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Geology topics

J. W. Harvey

Publications and source records attributed to J. W. Harvey.

15 recordsLinked to original sources
USGS2018

Less fine particle retention in a restored versus unrestored urban stream: Balance between hyporheic exchange, resuspension, and immobilization

Stream restoration goals include reducing erosion and increasing hyporheic exchange to promote biogeochemical processing and improve water quality. Little is known, however, about fine particle dynamics in response to stream restoration. Fine particles (<100 μm) are exchanged with transient storage areas near and within streambeds and banks. Fine particle retention directly impacts carbon and nutrient cycling by supporting benthic and hyporheic primary production, but overaccumulation of fine particle deposits can impair metabolism by burying benthic biofilms and reducing streambed permeability. We analyzed the transport and retention of water and fine particles at both the reach and local scales in a restored urban stream, 9 years postrestoration. We injected conservative solute and fine particle tracers under summer baseflow conditions and monitored their distribution between surface water, porewaters, and storage areas (i.e., biofilms, hyporheic zones, and slow surface waters). Comparison of the results to a nearby unrestored stream demonstrate that the restored reach had 10–45 times greater exchange of fine particles with transient storage zones, but 5 times lower rate of net particle immobilization. Local-scale results showed that restoration increased fine particle exchange with short-term storage areas but did not increase long-term particle retention. Thus, the restored stream rapidly exchanged fine sediments with transient storage areas, but did not store fine sediments as efficiently as the unrestored stream. The decreased retention of particulate organic matter in the restored stream may reduce biogeochemical processes, such as denitrification, by not providing sufficient organic carbon or the surface area required for microbial colonization.

JGR Biogeosciences↗
USGS2008

Advection, dispersion, and filtration of fine particles within emergent vegetation of the Florida Everglades

The movement of particulate matter within wetland surface waters affects nutrient cycling, contaminant mobility, and the evolution of the wetland landscape. Despite the importance of particle transport in influencing wetland form and function, there are few data sets that illuminate, in a quantitative way, the transport behavior of particulate matter within surface waters containing emergent vegetation. We report observations from experiments on the transport of 1 ??m latex microspheres at a wetland field site located in Water Conservation Area 3A of the Florida Everglades. The experiments involved line source injections of particles inside two 4.8-m-long surface water flumes constructed within a transition zone between an Eleocharis slough and Cladium jamaicense ridge and within a Cladium jamaicense ridge. We compared the measurements of particle transport to calculations of two-dimensional advection-dispersion model that accounted for a linear increase in water velocities with elevation above the ground surface. The results of this analysis revealed that particle spreading by longitudinal and vertical dispersion was substantially greater in the ridge than within the transition zone and that particle capture by aquatic vegetation lowered surface water particle concentrations and, at least for the timescale of our experiments, could be represented as an irreversible, first-order kinetics process. We found generally good agreement between our field-based estimates of particle dispersion and water velocity and estimates determined from published theory, suggesting that the advective-dispersive transport of particulate matter within complex wetland environments can be approximated on the basis of measurable properties of the flow and aquatic vegetation. Copyright 2008 by the American Geophysical Union.

Water Resources Research↗
USGS2008

Ground-based thermography of fluvial systems at low and high discharge reveals potential complex thermal heterogeneity driven by flow variation and bioroughness

Temperature is a primary physical and biogeochemical variable in aquatic systems. Field‐based measurement of temperature at discrete sampling points has revealed temperature variability in fluvial systems, but traditional techniques do not readily allow for synoptic sampling schemes that can address temperature‐related questions with broad, yet detailed, coverage. We present results of thermal infrared imaging at different stream discharge (base flow and peak flood) conditions using a handheld IR camera. Remotely sensed temperatures compare well with those measured with a digital thermometer. The thermal images show that periphyton, wood, and sandbars induce significant thermal heterogeneity during low stages. Moreover, the images indicate temperature variability within the periphyton community and within the partially submerged bars. The thermal heterogeneity was diminished during flood inundation, when the areas of more slowly moving water to the side of the stream differed in their temperature. The results have consequences for thermally sensitive hydroecological processes and implications for models of those processes, especially those that assume an effective stream temperature. Copyright © 2008 John Wiley & Sons, Ltd.

Hydrological Processes↗
USGS2006

Exact three-dimensional spectral solution to surface-groundwater interactions with arbitrary surface topography

It has been long known that land surface topography governs both groundwater flow patterns at the regional‐to‐continental scale and on smaller scales such as in the hyporheic zone of streams. Here we show that the surface topography can be separated in a Fourier‐series spectrum that provides an exact solution of the underlying three‐dimensional groundwater flows. The new spectral solution offers a practical tool for fast calculation of subsurface flows in different hydrological applications and provides a theoretical platform for advancing conceptual understanding of the effect of landscape topography on subsurface flows. We also show how the spectrum of surface topography influences the residence time distribution for subsurface flows. The study indicates that the subsurface head variation decays exponentially with depth faster than it would with equivalent two‐dimensional features, resulting in a shallower flow interaction.

Geophysical Research Letters↗
USGS2006

Modeling decadal timescale interactions between surface water and ground water in the central Everglades, Florida, USA

Surface-water and ground-water flow are coupled in the central Everglades, although the remoteness of this system has hindered many previous attempts to quantify interactions between surface water and ground water. We modeled flow through a 43,000 ha basin in the central Everglades called Water Conservation Area 2A. The purpose of the model was to quantify recharge and discharge in the basin's vast interior areas. The presence and distribution of tritium in ground water was the principal constraint on the modeling, based on measurements in 25 research wells ranging in depth from 2 to 37 m. In addition to average characteristics of surface-water flow, the model parameters included depth of the layer of 'interactive' ground water that is actively exchanged with surface water, average residence time of interactive ground water, and the associated recharge and discharge fluxes across the wetland ground surface. Results indicated that only a relatively thin (8 m) layer of the 60 m deep surfical aquifer actively exchanges surface water and ground water on a decadal timescale. The calculated storage depth of interactive ground water was 3.1 m after adjustment for the porosity of peat and sandy limestone. Modeling of the tritium data yielded an average residence time of 90 years in interactive ground water, with associated recharge and discharge fluxes equal to 0.01 cm d -1. 3H/3He isotopic ratio measurements (which correct for effects of vertical mixing in the aquifer with deeper, tritium-dead water) were available from several wells, and these indicated an average residence time of 25 years, suggesting that residence time was overestimated using tritium measurements alone. Indeed, both residence time and storage depth would be expected to be overestimated due to vertical mixing. The estimate of recharge and discharge (0.01 cm d-1) that resulted from tritium modeling therefore is still considered reliable, because the ratio of residence time and storage depth (used to calculated recharge and discharge) is much less sensitive to vertical mixing compared with residence time alone. We conclude that a small but potentially significant component of flow through the Everglades is recharged to the aquifer and stored there for years to decades before discharged back to surface water. Long-term storage of water and solutes in the ground-water system beneath the wetlands has implications for restoration of Everglades water quality.

Journal of Hydrology↗
USGS2006

Comparison of methods used to diagnose generalized inflammatory disease in manatees (Trichechus manatus latirostris)

Manatees ( Trichechus manatus latirostris ) are afflicted with inflammatory and infectious disease secondary to human interaction, such as boat strike and entanglement, as well as &ldquo;cold stress syndrome&rdquo; and pneumonia. White-blood-cell count and fever, primary indicators of systemic inflammation in most species, are insensitive in diagnosing inflammatory disease in manatees. Acute phase-response proteins, such as haptoglobin and serum amyloid A, have proven to be sensitive measures of inflammation/infection in domestic large animal species. This study assessed diagnosis of generalized inflammatory disease by different methods including total white-blood-cell count, albumin: globulin ratio, gel electrophoresis analysis, C-reactive protein, alpha 1 acid glycoprotein, haptoglobin, fibrinogen, and serum amyloid A. Samples were collected from 71 apparently healthy and 27 diseased animals during diagnostic medical examination. Serum amyloid A, measured by ELISA, followed by albumin:globulin ratio, measured by plasma gel electrophoresis, were most sensitive in diagnosing inflammatory disease, with diagnostic sensitivity and specificity of approximately 90%. The reference interval for serum amyloid A is <10&ndash;50 &mu;g/ml with an equivocal interval of 51&ndash;70 &mu;g/ml. The reference interval for albumin:globulin ratio by plasma gel electrophoresis is 0.7&ndash;1.1. Albumin: globulin ratio, calculated using biochemical techniques, was not accurate due to overestimation of albumin by bromcresol green dye-binding methodology. Albumin:globulin ratio, measured by serum gel electrophoresis, has a low sensitivity of 15% due to the lack of fibrinogen in the sample. Haptoglobin, measured by hemoglobin titration, had a reference interval of 0.4&ndash;2.4 mg/ml, a diagnostic sensitivity of 60%, and a diagnostic specificity of 93%. The haptoglobin assay is significantly affected by hemolysis. Fibrinogen, measured by heat precipitation, has a reference interval of 100&ndash;400 mg/dl, a diagnostic sensitivity of 40%, and a diagnostic specificity of 95%.

Journal of Zoo and Wildlife Medicine↗
USGS2003

Using natural distributions of short-lived radium isotopes to quantify groundwater discharge and recharge

Radium activity in pore water of wetland sediments often differs from the amount expected from local production, decay, and exchange with solid phases. This disequilibrium results from vertical transport of radium with groundwater that flows between the underlying aquifer and surface water. In situations where groundwater recharge or discharge is significant, the rate of vertical water flow through wetland sediment can be determined from the radium disequilibrium by a combined model of transport, production, decay, and exchange with solid phases. We have developed and tested this technique at three sites in the freshwater portion of the Everglades by quantifying vertical advective velocities in areas with persistent groundwater recharge or discharge and estimating a coefficient of dispersion at a site that is subject to reversals between recharge and discharge. Groundwater velocities (v) were determined to be between 0 and -0.5 cm d-1 for a recharge site and 1.5 ?? 0.4 cm d-1 for a discharge site near Levee 39 in the Everglades. Strong gradients in 223Ra and 224Ra usually occurred at the base of the peat layer, which avoided the problems of other tracers (e.g., chloride) for which greatest sensitivity occurs near the peat surface - a zone readily disturbed by processes unrelated to groundwater flow. This technique should be easily applicable to any wetland system with different production rates of these isotopes in distinct sedimentary layers or surface water. The approach is most straightforward in systems where constant pore-water ionic strength can be assumed, simplifying the modeling of radium exchange.

Limnology and Oceanography↗
USGS2003

Predicting changes in hydrologic retention in an evolving semi-arid alluvial stream

Hydrologic retention of solutes in hyporheic zones or other slowly moving waters of natural channels is thought to be a significant control on biogeochemical cycling and ecology of streams. To learn more about factors affecting hydrologic retention, we repeated stream-tracer injections for 5 years in a semi-arid alluvial stream (Pinal Creek, Ariz.) during a period when streamflow was decreasing, channel width increasing, and coverage of aquatic macrophytes expanding. Average stream velocity at Pinal Creek decreased from 0.8 to 0.2 m/s, average stream depth decreased from 0.09 to 0.04 m, and average channel width expanded from 3 to 13 m. Modeling of tracer experiments indicated that the hydrologic retention factor ( R h ), a measure of the average time that solute spends in storage per unit length of downstream transport, increased from 0.02 to 8 s/m. At the same time the ratio of cross-sectional area of storage zones to main channel cross-sectional area ( A s / A ) increased from 0.2 to 0.8 m 2 /m 2 , and average water residence time in storage zones ( t s ) increased from 5 to 24 min. Compared with published data from four other streams in the US, Pinal Creek experienced the greatest change in hydrologic retention for a given change in streamflow. The other streams differed from Pinal Creek in that they experienced a change in streamflow between tracer experiments without substantial geomorphic or vegetative adjustments. As a result, a regression of hydrologic retention on streamflow developed for the other streams underpredicted the measured increases in hydrologic retention at Pinal Creek. The increase in hydrologic retention at Pinal Creek was more accurately predicted when measurements of the Darcy–Weisbach friction factor were used (either alone or in addition to streamflow) as a predictor variable. We conclude that relatively simple measurements of channel friction are useful for predicting the response of hydrologic retention in streams to major adjustments in channel morphology as well as changes in streamflow.

Advances in Water Resources↗
USGS2002

Tracing sources of sulfur in the Florida Everglades

We examined concentrations and sulfur isotopic ratios ( 34 S/ 32 S, expressed as δ 34 S in parts per thousand [‰] units) of sulfate in surface water, ground water, and rain water from sites throughout the northern Everglades to establish the sources of sulfur to the ecosystem. The geochemistry of sulfur is of particular interest in the Everglades because of its link, through processes mediated by sulfate-reducing bacteria, to the production of toxic methylmercury in this wetland ecosystem. Methylmercury, a neurotoxin that is bioaccumulated, has been found in high concentrations in freshwater fish from the Everglades, and poses a potential threat to fish-eating wildlife and to human health through fish consumption. Results show that surface water in large portions of the Everglades is heavily contaminated with sulfate, with the highest concentrations observed in canals and marsh areas receiving canal discharge. Spatial patterns in the range of concentrations and δ 34 S values of sulfate in surface water indicate that the major source of sulfate in sulfur-contaminated marshes is water from canals draining the Everglades Agricultural Area. Shallow ground water underlying the Everglades and rain water samples had much lower sulfate concentrations and δ 34 S values distinct from those found in surface water. The δ 34 S results implicate agricultural fertilizer as a major contributor to the sulfate contaminating the Everglades, but ground water under the Everglades Agricultural Area (EAA) may also be a contributing source. The contamination of the northern Everglades with sulfate from canal discharge may be a key factor in controlling the distribution and extent of methylmercury production in the Everglades.

Florida↗
USGS2001

Analysing the capabilities and limitations of tracer tests in stream-aquifer systems

The goal of this study was to identify the limitations that apply when we couple conservative-tracer injection with reactive solute sampling to identify the transport and reaction processes active in a stream. Our methodology applies Monte Carlo uncertainty analysis to assess the ability of the tracer approach to identify the governing transport and reaction processes for a wide range of stream-solute transport and reaction scenarios likely to be encountered in high-gradient streams. Our analyses identified dimensionless factors that define the capabilities and limitations of the tracer approach. These factors provide a framework for comparing and contrasting alternative tracer test designs.

IAHS-AISH Publication↗
USGS2001

Quantifying groundwater discharge through fringing wetlands to estuaries: Seasonal variability, methods comparison, and implications for wetland-estuary exchange

Because groundwater discharge along coastal shorelines is often concentrated in zones inhabited by fringing wetlands, accurately estimating discharge is essential for understanding its effect on the function and maintenance of these ecosystems. Most previous estimates of groundwater discharge to coastal wetlands have been temporally limited and have used only a single approach to estimate discharge. Furthermore, groundwater input has not been considered as a major mechanism controlling pore-water flushing. We estimated seasonally varying groundwater discharge into a fringing estuarine wetland using three independent methods (Darcy's Law, salt balance, and Br- tracer). Seasonal patterns of discharge predicted by both Darcy's Law and the salt balance yielded similar seasonal patterns with discharge maxima and minima in spring and early fall, respectively. They differed, however, in the estimated magnitude of discharge by two- to fourfold in spring and by 10-fold in fall. Darcy estimates of mean discharge ranged between -8.0 and 80 L m-2 d-1, whereas the salt balance predicted groundwater discharge of 0.6 to 22 L m-2 d-1. Results from the Br- tracer experiment estimated discharge at 16 L m-2 d-t, or nearly equal to the salt balance estimate at that time. Based upon the tracer test, pore-water conductivity profiles, and error estimates for the Darcy and salt balance approaches, we concluded that the salt balance provided a more certain estimate of groundwater discharge at high flow (spring). In contrast, the Darcy method provided a more reliable estimate during low flow (fall). Groundwater flushing of pore water in the spring exported solutes to the estuary at rates similar to tidally driven surface exchange seen in previous studies. Based on pore-water turnover times, the groundwater-driven flux of dissolved organic carbon (DOC), dissolved organic nitrogen (DON), and NH4+ to the estuary was 11.9, 1.6, and 1.3 g C or g N m-2 wetland for the 90 d encompassing peak spring discharge. Groundwater-induced flushing of the wetland subsurface therefore represents an important mechanism by which narrow fringing marshes may seasonally relieve salt stress and export material to adjacent water masses.

Limnology and Oceanography↗
USGS2000

Reactive uptake of trace metals in the hyporheic zone of a mining- contaminated stream, Pinal Creek, Arizona

Significant uptake of dissolved metals occurred by interaction of groundwater and surface water with hyporheic-zone sediments during transport in Pinal Creek, AZ. The extent of trace metal uptake was calculated by mass balance measurements made directly within the hyporheic zone. A conservative solute tracer injected into the stream was used to quantify hydrologic exchange with the stream and groundwater. Fractional reactive uptake of dissolved metals entering the hyporheic zone was determined at 29 sites and averaged 52 ± 25, 27 ± 19, and 36 ± 24% for Co, Ni, and Zn, compared with Mn uptake of 22 ± 19%. First-order rate constants (λ h ) of metal uptake in the hyporheic zone were determined at seven sites using the exchange rate of water derived from tracer arrival in the streambed. Reaction-time constants (1/λ h ) averaged 0.41, 0.84, and 0.38 h for Co, Ni, and Zn, respectively, and 1.3 h for Mn. In laboratory experiments with streambed sediments, metal uptake increased with preexisting Mn oxide concentration, supporting our interpretation that Mn oxides in the hyporheic zone enhance trace metal uptake. Reach-scale mass-balance calculations that include groundwater metal inputs indicated that decreases in metal loads ranged from 12 to 68% over the 7-km perennial reach depending on the metal. The decreases in metal loads are attributed to uptake of trace metals by Mn oxides in the hyporheic zone that is enhanced because of ongoing Mn oxide formation. Analysis of dissolved-metal streambed profiles and conservative solute tracers provide a valuable tool for quantifying metal uptake or release in the hyporheic zone of contaminated streams.

Arizona↗
USGS2000

Geochemistry of sulfur in the Florida Everglades: 1994 through 1999

In this report, we present data on the geochemistry of sulfur in sediments and in surface water, groundwater, and rainwater in the Everglades region in south Florida. The results presented here are part of a larger study intended to determine the roles played by the cycling of carbon, nitrogen, phosphorus, and sulfur in the ecology of the south Florida wetlands. The geochemistry of sulfur in the region is particularly important because of its link to the production of toxic methylmercury through processes mediated by sulfate reducing bacteria. Sediment cores were collected from the Everglades Agricultural Area (EAA), Water Conservation Areas (WCAs) 1A and 2A, from Lake Okeechobee, and from Taylor Slough in the southern Everglades. Water collection was more widespread and includes surface water from WCAs 1A, 2A, 3A, 2B, the EAA, Taylor Slough, Lake Okeechobee, and the Kissimmee River. Groundwater was collected from The Everglades Nutrient Removal Area (ENR) and from WCA 2A. Rainwater was collected at two month intervals over a period of one year from the ENR and from WCA 2A. Water was analyzed for sulfate concentration and sulfate sulfur stable isotopic ratio (34S/32S). Sediment cores were analyzed for total sulfur concentration and/or for concentrations of sulfur species (sulfate, organic sulfur, disulfides, and acid volatile sulfides (AVS)) and for their stable sulfur isotopic ratio. Results show a decrease in total sulfur content (1.57 to 0.61 percent dry weight) with depth in two sediment cores collected in WCA 2A, indicating that there has been an increase in total sulfur content in recent times. A sediment core from the center of Lake Okeechobee shows a decrease in total sulfur content with depth (0.28 to 0.08 percent dry weight). A core from the periphery of the lake (South Bay) likewise shows a decrease in total sulfur content with depth (1.00 to 0.69 percent dry weight), however, the overall sulfur content is greater than that near the center at all depths. This suggests input of sulfur in recent times, especially near the lake margins. Sediments show a general decrease in sulfur concentration with depth, probably because of increases in sulfur input to the marshes in recent times. Regional differences in the concentrations and stable isotopic ratios of sulfate sulfur in surface water show that sulfur contamination to the northern Everglades likely originates from canals draining the EAA.

Florida↗
USGS1995

Fluxes of water and solute in a coastal wetland sediment. 2. Effect of macropores on solute exchange with surface water

Chloride was highly concentrated relative to seawater in matrix porewater but was comparatively dilute in macropores. Concentration differences in pore-size classes declined with depth until indistinguishable below 10 cm. The segregated chloride distribution can be explained if recharge to the sediment occurred by downward infiltration in macropores and discharge occurred by an upward flux in matrix pores to satisfy evapotranspiration. Without disturbance by the downward infiltration flux in macropores, upward advection of chloride in matrix pores and evapoconcentration increased chloride concentrations in matrix pores to a level well above the concentration in seawater. The resulting high concentrations of chloride in matrix pores induced a large diffusive efflux of chloride into surface water that was sufficient to balance new input of chloride by infiltration of seawater in macropores (0.085 mmol Cl cm -2 day-1). Transport models that were constrained by water balance measurements at the field site explained both the exponential form of the vertical distribution of chloride in matrix pores and the rate of change in storage of chloride in sediment porewater over a one month period.

Journal of Hydrology↗