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Regional lists of plant species that occur in wetlands: data base user's guide

The Data Base List of Plant Species that Occur in Wetlands (LIST) currently contains records for 6,728 plant species. Each record provides information on nomenclature, plant characteristics and lifeforms, distribution, and frequency of occurrence in wetlands. The List of Plant Species that Occur in Wetlands, developed to supplement the U.S. Fish and Wildlife Service's Classification of Wetlands and Deepwater Habitats of the United States (Cowardin et al. 1979), underwent an intensive review by field botanists across the country. This review was coordinated by national and regional interagency wetland plant list review panels composed of representatives from the U. S. Fish and Wildlife Service, U. S. Army Corps of Engineers, Soil Conservation Service, and the Environmental Protection Agency. Initial and updated versions of the Data Base List of Plant Species that Occur in Wetlands are available in hardcopy (Reed 1986, 1988). Regional lists are available as U.S. Fish and Wildlife Service Biological Report Series 88(26.126.13). State lists are available as National Ecology Research Center Report Series 88(18.01-18.50). The computerized data base tracks and documents indicator assignments made by regional interagency review panels and facilitates generation of reports. This user's guide describes the format and contents of the LIST Data Base. The Data Base is available on 5-1/4" floppy disks in ASCII format for use with a data base management system on an IBM PC/XT/AT compatible computer. The LIST Data Base was developed using the QUICKTEXT Data Base Management System (Osborn and Strong 1984). Use of QUICKTEXT with the LIST Data Base is strongly recommended. Instructions for loading LIST into QUICKTEXT are included in this user's guide. Other data base management systems capable of handling variable length fields can be used by individuals familiar with these software packages. LIST distribution disks are available for 13 regions (Table 1). QUICKTEXT (course QT100--Data Base Management Techniques) and regional subsets of the LIST Data Base (distributed as self-tutorial courses, Table 1) are available through the Office of Conference Services, Colorado State University.

Report

Species profiles: Life histories and environmental requirements of coastal fishes and invertebrates (Pacific Northwest)--ghost and blue mud shrimp

Geographic range: The ghost shrimp is found in intertidal areas along the west coast of North America from Mutiny Bay, Alaska, to the mouth of the Tijuana River, San Diego County, California; MacGinitie (1934) and Ricketts and Calvin (1968) reported finding specimens as far south as El Estuario de Punto Banda, Baja California Norte, Mexico. The blue mud shrimp is found from southeastern Alaska to San Quentin Bay (Bahia de San Quentin) in Baja California Norte. The general distribution of the two species in the Pacific Northwest is identical (Figure 3).

California, Oregon, Washington

The ecology of the soft-bottom benthos of San Francisco Bay: a community profile

This profile, part of a series of profiles concerning coastal habitats of the United States, is a detailed examination of the soft-bottom benthos of San Francisco Bay. A U.S. Fish and Wildlife Service and California Department of Fish and Game report (1979) entitled "Protection and Restoration of San Francisco Bay Fish and Wildlife Habitat" provides clear recognition of the importance of intertidal and subtidal soft-bottom habitats and their associated organisms to the bay's birds and fishes and to the overall functioning of the estuary. The purpose of this profile is to provide a description of the structure and functioning of the benthic community in San Francisco Bay (exclusive of its tidal marshes, which are discussed by M. Josselyn [1983] in another profile). The habitats covered in this volume include all nonvegetated soft-bottom intertidal and subtidal areas of the bay between the Golden Gate and the mouths of the Sacramento and San Joaquin Rivers to the northeast, and to the southern extremity of the bay. The profile provides a reference to the scientific information concerning the animals and plants of the bay's benthic communities, their importance to the bay ecosystem, and their value as a resource measured in human terms. Because there have been few process-oriented studies of the benthos of San Francisco Bay (e.g., field and laboratory rate-measurement experiments), the material presented herein is largely descriptive. Nonetheless, we have described the processes that interconnect the various physical, chemical, and biological components of the benthic environment, and the important couplings between this environment and the water column above, with reference to research results from other estuaries where necessary. We consider the role of the benthic community as a food source for fish, aquatic birds, and humans; as a consumer or degrader of organic materials including wastes; as a recycler of minerals and nutrients; and as an accumulator of pollutants.

California

Residues and trends of organochlorine pesticide and polychlorinated biphenyls in birds from Texas, 1965-88

Concentrations of DDE (a metabolite of DDT) in birds decreased during recent years in most areas of the continental United States. Organochlorine pesticides were widely used in agriculture in Texas from the early 1950s to the 1970s. I used previously published data to determine whether concentrations of DDE and polychlorinated biphenyls (PCBs) in birds from Texas have followed a decreasing trend similar to that in birds from other areas in the United States. A total of 2,669 bird samples was collected between 1965 and 1988 from diverse locations in Texas and was analyzed for organochlorines and other environmental contaminants. The brown pelican ( Pelecanus occidentalis ), peregrine falcon ( Falco peregrinus ), laughing gull ( Larus atricilla ), black skimmer ( Rynchops niger ), and European starling ( Sturnus vulgaris ) were the most frequently studied species. DDE and PCBs were the most commonly detected organochlorines in bird tissues. Mean DDE concentrations ranged from 0.4 to 61.00 parts per million (ppm) wet weight (ww) and PCBs from 0.02 to 32.00 ppm ww. Concentrations of DDE in eggs and carcasses of black skimmers decreased significantly during 1970-84 and dropped from approximately 10 to nearly 3 ppm ww. PCBs decreased from approximately 7 ppm ww to 1 ppm ww in eggs and carcasses. DDE concentrations in eggs of brown pelicans varied from more than 3 ppm ww in 1970 to approximately 1 ppm ww in 1983; and PCB concentrations diminished from about 10 to 1 ppm ww. Decreasing trends in concentrations of DDE and PBCs were observed in most species, although in some cases, the estimated trends were not significantly different from zero. Concentrations of DDE in birds from the Texas coast decreased from more than 6.0 ppm in 1978 to below 0.5 ppm in 1985. The decreasing ratios in selected species varied from approximately 2.0 to 12.0 (DDE) and from 4.5 to 9.0 (PCBs). The results indicate that in general from 1965 to 1988, DDE and PCBs declined in birds from Texas.

Texas

The ecology of Humboldt Bay, California, an estuarine profile

Synthesizes data on the ecological relationships and functions of the estuary, including information on physical aspects of the bay environment; describes the biotic communities and their relationships; provides management considerations in terms including environmental concerns; and identifies research and management information gaps. Portions of the bay are managed as a national wildlife refuge. Management issues for this ecosystem include loss of habitat and degradation of the environment by additional industrial development and nonpoint source pollution. -from Authors

California

Wildlife importation into the United States, 1900-1972

Data from Bureau of Biological Survey and U.S. Fish and Wildlife Service reports show an overall increase in the number of birds and mammals imported from 1900 to 1972. The trend was interrupted by World War I, the economic depression of the 1930's, and World War II. Data are lacking for the years after World War II until 1968. Until 1942, domesticated canaries and a few species of game birds made up most of the avian imports; the shell parakeet or budgerigar was the most commonly imported parrot. Although the total number ofbirds imported 1968-72 was-not greatly different from the pre-depression years, the proportion of canaries, game species, and parakeets declined greatly and the variety and number of cage birds including other parrot species greatly increased. Until 1930 most mammals imported were for laboratory use or fur farming. After 1930 the number of imported mammals increased with the growing importance of primates, especially rhesus macaques, in research. Since 1968 the number of mammals irnported annually has been at least 5 times greater than the previous peak of 1938, and primates have made up 87% of mammalian imports. Information on reptiles and amphibians imported into the United States is available only for 1970 and 1971. Turtles were the most commonly imported reptiles, frogs and toads the most commonly imported amphibians.

Special Scientific Report - Wildlife

Coal: special report number 2

The Fish and Wildlife Service has extensive biological expertise within the Department of Interior and exerts national leadership in the management and protection of the nation's fish and wildlife resources, their habitat, and environment. Specifically, the Office of Biological Services obtains and assimilates biological and environmental data and identifies additional informational needs and means to provide environmental and biological input into major natural resource decisions. Coal Coordinators assist in carrying out Fish and Wildlife Service involvement in the Interior Department Coal Leasing Program through a multi-stage process designed to assemble existing fish and wildlife inventory data and to prioritize fish and wildlife values in areas subject to coal leasing and associated development. This report is designed to identify possible areas of concern for wildlife and its habitat in Wyoming in the development of coal and the associate implication of land use changes. This report summarizes past and present development of the coal resource in Wyoming in anticipation of future identification of data needs for making sound resource decisions in the development of coal.

FWS/OBS

Arctic Refuge coastal plain terrestrial wildlife research summaries

In 1980, when the U.S. Congress enacted the Alaska National Interest Lands Conservation Act (ANILCA), it also mandated a study of the coastal plain of the Arctic National Wildlife Refuge. Section 1002 of ANILCA stated that a comprehensive inventory of fish and wildlife resources would be conducted on 1.5 million acres of the Arctic Refuge coastal plain (1002 Area). Potential petroleum reserves in the 1002 Area were also to be evaluated from surface geological studies and seismic exploration surveys. Results of these studies and recommendations for future management of the Arctic Refuge coastal plain were to be prepared in a report to Congress. In 1987, the Department of the Interior published the Arctic National Wildlife Refuge, Alaska, Coastal Plain Resource Assessment - Report and Recommendations to the Congress of the United States and Final Environmental Impact Statement. This report to Congress identified the potential for oil and gas production (updated* most recently by the U.S. Geological Survey in 2001), described the biological resources, and evaluated the potential adverse effects to fish and wildlife resources. The 1987 report analyzed the potential environmental consequences of five management alternatives for the coastal plain, ranging from wilderness designation to opening the entire area to lease for oil and gas developement. The report's summary recommended opening the 1002 Area to an orderly oil and gas leasing program, but cautioned that adverse effects to some wildlife populations were possible. Congress did not act on this recommendation nor any other alternative for the 1002 Area, and scientists continued studies of key wildlife species and habitats on the coastal plain of the Arctic Refuge and surrounding areas. This report contains updated summaries of those scientific investigations of caribou, muskoxen, predators (grizzly bears, wolves, golden eagles), polar bears, snow geese, and their wildlife habitats. Contributions to this report were made by scientists affiliated with the U.S. Geological Survey; U.S. Fish and Wildlife Service; Alaska Department of Fish and Game; University of Alaska-Fairbanks; Canadian Wildlife Service; Yukon Department of Renewable Resources; and the Northwest Territories Department of Resources, Wildlife, and Economic Development. Sections of the report presenting new information on caribou and forage plants were peer-reviewed by three independent, non-affiliated scientists. The remaining sections summarize previously published peer-reviewed scientific papers and were reviewed by a single independent scientist. The U.S. Geological Survey and the U.S. Fish and Wildlife Service collaborated in the publication of this report.

Alaska, Northwest Territories, Yukon Territory

Acid rain publications by the U.S. Fish and Wildlife Service, 1979-1989

Pollution of aquatic and terrestrial ecosystems has been a concern to society since the burning of fossil fuels began in the industrial revolution. In the past decade or so, this concern has been heightened by evidence that chemical transformation in the atmosphere of combustion by-products and subsequent long-range transport can cause environmental damage in remote areas. The extent of this damage and the rates of ecological recovery were largely unknown. "Acid rain" became the environmental issue of the 1980's. To address the increasing concerns of the public, in 1980 the Federal government initiated a 10-year interagency research program to develop information that could be used by the President and the Congress in making decisions for emission controls. The U.S. Fish and Wildlife Service has been an active participant in acid precipitation research. The Service provided support to a number of scientific conferences and forums, including the Action Seminar on Acid Precipitation held in Toronto, Canada, in 1979, an international symposium on Acidic Precipitation and Fishery Impacts in Northeastern North America in 1981, and a symposium on Acidic Precipitation and Atmospheric Deposition: A Western Perspective in 1982. These meetings as well as the growing involvement with the government's National Acidic Precipitation Assessment Program placed the Service in the lead in research on the biological effects of acidic deposition. Research projects have encompassed water chemistry, aquatic invertebrates, amphibians, fish, and waterfowl. Water quality surveys have been conducted to help determine the extent of acid precipitation effects in the northeast, Middle Atlantic, and Rocky Mountain regions. In addition to lake and stream studies, research in wetland and some terrestrial habitats has also been conducted. Specific projects have addressed important sport species such as brook trout (Salvelinus fontinalis), Atlantic salmon (Salmo salar), and striped bass (Morone saxatilis). Trace metal accumulation in fish has been investigated and a symposium sponsored on related work. U.S> Fish and Wildlife Service scientists serve as advisors and participants in research being conducted by industry, nonprofit groups, State and other Federal agencies. Researcher have worked closely with colleagues in Canada, England, Norway, Scotland, the Soviet Union, and Sweden to gain additional understanding of the problem. In 1982, the Service implemented a mitigation research program to provide resource managers with information to help them protect sensitive ecosystems, and rehabilitation methods for resources already affected by acidification. An international workshop was convened to outline the research needs. Several conferences were organized to develop appropriate field and laboratory procedures. Scientists with the mitigation research program are evaluating the ecological effects of liming (addition of base material) surface waters and surrounding watershed to provide buffering against acidic inputs. Through long-term cooperative project with States and other organizations, investigations are studying possible abatement methods for regions most affected by acidic deposition. To date, more than 200 reports the describe these studies have been published. These products include conference proceedings, journal articles, and in-house scientific publications. An education poster describing the effects of acid rain on aquatic ecosystems was developed and distributed to individuals, conservations and State organizations, and the public education system. This annotated bibliography lists current publications by Service authors, cooperators, or contractors on acid rain and related quality. Entire are arranged alphabetically by author surname. For further information about the research program, contact the U.S. Fish and Wildlife Service, Acid Precipitation Section, National Fishery Research Center -- Leetown, Box 700, Kearneysville, WV 25430.

Biological Report

Model description and evaluation of the mark-recapture survival model used to parameterize the 2012 status and threats analysis for the Florida manatee ( Trichechus manatus latirostris )

This report provides supporting details and evidence for the rationale, validity and efficacy of a new mark-recapture model, the Barker Robust Design, to estimate regional manatee survival rates used to parameterize several components of the 2012 version of the Manatee Core Biological Model (CBM) and Threats Analysis (TA). The CBM and TA provide scientific analyses on population viability of the Florida manatee subspecies ( Trichechus manatus latirostris ) for U.S. Fish and Wildlife Service’s 5-year reviews of the status of the species as listed under the Endangered Species Act. The model evaluation is presented in a standardized reporting framework, modified from the TRACE (TRAnsparent and Comprehensive model Evaluation) protocol first introduced for environmental threat analyses. We identify this new protocol as TRACE-MANATEE SURVIVAL and this model evaluation specifically as TRACE-MANATEE SURVIVAL, Barker RD version 1. The longer-term objectives of the manatee standard reporting format are to (1) communicate to resource managers consistent evaluation information over sequential modeling efforts; (2) build understanding and expertise on the structure and function of the models; (3) document changes in model structures and applications in response to evolving management objectives, new biological and ecological knowledge, and new statistical advances; and (4) provide greater transparency for management and research review.

Open-File Report

Distribution, migration behavior, habitat use, and species interactions of fall-released juvenile hatchery spring Chinook salmon on the Deschutes River, Oregon, 2002, Annual report 2002

In a review of National Fish Hatcheries (NFH), the U.S. Fish and Wildlife Service (USFWS) identified the need to assess the fate of hatchery-reared fish and their potential effect on the aquatic community (USFWS 1998). Additionally, in the Columbia River Biological Opinion, the National Marine Fisheries Service (NMFS) recommended monitoring and evaluating ecological interactions between hatchery and wild fish (NMFS 1999). In 2002, a study was designed to investigate the fate of hatchery-reared fish and to assess habitat use and fish interactions in the Deschutes River, Oregon.

Oregon

Tactical approach for determining impact of energy development on wildlife in Wyoming: special report number 1

The U.S. Fish and Wildlife Service, within the Department of Interior, is responsible for providing national leadership in the management and protection of the nation's fish and wildlife resources, their habitat, and environment. Specifically, the Office of Biological Services obtains and assimilates biological and environmental data and identifies additional informational needs and means necessary to provide biological input into major natural resource decisions. The Wyoming Coal Coordinator for the U.S Fish and Wildlife Service is assigned the duty of becoming attuned to the ramifications of energy development within the State and its potential impact upon wildlife. In order for the Coal Coordinator to fulfill his obligations in becoming an "energy expert" for the Fish and Wildlife Service in Wyoming, it will be necessary for him to develop a means of obtaining an overview of the energy development situation. Similarly, in order for him to identify those area of critical concern to wildlife resources, it will be necessary that he determine or predict where energy development will occur, the nature of this development, and the cumulative effects of energy development upon wildlife. Likewise, in order to identify where wildlife data gaps occur and to determine future wildlife information needs, it will be necessary for him to compile and synthesize relevant existing data resources. It therefore becomes apparent that a need exists for him to gather and interpret pertinent information in a systematic way to meet these ends. The following is an account of the tactical number in which the Wyoming Coal Coordinator intends to approach the duties outlined above the rationale to be followed in meeting these needs. First, a general discussion on assessing impacts on wildlife is provided to form a basis for obtaining an overview. Secondly, a series of reports which will be generated to summarize existing information and to help identify potential problem areas is outlined. These reports will be further utilized to determine wildlife data gaps and future information needs related to wildlife and future energy development.

Wyoming

Biology: Integrating core to essential variables (Bio-ICE) task team report for marine mammals

Marine mammals are wide-ranging, relatively long-lived organisms that play a crucial role in maintaining healthy ocean ecosystems. Often referred to as ecosystem engineers and sentinel species in marine ecosystems, these charismatic megafauna feed at a variety of trophic levels, affecting food web dynamics and cycling of chemicals and nutrients in the water column as well as in benthic habitats, both nearshore and in the deep ocean. An understanding of their abundance and distribution is an essential starting point for evaluating their role in ocean ecosystems. Accordingly, marine mammals have been included among key variables to monitor in ocean observing systems, from core variables for the U.S. Integrated Ocean Observing System (IOOS) to an Essential Ocean Variable (EOV) for the Global Ocean Observing System (GOOS). They also contribute to several Essential Biodiversity Variables (EBVs) for the Group on Earth Observations Biodiversity Observation Network (GEO BON). Further, evaluation of the health of marine mammal populations will help deliver societal benefits by contributing to the UN Decade of Ocean Science for Sustainable Development; informing reporting activities such as the World Ocean Assessment; and supporting achievement of Sustainable Development Goal 14, the post-2020 framework for the Convention for Biological Diversity, and a new treaty for conservation and sustainable use of marine biodiversity beyond national jurisdiction. In the U.S., the National Marine Fisheries Service (NMFS) and the U.S. Fish and Wildlife Service (FWS) are required to produce stock assessments for marine mammals under the Marine Mammal Protection Act (MMPA, 16 U.S.C. §1371 et seq.). Stock assessment analyses require accurate, up to-date information on abundance and distribution to inform appropriate management and/or conservation measures. Despite the availability of information on abundance and distribution within the stock assessment reports, availability and accessibility of the underlying data to the broader ocean observing community and contribution to EOVs remain inconsistent.

Report