Temporally irregular breeding of western spadefoot toads (Spea hammondii) in managed wetlands
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Northwestern Naturalist↗
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Small boats disturb fish-holding marbled murrelets
Disturbance of seabirds by people at nesting colonies can reduce reproductive success and alter population demographics (Vermeer and Rankin 1984). In response to disturbance, adult seabirds may increase the incidence of alarm postures and alarm calling (Burger and Gochfeld 1993), increase heart and breathing rates (Culik and others 1990; Wilson and others 1991), reduce attendance of nest sites (Olsson and Gabrielsen 1990; Wilson and others 1991), and completely abandon nests and chicks (Boellstorff and others 1988; Evans and Kampp 1991). Daily or frequent handling of chicks can reduce their growth rates and survival (Harris and Wanless 1984; Pierce and Simons 1986; Piatt and others 1990).
Northwestern Naturalist↗
Habitat selection models for Pacific sand lance ( Ammodytes hexapterus ) in Prince William Sound, Alaska
We modeled habitat selection by Pacific sand lance ( Ammodytes hexapterus ) by examining their distribution in relation to water depth, distance to shore, bottom slope, bottom type, distance from sand bottom, and shoreline type. Through both logistic regression and classification tree models, we compared the characteristics of 29 known sand lance locations to 58 randomly selected sites. The best models indicated a strong selection of shallow water by sand lance, with weaker association between sand lance distribution and beach shorelines, sand bottoms, distance to shore, bottom slope, and distance to the nearest sand bottom. We applied an information-theoretic approach to the interpretation of the logistic regression analysis and determined importance values of 0.99, 0.54, 0.52, 0.44, 0.39, and 0.25 for depth, beach shorelines, sand bottom, distance to shore, gradual bottom slope, and distance to the nearest sand bottom, respectively. The classification tree model indicated that sand lance selected shallow-water habitats and remained near sand bottoms when located in habitats with depths between 40 and 60 m. All sand lance locations were at depths <60 m and 93% occurred at depths <40 m. Probable reasons for the modeled relationships between the distribution of sand lance and the independent variables are discussed.
Alaska↗
Monitoring biological diversity: strategies, tools, limitations, and challenges
Monitoring is an assessment of the spatial and temporal variability in one or more ecosystem properties, and is an essential component of adaptive management. Monitoring can help determine whether mandated environmental standards are being met and can provide an early-warning system of ecological change. Development of a strategy for monitoring biological diversity will likely be most successful when based upon clearly articulated goals and objectives and may be enhanced by including several key steps in the process. Ideally, monitoring of biological diversity will measure not only composition, but also structure and function at the spatial and temporal scales of interest. Although biodiversity monitoring has several key limitations as well as numerous theoretical and practical challenges, many tools and strategies are available to address or overcome such challenges; I summarize several of these. Due to the diversity of spatio-temporal scales and comprehensiveness encompassed by existing definitions of biological diversity, an effective monitoring design will reflect the desired sampling domain of interest and its key stressors, available funding, legal requirements, and organizational goals.
Northwestern Naturalist↗
Taxonomic and geographic variation in oviposition by tailed frogs ( Ascaphus spp )
Tailed frogs ( Ascaphus spp.) oviposit in cryptic locations in streams of the Pacific Northwest and Rocky Mountains. This aspect of their life history has restricted our understanding of their reproductive ecology. The recent split of A. montanus in the Rocky Mountains from A. truei was based on molecular differentiation, and comparisons of their ecology are limited. Our objectives were to provide a range-wide summary of information on Ascaphus oviposition, compare some aspects of the reproductive ecology of the 2 species, and examine geographic variation in their reproductive traits. Reproductive ecology of the 2 species differed. Ascaphus truei had smaller clutches, oviposited later in the summer, and had a longer duration of oviposition than A. montanus . A greater number of communal oviposition sites were attributed to A. montanus . These ecological differences support the recent taxonomic revision of Ascaphus and suggest that different management strategies may be necessary for each species where conservation is a priority.
Northwestern Naturalist↗
Black oystercatcher (Haematopus bachmani) population size, use of marine reserve complexes, and spatial distribution in Oregon
The Black Oystercatcher is a large shorebird found along the west coast of North America. Because of their small global population size, low reproductive rate, and dependence on rocky intertidal habitats, they are considered a “species of high conservation concern” and may act as an indicator of intertidal ecosystem health. In 2015, the Audubon Society of Portland initiated a 3-year shore-based population survey in Oregon building upon long-term monitoring previously conducted by the U.S. Geological Survey (USGS) and others. The objectives were to 1) Estimate the current minimum population of breeding Black Oystercatchers in Oregon and to compare that to previous estimates to better understand the population trend; 2) Document oystercatcher abundance adjacent to the Oregon’s system of Marine Reserves and Marine Protected Areas; and 3) Describe spatial distribution of breeding oystercatchers along the coast. We targeted all rocky shoreline habitats along Oregon’s coastline to perform abundance surveys each spring. A total of 75 survey routes were sampled using a standardized protocol. Trained volunteer community scientists conducted the majority of the surveys. We used N-mixture statistical models to estimate oystercatcher population size and probability of detection. Population estimates from the best fitting models were consistent, with estimates ranging from 506 oystercatchers in 2016 (95% credible interval, 463-560) to 629 (548-743) in 2015. These estimates indicated a small but stable population. Probability of detection remained consistent across years (ranging from 0.51 to 0.53). The effect of geographic region corresponded with greater bird density in the southern region of Oregon. Oystercatcher abundance adjacent to MR/MPAs accounted for between 12.4-18.3% of the total population estimate which was lower than expected (~25%). We recommend that subsequent conservation efforts directed on Black Oystercatchers in Oregon balance limiting human disturbance, particularly on the north and central coasts, with ensuring protection of core habitats on the south coast where much of the population resides.
Oregon↗
Occurrence of a suite of stream-obligate amphibians in timberlands of Mendocino County, California, examined using environmental DNA
Stream-obligate amphibians are important indicators of ecosystem health in the Pacific Northwest, but distributional information to improve forest management is lacking in many regions. We analyzed archived DNA extracted from water samples in 60 pools in streams on private timberlands in Mendocino County, California, for 3 California Species of Special Concern—Coastal Tailed Frogs ( Ascaphus truei ), Foothill Yellow-legged Frogs ( Rana boylii ), and Southern Torrent Salamanders ( Rhyacotriton variegatus )—to better understand their distributions in the region. Detection probabilities for eDNA of Foothill Yellow-legged Frogs and Coastal Tailed Frogs were positively influenced by water temperature. eDNA occurrence for both frogs was affected by whether silt or organic matter was a dominant substrate in the sampled pool, and Foothill Yellow-legged Frog eDNA occurrence was also affected by water temperature. Foothill Yellow-legged Frog eDNA occurrence had a strong, positive association with water temperature, with occurrence unlikely below 14°C and very likely above 16°C, and a positive association with silt or organic substrates in pools, which was likely an indicator of higher-order stream reaches. In contrast, Coastal Tailed Frogs had a negative association with silt or organic substrates. Historical visual detections were generally congruent with findings using eDNA, but differences highlight important areas for further study. We did not detect Southern Torrent Salamanders using eDNA at any sites. Our study reinforces that ecological relationships of these species are varied, and shows the importance of maintaining the integrity of streams with diverse characteristics for conserving stream amphibians.
California↗
Behavior and movement of formerly landlocked juvenile coho salmon after release into the free-flowing Cowlitz River, Washington
Formerly landlocked Coho Salmon (Oncorhynchus kisutch) juveniles (age 2) were monitored following release into the free-flowing Cowlitz River to determine if they remained in the river or resumed seaward migration. Juvenile Coho Salmon were tagged with a radio transmitter (30 fish) or Floy tag (1050 fish) and their behavior was monitored in the lower Cowlitz River. We found that 97% of the radio-tagged fish remained in the Cowlitz River beyond the juvenile outmigration period, and the number of fish dispersing downstream decreased with increasing distance from the release site. None of the tagged fish returned as spawning adults in the 2 y following release. We suspect that fish in our study failed to migrate because they exceeded a threshold in size, age, or physiological status. Tagged fish in our study primarily remained in the Cowlitz River, thus it is possible that these fish presented challenges to juvenile salmon migrating through the system either directly by predation or indirectly by competition for food or habitat. Given these findings, returning formerly landlocked Coho Salmon juveniles to the free-flowing river apparently provided no benefit to the anadromous population. These findings have management implications in locations where landlocked salmon have the potential to interact with anadromous species of concern.
Washington↗
Hatchlings of the western pond turtle ( Actinemys marmorata ) in diet of great blue heron ( Ardea herodias )
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Northwestern Naturalist↗
Fire effects on the Point Reyes Mountain Beaver ( Aplodontia rufa phaea ) at Point Reyes National Seashore, 10 years after the Vision Fire
The 1995 Vision Fire burned 5000 ha and destroyed 40% of the habitat of the Point Reyes Mountain Beaver ( Aplodontia rufa phaea ). Surveys immediately post-fire and in 2000 showed that only 0.4 to 1.7% of Mountain Beavers within the burn area survived. In 2000, dense, ground-hugging Blue-blossom Ceanothus ( Ceanothus thrysiflorus ) appeared to make coastal scrub thickets much less suitable for Mountain Beavers even though the number of burrows at our 11 study sites had returned to 88% of pre-fire numbers. In 2005 (10 y post-fire), the habitat appeared to be better for Mountain Beavers; Blue-blossom Ceanothus had diminished and vegetation more typical of northern coastal scrub, such as Coyote Brush ( Baccharis pilularis ) overstory with a lower layer of herbaceous vegetation, had greatly increased; but the number of Mountain Beaver burrows had declined to 52% of pre-fire numbers and there was little change in the number of sites occupied between our 2000 and 2005 surveys. With the expected successional changes in thicket structure, Mountain Beaver populations are likely to recover further, but there will probably be considerable variation in how each population stabilizes.
Northwestern Naturalist↗
Diel behavior of rearing fall Chinook salmon
In fisheries science, habitat use is often inferred when fish are sampled or observed in a particular location. Physical habitat is typically measured where fish are found, and thus deemed important to habitat use. Although less common, a more informative approach is to measure or observe fish behavior within given habitats to more thoroughly assess their use of those locations. While this approach better reflects how fish use habitat, fish behavior can be difficult to quantify, particularly at night. For example, Tiffan and others (2002, 2006) were able to quantify habitat availability and characteristics that were important for rearing juvenile fall Chinook Salmon (Oncorhynchus tshawytscha) in the Hanford Reach of the Columbia River. The authors, however, could only speculate as to how juvenile salmon use habitat and respond to changes in water level fluctuations. Conversely, in this study we provide data on the diel activities of rearing juvenile wild fall Chinook Salmon which provides a better understanding of how fish “use” these rearing habitats. Diel behavior patterns are important because fish in the Hanford Reach are often stranded on shorelines when the water level rapidly recedes because of hydroelectric power generation at upriver dams (Nugent and others 2002; Anglin and others 2006). We hypothesize that juvenile salmon are at greater risk of stranding at night because they are less active and occupy habitat differently than during the day. We used underwater videography to collect behavioral information during the day and night to determine if juvenile fall Chinook Salmon are more susceptible to stranding when water level fluctuations occur at night.
Northwestern Naturalist↗
High shrew diversity on Alaska's Seward Peninsula: Community assembly and environmental change
In September 2010, 6 species of shrews (genus: Sorex ) were collected at a single locality on the Seward Peninsula of Alaska. Such high sympatric diversity within a single mammalian genus is seldom realized. This phenomenon at high latitudes highlights complex Arctic community dynamics that reflect significant turnover through time as a consequence of environmental change. Each of these shrew species occupies a broad geographic distribution collectively spanning the entire Holarctic, although the study site lies within Eastern Beringia, near the periphery of all individual ranges. A review of published genetic evidence reflects a depauperate shrew community within ice-free Beringia through the last glaciation, and recent assembly of current diversity during the Holocene.
Alaska↗
Stomach contents of a Cuvier's Beaked Whale ( Ziphius cavirostris ) stranded in Monterey Bay, California
No abstract available.
California↗
Twenty-five years of monitoring a Townsend's Big-Eared Bat (Corynorhinus townsendii) maternity roost
A Corynorhinus townsendii maternity roost located in an abandoned ranch house in central California was monitored for 25 y. Prior to the discovery of the bats in 1987, the house was broken into regularly and disturbance levels were quite high. Upon discovery of the roost, the house was fortified and vandalism was greatly reduced. The number of females and the number of volant young greatly increased during our study and was directly correlated with the decline in vandalism. Bats emerged from the house 43.6 (± 10.9 SD ) min after local sunset. Bats emerged later in the evening during spring and fall, when it was warmer, and when it was windier. We also evaluated duration of emergence (47.11 [45.0–49.7] min), and seasonal patterns of re-entry into the roost. Several factors suggested that potential predation, most likely by owls, influenced both the timing and duration of evening emergences.
Northwestern Naturalist↗
Distribution and abundance of Millicoma Dace in the Coos River Basin, Oregon
The Millicoma Dace Rhinichthys cataractae is a form of Longnose Dace endemic to the Coos River drainage in southwestern Oregon. Sparse species records in the Oregon State University Ichthyology Collection and database and infrequent recent encounters prompted surveys to assess the current status and distribution of the species. In 2014, we surveyed locations that had historically supported Millicoma Dace using backpack electrofishing to describe their current distribution and abundance at these locations. In 2015, we extended these surveys further upstream in the South Coos River basin, outside of the documented historical range. We used an N-mixture model to estimate abundance and capture probability for Millicoma Dace at each sampling location. We evaluated the effects of habitat covariates on both capture probability and abundance at each sample site. We found Millicoma Dace were widespread throughout their historical range and in the South Coos River sites outside of their documented historical range. We only found Millicoma Dace associated with native fishes; we did not collect any nonnative fish during our surveys. We collected Millicoma Dace exclusively from swift-water habitats, which were relatively uncommon in the basin, and found them typically associated with cobble or boulder substrates. Millicoma Dace were most abundant in the South Fork Coos and West Fork Millicoma River subbasins. We estimated capture probabilities for Millicoma Dace ranging from 9% when substrate was dominated by bedrock to 28% when substrate was dominated by cobble or gravel. Abundance estimates ranged from 1 to 560 dace per sampling location with a total estimated abundance (sum of site estimates) of over 3200 dace for the sites we sampled.
Oregon↗
Occurrence of amphibians in northern California coastal dune drainages
Many coastal dune ecosystems have been degraded by non-native dune vegetation, but these systems might still provide valuable habitat for some taxa, including amphibians. Because restoration of degraded dune systems is occurring and likely to continue, we examined the occurrence of amphibians in drainages associated with a coastal dune ecosystem degraded by invasive plants (European Beachgrass, Ammophila arenaria , and Iceplant, Carpobrotus edulis ). We found that occupancy of 3 amphibian species (California Red-legged Frog, Rana draytonii ; Sierran Treefrog, Hyliola sierra ; and Rough-skinned Newt, Taricha granulosa ) among 21 coastal-dune drainages was high, with most coastal-dune drainages occupied by all 3 species. Furthermore, reproduction of Sierran Treefrogs and California Red-legged Frogs was estimated to occur in approximately ½ and ⅓ of the drainages, respectively. The probability of occurrence of Rough-skinned Newts and pre-metamorphic life stages of both anurans decreased during the study, perhaps because of ongoing drought in California or precipitation-induced changes in phenology during the final year of the study. Maintaining structural cover and moist features during dune restoration will likely benefit native amphibian populations inhabiting coastal-dune ecosystems.
Northwestern Naturalist↗
Ecology of the Sand Roller (Percopsis transmontana) in a lower Snake River Reservoir, Washington
The Sand Roller ( Percopsis transmontana ), has not been abundant in the Snake River since it was first found in the system in the 1950s, but its population has apparently increased in recent years. As a result, we initiated a study to better understand its ecology in habitats of Lower Granite Reservoir. From November 2014 to October 2015, Sand Rollers were present along shorelines, with peak abundance being observed during spring months. Logistic regression analyses showed that Sand Rollers were more likely to be present in shoreline habitats at temperatures ≤18.4°C. Fish were found over a range of substrates, with the lowest odds of fish presence being associated with riprap, which is common in hydropower reservoirs. From length-frequency analysis, we suggest that Sand Roller spawning occurs primarily in May and early June. Assessment of Sand Roller diets found dipteran (chironomid) larvae and pupae were the most important prey consumed by all sizes of Sand Rollers, but Opossum Shrimp ( Neomysis mercedis ) were also prominent in diets of larger fish in shoreline and offshore habitats. At a time when the populations of so many native species are in decline, the increase of the Sand Roller population in the lower Snake River represents a positive, yet curious occurrence.
Washington↗
Trends in landbird density at two national parks in fragmented, mixed-use landscapes of the Pacific Northwest
National parks play a key role in conserving species by providing landscapes where threats from anthropogenic disturbance are reduced. In a recent study of 3 large wilderness parks in the Pacific Northwest, nearly all landbird species were found to be stable or increasing. Nonetheless, contemporary results from the Breeding Bird Survey and mark-recapture studies fuel concerns that some landbirds in the Pacific Northwest are trending in sync with many North America species in widespread decline. Although landbird populations might be thriving in large parks with extensive old-growth forest, those in smaller parks with less intact wilderness and higher ratios of edge-to-interior habitat might reflect the stressors inherent in more human-dominated landscapes. We conducted landbird point-count surveys from 2005 to 2016 in 2 national historical parks situated in the more human-dominated landscapes of this region, San Juan Island National Historical Park and Lewis and Clark National Historical Park. Established primarily to protect cultural resources, these parks lack old-growth forest and consist of relatively small parcels embedded in fragmented, multi-use landscapes. Here, we apply recent developments in point-count analysis to estimate trends in population density for 50 landbird species commonly detected in these small parks, including lagged effects of precipitation and temperature on the annual density of each species, and effects of survey conditions on species detection. All but 3 species exhibited stable densities in both parks, and more than half of the populations analyzed clearly increased in density over the study period. Notable exceptions were single-park declines in Olive-sided Flycatcher ( Contopus cooperi ), Northern Flicker ( Colaptes anratus ), and Hutton's Vireo ( Vireo huttoni ). Annual variation in population density was often related to climate, with generally positive responses to a recent deficit in annual precipitation-as-snow, and more variable responses to higher mean spring temperature. These results reinforce trends estimated for 3 large national parks in the Pacific Northwest, suggesting recent stability of landbird populations in parks of this region, independent of park size or setting.
Northwestern Naturalist↗