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Assessing exotic plant species invasions and associated soil characteristics: A case study in eastern Rocky Mountain National Park, Colorado, USA, using the pixel nested plot design

Rocky Mountain National Park (RMNP), Colorado, USA, contains a diversity of plant species. However, many exotic plant species have become established, potentially impacting the structure and function of native plant communities. Our goal was to quantify patterns of exotic plant species in relation to native plant species, soil characteristics, and other abiotic factors that may indicate or predict their establishment and success. Our research approach for field data collection was based on a field plot design called the pixel nested plot. The pixel nested plot provides a link to multi-phase and multi-scale spatial modeling-mapping techniques that can be used to estimate total species richness and patterns of plant diversity at finer landscape scales. Within the eastern region of RMNP, in an area of approximately 35,000 ha, we established a total of 60 pixel nested plots in 9 vegetation types. We used canonical correspondence analysis (CCA) and multiple linear regressions to quantify relationships between soil characteristics and native and exotic plant species richness and cover. We also used linear correlation, spatial autocorrelation and cross correlation statistics to test for the spatial patterns of variables of interest. CCA showed that exotic species were significantly (P < 0.05) associated with photosynthetically active radiation (r = 0.55), soil nitrogen (r = 0.58) and bare ground (r = -0.66). Pearson's correlation statistic showed significant linear relationships between exotic species, organic carbon, soil nitrogen, and bare ground. While spatial autocorrelations indicated that our 60 pixel nested plots were spatially independent, the cross correlation statistics indicated that exotic plant species were spatially associated with bare ground, in general, exotic plant species were most abundant in areas of high native species richness. This indicates that resource managers should focus on the protection of relatively rare native rich sites with little canopy cover, and fertile soils. Using the pixel nested plot approach for data collection can facilitate the ecological monitoring of these vulnerable areas at the landscape scale in a time- and cost-effective manner. ?? 2006 Elsevier B.V. All rights reserved.

Applied Soil Ecology

Soil nematode communities are ecologically more mature beneath late- than early-successional stage biological soil crusts

Biological soil crusts are key mediators of carbon and nitrogen inputs for arid land soils and often represent a dominant portion of the soil surface cover in arid lands. Free-living soil nematode communities reflect their environment and have been used as biological indicators of soil condition. In this study, we test the hypothesis that nematode communities are successionally more mature beneath well-developed, late-successional stage crusts than immature, early-successional stage crusts. We identified and enumerated nematodes by genus from beneath early- and late-stage crusts from both the Colorado Plateau, Utah (cool, winter rain desert) and Chihuahuan Desert, New Mexico (hot, summer rain desert) at 0-10 and 10-30 cm depths. As hypothesized, nematode abundance, richness, diversity, and successional maturity were greater beneath well-developed crusts than immature crusts. The mechanism of this aboveground-belowground link between biological soil crusts and nematode community composition is likely the increased food, habitat, nutrient inputs, moisture retention, and/or environmental stability provided by late-successional crusts. Canonical correspondence analysis of nematode genera demonstrated that nematode community composition differed greatly between geographic locations that contrast in temperature, precipitation, and soil texture. We found unique assemblages of genera among combinations of location and crust type that reveal a gap in scientific knowledge regarding empirically derived characterization of dominant nematode genera in deserts soils and their functional role in a crust-associated food web. ?? 2006 Elsevier B.V. All rights reserved.

Applied Soil Ecology

Wildfire-resistant biological soil crusts and fire-induced loss of soil stability in Palouse prairies, USA

Frequent low-intensity fires are a natural component of the ecology of the Palouse prairies of northwestern North America. To study the effects of fire upon biological soil crusts (BSCs) occurring in these grasslands, we sampled three burned (in 2000) sites and three unburned sites in the Hell's Canyon area (OR, USA) ???1 year post-fire. We measured vascular plant and BSC cover, soil microbe pigmentation, texture and chemistry, and soil surface physical properties (stability and rugosity). Festuca idahoensis was two times more abundant in unburned plots (P=0.0006), and vascular plant and litter cover were generally higher in unburned plots. At the community scale, there was no difference in the lichen and moss species composition, suggesting much less drastic effects of fire on BSCs than reported in other systems. Soil surface stability (measured using slake value) was significantly lower in burned sites than unburned sites (median value=5 versus 6, P=0.008), a result which is likely due to the greater density of lichens and mosses encountered in the unburned plots. Soil microbe pigmentation was lower in burned plots (P=0.03), suggesting that the biomass of photosynthetic microbes had decreased; however, the presence of intra- and extracellular pigments in burned soils indicates that microorganisms were not eradicated. Pigments most strongly associated with cyanobacteria were more abundant in unburned sites, suggesting that cyanobacteria may have been more strongly impacted by the fire than other BSC components. Composition of nutrients and surface rugosity did not differ significantly between treatments. We hypothesize that Palouse prairie soil crusts are relatively resistant to wildfire because of low fire intensity and their occupation of space away from the vascular plant fuel load.

Applied Soil Ecology

Fire frequency impacts soil properties and processes in sagebrush steppe ecosystems of the Columbia Basin

Increased fire frequency in semi-arid ecosystems can alter biochemical soil properties and soil processes that underpin ecosystem structure and functioning, thus threatening native plant communities and the species that rely on them. However, there is much uncertainty about the magnitude of change as soils are exposed to more fires, because soil recovery and changes in fire severity following a first fire mediate the impact of successive fires on soil properties. With this study we aim to evaluate how increased fire frequency affects soil biochemical properties (i.e. soil pH, soil organic matter (SOM), soil organic carbon (SOC), soil structure and mineral N) and processes (i.e. microbial and enzymatic activity) in a sagebrush-steppe ecosystem located in the Columbia Plateau Ecoregion, Washington, USA. During 2016, we collected soils from once (2012), twice (2003 and 2012), and thrice (2003, 2007, and 2012) burned areas, enabling us to test the hypothesis that increasing fire frequency will exacerbate the impact of fire on soil properties and processes. Our study yielded three main results: (1) fire reduced the total soil C concentration and soil C in aggregates relative to unburned soil, but only when soil was exposed to fire once (i.e. the most recent fire), (2) compared to the unburned soils, SOM contents, enzyme activity and microbial CO 2 respiration were suppressed in the once and thrice burned soils, but not in the twice burned soils, and (3) fire increased NO 3 − -N contents across the once and twice burned sites, and reduced enzyme activity associated with N cycling in the thrice burned sites. Taken together, our findings suggest that a one-time fire in this shrub dominated semi-arid ecosystem significantly changes soil biochemical attributes and microbially driven processes. With sufficient time between fires, these structural and functional properties can partially recover, and this may persist even after a second fire, but recovery is limited when a third fire creates an additional disturbance at a shorter time interval. Furthermore, while soil C pools and microbial decomposition processes were able to recover with sufficient time, greater soil resource availability prevailed in soil across all fire frequencies, indicating that fire is likely to promote invasion and reduce ecosystem stability, even when other soil properties recover.

Washington

Developing biocrust field cultivation techniques for soil restoration: An assessment of bacterial communities

Biological soil crusts (biocrusts) are a coherent, thin soil surface layer, engineered and inhabited by a diverse community of moss, lichen, cyanobacteria, and other microorganisms. Biocrusts provide critical functions in dryland systems and may be lost from the ecosystem through physical disturbance or other global change drivers. Once biocrusts are lost, natural recovery can occur very slowly. This has led to the development of biocrust rehabilitation strategies, including cultivation of biocrust propagules to inoculate degraded sites. As the need for biocrust restoration grows in scale and across different regions, inoculum cultivation and application methods are being asked to keep up. In this work, we evaluate cyanobacterial community composition and abundance in greenhouse and field cultivation systems, with and without growth substrate and shade treatments. We also consider cultivation of locally and non-locally sourced biocrust inocula at a single cultivation facility on the Colorado Plateau. We found that field cultivation is a viable option for biocrust cultivation. For almost all cyanobacteria, habitat amelioration was necessary for growth in the field. Despite differences in inocula composition following cultivation, restoration outcomes five months after inoculation were poor with no significant increases in cyanobacterial abundance, soil chlorophyll a , or soil exopolysaccharide content. Thus, more work is needed to boost the initial growth and survival of biocrust inocula, regardless of the method of cultivation (i.e., greenhouse or field). Future work focused on assessing opportunities for habitat amelioration during application to improve biocrust establishment during this critical restoration phase would be highly valuable.

Utah

Studies to assess natural resource recovery and evaluate monitoring methods for restored bottomland hardwood forests

The Natural Resource Damage Assessment and Restoration process assesses natural resource injury due to oil or chemical spills and calculates the damages to compensate the public for those injuries. Ecological restoration provides a means for recovering resources injured or lost due to contamination from oil or chemical spills by restoring the injured site after remediation, or acquiring or reconstructing equivalent resources off site to replace those lost due to the spill. In the case of restored forests, once restoration is implemented, monitoring of forest ecology helps keep recovery on track, with the maturation of forest vegetation, recovered soil conditions, and development of microbial, fungal, and faunal communities, necessary for ecologically functioning forests. This series of papers focuses on applying methods for monitoring restoration progress in forest vegetation and soils, and amphibian, avian, and mammalian communities, assessing strengths and weaknesses of different methods, and evaluating levels of effort needed to obtain accurate indications of forest ecological condition.

Integrated Environmental Assessment and Management

New and interesting species of the genus Muelleria (Bacillariophyta) from the Antarctic region and South Africa

During a survey of the terrestrial diatom flora of some sub-Antarctic islands in the southern Indian and Atlantic Oceans and of the Antarctic continent, more than 15 taxa belonging to the genus Muelleria were observed. Nine of these taxa are described as new species using light and scanning electron microscopy. Comments are made on their systematic position and how they are distinguished from other species in the genus. Additionally, two previously unrecognized taxa within the genus were discovered in samples from South Africa. One of these, Muelleria taylorii Van de Vijver & Cocquyt sp. nov., is new to science; the other, Muelleria vandermerwei (Cholnoky) Van de Vijver & Cocquyt nov. comb., had been included in the genus Diploneis. The large number of new Muelleria taxa on the (sub)-Antarctic locations is not surprising. Species in Muelleria occur rarely in collections; in many habitats, it is unusual to find more than 1-2 valves in any slide preparation. As a result, records are scarce. The practice of "force-fitting" (shoehorning) specimens into descriptions from common taxonomic keys (and species drift) results in European species, such as M. gibbula and M. linearis, being applied to Antarctic forms in ecological studies. Finally, the typical terrestrial habitats of soils, mosses and ephemeral water bodies of most of these taxa have been poorly studied in the past.

Phycologia

A combined microbial and ecosystem metric of carbon retention efficiency explains land cover-dependent soil microbial biodiversity–ecosystem function relationships

While soil organic carbon (C) is the foundation of productive and healthy ecosystems, the impact of the ecology of microorganisms on C-cycling remains unknown. We manipulated the diversity, applied here as species richness, of the microbial community present in similar soils on two contrasting land-covers—an adjacent pasture and forest—and observed the transformations of plant detritus and soil organic matter (SOM) using stable isotope ( 13 C) tracing coupled with a novel nuclear magnetic resonance (NMR) experiment. The amount of detritus-C degraded was not affected by the microbial diversity (p > 0.05), however the fate of detritus- and SOM-C across the diversity gradient was complex and land cover-dependent. For example, in the pasture soil, higher diversity led to lower CO 2 production (p = 0.001), a trend driven solely by SOM-C mineralization. There was no relationship between diversity and detritus-C mineralization or production of new mineral-associations after one year (p > 0.05). In contrast, in the forest soil higher diversity resulted in increased detritus-C (p = 0.01) and SOM-C (p = 0.0008) mineralization and decreased mineral-associated organic matter formation (p = 0.02). In both land cover types, retention efficiency—a measure that integrates both microbial physiology and the ability of the ecosystem to retain C—explained C loss and transformation trends. Overall, this demonstrates that the trajectory of C gained and lost is altered by land management-induced changes to microbial communities, soil structure, and chemical characteristics underlying SOM persistence.

Biogeochemistry Letters

Sustaining visitor use in protected areas: Future opportunities in recreation ecology research based on the USA experience

Recreation ecology, the study of environmental consequences of outdoor recreation activities and their effective management, is a relatively new field of scientific study having emerged over the last 50 years. During this time, numerous studies have improved our understanding of how use-related, environmental and managerial factors affect ecological conditions and processes. Most studies have focused on vegetation and soil responses to recreation-related trampling on trails and recreation sites using indicators such as percent vegetation cover and exposed mineral soil. This applied approach has and will continue to yield important information for land managers. However, for the field to advance, more attention needs to be given to other ecosystem attributes and to the larger aspects of environmental conservation occurring at landscape scales. This article is an effort at initiating a dialog on needed advances in the field. We begin by reviewing broadly generalizable knowledge of recreation ecology, to separate what is known from research gaps. Then, based on the authors’ perspective of research in the USA and North America, several research directions are suggested as essential for continued progress in this field including theoretical development, broadening scale, integration with other disciplines, and examination of synergistic effects.

Environmental Management

Framework for using downscaled climate model projections in ecological experiments to quantify plant and soil responses

Soil and plant responses to climate change can be quantified in controlled settings. However, the complexity of climate projections often leads researchers to evaluate ecosystem response based on general trends, rather than specific climate model outputs. Climate projections capture spatial and temporal climate extremes and variability that are lost when using mean climate trends. In addition, application of climate projections in experimental settings remains limited. Our objective was to develop a framework to incorporate statistically downscaled climate model projections into the design of temperature and precipitation treatments for ecological experiments. To demonstrate the utility of experimental treatments derived from climate projections, we used wetlands in the Great Plains as a model ecosystem for evaluating plant and soil responses. Spatial and temporal projections were selected to capture variability and intensity of projected future conditions for exemplary purposes. To illustrate climate projection application for ecological experiments, we developed temperature and precipitation treatments based on moderate-emissions scenario climate outputs (i.e., RCP4.5–650 ppm CO 2 equivalent). Our temperature treatments captured weekly trends that represented cool, average, and warm temperature predictions, and our daily precipitation treatments mimicked various seasonal precipitation trends and extreme events projected for the late 21st century. Treatments were applied to two short-term controlled experiments evaluating (1) plant germination (temperature treatment applied in growth chamber) and (2) soil nitrogen cycling (precipitation treatment applied in greenhouse) responses to projected future conditions in the Great Plains. Our approach provides flexibility for selecting appropriate and precise climate model outputs to design experimental treatments. Using these techniques, ecologists can better incorporate variation in climate model projections for experimentally evaluating ecosystem responses to future climate conditions, reduce uncertainty in predictive ecological models, and apply predicted outcomes when making management and policy decisions.

Nebraska, Texas

Phenology-based, remote sensing of post-burn disturbance windows in rangelands

Wildland fire activity has increased in many parts of the world in recent decades. Ecological disturbance by fire can accelerate ecosystem degradation processes such as erosion due to combustion of vegetation that otherwise provides protective cover to the soil surface. This study employed a novel ecological indicator based on remote sensing of vegetation greenness dynamics (phenology) to estimate variability in the window of time between fire and the reemergence of green vegetation. The indicator was applied as a proxy for short-term, post-fire disturbance windows in rangelands; where a disturbance window is defined as the time required for an ecological or geomorphic process that is altered to return to pre-disturbance levels. We examined variability in the indicator determined for time series of MODIS and AVHRR NDVI remote sensing data for a database of ∼100 historical wildland fires, with associated post-fire reseeding treatments, that burned 1990–2003 in cold desert shrub steppe of the Great Basin and Columbia Plateau of the western USA. The indicator-based estimates of disturbance window length were examined relative to the day of the year that fires burned and seeding treatments to consider effects of contemporary variability in fire regime and management activities in this environment. A key finding was that contemporary changes of increased length of the annual fire season could have indirect effects on ecosystem degradation, as early season fires appeared to result in longer time that soils remained relatively bare of the protective cover of vegetation after fires. Also important was that reemergence of vegetation did not occur more quickly after fire in sites treated with post-fire seeding, which is a strategy commonly employed to accelerate post-fire vegetation recovery and stabilize soil. Future work with the indicator could examine other ecological factors that are dynamic in space and time following disturbance – such as nutrient cycling, carbon storage, microbial community composition, or soil hydrology – as a function of disturbance windows, possibly using simulation modeling and historical wildfire information.

California;Idaho;Nevada;Oregon;Utah;Washington

A new approach for predicting drought-related vegetation stress: Integrating satellite, climate, and biophysical data over the U.S. central plains

Droughts are normal climate episodes, yet they are among the most expensive natural disasters in the world. Knowledge about the timing, severity, and pattern of droughts on the landscape can be incorporated into effective planning and decision-making. In this study, we present a data mining approach to modeling vegetation stress due to drought and mapping its spatial extent during the growing season. Rule-based regression tree models were generated that identify relationships between satellite-derived vegetation conditions, climatic drought indices, and biophysical data, including land-cover type, available soil water capacity, percent of irrigated farm land, and ecological type. The data mining method builds numerical rule-based models that find relationships among the input variables. Because the models can be applied iteratively with input data from previous time periods, the method enables to provide predictions of vegetation conditions farther into the growing season based on earlier conditions. Visualizing the model outputs as mapped information (called VegPredict) provides a means to evaluate the model. We present prototype maps for the 2002 drought year for Nebraska and South Dakota and discuss potential uses for these maps.

ISPRS Journal of Photogrammetry and Remote Sensing

Ecological effects on streams from forest fertilization: Literature review and conceptual framework for future study in the western Cascades

Fertilization of forests with urea-nitrogen has been studied numerous times for its effects on water quality. Stream nitrogen concentrations following fertilization are typically elevated during winter, including peaks in the tens-of-thousands of parts per billion range, with summer concentrations often returning to background or near-background levels. Despite these increases, water-quality criteria for nitrogen have rarely been exceeded. However, such criteria are targeted at fish toxicity or human health and are not relevant to concentrations that could cause ecological disturbances. Studies of the responses of stream biota to fertilization have been rare and have targeted either immediate, toxicity-based responses or used methods insensitive to ongoing ecological processes. This report reviews water-quality studies following forest fertilizations, emphasizing Cascade streams in the Pacific Northwest and documented biological responses in those streams. A conceptual model predicting potential ecological response to fertilization, which includes effects on algal growth and primary production, is presented. In this model, applied fertilizer nitrogen reaching streams is mostly exported during winter. However, some nitrogen retained in soils or stream and riparian areas may become available to aquatic biota during spring and summer. Biological responses may be minimal in small streams nearest to application because of light limitation, but may be elevated downstream where light is sufficient to allow algal growth. Ultimately, algal response could be greatest in downstream reaches, although ambient nutrient concentrations remain low due to uptake and benthic nutrient recycling. Ground-water flow paths and hyporheic processing could be critical in determining the fate of applied nitrogen. A framework is provided for testing this response in the Little River watershed, a tributary to the North Umpqua River, Oregon, at basic and intensive levels of investigation.

Oregon

Quantifying regional ecological dynamics using agency monitoring data, ecological site descriptions, and ecological site groups

Information about what ecological conditions are likely, causes or drivers of degradation, and potential management actions to restore degraded lands may support land conservation and restoration decisions. State-and-transition models (STMs) describe persistent plant and ecological conditions that are possible (the “state”) within a given abiotic setting and drivers or actions that can cause shifts between states (the “transitions”). These primarily conceptual models are widely used to inform resource and conservation decisions. Data-driven STMs have been developed for some lands, but not at regional or national scales. Here, we demonstrate a new repeatable workflow for developing data-driven STMs in the United States (US). The approach leverages predictive maps of Ecological Site Groups (ESGs), extensive field-based Federal monitoring databases, information from Ecological Site Description (ESD) STMs, soil erosion models, remotely sensed productivity, and other available spatial information (fire, land protection, and drought) to provide context and descriptions of the data-driven states, including likely drivers of transitions. Results of this workflow applied to one dryland ESG in the Upper Colorado River Basin in the southwestern US suggest that an Invaded state (16% of 1352 plots) and some occurrences of a Grassland state (30% of plots) are in a degraded or at-risk condition with reduced ecosystem services. The most common drivers of state transitions in the associated ESDs ( n = 26) are related to livestock grazing and fire. The Invaded state in the ESG has evidence of degraded habitat quality and accelerated run-off while the Grassland state occurrences show reduced richness, productivity, and elevated erosion risk by wind. Areas subject to wildfire and with lower protection status had greater probability of Invaded state occurrence, generally supporting drivers in ESDs. The workflow presented here can serve as a template for describing ecological dynamics at regional scales, and support prioritization of land for conservation and climate adaptation activities.

Rangeland Ecology & Management

Correlates of biological soil crust abundance across a continuum of spatial scales: Support for a hierarchical conceptual model

1. Desertification negatively impacts a large proportion of the global human population and > 30% of the terrestrial land surface. Better methods are needed to detect areas that are at risk of desertification and to ameliorate desertified areas. Biological soil crusts are an important soil lichen-moss-microbial community that can be used toward these goals, as (i) bioindicators of desertification damage and (ii) promoters of soil stability and fertility. 2. We identified environmental factors that correlate with soil crust occurrence on the landscape and might be manipulated to assist recovery of soil crusts in degraded areas. We conducted three studies on the Colorado Plateau, USA, to investigate the hypotheses that soil fertility [particularly phosphorus (P), manganese (Mn) and zinc (Zn)] and/or moisture limit soil crust lichens and mosses at four spatial scales. 3. In support of the soil fertility hypothesis, we found that lichen-moss crusts were positively correlated with several nutrients [Mn, Zn, potassium (K) and magnesium (Mg) were most consistent] at three of four spatial scales ranging from 3.5 cm2 in area to c. 800 km2. In contrast, P was negatively correlated with lichen-moss crusts at three scales. 4. Community composition varied with micro-aspect on ridges in the soil crust. Three micro-aspects [north-north-west (NNW), east-north-east (ENE) and TOP] supported greater lichen and moss cover than the warmer, windward and more xeric micro-aspects [west-south-west (WSW) and south-south-east (SSE)]. This pattern was poorly related to soil fertility; rather, it was consistent with the moisture limitation hypothesis. 5. Synthesis and application. Use of crusts as desertification bioindicators requires knowledge of a site's potential for crust cover in the absence of desertification. We present a multi-scale model of crust potential as a function of site properties. Future quantitative studies can use this model to guide sampling efforts. Also, our results suggest new directions in restoration research: enhancement of moisture residence time and fertilization with key nutrients (Mn, Zn, K and Mg). Re-establishment of soil crusts in desertified lands will help regain lost soil stability and fertility, and facilitate plant re-establishment. ?? 2006 British Ecological Society.

Journal of Applied Ecology

Narrowing historical uncertainty: probabilistic classification of ambiguously identified tree species in historical forest survey data

Historical data have increasingly become appreciated for insight into the past conditions of ecosystems. Uses of such data include assessing the extent of ecosystem change; deriving ecological baselines for management, restoration, and modeling; and assessing the importance of past conditions on the composition and function of current systems. One historical data set of this type is the Public Land Survey (PLS) of the United States General Land Office, which contains data on multiple tree species, sizes, and distances recorded at each survey point, located at half-mile (0.8 km) intervals on a 1-mi (1.6 km) grid. This survey method was begun in the 1790s on US federal lands extending westward from Ohio. Thus, the data have the potential of providing a view of much of the US landscape from the mid-1800s, and they have been used extensively for this purpose. However, historical data sources, such as those describing the species composition of forests, can often be limited in the detail recorded and the reliability of the data, since the information was often not originally recorded for ecological purposes. Forest trees are sometimes recorded ambiguously, using generic or obscure common names. For the PLS data of northern Wisconsin, USA, we developed a method to classify ambiguously identified tree species using logistic regression analysis, using data on trees that were clearly identified to species and a set of independent predictor variables to build the models. The models were first created on partial data sets for each species and then tested for fit against the remaining data. Validations were conducted using repeated, random subsets of the data. Model prediction accuracy ranged from 81% to 96% in differentiating congeneric species among oak, pine, ash, maple, birch, and elm. Major predictor variables were tree size, associated species, landscape classes indicative of soil type, and spatial location within the study region. Results help to clarify ambiguities formerly present in maps of historic ecosystems for the region and can be applied to PLS datasets elsewhere, as well as other sources of ambiguous historical data. Mapping the newly classified data with ecological land units provides additional information on the distribution, abundance, and associations of tree species, as well as their relationships to environmental gradients before the industrial period, and clarifies the identities of species formerly mapped only to genus. We offer some caveats on the appropriate use of data derived in this way, as well as describing their potential.

Ecosystems

Capturing interactions between nitrogen and hydrological cycles under historical climate and land use: Susquehanna watershed analysis with the GFDL land model LM3-TAN

We developed a process model LM3-TAN to assess the combined effects of direct human influences and climate change on terrestrial and aquatic nitrogen (TAN) cycling. The model was developed by expanding NOAA's Geophysical Fluid Dynamics Laboratory land model LM3V-N of coupled terrestrial carbon and nitrogen (C-N) cycling and including new N cycling processes and inputs such as a soil denitrification, point N sources to streams (i.e., sewage), and stream transport and microbial processes. Because the model integrates ecological, hydrological, and biogeochemical processes, it captures key controls of the transport and fate of N in the vegetation–soil–river system in a comprehensive and consistent framework which is responsive to climatic variations and land-use changes. We applied the model at 1/8° resolution for a study of the Susquehanna River Basin. We simulated with LM3-TAN stream dissolved organic-N, ammonium-N, and nitrate-N loads throughout the river network, and we evaluated the modeled loads for 1986–2005 using data from 16 monitoring stations as well as a reported budget for the entire basin. By accounting for interannual hydrologic variability, the model was able to capture interannual variations of stream N loadings. While the model was calibrated with the stream N loads only at the last downstream Susquehanna River Basin Commission station Marietta (40°02' N, 76°32' W), it captured the N loads well at multiple locations within the basin with different climate regimes, land-use types, and associated N sources and transformations in the sub-basins. Furthermore, the calculated and previously reported N budgets agreed well at the level of the whole Susquehanna watershed. Here we illustrate how point and non-point N sources contributing to the various ecosystems are stored, lost, and exported via the river. Local analysis of six sub-basins showed combined effects of land use and climate on soil denitrification rates, with the highest rates in the Lower Susquehanna Sub-Basin (extensive agriculture; Atlantic coastal climate) and the lowest rates in the West Branch Susquehanna Sub-Basin (mostly forest; Great Lakes and Midwest climate). In the re-growing secondary forests, most of the N from non-point sources was stored in the vegetation and soil, but in the agricultural lands most N inputs were removed by soil denitrification, indicating that anthropogenic N applications could drive substantial increase of N 2 O emission, an intermediate of the denitrification process.

Pennsylvania

Chronic and episodic acidification of streams along the Appalachian Trail corridor, eastern United States

Acidic atmospheric deposition has adversely affected aquatic ecosystems globally. As emissions and deposition of sulfur (S) and nitrogen (N) have declined in recent decades across North America and Europe, ecosystem recovery is evident in many surface waters. However, persistent chronic and episodic acidification remain important concerns in vulnerable regions. We evaluated acidification in 269 headwater streams during 2010–2012 along the Appalachian Trail (AT) that transits several ecoregions and is located downwind of high levels of S and N emission sources. Discharge was estimated by matching sampled streams to those of a nearby gaged stream and assuming equivalent daily mean flow percentiles. Charge balance acid‐neutralizing capacity (ANC) values were adjusted to the 15th (Q15) and 85th flow percentiles (Q85) by applying the ANC/discharge slope among sample pairs collected at each stream. A site‐based approach was applied to streams sampled twice or more and a second regression‐based approach to streams sampled once to estimate episodic acidification magnitudes as the ANC difference from Q15 to Q85. Streams with ANC <0 μeq/L doubled from 16% to 32% as discharge increased from Q15 to Q85 according to the site‐based approach. The proportion of streams with ANC <0 μeq/L at low flow and high flow decreased from north to south. Base cation dilution explained the greatest amount of episodic acidification among streams and variation in sulfate (SO 4 2− ) concentrations was a secondary explanatory variable. Episodic SO 4 2− patterns varied geographically with dilution dominant in northern streams underlain by soils developed in glacial sediment and increased concentrations dominant in southern streams with older, highly weathered soils. Episodic acidification increased as low‐flow ANC increased, exceeding 90 μeq/L in 25% of streams. Episodic increases in ANC were the dominant pattern in streams with low‐flow ANC values <30 μeq/L. Chronic and episodic acidification remain an ecological concern among AT streams. The approach developed here could be applied to estimate the magnitude and extent of chronic and episodic acidification in other regions recovering from decreasing levels of atmospheric S and N deposition.

Connecticut, Georgia, Maine, Massachusetts, Maryla