict changes in angler effort via climate-related hydrological cycles that affect the size and distribution of waterbodies on the landscape.

North Dakota↗

USGS2023

Receiver mount design, transmitter depth, and wind speed affect detection probability of acoustic telemetry transmitters in a Missouri River tributary

One of the most important considerations for acoustic telemetry study designs is detection probability between the transmitter and the receiver. Variation in environmental (i.e., wind and flow) and abiotic (i.e., bathymetry) conditions among aquatic systems can lead to differences in detection probability temporally or between systems. In this study we evaluate the effect of distance, receiver mount design, transmitter depth, and wind speed on detection probabilities of two models of acoustic transmitters in a mid-sized river. InnovaSea V16-6H (hereafter V16) and V13-1L (hereafter V13) tags were deployed in the James River, SD at 0.36 m (deep) and 2.29 m (V16 tag) or 1.98 m (V13 tag; shallow) above the benthic surface downstream of InnovaSea VR2W stationary receivers at distances of 100, 200, or 300 m. We used two receiver mount designs that included a fixed position within a PVC pipe on the downstream side of a bridge piling or a metal frame deployed in the middle of the river channel. Tags were deployed for 72 h at each location, and hourly detections were summarized. We evaluated downstream distance, receiver mount design, tag depth, and wind effects on tag detection using Bayesian logistic regression.

South Dakota↗

USGS2023

Effect of feeding history on metabolic rate of largemouth bass (Micropterus nigricans): implications for bioenergetics models

Metabolic rate is a key parameter in fish energy budgets that strongly influences the output of bioenergetics models. In this study, we tested the hypothesis that metabolic rate varies with growth history of age-1 largemouth bass Micropterus nigricans Cuvier, 1828. Two groups of fish were fed alternating maintenance or ad libitum rations of fathead minnow Pimephales promelas Rafinesque, 1820, so that over a 9-week period, initial and ending size of fish was similar. After 9 weeks, oxygen consumption was measured using static, closed respirometry. Although final body weight was similar between the two groups (means, 104–108 g), specific oxygen consumption for fish fed maintenance rations (0.094 mg O 2 g −2 h −1 ) was 38% less than that measured for fish fed ad libitum (0.152 mg O 2 g −2 h −1 ). Bioenergetics estimates of food consumption were similar to observed values for fish fed ad libitum (∼7% error), but for fish fed maintenance rations, the model overestimated food consumption by 65%. By accounting for changes in metabolic rate owing to reduced feeding, error in model estimates of food consumption was reduced. These findings shed new insight into factors associated with consumption-dependent error in bioenergetics models and highlight the importance of feeding history on metabolic rate of fish. Incorporating growth-dependent metabolism into bioenergetics models can improve model accuracy and allow fisheries biologists to make more informed decisions regarding fish growth and energetics.

Canadian Journal of Zoology↗

USGS2022

Effects of capture depth on walleye hooking mortality during ice fishing

Length-based regulations are a common tool used to limit fishing mortality by controlling the size of fish harvested. While such regulations are helpful in managing fish populations, mortality associated with catch-and-release fishing may negatively impact a fishery. We evaluated factors affecting hooking mortality of walleye ( Sander vitreus ) in 2 mainstem Missouri River reservoirs in South Dakota. Winter walleye hooking mortality was evaluated during the ice fishing season in February and March 2020. After capture, walleye ( n = 55) were placed into holding pens for 12 to 72 h to monitor postrelease mortality. Hooking mortality was found to be 20% following angling. Capture depth, landing time, and time in pen were the most influential variables on probability of hooking mortality ( p m ). We observed a sharp increase in p m for walleye captured at depths from 10 to 12 m, where the probability of mortality for fish increased appreciably from 5 to 37%, respectively. Our findings indicate that hooking mortality during the ice fishing season can be substantial in lakes where walleye angling occurs at depths greater than 10 m.

South Dakota↗

USGS2022

Density-dependent and environmental influences on juvenile walleye Sander vitreus (Mitchill) survivorship in northern Wisconsin lakes

Walleye, Sander vitreus (Mitchill), natural recruitment has declined in northern Wisconsin lakes over time. Age-0 and age-1 walleye relative abundance (catch per unit effort; CPE) data from northern Wisconsin (1986–2019) were used to test for abiotic (i.e. lake characteristics and temperature variables) and biotic (age-0 and age-1 CPE) factors influencing age-0 to age-1 walleye mortality. Age-0 to age-1 walleye mortality was elevated at high age-0 CPE and variable at low age-0 CPE, which indicated strong density-dependence. Environmental factors such as spawning and ontogenetic phenology (climate change and ice-off dates), trophic mismatches, and metabolic and consumptive demand influenced age-0 to age-1 walleye mortality less strongly. Elevated age-0 to age-1 walleye mortality at low age-0 CPE supports previous findings of depensatory recruitment dynamics in northern Wisconsin walleye populations. Additional research is needed to address elevated juvenile walleye mortality at low adult stock sizes and/or with declining natural recruitment to inform management decisions.

Wisconsin↗

USGS2022

The cost of avoiding predators: A bioenergetic analysis of diel vertical migration by the opossum shrimp Mysis diluviana

The freshwater opossum shrimp Mysis diluviana can undergo extensive diel vertical migration (DVM) to feed in shallow, prey rich strata at night. Bright moonlight limits their night-time migration presumably due to predator avoidance. Using a linked, foraging-bioenergetics model, we evaluated the cost of avoiding predators by simulating the effects of prey density, water temperature, and light intensity on daily feeding and growth of M. diluviana in Lake Pend Oreille, Idaho, USA. We found that when mysid distribution was not limited by moonlight intensity, simulated food consumption (10.3 J day −1 ) increased 1.6-fold compared to estimated consumption (6.1 J day −1 ) based on their observed, vertical distribution. Moreover, simulated growth of mysids (0.61 mg day −1 ) increased 74% compared to that estimated from observed distribution patterns (0.35 mg day −1 ), when they were located in deeper, darker strata. Given recent insights into partial DVM by M. diluviana , we note that proximate factors associated with predator avoidance in pelagic (light availability) and benthic (hunger level, body size and reproductive status) habitats may convey complimentary benefits to M. diluviana fitness by reducing predation mortality and increasing metabolic efficiency.

Idaho↗

USGS2022

Effects of seasonal hypoxia on macroinvertebrate communities in a small reservoir

Localized hypoxia can reduce available habitat, restrict movement and limit the abundance of aquatic invertebrates. Cultural eutrophication coupled with the effects of climate change is likely to increase the frequency and extent of hypoxia in aquatic ecosystems, yet little is known about how oxygen gradients in small reservoirs influence spatial distribution and abundance of aquatic invertebrates. We evaluated the effects of environmental and biological attributes on seasonal and spatial variation of macroinvertebrates and explored how hypoxic conditions influenced littoral, benthic and pelagic macroinvertebrate communities in Lake Alvin, South Dakota. We collected data on reservoir conditions in conjunction with macroinvertebrate sampling from May to October, 2009-2011 and applied an information theoretic approach to evaluate factors affecting invertebrate abundance. Hypoxic conditions were present from May to September in the lacustrine zone impacting 10─39% of the water column. Benthic invertebrates were typically absent from the lacustrine zone during periods of severe hypoxia and were most abundant in the shallow, well-oxygenated riverine zone. Littoral invertebrates were negatively related to percent of the water column that was hypoxic suggesting that fish, confined to shallow water by hypoxia, may be consuming a larger portion of littoral invertebrates in their diets. Cladocera and Copepoda densities were influenced primarily by water depth and monthly precipitation. The larger size of Daphnia found in the hypoxic-prone transitional and lacustrine zones suggest that low oxygen concentration may provide a refuge from fish predation. This study demonstrated that spatial variation in near-bottom oxygen concentrations were important predictors of macroinvertebrate and zooplankton abundance and size structure in Lake Alvin and that macroinvertebrates, particularly benthic and littoral invertebrates, could benefit from measures taken to reduce summer hypoxia.

South Dakota↗

USGS2021

The local responses of aquatic ecosystems to adjacent grassland conservation: Can streams of dreams exist in a degraded riverscape?

Landscape homogenization and the removal of riparian areas have altered stream ecosystems worldwide. Numerous conservation programmes attempt to improve water quality and increase instream habitat heterogeneity to elicit desired biological responses. However, the effectiveness of many conservation efforts on isolated stream fragments remains unknown, especially in grassland regions. The effects of grassland conservation practices and the re-establishment of riparian corridors in the James River basin, South Dakota (USA) on stream water quality, habitat availability and aquatic macroinvertebrate and fish assemblages were studied in an agriculturally dominated prairie landscape. Grassland conservation efforts may have repaired riparian condition, reduced turbidity and created more diverse instream habitat complexes at conservation sites based on comparisons with paired reference reaches. Reference sites were relatively homogeneous, with prevalent siltation, bank erosion and disturbances to the riparian vegetation. Owing to significant riparian vegetation development, overhanging and aquatic vegetation, benthic detritus and woody materials were significantly more common at conservation reaches. Restoration efforts that assume ‘if you (re-)build it, they will come’ (i.e. the ‘field of dreams’ hypothesis) underestimate other important barriers to biodiversity restoration in dynamic, grassland riverscapes. Although aquatic organisms in grassland ecosystems are adapted to rapidly inhabit available habitats, the development of niche space at conservation reaches did not directly result in colonization by aquatic life. Grassland management actions did not address stream connectivity issues or overcome land use influences elsewhere in the riverscape that may govern the responses of aquatic macroinvertebrates and fish. Stream fragmentation and continuing, damaging land use patterns seemed to exceed the positive effects of restoring isolated stream reaches in these heavily degraded catchments. Catchment-scale management strategies that combine reach-level restoration actions with efforts to improve connectivity are likely to be more successful in degraded riverscapes.

South Dakota↗

USGS2021

Time to refine mercury mass balance models for fish

Mercury mass balance models (MMBMs) for fish are powerful tools for understanding factors affecting growth and food consumption by free-ranging fish in rivers, lakes, and oceans. Moreover, MMBMs can be used to predict the consequences of global mercury reductions, overfishing, and climate change on mercury (Hg) concentration in commercially and recreationally valuable species of fish. Such predictions are useful in decision-making by resource managers and public health policy makers, because mercury is a neurotoxin and the primary route of exposure of mercury to humans is via consumption of fish. Recent evidence has emerged to indicate that the current-day version of MMBMs overestimates the rate at which fish eliminate mercury from their bodies. Consequently, MMBMs overestimate food consumption by fish and underestimate Hg concentration in fish. In this perspective, we explore underlying reasons for this overestimation of Hg-elimination rate, as well as consequences and implications of this overestimation. We highlight emerging studies that distinguish species and sex as contributing factors, in addition to body weight and water temperature, that can play an important role in how quickly Hg is eliminated from fish. Future research directions for refining MMBMs are discussed.

Facets↗

USGS2020

Effects of density reduction on age-specific growth of stream-dwelling Brown Trout

Density-dependent growth has been well documented among stream-dwelling Brown Trout Salmo trutta populations. In Spearfish Creek, South Dakota, biomass of adult Brown Trout (>200 mm) is about three times greater than that reported for similar Black Hills streams, whereas the mean length of adult fish is about 30% less. Here, we evaluate density reduction as a management tool for improving the growth rate of stream-dwelling Brown Trout. We compared age-specific growth of wild Brown Trout in stream sections receiving 50% reductions in fish abundance (removal sections) to that of fish in sections containing natural densities (control sections). Annual growth in length and weight of older Brown Trout (age > 2) was greater in removal sections compared to control sections, particularly among fish between 230 and 280 mm TL (ages 3–4). We attribute the growth response to constraints imposed by food availability and the strong feeding hierarchies, characteristic of larger (older) Brown Trout. Data collected from PIT-tagged fish that were recaptured 2 years after fish removal efforts revealed that growth responses owing to density reduction likely did not extend beyond 1 year. Nonetheless, among cohorts that showed improved growth after the first year, we found that their growth advantage was sustained into the second year. At removal sections, age-3 and older Brown Trout that experienced greater growth after 1 year were larger than fish from control sections 2 years later at age 5 and older. Identification of cohort(s) for which density-dependent growth is most pronounced could help to focus efforts on targeted reduction of specific fish sizes/ages that minimize the cost–benefit ratio of fish removal efforts.

South Dakota↗