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Geomorphometry-Diversity in quantitative surface analysis

A widening variety of applications is diversifying geomorphometry ( digital terrain modelling ), the quantitative study of topography. An amalgam of earth science, mathematics, engineering and computer science, the discipline has been revolutionized by the computer manipulation of gridded terrain heights, or digital elevation models (DEMs). Its rapid expansion continues. This article reviews the remarkable diversity of recent morphometric work in 15 selected topics and discusses their significance and prospects. The quantitative analysis of industrial microsurface topography is introduced to the earth science community. The 14 other topics are Internet access to geomorphometry; global DEMs; DEM modelling of channel networks; self-organized criticality; fractal and wavelet analysis; soil resources; landslide hazards; barchan dunes; harvesting wind energy; sea-ice surfaces; sea-floor abyssal hills; Japanese work in morphometry; and the emerging fields of landscape ecology and image understanding. Closing remarks note reasons for the diversity within geomorphometry, speculate on future trends and recommend creating a unified field of surface representation.

Progress in Physical Geography: Earth and Environm

A bibliography of terrain modeling (geomorphometry), the quantitative representation of topography: Supplement 4.0

Terrain modeling, the practice of ground-surface quantification, is an amalgam of Earth science, mathematics, engineering, and computer science. The discipline is known variously as geomorphometry (or simply morphometry), terrain analysis, and quantitative geomorphology. It continues to grow through myriad applications to hydrology, geohazards mapping, tectonics, sea-floor and planetary exploration, and other fields. Dating nominally to the co-founders of academic geography, Alexander von Humboldt (1808, 1817) and Carl Ritter (1826, 1828), the field was revolutionized late in the 20th Century by the computer manipulation of spatial arrays of terrain heights, or digital elevation models (DEMs), which can quantify and portray ground-surface form over large areas (Maune, 2001). Morphometric procedures are implemented routinely by commercial geographic information systems (GIS) as well as specialized software (Harvey and Eash, 1996; Köthe and others, 1996; ESRI, 1997; Drzewiecki et al., 1999; Dikau and Saurer, 1999; Djokic and Maidment, 2000; Wilson and Gallant, 2000; Breuer, 2001; Guth, 2001; Eastman, 2002). The new Earth Surface edition of the Journal of Geophysical Research, specializing in surficial processes, is the latest of many publication venues for terrain modeling. This is the fourth update of a bibliography and introduction to terrain modeling (Pike, 1993, 1995, 1996, 1999) designed to collect the diverse, scattered literature on surface measurement as a resource for the research community. The use of DEMs in science and technology continues to accelerate and diversify (Pike, 2000a). New work appears so frequently that a sampling must suffice to represent the vast literature. This report adds 1636 entries to the 4374 in the four earlier publications1. Forty-eight additional entries correct dead Internet links and other errors found in the prior listings. Chronicling the history of terrain modeling, many entries in this report predate the 1999 supplement. Coverage is representative from about 1800 through early–mid 2002. Papers increasingly are published exclusively or in duplicate on the Internet's World Wide Web; the dates given here for Web addresses (URLs) that lack a print publication indicate a Web site's last update or my last access of it. The bibliography is arranged alphabetically and thus is not readily summarized. This introduction cites about 500 entries, a third of them grouped under 24 morphometric topics, as a guide to the listing's contents. Continuing the practice of previous bibliographies in the series to provide more information on a few applications (see summary of past topics in Pike, 2000a), this report elaborates further on topographic data, putative new parameters, tectonic geomorphology/neo-orometry, biogeography, ice-cap morphometry, results from the Mars Global DEM, landslide-hazard mapping, terrain modeling as physics, Hack's law, and broad-scale computer visualization. The literature of some of these subjects is large, and none of the summaries is intended to more than introduce the topic and comment on some of the current contributions of terrain modeling. Closing the essay is a discussion of pre-1900 papers that trace the evolution of ridge-line and watercourse quantification by descriptive geometry, as well as comments on some new books and an on-line bulletin board.

Open-File Report

Partnership of Environmental Education and Research-A compilation of student research, 1999-2008

The U.S. Geological Survey (USGS) Tennessee Water Science Center and the College of Engineering and Technology at Tennessee State University developed a Partnership in Environmental Education and Research (PEER) to support environmental research at TSU and to expand the environmental research capabilities of the USGS in Tennessee. The PEER program is driven by the research needs to better define the occurrence, fate, and transport of contaminants in groundwater and surface water. Research in the PEER program has primarily focused on the transport and remediation of organic contamination in karst settings. Research conducted through the program has also expanded to a variety of media and settings. Research areas include contaminant occurrence and transport, natural and enhanced bioremediation, geochemical conditions in karst aquifers, mathematical modeling for contaminant transport and degradation, new methods to evaluate groundwater contamination, the resuspension of bacteria from sediment in streams, the use of bioluminescence and chemiluminescence to identify the presence of contaminants, and contaminant remediation in wetlands. The PEER program has increased research and education opportunities for students in the College of Engineering, Technology, and Computer Science and has provided students with experience in presenting the results of their research. Students in the program have participated in state, regional, national and international conferences with more than 140 presentations since 1998 and more than 40 student awards. The PEER program also supports TSU outreach activities and efforts to increase minority participation in environmental and earth science programs at the undergraduate and graduate levels. TSU students and USGS staff participate in the TSU summer programs for elementary and high school students to promote earth sciences. The 2007 summer camps included more than 130 students from 20 different States and Washington DC.

Tennessee

Partly cloudy with a chance of migration: Weather, radars, and aeroecology

Aeroecology is an emerging scientific discipline that integrates atmospheric science, Earth science, geography, ecology, computer science, computational biology, and engineering to further the understanding of biological patterns and processes. The unifying concept underlying this new transdisciplinary field of study is a focus on the planetary boundary layer and lower free atmosphere (i.e., the aerosphere), and the diversity of airborne organisms that inhabit and depend on the aerosphere for their existence. Here, we focus on the role of radars and radar networks in aeroecological studies. Radar systems scanning the atmosphere are primarily used to monitor weather conditions and track the location and movements of aircraft. However, radar echoes regularly contain signals from other sources, such as airborne birds, bats, and arthropods. We briefly discuss how radar observations can be and have been used to study a variety of airborne organisms and examine some of the many potential benefits likely to arise from radar aeroecology for meteorological and biological research over a wide range of spatial and temporal scales. Radar systems are becoming increasingly sophisticated with the advent of innovative signal processing and dual-polarimetric capabilities. These capabilities should be better harnessed to promote both meteorological and aeroecological research and to explore the interface between these two broad disciplines. We strongly encourage close collaboration among meteorologists, radar scientists, biologists, and others toward developing radar products that will contribute to a better understanding of airborne fauna.

Bulletin of the American Meteorological Society

Cloud-native repositories for big scientific data

Scientific data have traditionally been distributed via downloads from data server to local computer. This way of working suffers from limitations as scientific datasets grow toward the petabyte scale. A “cloud-native data repository,” as defined in this article, offers several advantages over traditional data repositories—performance, reliability, cost-effectiveness, collaboration, reproducibility, creativity, downstream impacts, and access and inclusion. These objectives motivate a set of best practices for cloud-native data repositories: analysis-ready data, cloud-optimized (ARCO) formats, and loose coupling with data-proximate computing. The Pangeo Project has developed a prototype implementation of these principles by using open-source scientific Python tools. By providing an ARCO data catalog together with on-demand, scalable distributed computing, Pangeo enables users to process big data at rates exceeding 10 GB/s. Several challenges must be resolved in order to realize cloud computing’s full potential for scientific research, such as organizing funding, training users, and enforcing data privacy requirements.

Computing in Science and Engineering

The path to FAIR research models: Lessons learned

Numerical modeling of Earth surface processes emerged as an important scientific tool in the late 1960s to mid-1970s, driven by the development of finite element methods in computer science. These advancements, initially applied in civil engineering, enabled scientists to simulate complex geological phenomena. At that time, models were often only described in publications, access was limited to researchers with direct connections to the developers, and the code was rarely documented for reuse, limiting their application beyond the original research context. The FAIR principles (Findability, Accessibility, Interoperability, and Reusability) as applied to data began to take shape in the 21st century with the rise of open science, digital repositories, and standardized data sharing frameworks. In the late 2010s, grassroots movements began to apply some of the FAIRness goals to numerical models. Subsequently, more formalized FAIR model principles were developed that addressed the specific needs of the scientific modeling community, resulting in the formulation of the FAIR principles for research software (FAIR4RS). In this study, we examine the development and implementation of strategies by two geoscience research infrastructures – the CSDMS (Community Surface Dynamics Modeling System) Model Repository and the U.S. Geological Survey Model Catalog – to enhance the FAIRness of models guided by FAIR4RS. Some of the development and implementation efforts described predate the formalization of FAIR and FAIR4RS principles, making this an ongoing and adaptive process. We evaluate the temporal progression towards increased FAIR4RS alignment across three phases of research infrastructure development: prototype, refinement, and growth and iteration. Although certain principles were more straightforward to implement early in prototypes of the catalog infrastructures, others required broader community collaboration during refinement, and some continue to pose practical challenges in the growth and iteration phase. By tracing these dynamics, our aim is to provide insights that can guide other modeling initiatives in effectively adopting FAIR4RS principles within their communities.

Geoscientific Model Development

Engineering uses of physics-based ground motion simulations

This paper summarizes validation methodologies focused on enabling ground motion simulations to be used with confidence in engineering applications such as seismic hazard analysis and dynmaic analysis of structural and geotechnical systems. Numberical simullation of ground motion from large erthquakes, utilizing physics-based models of earthquake rupture and wave propagation, is an area of active research in the earth science community. Refinement and validatoin of these models require collaboration between earthquake scientists and engineering users, and testing/rating methodolgies for simulated ground motions to be used with confidence in engineering applications. This paper provides an introduction to this field and an overview of current research activities being coordinated by the Souther California Earthquake Center (SCEC). These activities are related both to advancing the science and computational infrastructure needed to produce ground motion simulations, as well as to engineering validation procedures. Current research areas and anticipated future achievements are also discussed.

Conference Paper

Hydraulic modeling development and application in water resources engineering

The use of modeling has become widespread in water resources engineering and science to study rivers, lakes, estuaries, and coastal regions. For example, computer models are commonly used to forecast anthropogenic effects on the environment, and to help provide advanced mitigation measures against catastrophic events such as natural and dam-break floods. Linking hydraulic models to vegetation and habitat models has expanded their use in multidisciplinary applications to the riparian corridor. Implementation of these models in software packages on personal desktop computers has made them accessible to the general engineering community, and their use has been popularized by the need of minimal training due to intuitive graphical user interface front ends. Models are, however, complex and nontrivial, to the extent that even common terminology is sometimes ambiguous and often applied incorrectly. In fact, many efforts are currently under way in order to standardize terminology and offer guidelines for good practice, but none has yet reached unanimous acceptance. This chapter provides a view of the elements involved in modeling surface flows for the application in environmental water resources engineering. It presents the concepts and steps necessary for rational model development and use by starting with the exploration of the ideas involved in defining a model. Tangible form of those ideas is provided by the development of a mathematical and corresponding numerical hydraulic model, which is given with a substantial amount of detail. The issues of model deployment in a practical and productive work environment are also addressed. The chapter ends by presenting a few model applications highlighting the need for good quality control in model validation.

Book chapter

Groundwater

Introduction Groundwater represents the terrestrial subsurface component of the hydrologic cycle. As such, groundwater is generally in motion, moving from elevated areas of recharge to lower areas of discharge. Groundwater usually moves in accordance with Darcy’s law (Dalmont, Paris: Les Fontaines Publiques de la Ville de Dijon, 1856). Groundwater residence times can be under a day in small upland catchments to over a million years in subcontinental-sized desert basins. The broadest definition of groundwater includes water in the unsaturated zone, considered briefly here. Water chemically bound to minerals, as in gypsum (CaSO 4 • 2H 2 O) or hydrated clays, cannot flow in response to gradients in total hydraulic head (pressure head plus elevation head); such water is thus usually excluded from consideration as groundwater. In 1940, M. King Hubbert showed Darcy’s law to be a special case of thermodynamically based potential field equations governing fluid motion, thereby establishing groundwater hydraulics as a rigorous engineering science ( Journal of Geology 48, pp. 785–944). The development of computer-enabled numerical methods for solving the field equations with real-world approximating geometries and boundary conditions in the mid-1960s ushered in the era of digital groundwater modeling. An estimated 30 percent of global fresh water is groundwater, compared to 0.3 percent that is surface water, 0.04 percent atmospheric water, and 70 percent that exists as ice, including permafrost ( Shiklomanov and Rodda 2004 , cited under Groundwater Occurrence ). Groundwater thus constitutes the vast majority—over 98 percent—of the unfrozen fresh-water resources of the planet, excluding surface-water reservoirs. Environmental dimensions of groundwater are equally large, receiving attention on multiple disciplinary fronts. Riparian, streambed, and spring-pool habitats can be sensitively dependent on the amount and quality of groundwater inputs that modulate temperature and solutes, including nutrients and dissolved oxygen. Groundwater withdrawals can negatively impact riparian habitats by depriving ecosystems of adequate fresh water and fragmenting communities when streams go dry. Biochemical reactions in shallow groundwater can remove anthropogenically elevated nitrogen compounds and reduce—but only to a point—the greening of waterways and shorelines with periphyton and harmful algal blooms. Groundwater extraction for beneficial use is increasingly limited by water-quality constraints imposed by naturally occurring and introduced substances. Overdrafting can cause land-surface subsidence, damaging buildings and roads and disrupting canals, sewers, and other gravity-flow conveyances. Increases in groundwater levels can cause soil salinization in dry regions and erosive sapping and flooding in wet regions. Coastal saltwater intrusion, groundwater flooding, salinization associated with groundwater-irrigated agriculture, induced seismicity from injected wastes, and the detrimental impacts of groundwater depletion are among the major environmental challenges of our time.

Book chapter

Texture-based automated lithological classification using aeromagnetic anomaly images

This report consists of a thesis submitted to the faculty of the Department of Electrical and Computer Engineering, in partial fulfillment of the requirements for the degree of Master of Science, Graduate College, The University of Arizona, 2004 Aeromagnetic anomaly images are geophysical prospecting tools frequently used in the exploration of metalliferous minerals and hydrocarbons. The amplitude and texture content of these images provide a wealth of information to geophysicists who attempt to delineate the nature of the Earth's upper crust. These images prove to be extremely useful in remote areas and locations where the minerals of interest are concealed by basin fill. Typically, geophysicists compile a suite of aeromagnetic anomaly images, derived from amplitude and texture measurement operations, in order to obtain a qualitative interpretation of the lithological (rock) structure. Texture measures have proven to be especially capable of capturing the magnetic anomaly signature of unique lithological units. We performed a quantitative study to explore the possibility of using texture measures as input to a machine vision system in order to achieve automated classification of lithological units. This work demonstrated a significant improvement in classification accuracy over random guessing based on a priori probabilities. Additionally, a quantitative comparison between the performances of five classes of texture measures in their ability to discriminate lithological units was achieved.

Arizona

Models, validation, and applied geochemistry: Issues in science, communication, and philosophy

Models have become so fashionable that many scientists and engineers cannot imagine working without them. The predominant use of computer codes to execute model calculations has blurred the distinction between code and model. The recent controversy regarding model validation has brought into question what we mean by a ‘model’ and by ‘validation.’ It has become apparent that the usual meaning of validation may be common in engineering practice and seems useful in legal practice but it is contrary to scientific practice and brings into question our understanding of science and how it can best be applied to such problems as hazardous waste characterization, remediation, and aqueous geochemistry in general. This review summarizes arguments against using the phrase model validation and examines efforts to validate models for high-level radioactive waste management and for permitting and monitoring open-pit mines. Part of the controversy comes from a misunderstanding of ‘prediction’ and the need to distinguish logical from temporal prediction. Another problem stems from the difference in the engineering approach contrasted with the scientific approach. The reductionist influence on the way we approach environmental investigations also limits our ability to model the interconnected nature of reality. Guidelines are proposed to improve our perceptions and proper utilization of models. Use of the word ‘validation’ is strongly discouraged when discussing model reliability.

Applied Geochemistry

Water priorities for the nation—The U.S. Geological Survey next generation water observing system

The challenges of providing safe and sustainable water supplies for human and ecological uses and protecting lives and property during water emergencies are well recognized. The U.S. Geological Survey (USGS) plays an essential role in meeting these challenges through its observational networks and renowned water science and research activities (National Academies of Science, Engineering, and Medicine, 2018). Substantial advances in water science, together with emerging breakthroughs in technical and computational capabilities, have led the USGS to develop a Next Generation Water Observing System (NGWOS) . The NGWOS will provide real-time data on water quantity and quality in more affordable and rapid ways than previously possible, and in more locations. The data will be served through a modernized USGS National Water Information System that will be coupled to advanced modeling tools to inform daily water operations, decision-making during water emergencies (like floods, droughts, and contaminant spills), assessments of past trends in water quantity and quality, and forecasts of future water availability.

Fact Sheet

A snapshot of women of the U.S. Geological Survey in STEM and related careers

Introduction The term “STEM” has been used to group together the fields of science, technology, engineering, and mathematics and to describe education and professions related to these fields. The professional fields connected to STEM education are thought of as engineering, medicine, and computer technology. Yet these professional fields are merely the tip of the iceberg. Numerous opportunities in these fields encompass environmental research. The possibilities range from predicting the next earthquake to saving polar bears from extinction to developing a vaccine for salmon measles. The science of natural systems is complex and often requires people from a variety of fields of expertise to make headway with a solution. To that end, the U.S. Geological Survey (USGS) has long recognized the need for a diversity of STEM expertise to address the Nation’s environmental research needs and the vision to facilitate integration of these fields. We are team builders! In this book, we point out the many facets of research carried out by USGS STEM scientists in an effort to show career options and pathways not typically pursued. The women portrayed were selected by USGS associate and regional directors as representative of particular fields and to inspire future generations.

Circular

Improving the operational simplified surface energy balance evapotranspiration model using the forcing and normalizing operation

Actual evapotranspiration modeling is providing useful information for researchers and resource managers in agriculture and water resources around the world. The performance of models depends on the accuracy of forcing inputs and model parameters. We developed an improved approach to the parameterization of the Operational Simplified Surface Energy Balance (SSEBop) model using the Forcing and Normalizing Operation (FANO). SSEBop has two key model parameters that define the model boundary conditions. The FANO algorithm computes the wet-bulb boundary condition using a linear FANO Equation relating surface temperature, surface psychrometric constant, and the Normalized Difference Vegetation Index (NDVI). The FANO parameterization was implemented on two computing platforms using Landsat and gridded meteorological datasets: (1) Google Earth Engine (GEE) and (2) Earth Resources Observation and Science (EROS) Center Science Processing Architecture (ESPA). Evaluation was conducted by comparing modeled actual evapotranspiration ( ETa ) estimates with AmeriFlux eddy covariance (EC) and water balance ETa from level-8 Hydrologic Unit Code sub-basins in the conterminous United States. FANO brought substantial improvements in model accuracy and operational implementation. Compared to the earlier version (v0.1.7), SSEBop FANO (v0.2.6) reduced grassland bias from 47% to −2% while maintaining comparable bias for croplands (11% versus −7%) against EC data. A water balance-based ETa bias evaluation showed an overall improvement from 7% to −1%. Climatology versus annual gridded reference evapotranspiration ( ETr ) produced comparable ETa results, justifying the use of climatology ETr for the global SSEBop Landsat ETa that is accessible through the ESPA website. Besides improvements in model accuracy, SSEBop FANO increases the spatiotemporal coverage of ET modeling due to the elimination of high NDVI requirements for model parameterization. Because of the existence of potential biases from forcing inputs and model parameters, continued evaluation and bias corrections are necessary to improve the absolute magnitude of ETa for localized water budget applications.

Remote Sensing

Science in support of the Deepwater Horizon response

This introduction to the Special Feature presents the context for science during the Deepwater Horizon oil spill response, summarizes how scientific knowledge was integrated across disciplines and statutory responsibilities, identifies areas where scientific information was accurate and where it was not, and considers lessons learned and recommendations for future research and response. Scientific information was integrated within and across federal and state agencies, with input from nongovernmental scientists, across a diverse portfolio of needs—stopping the flow of oil, estimating the amount of oil, capturing and recovering the oil, tracking and forecasting surface oil, protecting coastal and oceanic wildlife and habitat, managing fisheries, and protecting the safety of seafood. Disciplines involved included atmospheric, oceanographic, biogeochemical, ecological, health, biological, and chemical sciences, physics, geology, and mechanical and chemical engineering. Platforms ranged from satellites and planes to ships, buoys, gliders, and remotely operated vehicles to laboratories and computer simulations. The unprecedented response effort depended directly on intense and extensive scientific and engineering data, information, and advice. Many valuable lessons were learned that should be applied to future events.

Alabama, Florida, Louisiana, Mississippi, Texas

Shear velocity criterion for incipient motion of sediment

The prediction of incipient motion has had great importance to the theory of sediment transport. The most commonly used methods are based on the concept of critical shear stress and employ an approach similar, or identical, to the Shields diagram. An alternative method that uses the movability number, defined as the ratio of the shear velocity to the particle’s settling velocity, was employed in this study. A large amount of experimental data were used to develop an empirical incipient motion criterion based on the movability number. It is shown that this approach can provide a simple and accurate method of computing the threshold condition for sediment motion.

Water Science and Engineering

Modeling hazardous mass flows Geoflows09: Mathematical and computational aspects of modeling hazardous geophysical mass flows; Seattle, Washington, 9–11 March 2009

A recent workshop at the University of Washington focused on mathematical and computational aspects of modeling the dynamics of dense, gravity-driven mass movements such as rock avalanches and debris flows. About 30 participants came from seven countries and brought diverse backgrounds in geophysics; geology; physics; applied and computational mathematics; and civil, mechanical, and geotechnical engineering. The workshop was cosponsored by the U.S. Geological Survey Volcano Hazards Program, by the U.S. National Science Foundation through a Vertical Integration of Research and Education (VIGRE) in the Mathematical Sciences grant to the University of Washington, and by the Pacific Institute for the Mathematical Sciences. It began with a day of lectures open to the academic community at large and concluded with 2 days of focused discussions and collaborative work among the participants.

Eos, Earth and Space Science News

Archiving and access systems for remote sensing: Chapter 6

Focuses on major developments inaugurated by the Committee on Earth Observation Satellites, the Group on Earth Observations System of Systems, and the International Council for Science World Data System at the global level; initiatives at national levels to create data centers (e.g. the National Aeronautics and Space Administration (NASA) Distributed Active Archive Centers and other international space agency counterparts), and non-government systems (e.g. Center for International Earth Science Information Network). Other major elements focus on emerging tool sets, requirements for metadata, data storage and refresh methods, the rise of cloud computing, and questions about what and how much data should be saved. The sub-sections of the chapter address topics relevant to the science, engineering and standards used for state-of-the-art operational and experimental systems.

Book chapter