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At least 19 recordsLinked to original sources
USGS2006

Preface: Bridging the gap between theory and practice on the upper Mississippi River

In July 1994, the Upper Mississippi River (UMR) served as a nexus for coalescing scientific information and management issues related to worldwide floodplain river ecosystems. The objective of the conference ‘Sustaining the Ecological Integrity of Large Floodplain Rivers: Application of Ecological Knowledge to River Management’, was to provide presentations of current ideas from the scientific community. To translate the many lessons learned on other river systems to operational decisions on the UMR, a companion workshop for managers and the general public was held immediately after the conference. An immediate local need for such sharing has existed for several years, as the U.S. Corps of Engineers is currently planning commercial navigation activities that will influence the ecological integrity of the river over the next half century. Recently, other equally important management issues have surfaced, including managing the river as an element of the watershed, and assessing its ecological value as a system instead of a collection of parts (Upper Mississippi River Conservation Committee, 1993). Regional and state natural resource agencies are becoming more convinced that they need to address these issues within their own authorities, however spatially limited, rather than relying on the U.S. Corps of Engineers to manage the ecosystem as an adjunct to its purpose of navigation support.

Mississippi River↗
USGS2006

Conceptual model for quantifying pre-smolt production from flow-dependent physical habitat and water temperature

A conceptual model has been developed to test river regulation concepts by linking physical habitat and water temperature with salmonid population and production in cold water streams. Work is in progress to examine numerous questions as part of flow evaluation and habitat restoration programmes in the Trinity River of California and elsewhere. For instance, how much change in pre-smolt chinook salmon ( Oncorhynchus tshawytscha ) production in the Trinity River would result from a different annual instream allocation (i.e. up or down from 271 × 10 6 m 3 released in the late 1980s) and how much change in pre-smolt production would result from a different release pattern (i.e. different from the 8.5 m 3 s −1 year-round release). The conceptual model is being used to: design, integrate and improve young-of-year population data collection efforts; test hypotheses that physical habitat significantly influences movement, growth and mortality of salmonid fishes; and analyse the relative severity of limiting factors during each life stage. The conceptual model, in conjunction with previously developed tools in the Instream Flow Incremental Methodology, should provide the means to more effectively manage a fishery resource below a regulated reservoir and to provide positive feedback to planning of annual reservoir operations.

Regulated Rivers: Research & Management↗
USGS2006

Evaluation of freshwater mussel relocation as a conservation and management strategy

The relocation of unionacean mussels is commonly used as a conservation and management tool in large rivers and streams. Relocation has been used to recolonize areas where mussel populations have been eliminated by prior pollution events, to remove mussels from construction zones and to re-establish populations of endangered species. More recently, relocation has been used to protect native freshwater mussels from colonization by the exotic zebra mussel Dreissena polymorpha. We conducted a literature review of mussel relocations and evaluated their relative success as a conservation and management strategy. We found that 43% of all relocations were conducted because of construction projects that were forced to comply with the Endangered Species Act 1973 and that only 16% were monitored for five or more consecutive years. Most (43%) relocation projects were conducted from July to September, presumably a period when reproductive stress is relatively low for most species and the metabolic rate is sufficient for reburrowing in the substrate. The mortality of relocated mussels was unreported in 27% of projects; reported mortality varied widely among projects and species and was difficult to assess. The mean mortality of relocated mussels was 49% based on an average recovery rate of 43%. There is little guidance on the methods for relocation or for monitoring the subsequent long-term status of relocated mussels. Based on this evaluation, research is needed to develop criteria for selecting a suitable relocation site and to establish appropriate methods and guidelines for conducting relocation projects.

Regulated Rivers: Research & Management↗
USGS2006

Analysis of water level management on the upper Mississippi River (1980–1990)

Management at 27 low-head dams affects water surface elevations for a 1050km stretch of the Upper Mississippi River (UMR) between St Louis, Missouri and Minneapolis, Minnesota. A systemic overview is given of current operating plans at dams on the UMR and historical data are analysed to determine how well the operating plans are being met. Water level elevations at all 27 dams are regulated as a function of discharge, although plans are specific for each dam. The management objective is to maintain a target water level at specific locations (control point) in each impoundment over specific ranges of discharge. The target water level and control point may change as discharge changes in each impoundment. In some of the impoundments water regulation causes drawdowns below the elevation for which the dams were planned, and at other dams no drawdown occurs. During the navigation seasons of 1980 to 1990, water levels were within their target window for an average of 72·5% of the time for 25 dams analysed. Difficulties in meeting targets are caused by winds, local rainfall events, ice dams and rapidly fluctuating discharges from tributaries with upstream reservoirs used for peaking hydropower.

Upper Mississippi River↗
USGS2001

Macroinvertebrate instream flow studies after 20 years: A role in stream management and restoration

Over the past two decades of refinement and application of instream flow evaluations, we have examined the hydraulic habitat of aquatic macroinvertebrates in a variety of conditions, along with the role of these macroinvertebrates in sustaining ecosystem integrity. Instream flow analyses assume that predictable changes in channel flow characteristics can, in turn, be used to predict the change in the density or distribution of lotic species or, more appropriately, the availability of useable habitat for those species. Five major hydraulic conditions most affect the distribution and ecological success of lotic biota: suspended load, bedload movement, and water column effects, such as turbulence, velocity profile, and substratum interactions (near-bed hydraulics). The interactions of these hydraulic conditions upon the morphology and behavior of the individual organisms govern the distribution of aquatic biota. Historically, management decisions employing the Physical Habitat Simulation (PHABSIM) have focused upon prediction of available habitat for life stages of target fish species. Regulatory agencies have rarely included evaluation of benthos for flow reservations. Although ‘taxonomic discomfort’ may be cited for the reluctant use or creation of benthic criteria, we suggest that a basic misunderstanding of the links between benthic macroinvertebrate and the fish communities is still a problem. This is derived from the lack of a perceived ‘value’ that can be assigned to macroinvertebrate species. With the exception of endangered mussel species (for which PHABSIM analysis is probably inappropriate), this is understandable. However, it appears that there is a greater ability to predict macroinvertebrate distribution (that is, a response to the change in habitat quality or location) and diversity without complex population models. Also, habitat suitability criteria for water quality indicator taxa (Ephemeroptera, Plecoptera, and Trichoptera; the so-called ‘EPTs’) may also provide additional management options to stream regulators. The greatest application for macroinvertebrate criteria will be in low-order streams where a more immediate link to fish communities can be established. We present an example from Queens Creek, in North Carolina, USA, in which monthly allocations required to preserve the integrity of the benthic macroinvertebrate community were significantly higher than for the target benthic fish species, Cottus bairdi . In the months when both Cottus and community diversity of macroinvertebrates were the ‘bottleneck’ life stages, preservation of only fish species could result in an additional 5–25% loss in macroinvertebrate habitat. We suggest that, as there becomes an increased emphasis on maintaining macroinvertebrates as monitors of stream health, there will be a concurrent emphasis on incorporating hydraulic habitat conditions as a part of bioassessment.

Regulated Rivers: Research & Management↗
USGS1998

Modelling of instream flow needs: The link between sediment and aquatic habitat

Instream flows are needed to remove undesirable accumulations of sediment. Fines and sand accumulate on and in gravels during periods of low flow and must be removed (flushed) periodically in order for the gravel to continue as suitable habitat for aquatic animals. Sediment of all sizes can also fill pools in the river and must be removed in order to maintain pool habitat. A new technique relates the sizes of sediment important in the biological process to the size transported as wash, suspended and bed loads. The technique has a biological component, a hydraulic component and a selection component that links the two. The technique was used to determine the instream flows needed to maintain habitat for Colorado squawfish in the Gunnison River in western Colorado. Flows included a flushing flow to remove course sand form the riffles where Colorado squawfish spawn, to remove fines and sand from the river in general, to remove gravel from pools, and to scour side channels. The Gunnison River has a mean discharge of 73 m 3 /s and the flows of both sediment and water in the river have been modified by the construction of reservoirs and by major diversions for irrigation. The flows needed to maintain the spawning habitat for the Colorado squawfish by removing fines and sand from the riffles is 355 m 3 /s, to remove sand and fines from the river is 354 m 3 /s, to remove gravel from pools is 484 m 3 /s and to scour side channels is 210 m 3 /s. The flow required to maintain the riffles during spawning is 210 m 3 /s. These flushing flows are not required each year but they are required periodically (usually not less than once in every 3 years); and the maintenance flow is needed every year.

Regulated Rivers: Research & Management↗
USGS1998

Flooding and forest succession in a modified stretch along the Upper Mississippi River

This research examines the effect of a rare flood on floodplain forest regeneration in a 102-km stretch of the Mississippi River beginning 21 km above the mouth of the Ohio River. The river has been restricted by levees and navigation structures and subjected to sediment dredging to maintain a stable navigation channel. Because the bank erosion–accretion process has been slowed or eliminated, cottonwood ( Populus spp.) and willow ( Salix spp . ) communities regenerate poorly in the modified river environment. An unusually large flood in 1993 destroyed the entire ground vegetation layer, killing 77.2% of the saplings and 32.2% of the trees. The flood created an alternative mechanism for cottonwood and willow to regenerate under canopy openings, enabling the community type composition of the present-day forest to be sustained for the next 50 years. Over time, however, the forest will likely exhibit considerable compositional fluctuation.

Mississippi River↗
USGS1999

Estimation of geomorphically significant flows in alpine streams of the Rocky Mountains, Colorado (USA)

Streamflows recorded at 24 gauging stations in the Rocky Mountains of Colorado were analyzed to derive regional regression equations for estimating the natural flow duration and flood frequency in reaches where the natural flows are unknown or have been altered by diversion or regulation. The principal objective of this analysis is to determine whether the relatively high, infrequent, but geomorphically and ecologically important flows in the Rocky Mountains can be accurately estimated by regional flow duration equations. The region considered in this study is an area of relatively abundant runoff, and, consequently, intense water resources development. The specific streams analyzed here, however, are unaltered and remain nearly pristine. Regional flow duration equations are derived for two situations. When the mean annual discharge is known, flows ≧10% of the time can be estimated with an uncertainty of ±9% for the 10% exceedance flow, to ±11% for the 1.0% exceedance flow. When the mean annual discharge is unknown, the relatively high, infrequent flow can be estimated using the mean basin precipitation rate (in m 3 /s), and basin relief with an uncertainty of ±23% for the 10% exceedance flow to ±21% for the 1.0% exeedance flow. The uncertainty in estimated discharges using the equations derived in this analysis is substantially smaller than has been previously reported, especially for the geomorphically significant flows which are relatively large and infrequent. The improvement is due primarily to the quality of streamflow records analyzed and a well-defined hydrologic region.

Colorado↗
USGS1999

Factors controlling the establishment of Fremont cottonwood seedlings on the Upper Green River, USA

Declines in cottonwood ( Populus spp.) recruitment along alluvial reaches of large rivers in arid regions of the western United States have been attributed to modified flow regimes, lack of suitable substrate, insufficient seed rain, and increased interspecific competition. We evaluated whether and how these factors were operating during 1993–1996 to influence demographics of Fremont cottonwood ( P. deltoides Marshall subsp. wislizenii (Watson) Eckenwalder) along reaches of the Green and Yampa Rivers near their confluence in northwestern Colorado. We examined seedling establishment, defined as survival through three growing seasons, at three alluvial reaches that differed primarily in the level of flow regulation: a site on the unregulated Yampa, an upper Green River site regulated by Flaming Gorge Dam, and a lower Green River site below the Green–Yampa confluence. Seed rain was abundant in all sites, and led to large numbers of germinants (first-year seedlings) appearing each year at all sites. The regulated flow in the upper Green River reach restricted germination to islands and cut banks that were later inundated or eroded; no seedlings survived there. Mortality at the lower Green River site was due largely to desiccation or substrate erosion; 23% of 1993 germinants survived their first growing season, but at most 2% survived through their second. At the Yampa River site, germinants appeared on vegetated and unvegetated surfaces up to 2.5 m above base flow stage, but survived to autumn only on bare surfaces at least 1.25 m above base flow stage, and where at least 10 of the upper 40 cm of the alluvium was fine-textured. Our studies of rooting depths and the stable isotopic composition of xylem water showed that seedlings in the most favorable locations for establishment at the Yampa site do not become phreatophytic until their third or fourth growing season. Further, the results of experimental field studies examining effects of shade and competition supported the hypothesis that insufficient soil moisture, possibly in combination with insufficient light, restricts establishment to unvegetated sites. Collectively, the demographic and experimental studies suggest that, in arid regions, soil water availability is at least as important as light level in limiting establishment of Fremont cottonwood seedlings. We hypothesize that in cases where arid land rivers experience large spring stage changes, recruitment is further constrained within bare areas to those sites that contain sufficient fine-textured alluvium, saturated during the spring flood, to provide the flood-derived soil moisture normally necessary for late-summer seedling survival.

Upper Green River↗
USGS1999

Butterfly (Papilionoidea and Hesperioidea) assemblages associated with natural, exotic, and restored riparian habitats along the lower Colorado River, USA

Butterfly assemblages were used to compare revegetated and natural riparian areas along the lower Colorado River. Species richness and correspondence analyses of assemblages showed that revegetated sites had fewer biological elements than more natural sites along the Bill Williams River. Data suggest that revegetated sites do not provide resources needed by some members of the butterfly assemblage, especially those species historically associated with the cottonwood/willow ecosystem. Revegetated sites generally lacked nectar resources, larval host plants, and closed canopies. The riparian system along the regulated river segment that contains these small revegetated sites also appears to have diminished habitat heterogeneity and uncoupled riparian corridors. Revegetated sites were static environments without the successional stages caused by flooding disturbance found in more natural systems. We hypothesize that revegetation coupled with a more natural hydrology is important for restoration of butterfly assemblages along the lower Colorado River.

Bill Williams River, Colorado River↗
USGS2000

Entrainment of riparian gravel and cobbles in an alluvial reach of a regulated canyon river

Many canyon rivers have channels and riparian zones composed of alluvial materials and these reaches, dominated by fluvial processes, are sensitive to alterations in streamflow regime. Prior to reservoir construction in the mid-1960s, banks and bars in alluvial reaches of the Gunnison River in the Black Canyon National Monument, Colorado, USA, periodically were reworked and cleared of riparian vegetation by mainstem floods. Recent interest in maintaining near-natural conditions in the Black Canyon using reservoir releases has created a need to estimate sediment-entraining discharges for a variety of geomorphic surfaces composed of sediment ranging in size from gravel to small boulders. Sediment entrainment potential was studied at eight cross-sections in an alluvial reach of the Gunnison River in the Black Canyon in 1994 and 1995. A one-dimensional water-surface profile model was used to estimate water-surface elevations, flow depths, and hydraulic conditions on selected alluvial surfaces for discharges ranging from 57 to 570 m 3 /s. Onsite observations before and after a flood of 270 m 3 /s confirmed sediment entrainment on several surfaces inundated by the flood. Selective entrainment of all but the largest particle sizes on the surface occurred at some locations. Physical evidence of sediment entrainment, or absence of sediment entrainment, on inundated surfaces generally was consistent with critical shear stresses estimated with a dimensionless critical shear stress of 0.030. Sediment-entrainment potential over a range of discharges was summarized by the ratio of the local boundary shear stress to the critical shear stress for d 50 , given hydraulic geometry and sediment-size characteristics. Differing entrainment potential for similar geomorphic surfaces indicates that estimation of minimum streamflow requirements based on sediment mobility is site-specific and that there is no unique streamflow that will initiate movement of d 50 at every geomorphically similar location in the Black Canyon.

Colorado↗
USGS2006

Mussels: The forgotten fauna of regulated rivers. A case study of the Caney Fork River

During the past century freshwater mussel populations have declined precipitously throughout North America. Much of this loss has resulted from the construction of dams. In the Cumberland River system, 23% (22 species) of the historic mussel fauna is extinct or listed as endangered. Several additional species have either been extirpated from the Cumberland River or exist only in small, non-reproducing populations. Mussels of headwater streams have been severely affected by coal mining and poor land use practices. An intensive survey was conducted in the Caney Fork River, a major tributary to the Cumberland River, to determine the historic and extant mussel fauna. The results indicate that at least 37 species of mussels have been extirpated from the Caney Fork River, mainly as a result of the construction and operation of the Center Hill Dam. Among the species extirpated, two are now extinct, five are endangered and five are candidates for listing as threatened or endangered. Effects associated with this dam include the inundation of 102 km of riverine habitat, the discharge of hypolimnetic water (which limits mussel reproduction) and an alternating pattern of stream bed scouring and dewatering. The recognition of mussel life history requirements during preconstruction could have reduced many of these effects.

North Carolina↗
USGS2006

Application and testing of a procedure to evaluate transferability of habitat suitability criteria

A procedure designed to test the transferability of habitat suitability criteria was evaluated in the Cache la Poudre River, Colorado. Habitat suitability criteria were developed for active adult and juvenile rainbow trout in the South Platte River, Colorado. These criteria were tested by comparing microhabitat use predicted from the criteria with observed microhabitat use by adult rainbow trout in the Cache la Poudre River. A one-sided X 2 test, using counts of occupied and unoccupied cells in each suitability classification, was used to test for non-random selection for optimum habitat use over usable habitat and for suitable over unsuitable habitat. Criteria for adult rainbow trout were judged to be transferable to the Cache la Poudre River, but juvenile criteria (applied to adults) were not transferable. Random subsampling of occupied and unoccupied cells was conducted to determine the effect of sample size on the reliability of the test procedure. The incidence of type I and type II errors increased rapidly as the sample size was reduced below 55 occupied and 200 unoccupied cells. Recommended modifications to the procedure included the adoption of a systematic or randomized sampling design and direct measurement of microhabitat variables. With these modifications, the procedure is economical, simple and reliable. Use of the procedure as a quality assurance device in routine applications of the instream flow incremental methodology was encouraged.

Colorado↗
USGS2006

Ichthyoplankton abundance and variance in a large river system concerns for long-term monitoring

System-wide spatial patterns of ichthyoplankton abundance and variability were assessed in the upper Mississippi and lower Illinois rivers to address the experimental design and statistical confidence in density estimates. Ichthyoplankton was sampled from June to August 1989 in primary milieus (vegetated and non-vegated backwaters and impounded areas, main channels and main channel borders) in three navigation pools (8, 13 and 26) of the upper Mississippi River and in a downstream reach of the Illinois River. Ichthyoplankton densities varied among stations of similar aquatic landscapes (milieus) more than among subsamples within a station. An analysis of sampling effort indicated that the collection of single samples at many stations in a given milieu type is statistically and economically preferable to the collection of multiple subsamples at fewer stations. Cluster analyses also revealed that stations only generally grouped by their preassigned milieu types. Pilot studies such as this can define station groupings and sources of variation beyond an a priori habitat classification. Thus the minimum intensity of sampling required to achieve a desired statistical confidence can be identified before implementing monitoring efforts.

Illinois River, Mississippi River↗
USGS2006

Declines in aquatic vegetation in navigation pool no. 8, upper Mississippi River between 1975 and 1991

The biomass and frequency of occurrence of aquatic macrophytes observed during 1975 and 1991 in Navigation Pool No. 8 of the upper Mississippi River were compared. Samples were collected from contiguous backwater, isolated backwater and impounded habitat types. Overall declines were observed in both frequency and biomass between the two years. Changes in depth, water clarity and bed sediment texture were also observed. About 50% of the samples collected in 1991 had no vegetation, compared with 20% in 1975. The greatest reduction in frequency occurred among submergent taxa (77% in 1975 to 31% in 1991), whereas only slight declines were observed for emergent taxa. However, the mean biomass of both lifeforms decreased substantially (48 to 1 g/m 2 for submergent and 61 to 27 g/m 2 for emergent lifeforms). The mean total biomass declined from 114g/m 2 in 1975 to 35 g/m 2 in 1991. Declines were most evident in the impounded habitat, where the frequency of occurrence of submergent taxa decreased from 83% in 1975 to 11% in 1991, and mean biomass decreased from 90 to 1 g/m 2 . Similar but less extensive reductions in frequency and biomass of submergent taxa were observed in the contiguous backwater habitat. In contrast, both the frequency and biomass of floating-leaved macrophytes increased slightly in contiguous backwater habitats. Changes in frequency and biomass of macrophytes in isolated backwater habitats were neligible between 1975 and 1991. It is hypothesized that changes in the macrophyte community structure may be related to physical changes associated with 57 years of impoundment.

Mississippi River↗
USGS2006

Bioassessment of contaminant transport and distribution in aquatic ecosystems by chemical analysis of burrowing mayflies (Hexagenia)

Burrowing mayfly nymphs (Ephemeroptera) inhabit and ingest fine-grained sediments and detritus that may be enriched with metals and persistent organic compounds. The burrowing nymphs can externally adsorb and internally assimilate these contaminants, providing a link for the food chain transfer of potentially toxic substances from sediments to organisms in higher trophic levels. The emergent adults are short-lived and do not feed, thus their gut contents do not contribute greatly to their total contaminant burden. These characteristics make Hexagenia spp. and certain other burrowing mayflies useful for assessing ecosystem contamination. General protocols are presented for the collection, processing and analysis of emergent mayflies to assess the spatial distribution and bioaccumulation of sediment-associated contaminants in aquatic ecosystems. Two essential components of this bioassessment approach are a network of on-site volunteers with the materials and instructions needed to correctly collect and store samples and quality assurance procedures to estimate the accuracy of chemical analyses. The utility of this approach is demonstrated with an example of its application to the Upper Mississippi River (USA). Determination of cadmium, mercury and polychlorinated biphenyl congeners in emergent Hexagenia bilineata from a 1250km reach of this river revealed (1) several source areas of contaminants and (2) distinct patterns in the bioaccumulation (and apparent sediment-associated transport) of each residue on both small and large spatial scales.

Upper Mississippi River↗
USGS2001

Changes in backwater plant communities from 1975 to 1995 in Navigation Pool 8, Upper Mississippi River

Water elevation in the Upper Mississippi River (UMR) is highly regulated by an extensive system of locks and dams. Completion of this system in the 1930s created productive, biologically diverse backwater habitats. The status of plant communities in these backwater areas may now be threatened by several factors, including sediment accumulation, recreational use, and navigation traffic. Aerial photography, taken in 1975 and from 1991 to 1995, was used to describe vegetation changes occurring in four UMR backwater areas of Navigation Pool 8. The objectives were to determine (1) if changes occurring in these areas are consistent with hydrarch succession, (2) if the diversity of their plant communities has declined since 1975, and (3) how a large flood event that occurred in 1993 affected the composition and diversity of plant communities in these areas. Three general cover classes were recognized, representing an aquatic to terrestrial gradient. Coverages of specific vegetation types were estimated and evaluated using two indices of community diversity (vegetation richness and the Shannon diversity index). Though some vegetation changes were consistent with expected successional patterns (e.g. increased terrestrialization), other changes were not (e.g. loss of marsh vegetation). Diversity indices and coverages of most aquatic macrophytes declined from 1975 to 1991/1992 but then increased following the 1993 flood. The results suggest that disturbance–diversity concepts, including the flood pulse model, are applicable to the vegetation dynamics of these systems.

Mississippi River, Navigation Pool 8↗
USGS2006

Development of water level regulation strategy for fish and wildlife, upper Mississippi River system

Water level regulation has been proposed as a tool for maintaining or enhancing fish and wildlife resources in navigation pools and associated flood plains of the Upper Mississippi River System. Research related to the development of water level management plans is being conducted under the Long Term Resource Monitoring Program. Research strategies include investigations of cause and effect relationships, spatial and temporal patterns of resource components, and alternative problem solutions. The principal hypothesis being tested states that water level fluctuations resulting from navigation dam operation create less than optimal conditions for the reproduction and growth of target aquatic macrophyte and fish species. Representative navigation pools have been selected to describe hydrologic, engineering, and legal constraints within which fish and wildlife objectives can be established. Spatial analyses are underway to predict the magnitude and location of habitat changes that will result from controlled changes in water elevation.

Mississippi River↗