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The ecology, restoration, and management of southeastern floodplain ecosystems: A synthesis

Floodplain ecosystems of the southeastern United States provide numerous services to society, but hydrologic and geomorphic alterations, agricultural practices, water quality and availability, and urban development continue to challenge restorationists and managers at multiple spatial and temporal scales. These challenges are further exacerbated by tremendous uncertainty regarding climate and land use patterns and natural variability in these systems. The symposium from which the papers in 2009 ensued was organized to provide a critical evaluation of current natural resource restoration and management practices to support the sustainability of floodplain ecosystem functions in the southeastern United States. In this paper we synthesize these concepts and evaluate restoration and conservation techniques in light of our understanding of these ecosystems. We also discuss current and future challenges and attempt to identify new approaches that may facilitate the long-term sustainability of southeastern floodplain systems. We conclude that integration of disciplines and approaches is necessary to meet the floodplain conservation challenges of the coming century. Integration will not only include purposeful dialogue between interdisciplinary natural resource professionals, but it also is necessary to sincerely engage the public about goals, objectives, and desirable outcomes of floodplain ecosystem restoration.

Southeastern Floodplain systems

Proceedings of the Klamath Basin Science Conference, Medford, Oregon, February 1-5, 2010

This report presents the proceedings of the Klamath Basin Science Conference (February 2010). A primary purpose of the meeting was to inform and update Klamath Basin stakeholders about areas of scientific progress and accomplishment during the last 5 years. Secondary conference objectives focused on the identification of outstanding information needs and science priorities as they relate to whole watershed management, restoration ecology, and possible reintroduction of Pacific salmon associated with the Klamath Basin Restoration Agreement (KBRA). Information presented in plenary, technical, breakout, and poster sessions has been assembled into chapters that reflect the organization, major themes, and content of the conference. Chapter 1 reviews the major environmental issues and resource management and other stakeholder needs of the basin. Importantly, this assessment of information needs included the possibility of large-scale restoration projects in the future and lessons learned from a case study in South Florida. Other chapters (2-6) summarize information about key components of the Klamath Basin, support conceptual modeling of the aquatic ecosystem (Chapter 7), and synthesize our impressions of the most pressing science priorities for management and restoration. A wealth of information was presented at the conference and this has been captured in chapters addressing environmental setting and human development of the basin, hydrology, watershed processes, fishery resources, and potential effects from climate change. The final chapter (8) culminates in a discussion of many specific research priorities that relate to and bookend the broader management needs and restoration goals identified in Chapter 1. In many instances, the conferees emphasized long-term and process-oriented approaches to watershed science in the basin as planning moves forward.

California, Oregon

Distant neighbors: recent wildfire patterns of the Madrean Sky Islands of southwestern United States and northwestern Mexico

Background Information about contemporary fire regimes across the Sky Island mountain ranges of the Madrean Archipelago Ecoregion in the southwestern United States and northern Mexico can provide insight into how historical fire management and land use have influenced fire regimes, and can be used to guide fuels management, ecological restoration, and habitat conservation. To contribute to a better understanding of spatial and temporal patterns of fires in the region relative to environmental and anthropogenic influences, we augmented existing fire perimeter data for the US by mapping wildfires that occurred in the Mexican Sky Islands from 1985 to 2011. Results A total of 254 fires were identified across the region: 99 fires in Mexico (μ = 3901 ha, σ = 5066 ha) and 155 in the US (μ = 3808 ha, σ = 8368 ha). The Animas, Chiricahua, Huachuca-Patagonia, and Santa Catalina mountains in the US, and El Pinito in Mexico had the highest proportion of total area burned (>50%) relative to Sky Island size. Sky Islands adjacent to the border had the greatest number of fires, and many of these fires were large with complex shapes. Wildfire occurred more often in remote biomes, characterized by evergreen woodlands and conifer forests with cooler, wetter conditions. The five largest fires (>25 000 ha) all occurred during twenty-first century droughts (2002 to 2003 and 2011); four of these were in the US and one in Mexico. Overall, high variation in fire shape and size were observed in both wetter and drier years, contributing to landscape heterogeneity across the region. Conclusions Future research on regional fire patterns, including fire severity, will enhance opportunities for collaborative efforts between countries, improve knowledge about ecological patterns and processes in the borderlands, and support long-term planning and restoration efforts.

Madrean Sky Islands

Flow‐ecology modelling to inform reservoir releases for riparian restoration and management

Linked hydrologic, hydraulic, and ecological models can facilitate planning and implementing water releases from reservoirs to achieve ecological objectives along rivers. We applied a flow‐ecology model, the Ecosystem Functions Model (HEC‐EFM), to the Bill Williams River in southwestern USA to estimate areas suitable for recruitment of riparian tree seedlings in the context of managing flow releases from a large dam for riparian restoration. Ecological variables in the model included timing of seed dispersal, tolerable rates of flow recession, and tolerable duration of inundation following germination and early seedling establishment for native Fremont cottonwood and Goodding's willow, and non‐native tamarisk. Hydrological variables included peak flow timing, rate of flow recession following the peak, and duration of inundation. A one‐dimensional hydraulic model was applied to estimate stage‐discharge relationships along ~58 river kilometres. We then used HEC‐EFM to apply relationships between seedling ecology and streamflow to link hydrological dynamics with ecological response. We developed and validated HEC‐EFM based on an examination of seedling recruitment following an experimental flow release from Alamo Dam in spring 2006. The model predicted the largest area of potential recruitment for cottonwood (280–481 ha), with smaller areas predicted for willow (174–188 ha) and tamarisk (59–60 ha). Correlations between observed and predicted patches with successful seedling recruitment for areas within 40 m of the main channel ranged from 0.66 to 0.94. Finally, we examined arrays of hydrographs to identify which are most conducive to seedling recruitment along the river, given different combinations of peak flow, recession rate, and water volume released. Similar application of this model could be useful for informing reservoir management in the context of riparian restoration along other rivers facing similar challenges.

Arizona

Designing flows to enhance ecosystem functioning in heavily altered rivers

More than a century of dam construction and water development in the western United States has led to extensive ecological alteration of rivers. Growing interest in improving river function is compelling practitioners to consider ecological restoration when managing dams and water extraction. We developed an Ecological Response Model (ERM) for the Cache la Poudre River, northern Colorado, USA, to illuminate effects of current and possible future water management and climate change. We used empirical data and modeled interactions among multiple ecosystem components to capture system-wide insights not possible with the unintegrated models commonly used in environmental assessments. The ERM results showed additional flow regime modification would further alter the structure and function of Poudre River aquatic and riparian ecosystems due to multiple and interacting stressors. Model predictions illustrated that specific peak flow magnitudes in spring and early summer are critical for substrate mobilization, dynamic channel morphology, and overbank flows, with strong subsequent effects on instream and riparian biota that varied seasonally and spatially, allowing exploration of nuanced management scenarios. Instream biological indicators benefitted from higher and more stable base flows and high peak flows, but stable base flows with low peak flows were only half as effective to increase indicators. Improving base flows while reducing peak flows, as currently proposed for the Cache la Poudre River, would further reduce ecosystem function. Modeling showed that even presently depleted annual flow volumes can achieve substantially different ecological outcomes in designed flow scenarios, while still supporting social demands. Model predictions demonstrated that implementing designed flows in a natural pattern, with attention to base and peak flows, may be needed to preserve or improve ecosystem function of the Poudre River. Improved regulatory policies would include preservation of ecosystem-level, flow-related processes and adaptive management when water development projects are considered.

Colorado

Tree mortality response to drought-density interactions suggests opportunities to enhance drought resistance

The future of dry forests around the world is uncertain given predictions that rising temperatures and enhanced aridity will increase drought-induced tree mortality. Using forest management and ecological restoration to reduce density and competition for water offers one of the few pathways that forests managers can potentially minimize drought-induced tree mortality. Competition for water during drought leads to elevated tree mortality in dense stands, although the influence of density on heat-induced stress, and the durations of hot or dry conditions that most impact mortality, remain unclear. Understanding how competition interacts with hot-drought stress is essential to recognize how, where, and how much reducing density can help sustain dry forests in a rapidly changing world. Here, we integrated repeat measurements of 28,881 ponderosa pine trees across the western US (2000-2017) with soil moisture estimates from a water balance model to examine how annual mortality responds to competition, temperature and soil moisture conditions. Tree mortality responded most strongly to basal area, and was elevated in places with high mean temperatures, unusually hot 7-year high temperature anomalies, and unusually dry 8-year low soil moisture anomalies. Mortality was also lower in places that experienced unusually wet 3-year soil moisture anomalies between measurements. Importantly, we found that basal area interacts with temperature and soil moisture, exacerbating mortality during times of stress imposed by high temperature or low moisture. Synthesis and Applications: Our results imply that a 50% reduction in forest basal area could reduce drought-driven tree mortality by 20-80%. The largest impacts of density reduction are seen in areas with high current basal area and places that experience high temperatures and/or severe multiyear droughts. These interactions between competition and drought are critical to understand past and future patterns of tree mortality in the context of climate change, and provide information for resource managers seeking to enhance dry forest drought resistance.

Journal of Applied Ecology.

Land management in the Anthropocene: Is history still relevant?

Ecological restoration, conservation, and land management are often based on comparisons with reference sites or time periods, which are assumed to represent “natural” or “properly functioning” conditions. Such reference conditions can provide a vision of the conservation or management goal and a means to measure progress toward that vision. Although historical ecology has been used successfully to guide resource management in many parts of the world, the continuing relevance of history is now being questioned. Some scientists doubt that lessons from the past can inform management in what may be a dramatically different future, given profound climate change, accelerated land use, and an onslaught of plant and animal invasions.

Conference Paper

Managing macropods without poisoning ecosystems

A recent review of the management of hyperabundant macropods in Australia proposed that expanded professional shooting is likely to lead to better biodiversity and animal welfare outcomes. While the tenets of this general argument are sound, it overlooks one important issue for biodiversity and animal health and welfare: reliance on toxic lead-based ammunition. Lead poisoning poses a major threat to Australia's wildlife scavengers. Current proposals to expand professional macropod shooting would see tonnes of an extremely toxic and persistent heavy metal continue to be introduced into Australian environments. This contrasts with trends in many other countries, where lead ammunition is, through legislation or voluntary programs, being phased out. Fortunately, there are alternatives to lead ammunition that could be investigated and adopted for improved macropod management. A transition to lead-free ammunition would allow the broad environmental and animal welfare goals desired from macropod management to be pursued without secondarily and unintentionally poisoning scavengers. Through this article, we hope to increase awareness of this issue and encourage discussion of this potential change.

Ecological Management & Restoration

Resist-accept-direct (RAD)-A framework for the 21st-century natural resource manager

An assumption of stationarity—i.e. “the idea that natural systems fluctuate within an unchanging envelope of variability” (Milly et al. 2008)—underlies traditional conservation and natural resource management, as evidenced by widespread reliance on ecological baselines to guide protection, restoration, and other management. Although ecological change certainly occurred under the relatively stable conditions of the recent past, the nature of change under intensifying global change is different; it is unidirectional, and rapidly pushing beyond the bounds of historical variability. In the past, a manager could plausibly work to reverse or mitigate many stressors or their impacts to approximate pre-disturbance ecological conditions, but now accelerated warming, changing disturbance regimes, and extreme events associated with climate change reduce that potential. Indeed, even ‘holding the line’ in the face of inexorable human-caused change is ever more difficult and costly. Thus, the convention of using baseline conditions to define goals for today’s resource management is increasingly untenable, presenting practical and philosophical challenges for managers. As formerly familiar ecological conditions continue to change, bringing novelty, surprise, and uncertainty, natural resource managers require a new, shared approach to make conservation decisions. How, for example, should a manager respond to projections of loss of the Joshua tree from much of its current range, or to the emergence of new and different vegetation communities after a large fire event? The RAD (Resist-Accept-Direct) decision framework has emerged over the past decade as a simple tool that captures the entire decision space for responding to ecosystems facing the potential for rapid, irreversible ecological change. It assists managers in making informed, purposeful choices about how to respond to the trajectory of change, and moreover, provides a straightforward approach to support resource managers in collaborating at larger scales across jurisdictions, which today is more urgent than ever.

Natural Resource Report

Maintaining and restoring sustainable ecosystems in southern Nevada

Managers in southern Nevada are challenge with determining appropriate goals and objectives and developing viable approaches for maintaining and restoring sustainable ecosystems in a time of rapid socio-ecological and environmental change. Sustainable or "healthy" ecosystems supply clean air, water and habitat for a diverse array of plants and animals. As described in Chapter 1, sustainable ecosystems retain characteristic processes like hydrological flux and storage, geomorphic processes, biogeochemical cycling and storage, biological activity and productivity, and population regeneration and reproduction over the normal cycle of disturbance events (modified from Chapin and others 1996 and Christensen and others 1996). Ecological restoration of stressed or disturbed ecosystems in an integral part of managing for sustainable ecosystems. The Society of Ecological Restoration International (SERI) defines ecological restoration as the process of assisting the recovery of an ecosystem that has been degraded, damaged, or destroyed (SERI 2004). Many of the southern Nevada's ecosystems are being subjected to anthropogenic stressors that span global, regional, and local scales (Chapter 2)., and are crossing ecological thresholds to new alternative states (Chapter 4 and Chapter 5). These alternative states often represent novel communities with disturbance regimes that differ significantly from historic conditions. Past management and restoration goals often focused on returning ecosystems to pre-disturbance conditions (Harris and others 2006). This approach assumes stable or equilibrium conditions and ignores changes in ecosystems processes due to land uses, increases in CO 2 concentrations, and climate change. A more realistic approach is to base management and restoration goals on the current potential of an ecosystem to support a given set of ecological conditions, and on the likelihood of future change due to warming climate (Harris and others 2006). This approach requires understanding ecosystem resilience to anthropogenic disturbance and climate change, the alternative states that exist for ecosystems, and the factors that result in threshold crossing (Bestelmeyer and others 2009; Hobbs and Harris 2001; Stingham and others 2003; Whisemnant 1999). It also requires the ability to predict how climate is likely to influence ecosystems in the future (Harris and others 2006). This chapter addresses the restoration aspects of Sub-goal 1.3 in the SNAP Science Research Strategy which is to restore and sustain proper function of southern Nevada's watersheds and landscapes (able 1.3; Turner and others 2009). The effects of global, regional and local stresses on southern Nevada ecosystems are presented in Chapter 2. Here, we discuss appropriate objectives and develop guidelines for maintaining and restoring southern Nevada ecosystems. We then discuss the differences in ecological resilience to stress and disturbance and resistance to invasive species in southern Nevada ecosystems and describe restoration and management approaches for the different ecosystem types. We conclude with knowledge gaps and management implications.

Nevada

Narrowing historical uncertainty: probabilistic classification of ambiguously identified tree species in historical forest survey data

Historical data have increasingly become appreciated for insight into the past conditions of ecosystems. Uses of such data include assessing the extent of ecosystem change; deriving ecological baselines for management, restoration, and modeling; and assessing the importance of past conditions on the composition and function of current systems. One historical data set of this type is the Public Land Survey (PLS) of the United States General Land Office, which contains data on multiple tree species, sizes, and distances recorded at each survey point, located at half-mile (0.8 km) intervals on a 1-mi (1.6 km) grid. This survey method was begun in the 1790s on US federal lands extending westward from Ohio. Thus, the data have the potential of providing a view of much of the US landscape from the mid-1800s, and they have been used extensively for this purpose. However, historical data sources, such as those describing the species composition of forests, can often be limited in the detail recorded and the reliability of the data, since the information was often not originally recorded for ecological purposes. Forest trees are sometimes recorded ambiguously, using generic or obscure common names. For the PLS data of northern Wisconsin, USA, we developed a method to classify ambiguously identified tree species using logistic regression analysis, using data on trees that were clearly identified to species and a set of independent predictor variables to build the models. The models were first created on partial data sets for each species and then tested for fit against the remaining data. Validations were conducted using repeated, random subsets of the data. Model prediction accuracy ranged from 81% to 96% in differentiating congeneric species among oak, pine, ash, maple, birch, and elm. Major predictor variables were tree size, associated species, landscape classes indicative of soil type, and spatial location within the study region. Results help to clarify ambiguities formerly present in maps of historic ecosystems for the region and can be applied to PLS datasets elsewhere, as well as other sources of ambiguous historical data. Mapping the newly classified data with ecological land units provides additional information on the distribution, abundance, and associations of tree species, as well as their relationships to environmental gradients before the industrial period, and clarifies the identities of species formerly mapped only to genus. We offer some caveats on the appropriate use of data derived in this way, as well as describing their potential.

Ecosystems

Integrating Sr isotopes, microchemistry, and genetics to reconstruct Salmonidae species and life history

Recent approaches to fisheries research emphasize the importance of the coproduction of knowledge in building resilient and culturally mindful fisheries management frameworks. Despite widespread recognition of the need for Indigenous knowledge and historical reference points as baseline data, archaeological data are rarely included in conservation biology research designs. Here we propose a novel multiproxy method to learn from former fisheries stewards by generating archaeological data on past salmonid population parameters. We used a newly developed, high throughput qPCR (HT-qPCR) chip, originally designed for environmental DNA (eDNA), for species identification of archaeological salmonid vertebrae. We combine this with the laser ablation split-stream (LASS) approach to identify ocean-migration versus freshwater residency. We test this multidisciplinary approach using both contemporary and archaeological salmonid samples and new radiocarbon dates from the Tronsdal Site on the Skagit River, Washington State, USA. This is a useful approach for extracting information about Salmonidae species and life history diversity from archaeological remains to reconstruct historic baselines for several population parameters in anadromous species with long periods of freshwater residency. The approach outlined in this paper may be particularly useful for research investigating past fisheries dynamics, offering hundreds to thousands of years of temporal depth for modern fisheries management, harvest policies, restoration ecology, and conservation biology.

Idaho, Oregon, Washington

High value of ecological information for river connectivity restoration

Context Efficient restoration of longitudinal river connectivity relies on barrier mitigation prioritization tools that incorporate stream network spatial structure to maximize ecological benefits given limited resources. Typically, ecological benefits of barrier mitigation are measured using proxies such as the amount of accessible riverine habitat. Objectives We developed an optimization approach for barrier mitigation planning which directly incorporates the ecology of managed taxa, and applied it to an urbanizing salmon-bearing watershed in Alaska. Methods A novel river connectivity metric that exploits information on the distribution and movement of managed taxon was embedded into a barrier prioritization framework to identify optimal mitigation actions given limited restoration budgets. The value of ecological information on managed taxa was estimated by comparing costs to achieve restoration targets across alternative barrier prioritization approaches. Results Barrier mitigation solutions informed by life history information outperformed those using only river connectivity proxies, demonstrating high value of ecological information for watershed restoration. In our study area, information on salmon ecology was typically valued at 0.8–1.2 M USD in costs savings to achieve a given benefit level relative to solutions derived only from stream network information, equating to 16–28% of the restoration budget. Conclusions Investing in ecological studies may achieve win–win outcomes of improved understanding of aquatic ecology and greater watershed restoration efficiency.

Alaska

Federal collaboration in science for invasive mammal management in U.S. National Parks and Wildlife Refuges of the Pacific Islands

Some of the most isolated islands in the Pacific Ocean are home to US National Parks and Wildlife Refuges. These islands are known for flora and fauna that occur nowhere else, but also for invasive species and other factors which have resulted in the disproportionate extinction of native species. The control of invasive mammals is the single most expensive natural resource management activity essential for restoring ecological integrity to parks in the Hawaiian Islands, American Samoa, and the islands of Guam and Saipan. Science-based applications supporting management efforts have been shaped by longstanding collaborative federal research programs over the past four decades. Consequently, feral goats (Capra hircus) have been removed from >690 km2 in National Parks, and feral pigs (Sus scrofa) have been removed from >367 km2 of federal lands of Hawai‘i, bringing about the gradual recovery of forest ecosystems. The exclusion of other non-native ungulates and invasive mammals is now being undertaken with more sophisticated control techniques and fences. New fence designs are now capable of excluding feral cats (Felis catus) from large areas to protect endangered native waterfowl and nesting seabirds. Rodenticides which have been tested and registered for hand and aerial broadcast in Hawai‘i have been used to eradicate rats from small offshore islands to protect nesting seabirds and are now being applied to montane environments of larger islands to protect forest birds. Forward-looking infrared radar (FLIR) is also being applied to locate wild ungulates which were more recently introduced to some islands. All invasive mammals have been eradicated from some remote small islands, and it may soon be possible to manage areas on larger islands to be free of invasive mammals at least during seasonally important periods for native species.

Conference Paper

A Tour de Force by Hawaii's invasive mammals: establishment, takeover, ecosystem restoration through eradication

Invasive mammals, large and small, have irreversibly altered Hawaii's ecosystems in numerous cases through unnatural herbivory, predation, and the transmission of zoonotic diseases, thereby causing the disproportionate extinction of flora and fauna that occur nowhere else on Earth. The control and eradication of invasive mammals is the single most expensive management activity necessary for restoring ecological integrity to many natural areas of Hawai'i and other Pacific Islands, and has already advanced the restoration of native biota. Science applications supporting management efforts have been shaped by longstanding collaborative federal research programs over the past four decades. Consequently, feral goats have been removed from > l ,3 58 km2, and feral pigs have been removed from >723 km2 of lands in Hawai'i, bringing about the gradual recovery of forest ecosystems. The exclusion of other non-native ungulates and invasive mammals is now being undertaken with more sophisticated control techniques and fences. New fence designs are now capable of excluding feral cats from large areas to protect endangered native waterfowl and nesting seabirds. Rodenticides that have been tested and registered for hand and aerial broadcast in Hawai'i have been used to eradicate rats from small offshore islands to protect nesting seabirds and are now being applied to montane environment of larger islands to protect forest birds. Forward-looking infrared radar is also being applied to locate cryptic wild ungulates that were more recently introduced to some islands. All invasive mammals have been eradicated from some smaller islands, resulting in the restoration of some ecosystem processes such as natural forest regeneration, but changes in other processes such as fire regimes and nutrient cycling remain more difficult to reverse at larger landscape scales. It may soon be possible to manage areas on larger islands to be free of invasive mammals at least during seasonally important periods for native species, but at the same time, new mammal introductions continue to occur.

Hawaii

Riparian vegetation response amid variable climate conditions across the Upper Gila River watershed: Informing Tribal restoration priorities

Riparian systems across the Southwest United States are extremely valuable for the human and ecological communities that engage with them. However, they have experienced substantial changes and stresses over the past century, including non-native vegetation expansion, vegetation die-offs, and increased fire activity. Vegetation management approaches, such as ecological restoration, may address some of these stressors as well as reduce the risk of future impacts. We apply remote sensing to inform restoration priorities along the upper Gila River within the San Carlos Apache Reservation and Upper Gila River watershed. First, we develop a spatially and temporally explicit trend analysis across three observed climate periods (1985–1993, 1993–2014, 2014–2021) using the Landsat-derived indices to quantify changes in riparian vegetation conditions. These maps can be used to identify areas potentially more at risk for degradation. Second, we analyze changes in riparian vegetation within a climate framework to better understand trends and the potential effect of climate change. Vegetation greenness has largely increased throughout the watershed despite intensifying drought conditions across our study period, though areas within the lower watershed have shown increased stress and higher rates of wildfire and other disturbances over the past 5-years. Nevertheless, small-scale restoration activities appear to show improving vegetation conditions, suggesting efficacy of these restoration activities. Results from this study may be integrated with restoration objectives to develop a restoration plan that will help riparian vegetation communities adapt to change.

Arizona

Bridging ecology and geosciences in riverscapes: Implications for process-based restoration

There has been a growing interest in integrating geological and ecological processes for sustainable river management and restoration. Lotic systems are shaped by diverse physical processes, including geology, geomorphology, hydrology, and interactions with terrestrial processes. However, restoration practices often prioritize specific habitats or river forms without fully considering the underlying physical processes that support biological communities and ecosystem functions. In this paper, we synthesize studies that integrally examine geological and ecological processes across different scales and components of riverscapes, including geohydrological processes, which have been less investigated in riverscape studies. We begin by examining processes at broader spatial scales, including river–watershed and river–riparian interactions, and gradually narrow our focus to the dynamics that occur among habitats within river channels, through which we highlight the significance of conceptualizing rivers as dynamic “networks” rather than linear features. Finally, we identify both scientific and practical challenges that can be addressed to bridge the gap between basic-science implications and their implementation in riverscape restorations.

Ecological Research