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Impacts of white-tailed deer on red trillium ( Trillium recurvatum ): defining a threshold for deer browsing pressure at the Indiana Dunes National Lakeshore

Overabundant white-tailed deer ( Odocoileus virginianus ) have been a concern for land managers in eastern North America because of their impacts on native forest ecosystems. Managers have sought native plant species to serve as phytoindicators of deer impacts to supplement deer surveys. We analyzed experimental data about red trillium ( Trillium recurvatum ), large flowered trillium ( T. grandiflorum ), nodding trillium ( T. cernuum ), and declined trillium ( T. flexipes ) growth in paired exclosure (fenced) plots and control (unfenced) plots from 2002 to 2010 at the Indiana Dunes National Lakeshore. The latter two species lacked replication, so statistical analysis was not possible. All red trillium plants were surveyed for height-to-leaf, effects of browsing, and presence of flowers. Data from individuals in 2009 demonstrated a sigmoidal relationship between height-to-leaf and probability of flowering. The relationship on moraine soils was shifted to taller plants compared to those on sand substrates, with respectively 50 percent flowering at 18 and 16 cm and 33 percent flowering at 16 and 14 cm height-to-leaf. On a plot basis, the proportion of plants flowering was influenced by height to leaf, duration of protection, and deviation in rainfall. The proportion of plants flowering increased ninefold in exclosures (28 percent) compared to control plots (3 percent) over the 8 years of protection. The mean height-to-leaf was a function of the interaction between treatment and duration, as well as red trillium density. Changes in height-to-leaf in control plots from year to year were significantly influenced by an interaction between change in deer density and change in snowfall depth. There was a significant negative correlation between change in deer density and snowfall depth. Plants in the exclosures increased in height at a rate of 1.5 cm yr −1 whereas control plants decreased in height by 0.9 cm yr −1 . In all, 78 percent of the control plots lacked flowering individuals over the 9 years of study, indicating that red trillium is being negatively affected by deer throughout the East Unit of the park. Of the five deer management zones studied, only one showed pre-impact height-to-leaf and flowering percentages in control plots that then declined after 2005. The results of this study demonstrate that Trillium species growing in the lands of the Indiana Dunes National Lakeshore are being suppressed reproductively by deer browsing. Specifically, we demonstrate, for the first time, the utility of using red trillium ( Trillium recurvatum ) height-to-leaf and percentage of flowering as indicators of the impacts of deer browsing. Application of the recommended thresholds demonstrates their utility in adopting red trillium as a phytoindicator of deer impact. Responses of plants to protection from deer suggest that deer culling might be necessary for 6 or more years for red trillium populations and rare trillium species to recover.

Indiana↗

Vegetation response of a dry shrubland community to feral goat management on the island of Moloka‘i, Hawai‘i

The Hawaiian Islands are well known for their unique ecosystem assemblages that have a high proportion of endemic flora and fauna. However, since human colonization of this archipelago—starting with the arrival of Polynesian sailors approximately 1,200 years ago, and particularly following western contact in 1778—thousands of non-native species have been introduced to the Islands and many of these alien species have had severe impacts on the native ecosystems. Particularly damaging to these ecosystems are large mammals, including goats ( Capra hircus ), pigs ( Sus scrofa ), cattle ( Bos taurus ), deer ( Axis axis and Odocoileus hemionus ), and sheep ( Ovis spp.), which are collectively referred to here as ungulates; they cause extensive damage to the native vegetation by their browsing, grazing, and trampling. Similar impacts have been documented elsewhere, including New Zealand and many other island ecosystems. Previous studies in Hawai‘i have utilized fenced exclosures to assess the impacts of feral or wild ungulates on vegetation and the recovery potential for the native plant communities by comparing plant community composition, structure, and cover inside the fenced area (without ungulates) over time to the vegetation condition outside of the protection of the fence. In some cases, the native vegetation recovered once the animals were removed. However, in other situations alien plants were more competitive and dominated the revegetation process after the impacts of ungulates had been reduced or eliminated. This report describes the response of a highly degraded lowland dry habitat plant community located on the south slope of east Moloka‘i, Hawai ‘ i, to reduction of browsing and grazing impacts caused by feral goats. For this study, vegetation response inside a fenced exclosure was compared to vegetation change in the area outside of the fence that was still accessible to goats. This study is part of the larger U.S. Geological Survey Ridge-to-Reef (USGS-R2R) research project conducted between 2008 and 2014 to better understand the magnitude of, and factors responsible for, increased erosion on Moloka‘i. The upslope erosion has resulted in heavy sedimentation of the near-shore coral reef ecosystem on the leeward side of the island. The project area and adjacent lands are managed by the East Moloka‘i Watershed Partnership (EMoWP) to restore the vegetation and reduce erosion on the leeward side of the island. Specific questions addressed in this vegetation change study include: How does the vegetation composition, structure, and cover respond to different population levels of feral goats in this area? Are there plant species that can be used as indicators of different population levels of goats? Can native plants recover and become dominant again with the reduction or elimination of goats from this area? Are there invasive plant species that respond favorably to reduction of goat populations and could result in additional management threats to this area over time? How does the succession of vegetation following goat control relate to the original composition and structure of the plant communities that were formerly found in this area?

Hawai'i↗

Estimating pumping time and ground-water withdrawals using energy- consumption data

Evaluation of the hydrology of an aquifer requires knowledge about the volume of groundwater in storage and also about the volume of groundwater withdrawals. Totalizer flow meters may be installed at pumping plants to measure withdrawals; however, it generally is impractical to equip all pumping plants in an area with meters. A viable alternative is the use of rate-time methods. Rate-time methods may be used at individual pumping plants to decrease the data collection necessary for determining withdrawals. At sites where pumping-time measurement devices are not installed, pumping time may be determined on the basis of energy consumption and power demand. At pumping plants where energy consumption is metered, data acquired by reading of meters is used to estimate pumping time. Care needs to be taken to read these meters correctly. At pumping plants powered by electricity, the calculations need to be modified if transformers are present. At pumping plants powered by natural gas, the effects of the pressure-correction factor need to be included in the calculations. At pumping plants powered by gasoline, diesel oil, or liquid petroleum gas, the geometry of storage tanks needs to be analyzed as part of the calculations. The relation between power demand and pumping rate at a pumping plant can be described through the use of the power-consumption coefficient. Where equipment and hydrologic conditions are stable, this coefficient can be applied to total energy consumption at a site to estimate total groundwater withdrawals. Random sampling of power consumption coefficients can be used to estimate area-wide groundwater withdrawal. (USGS)

Water-Resources Investigations Report↗

Faunal responses to fire in chaparral and sage scrub in California, USA

Impact of fire on California shrublands has been well studied but nearly all of this work has focused on plant communities. Impact on and recovery of the chaparral fauna has received only scattered attention; this paper synthesizes what is known in this regard for the diversity of animal taxa associated with California shrublands and outlines the primary differences between plant and animal responses to fire. We evaluated the primary faunal modes of resisting fire effects in three categories: 1) endogenous survival in a diapause or diapause-like stage, 2) sheltering in place within unburned refugia, or 3) fleeing and recolonizing. Utilizing these patterns in chaparral and sagescrub, as well as some studies on animals in other mediterranean-climate ecosystems, we derived generalizations about how plants and animals differ in their responses to fire impacts and their post fire recovery. One consequence of these differences is that variation in fire behavior has a much greater potential to affect animals than plants. For example, plants recover from fire endogenously from soil-stored seeds and resprouts, so fire size plays a limited role in determining recovery patterns. However, animals that depend on recolonization of burned sites from metapopulations may be greatly affected by fire size. Animal recolonization may also be greatly affected by regional land use patterns that affect colonization corridors, whereas such regional factors play a minimal role in plant community recovery. Fire characteristics such as rate of spread and fire intensity do not appear to play an important role in determining patterns of chaparral and sage scrub plant recovery after fire. However, these fire behavior characteristics may have a profound role in determining survivorship of some animal populations as slow-moving, smoldering combustion may limit survivorship of animals in burrows, whereas fast-moving, high intensity fires may affect survivorship of animals in above ground refugia or those attempting to flee. Thus, fire regime characteristics may have a much greater effect on postfire recovery of animal communities than plant communities in these shrubland ecosystems.

Fire Ecology↗

Phytoremediation of trichloroethene (TCE) using cottonwood trees

Phytoremediation uses the natural ability of plants to degrade contaminants in ground water. A field demonstration designed to remediate aerobic shallow ground water that contains trichloroethene began in April 1996 with the planting of cottonwood trees over an approximately 0.2-hectare area at the Naval Air Station, Fort Worth, Tx. Ground water was sampled in July 1997, November 1997, February 1998, and June 1998. Analyses from samples indicate that tree roots have the potential to create anaerobic conditions in the ground water that will facilitate degradation of trichloroethene by microbially mediated reductive dichlorination. Dissolved oxygen concentrations, which varied across the site, were smallest near a mature cottonwood tree (about-20 years old) 60 meters southwest of the cottonwood plantings. Reduction of dissolved oxygen is the primary microbially mediated reaction occurring in the ground water beneath the planted trees, whereas near the mature cottonwood tree, data indicate that methanogenesis is the most probable reaction occurring. Reductive dichlorination either is not occurring or is not a primary process away from the mature tree. On the basis of isotopic analyses of carbon-13 at locations away from the mature tree, trichloroethene concentration is controlled by volatilization. Phytoremediation uses the natural ability of plants to degrade contaminants in ground water. A field demonstration designed to remediate aerobic shallow ground water that contains trichloroethene began in April 1996 with the planting of cottonwood trees over an approximately 0.2-hectare area at the Naval Air Station, Fort Worth, Tx. Ground water was sampled in July 1997, November 1997, February 1998, and June 1998. Analyses from samples indicate that tree roots have the potential to create anaerobic conditions in the ground water that will facilitate degradation of trichloroethene by microbially mediated reductive dichlorination. Dissolved oxygen concentrations, which varied across the site, were smallest near a mature cottonwood tree (about-20 years old) 60 meters southwest of the cottonwood plantings. Reduction of dissolved oxygen is the primary microbially mediated reaction occurring in the ground water beneath the planted trees, whereas near the mature cottonwood tree, data indicate that methanogenesis is the most probable reaction occurring. Reductive dichlorination either is not occurring or is not a primary process away from the mature tree. On the basis of isotopic analyses of carbon-13 at locations away from the mature tree, trichloroethene concentration is controlled by volatilization.

Conference Paper↗

Potential nitrogen critical loads for northern Great Plains grassland vegetation

The National Park Service is concerned that increasing atmospheric nitrogen deposition caused by fossil fuel combustion and agricultural activities could adversely affect the northern Great Plains (NGP) ecosystems in its trust. The critical load concept facilitates communication between scientists and policy makers or land managers by translating the complex effects of air pollution on ecosystems into concrete numbers that can be used to inform air quality targets. A critical load is the exposure level below which significant harmful effects on sensitive elements of the environment do not occur. A recent review of the literature suggested that the nitrogen critical load for Great Plains vegetation is 10-25 kg N/ha/yr. For comparison, current atmospheric nitrogen deposition in NGP National Park Service (NPS) units ranges from ~4 kg N/ha/yr in the west to ~13 kg N/ha/yr in the east. The suggested critical load, however, was derived from studies far outside of the NGP, and from experiments investigating nitrogen loads substantially higher than current atmospheric deposition in the region. Therefore, to better determine the nitrogen critical load for sensitive elements in NGP parks, we conducted a four-year field experiment in three northern Great Plains vegetation types at Badlands and Wind Cave National Parks. The vegetation types were chosen because of their importance in NGP parks, their expected sensitivity to nitrogen addition, and to span a range of natural fertility. In the experiment, we added nitrogen at rates ranging from below current atmospheric deposition (2.5 kg N/ha/yr) to far above those levels but commensurate with earlier experiments (100 kg N/ha/yr). We measured the response of a variety of vegetation and soil characteristics shown to be sensitive to nitrogen addition in other studies, including plant biomass production, plant tissue nitrogen concentration, plant species richness and composition, non-native species abundance, and soil inorganic nitrogen concentration. To determine critical loads for the NGP plant communities in our experiment, we followed the NPS’s precautionary principle in assuming that it is better to be cautious than to let harm occur to the environment. Thus, the critical loads we derived are the lowest nitrogen level that any of our data suggest has a measureable effect on any of the response variables measured. Badlands sparse vegetation, a low-productivity plant community that is an important part of the scenery at Badlands National Park and provides habitat for rare plant species, was the most sensitive of the three vegetation types. More aspects of this vegetation type responded to nitrogen addition, and at lower levels, than at the other two sites. Our data suggest that nitrogen deposition levels of 4- 6 kg N/ha/yr may increase biomass production, and consequently the amount of dead plant material on the ground in this plant community. Slightly higher critical loads are suggested for the two more productive vegetation types more characteristic of most NGP grasslands: 6-10 kg N/ha/yr for biomass production, grass tissue nitrogen concentration, or non-native species (especially annual brome grasses) cover. Highly variable results among years, as well as inconsistent responses to an increasing dose of nitrogen within sites, complicated the derivation of critical loads in this experiment, however. A less precautionary approach to deriving critical loads yielded higher values of 10-38 kg N/ha/yr.

Northern Great Plains↗

Herbicide treatment of invasive Vinca major growing with endangered Galium buxifolium, an island endemic

Galium buxifolium E. Greene [Rubiaceae] (sea-cliff bedstraw) is a small shrub restricted to San Miguel and Santa Cruz Islands, in the California Channel Islands. Almost all of the 26 known populations grow on vertical north-facing sea cliffs in native scrub, sandwiched between the sea below and non-native annual grasslands on the terraces above. A notable exception is a popula?tion at Pelican Bay on Santa Cruz Island, growing on the cliff and on thin terrace soils above the cliff in a stand of coastal bluff scrub that is recovering from more than a century of sheep grazing (Figure 1). Ironically, this stand is near the location of the historic Eaton Resort, a charismatic inn frequented by Hollywood glitterati in the early 1900s. Several landscape ornamentals planted there persist today in the area of the Galium population. Italian stone pine (Pinus pinaea) and eucalyptus (Eucalyptus spp.) tower over the site while the invasive groundcover Vinca major L. [Apocynaceae] (greater periwinkle) forms dense mats at the cliff edge that are spreading into the developing native plant stand. Wherever the Galium is found it is intermixed with other native scrub plants in dense communities on moist ocean bluffs. Historic notes and herbarium collections indicate that it may have been more widespread on nearshore terraces adjacent to sea-cliff populations before conversion to grassland. Since Pelican Bay is the only site that we know of where Galium is spreading onto the nearby terrace, we wanted to know whether the Vinca posed a roadblock to upslope population expansion. In 2005 we mapped Vinca and Galium at the site. We also measured Galium individuals to see where the smaller, younger plants were to better understand where the population is expanding. We observed that 1) both the Galium and the Vinca appear to be spreading from the cliff face upslope onto a series of rock outcrops, stone walls and benches, 2) the native scrub community is recovering at the site and 3) the Vinca appears to be moving into the native scrub where it overtops small plants, including those Galium in the smallest size classes. This observed pattern of Vinca displacement of native vegetation has been noted in other places, where it is treated as an invasive weed. We concluded that Vinca may pose a threat to the expansion of both the native scrub and the Galium population that it supports. Therefore, we worked with the US Fish and Wildlife Service and others to develop a research project investigating 1) best techniques for killing Vinca within the boundaries of an endangered plant population and 2) demographic response of Galium to the treatment. Our intent is to push Vinca back to the vertical cliff face to give the natives a chance to establish a vigorous stand. Our conservation goal is to encourage natural establishment of new Galium plants on the terrace along with expansion of the native coastal bluff scrub and Galium population. Our immediate treatment objective is to reduce live Vinca cover by 90 % on the accessible upslope portions of the habitat. Our recovery objective is no net loss of Galium plants 2006-2016.

California↗

Twenty-three years of vegetation change in a fly-ash leachate impacted meadow

1. Blag Slough, located in Indiana Dunes National Lakeshore, has received leachates from nearby fly-ash ponds for 13 years (1967-1980). We have monitored vegetation and sediment of Blag Slough since 1982, two years after the sealing of the fly-ash ponds and one year after the substrate was first exposed. The pH of the soil has increased one order of magnitude from 3.0 to 4.0 over the 23 years (1982-2005). If the pH further increases the solubility of many heavy metals will decrease, except for arsenic. We provide evidence that boron and zinc were bioaccumulating in the leaves of woody plants in 1984. The ratio of leaf concentration and soil concentration of aluminum suggests this element was not bioaccumulating in woody plants in 1984. 2. Soil concentrations of iron, aluminum, arsenic, and strontium were higher nearest the fly-ash ponds in 2005. The southwest corner of Blag Slough and middle position of transect X had the highest elevated levels of these metals and correlated with the occurrence of mixed spikerush association (dominated by Eleocharis olivacea). 3. Only a few exotic species occurred in the Blag Slough. Common reed (Phragmites australis) was among such species that occurred in three large clones. Other exotic species included dandelion (Taraxacum officinale), mullein (Verbascum thapsis), Jerusalem oak goosefoot (Chenopodium botrys), and sheep sorrel (Rumex acetosella). Ruderal species have occurred including thistle (Cirsium spp.), fire weed (Erechtites hieracifolium), and horseweed (Conyza canadensis). While occasional cattail (Typha) have been sampled and mapped in Blag Slough they have never persisted for very long. 4. Species richness leveled off between 1991 and 2005, except for Transect X that had a peak in 1986-7. After an extreme rainfall event in August 18, 1990, Transect V had an average water depth of 0.70 cm, W had 7.1 cm, and X had 26.90 cm. Richness in Transect X declined to a low level in 1990 and 1991 after the extreme flooding event because this transect had the deepest surface water. 5. Typical late successional vegetation associations developed since 1991 include blue joint grass (Calamagrostis canadensis) and buttonbush (Cephalanthus occidentalis), but large areas consist of disturbance-dependent mosaics of rush (Juncus effusus) and other species. The large expanses of woolly sedge (Scirpus cyperinus) that dominated in the 1980’s was replaced by rush. 6. Late-successional associations (Glyceria canadensis and Calamagrostis canadensis) were closer to the wetland edge compared to the other associations after the dewatering. This pattern occurred because wet meadow vegetation persisted at the wetland edge during the period of industrial flooding, but since then these associations expanded greatly into the north half of Blag Slough. 7. Richness, diversity, and floristic quality index (FQI) increased with time at the plot, association, association trajectories, and wetland levels; whereas mean conservatism scores (mean C), the basis of FQI calculation, decreased in time. The high C values, assigned to coastal plain disjunct species and shrubs by judgment of botanists based on their empirical xii experience including regional or state level plant conservation designations are largely responsible for the contradicted trend between FQI and C. Such contradiction highlights a problem with the subjective assignment of C values, and thus the inadequacy of application of FQI in these wetland systems. 8. Occurrence of interveinal clearing in winged sumac (Rhus copallina), late boneset (Eupatorium serotinum), and black dewberry (Rubus occidentalis) suggest a potential phytotoxicity by heavy metals. However, cause-effect relationship between the metals and the plants are yet to be investigated. Nevertheless, boron and zinc accumulation ratios in leaves of woody plants (Betula populifolia, Populus tremuloides, Rhus copallina, and Rubus sp.) in 1984 suggest that boron and zinc were bioaccumulating in those species. Known toxicity effects of aluminum suggest that plants with vein clearing may be experiencing toxic effects of aluminum despite leaf concentrations 58 to 193 ppm. 9. In a greenhouse experiment, rye (Secale cereale) and radish (Raphanus sativus) germinated poorly in the sediments from Blag Slough having high concentrations of heavy metals (ZN, Mn, B, and NH4+) compared to potting soil. However, rye and radish plants grown in Blag Slough soil had shorter shoots and roots, lower root and shoot mass, and lower root to shoot mass ratios compared to plants grown in potting soil. These results suggest some effect of the soil constituents on rye and radish growth. 10. Positive signs in the recovery of Blag Slough include the increase in soil pH, the increasing dominance of late successional grasses, and the establishment of wetland zonation relative to seasonal water depth. Some areas of Blag Slough near the fly-ash ponds that continue to have high concentrations of heavy metals continue to be devoid of vegetation or are dominated by early successional species such as green spikerush. Localized heavy metal concentrations, evidence for zinc and boron bioaccumulation in 1984, vein clearing that persists today, effects of soil on rye and racish growth, and slow succession in the southern portion of Blag Slough suggest further toxicity study is necessary to better assess the impacts on this wetland ecosystem and identify restoration actions.

Indiana↗

Vegetation sampling and management

What is the utility of vegetation measurements for wildlife managers? In the prairie, savanna, tundra, forest, steppe, and wetland regions of the world, mixtures of plant species provide wildlife with food, cover and, in some circumstances, water; the 3 essential habitat elements necessary to sustain viable wildlife populations. We define habitat in reference to use of a vegetation type by an animal (e.g., deer habitat) and vegetation type when referring to differences in vegetation stands (e.g., marsh vegetation type versus tall grass prairie vegetation type; Hall et al. 1997). In strict definition, the variety of wildlife using plants ranges from snails and voles (Microtus spp.) to bison (Bison bison) and elephants (Loxodonta spp.) in uplands and from mosquitoes and ducks to muskrats (Ondatra zibethicus) and manatees (Trichechus manatus) in wetlands. Through evolutionary processes, some wildlife species are totally dependent on vegetation for all annual life requirements, whereas other species use vegetation only for cover or food. Regardless of the role of vegetation in the sustenance of wildlife, any management or research project that requires evaluation of wildlife and vegetation type relationships on a unit of land will necessitate some form of vegetation measurement. The term vegetation can refer to a single plant or species on a specific site or a community in the landscape. Vegetation may occur naturally or be introduced, and may be live or dead. Uses of vegetation measurements are many: (1) evaluation of vegetation response to management practices, (2) estimation of carrying capacity and/or forage production, (3) characterization of cover and habitat components for an endangered species, or (4) long-term monitoring of the general trend of plant vigor or vegetation type condition. Surveying and measuring quantity and quality of vegetation within habitats are basic to wildlife research and management. Grassland, shrubland, and woodland vegetation types are comprised of populations in which individual plants are usually too numerous to inventory completely. Consequently, wildlife biologists usually use sampling techniques to make inferences about the total plant population within a given vegetation type. Vegetation sampling methodologies have evolved within several ecological disciplines (e.g., plant ecology, forestry, rangeland science) and for a variety of management or research objectives (e.g., estimating forage for ungulates, describing habitat use by passerine birds). Description of every method that has been used to sample vegetation is beyond the scope of this chapter. We describe how to measure vegetation structure, which Dansereau (1957) defined as the spatial organization (distribution) of individuals that form a stand. We have organized this chapter into a description of basic methods of vegetation sampling with examples of how those methods have been applied or modified in wildlife research and management. We assume the investigator/reader has adequate knowledge of the concepts of wildlife ecology, primary habitat requirements of wildlife species under study, and ability to systematically identify the species of wildlife and vascular plants within the geographical area of investigation.

Book chapter↗

2023-2024 Coastal sage scrub and chaparral community monitoring for western San Diego County

Western San Diego County is dominated by shrublands supporting biologically diverse native plant and animal communities. Widespread urbanization has led to regional habitat loss and fragmentation, and many species in these shrubland communities are rare, threatened, or endangered. Large-scale, multiple-species conservation planning has resulted in a regional preserve system that focuses on these shrubland communities. Several large-scale threats are leading to type conversion from shrub-dominated to non-native invasive annual grass-dominated vegetation. To understand the changes that are occurring to native shrublands, we have developed a vegetation monitoring program with several components at multiple spatial scales, focused on quantifying coastal sage scrub (CSS) and chaparral vegetation community characteristics. Several drivers of change associated with type conversion of native shrubland to non-native annual grassland have been identified by previous research including increasing fire frequency, nitrogen deposition from air pollution, and prolonged and intense drought associated with changing climate. Loss of ecological integrity indices have been proposed as useful measures of the threat of degradation and type conversion of shrublands in San Diego County. For this study, ecological integrity is defined as a system’s ability to maintain species’ relationships and functions comparable to natural habitat in the region. Previous studies have identified the percent cover of invasive non-native annual grasses as a proxy for overall ecological degradation (loss of integrity) that is consistent across native taxonomic groups. Increased cover of non-native grass is associated with lower integrity of the shrubland vegetation community as shrub-associated plant and animal species are replaced by species preferring grassy and disturbed habitats. The objectives of this CSS and chaparral vegetation community monitoring plan are to: 1) Determine the distribution, composition, structure, and integrity of CSS and chaparral vegetation communities on conserved lands in western San Diego County, 2) Identify whether these attributes of the vegetation communities are changing over time, and 3) Evaluate relationships of known drivers of change (threats) and environmental factors in association with changes in vegetation community attributes. The CSS and chaparral vegetation community monitoring program is divided into four components: 1) vegetation mapping, 2) GIS/remote sensing office analysis of landscape-scale data, 3) permanent field plots using Unmanned Aerial Systems (UAS) and field data collections, and 4) animal and target species surveys and rapid assessment protocols. The first component, which is not detailed in this vegetation monitoring plan, aims to map vegetation communities every 10-15 years based on a classification developed for western San Diego County. High resolution aerial imagery will be used to update the 2012 vegetation map and expand it across the entire study area. The second component uses remote sensing models to annually track ecological integrity of shrublands across the study area and will include a map of areas of change and areas of stability over several decades. These landscape-scale integrity classifications will be used to analyze ecological processes, threats, and abiotic factors relative to changes to shrubland ecological integrity over time and space. The third component includes field surveys of 100 permanent plots across areas historically mapped as shrublands. Surveys in the 1930s mapped vegetation types using plot data. By using this historical classification map, we included areas that have already type-converted from shrubland to non-native annual grassland. The plots were split between CSS (55 plots) and chaparral (45 plots) and stratified into four geographical eco-subregions to guarantee coverage over small patches of habitat along the heavily developed coast. Surveys will include the collection of UAS imagery at a very high resolution. Species-level identifications will be made from the imagery based on a plant list compiled of all species detected in the plot during a thorough field survey by botanists, combined with geo-referenced samples of plant species locations. In addition, herbaceous cover will be estimated in the field using nine 1-m diameter circles (one per subplot) to obtain ocular estimates of cover for each plant species within the circle frame. Soil samples will be collected and analyzed for important element compositions. These data will be analyzed to evaluate plot-level ecological integrity based on species composition and cover. Repeated monitoring will allow evaluation of changes in vegetation attributes over time with known drivers or threats and other environmental factors. In addition, analyses will focus on indicator species and various measures of biological diversity for the vegetation communities. Finally, animal species and rare plants will be assessed using either taxa-based rapid assessment protocols or specialized species-specific protocols for rarer species. The purpose of these assessments is to document the status, habitat, and threat covariates of specific species and confirm the species composition and diversity of animal taxonomic groups (e.g., pollinators). Diversity and abundance of animal species at vegetation plots will be used to refine measures and thresholds of ecological integrity. Rapid assessment protocols for animal taxonomic groups can include multiple detection methods such as, camera traps, cover boards, and bird point counts. Pollinators will be monitored at plots using a protocol currently being developed in conjunction with but separately from this plan. Target rare plant species will be monitored using the regional Inspect and Manage (IMG) protocol that measures the status of rare plant occurrences and habitat and threat covariates over time. Species-specific animal survey methods will be refined as these species are prioritized for future monitoring. The goal of this monitoring program is to classify CSS and chaparral vegetation community integrity, identify areas of degradation across western San Diego County, and characterize drivers, and environmental factors associated with loss of ecological integrity. A combination of vegetation mapping, landscape-scale remote sensing, and field plots will be used to address all the aspects of our research questions. Data compiled and collected will be available to conservation partners to help inform future management decisions.

California↗

Evidence of shift in C 4 species range in central Argentina during the late Holocene

Aim Millennial-scale biogeographic changes are well understood in many parts of the world, but little is known about long-term vegetation dynamics in subtropical regions. Here we investigate shifts in C 3 /C 4 plant abundance occurred in central Argentina during the past few millennia Methods We determined present day soil organic matter δ 13 C signatures of grasslands, shrublands and woodlands, containing different mixtures of C 3 and C 4 plants. We measured past changes in the relative cover of C 3 /C 4 plants by comparing δ 13 C values in soil profiles with present day δ 13 C signatures. We analyzed 14 C activity in soil depths that showed major changes in vegetation. Results Present day relative cover of C 3 /C 4 plants determines whole ecosystem δ 13 C signatures integrated as litter and superficial soil organic matter (R 2 = 0.78; p < 0.01). Deeper soils show a consistent shift in δ 13 C, indicating a continuous replacement of C 4 by C 3 plants since 3,870 (±210) YBP. During this period, the relative abundance of C 3 plants increased 32% (average across sites) with significant changes being observed in all studied ecosystems. Conclusions Our results show that C 4 species were more abundant in the past, but C 3 species became dominant during the late Holocene. We identified increases in the relative C 3 /C 4 cover in grasslands, shrublands and woodlands, suggesting a physiological basis for changes in vegetation. The replacement of C 4 by C 3 plants coincided with changes in climate towards colder and wetter conditions and could represent a climatically driven shift in the C 4 species optimum range.

Plant and Soil↗

Seasonal assembly of arthropod communities on milkweeds experiencing simulated herbivory

The seasonal assembly of arthropod communities is shaped by biotic and abiotic aspects of the habitat that limit the appearance or activity phenology of potential community members. In addition, previous interactions within the community, such as herbivore-induced plant defensive responses, aggregation, and predator avoidance likely affect the assembly of arthropod communities on individual plants. We observed the phenology of arthropod communities and defensive plant traits on 100 milkweed ( Asclepias eriocarpa ) individuals at monthly intervals over a growing season. We experimentally wounded a subset of plants each month (April–August) to observe the effect of simulated added herbivore damage on the seasonal assembly of these arthropod communities. All plant traits and measures of arthropod communities changed over the season. The observed response to experimental leaf damage suggested a trend of induced susceptibility in early months, but not late months. Plants receiving early-season simulated herbivory experienced more subsequent leaf damage than unmanipulated plants. We observed several lagged correlations in our study indicating that blue milkweed beetle ( Chrysochus cobaltinus ) abundance was lower in months following high natural leaf damage, and that the abundance of a secondary omnivore ( Lygaeus kalmii ) and total predator abundance tended to follow months with high C. cobaltinus abundance. Ahistorical habitat factors determined much of the observed seasonality of arthropod communities, but induced responses to simulated herbivory also contributed historical effects that influenced arthropod community assembly.

Arthropod-Plant Interactions↗

Lianas escape self-thinning: Experimental evidence of positive density dependence in temperate lianas Celastrus orbiculatus and C. scandens

The neighborhood density of plants strongly affects their growth, reproduction, and survival. In most cases, high density increases competition and negatively affects a focal plant in predictable ways, leading to the self-thinning law. There are, however, situations in which high densities of plants facilitate focal plant performance, resulting in positive density dependence. Despite their importance in forest gap dynamics and distinctive growth form, there have been very few studies of the effect of density on lianas or vines. We grew an invasive ( Celastrus orbiculatus ) and a native ( Celastrus scandens ) liana species together in three different density treatments, while also manipulating the light and support availability. We found that across treatment conditions, C. orbiculatus always out-performed C. scandens , showing greater relative growth rate in height and diameter, greater biomass and higher survival. Both species responded similarly to the density treatments: with plants in high density not showing a decrease in relative height growth rate compared to medium density. Aboveground biomass for C. scandens was not affected by density, while for C. orbiculatus , the most massive plants were growing in medium density without support. More surprisingly, survival analysis indicated that the two species both had significantly lower mortality rates in the highest density treatment; this trend held true across the other treatments of light and supports. More generally, this study demonstrates that these lianas can escape the consequences of high density and thus the self-thinning law that affects self-supporting plants. This suggests a broader hypothesis about lianas in general: their greater flexibility in allocating growth resources allows them to grow taller and thinner without collapsing and thereby potentially escape shading and mortality even at high densities.

Perspectives in Plant Ecology, Evolution and Syste↗

Demographic patterns of Ferocactus cylindraceus in relation to substrate age and grazing history

Three subpopulations of Ferocactus cylindraceus, a short-columnar cactus of the Sonoran and Mojave deserts, were sampled in Grand Canyon, Arizona, USA, at sites representing a range of substrate ages and different grazing histories. Age-height relations were determined from annual growth, then used to estimate probable year of establishment for each cohort. Eight years between 1944 and 1992 were especially favorable for establishment. Six of these 8 years coincided with El Nino-Southern Oscillation conditions, indicating that as for many woody plants in arid regions, somewhat unusual climatic conditions are necessary if populations are to replace themselves. Comparison of age structures showed that established and developing populations have somewhat different dynamics in that the rate of population increase was slowest on the youngest terrace. On the ancient terraces, about half the plants were less than 25 years old. Plants older than 40 years were few; however the oldest plants in the study (about 49 years) grew on the ancient terraces. On the recent terrace, 76% of the subpopulation was 25 years or younger, and the oldest living plant was about 36 years of age. The age structures of subpopulations on grazed and ungrazed sites also differed markedly. On ungrazed sites, subpopulations were more or less at equilibrium, with enough young plants to replace old ones as they died. In contrast, the subpopulation on the grazed site was in a state of marked disequilibrium. Grazing before 1981 largely extirpated a palatable subshrub that was probably an important nurse plant. Until the shrub population at Indian Canyon recovers from decades of burro grazing, a rebound in E cylindraceus establishment is not to be expected.

Plant Ecology↗

Can differences in phosphorus uptake kinetics explain the distribution of cattail and sawgrass in the Florida Everglades?

Background Cattail ( Typha domingensis ) has been spreading in phosphorus (P) enriched areas of the oligotrophic Florida Everglades at the expense of sawgrass ( Cladium mariscus spp. jamaicense ). Abundant evidence in the literature explains how the opportunistic features of Typha might lead to a complete dominance in P-enriched areas. Less clear is how Typha can grow and acquire P at extremely low P levels, which prevail in the unimpacted areas of the Everglades. Results Apparent P uptake kinetics were measured for intact plants of Cladium and Typha acclimated to low and high P at two levels of oxygen in hydroponic culture. The saturated rate of P uptake was higher in Typha than in Cladium and higher in low-P acclimated plants than in high-P acclimated plants. The affinity for P uptake was two-fold higher in Typha than in Cladium , and two- to three-fold higher for low-P acclimated plants compared to high-P acclimated plants. As Cladium had a greater proportion of its biomass allocated to roots, the overall uptake capacity of the two species at high P did not differ. At low P availability, Typha increased biomass allocation to roots more than Cladium . Both species also adjusted their P uptake kinetics, but Typha more so than Cladium . The adjustment of the P uptake system and increased biomass allocation to roots resulted in a five-fold higher uptake per plant for Cladium and a ten-fold higher uptake for Typha . Conclusions Both Cladium and Typha adjust P uptake kinetics in relation to plant demand when P availability is high. When P concentrations are low, however, Typha adjusts P uptake kinetics and also increases allocation to roots more so than Cladium , thereby improving both efficiency and capacity of P uptake. Cladium has less need to adjust P uptake kinetics because it is already efficient at acquiring P from peat soils (e.g., through secretion of phosphatases, symbiosis with arbuscular mycorrhizal fungi, nutrient conservation growth traits). Thus, although Cladium and Typha have qualitatively similar strategies to improve P-uptake efficiency and capacity under low P-conditions, Typha shows a quantitatively greater response, possibly due to a lesser expression of these mechanisms than Cladium . This difference between the two species helps to explain why an opportunistic species such as Typha is able to grow side by side with Cladium in the P-deficient Everglades.

Florida↗

Rehabilitation of lands mined for limestone in the Indian desert

In the Indian desert, the economics of mining is second only to agriculture in importance. However, research on the rehabilitation of land disturbed by mining has only recently received serious attention. An attempt has been made to determine both the qualitative and quantitative success of rehabilitation plans used to revegetate limestone mine spoils in an area near Barna, northwest arid India. Rehabilitation success was achieved using a combination of rainwater harvesting techniques, soil amendment application approaches, plant establishment methods and the selection of appropriate germplasm material (trees, shrubs and grasses). It is expected that the resulting vegetative cover will be capable of self-perpetuation under natural conditions while at the same time meeting the land-use needs of the local people. The minespoils have adequate levels of the major nutrients (except P, Mo and Se) for proper plant and grazing animal health. Levels of organic matter are low whereas total B concentrations are exceptionally high. Also, the population of soil fungi, Azotobactor, and nitrifying bacteria is negligible. Enhanced plant growth was achieved in treated plots, compared to control plots, where spoil moisture storage was improved by 5-45 per cent. Due to the decomposition of farmyard manure and nitrogen fixation by planted leguminous plant species, the electrical conductance of treated mine spoils increased threefold, CaCO3 content decreased from 20??0 to 5??2 per cent, and organic carbon, P, K, and biological activity increased significantly. The rehabilitation protocol used at the site appears to have been successful because plant self-regeneration is occurring. The increased diversity of woody perennials resulted in 'dominance' being better shared among species and 'evenness' being increased within the plant community elements. The early to mid-successional trends are continuing for six years following initial rehabilitation. This study developed methods for the rehabilitation of lands mined for limestone and has also resulted in an understanding of rehabilitation processes in arid regions with an emphasis on the long-term monitoring of rehabilitation success. Copyright ?? 2000 John Wiley & Sons, Ltd.

Land Degradation and Development↗

The role of microtopography and resident species in post-disturbance recovery of arid habitats in Hawaiʻi

Habitat-suitability indices (HSI) have been employed in restoration to identify optimal sites for planting native species. Often, HSI are based on abiotic variables and do not include biotic interactions, even though similar abiotic conditions can favor both native and nonnative species. Biotic interactions such as competition may be especially important in invader-dominated habitats because invasive species often have fast growth rates and can exploit resources quickly. In this study, we test the utility of an HSI of microtopography derived from airborne LiDAR to predict post-disturbance recovery and native planting success in native shrub-dominated and nonnative, invasive grass-dominated dryland habitats in Hawaiʻi. The HSI uses high-resolution digital terrain models to classify sites' microtopography as high, medium, or low suitability, based on wind exposure and topographic position. We used a split-plot before-after-control-impact design to implement a disturbance experiment within native shrub ( Dodonaea viscosa ) and nonnative, invasive grass ( Cenchrus clandestinus )-dominated ecosystems across three microtopography categories. In contrast to previous studies using the same HSI, we found that microtopography was a poor predictor of pre-disturbance conditions for soil nutrients, organic matter content, or foliar C:N, within both Dodonaea and Cenchrus vegetation types. In invader-dominated Cenchrus plots, microtopography helped predict cover, but not as expected (i.e., highest cover would be in high-suitability plots): D. viscosa had the greatest cover in low-suitability and C. clandestinus had the greatest cover in medium-suitability plots. Similarly, in native-dominated Dodonaea plots, microtopography was a poor predictor of D. viscosa , C. clandestinus , and total plant cover. Although we found some evidence that microtopography helped inform post-disturbance plant recovery of D. viscosa and total plant cover, vegetation type was a more important predictor. Important for considering the success of plantings, percent cover of D. viscosa decreased while percent cover of C. clandestinus increased within both vegetation types 20 months after disturbance. Our results are evidence that HSIs based on topographic features may prove most useful for choosing planting sites in harsh habitats or those already dominated by native species. In more productive habitats, competition from resident species may offset any benefits gained from “better” suitability sites.

Hawaii↗

Diet of a rare herbivore based on DNA metabarcoding of feces: Selection, seasonality, and survival

In herbivores, survival and reproduction are influenced by quality and quantity of forage, and hence, diet and foraging behavior are the foundation of an herbivore's life history strategy. Given the importance of diet to most herbivores, it is imperative that we know the species of plants they prefer, especially for herbivorous species that are at risk for extinction. However, it is often difficult to identify the diet of small herbivores because: (a) They are difficult to observe, (b) collecting stomach contents requires sacrificing animals, and (c) microhistology requires accurately identifying taxa from partially digested plant fragments and likely overemphasizes less-digestible taxa. The northern Idaho ground squirrel ( Urocitellus brunneus ) is federally threatened in the United States under the Endangered Species Act. We used DNA metabarcoding techniques to identify the diet of 188 squirrels at 11 study sites from fecal samples. We identified 42 families, 126 genera, and 120 species of plants in the squirrel's diet. Our use of three gene regions was beneficial because reliance on only one gene region (e.g., only trnL ) would have caused us to miss >30% of the taxa in their diet. Northern Idaho ground squirrel diet differed between spring and summer, frequency of many plants in the diet differed from their frequency within their foraging areas (evidence of selective foraging), and several plant genera in their diet were associated with survival. Our results suggest that while these squirrels are generalists (they consume a wide variety of plant species), they are also selective and do not eat plants relative to availability. Consumption of particular genera such as Perideridia may be associated with higher overwinter survival.

Idaho↗