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At least 1,693 records · Page 94Linked to original sources
USGS2024

Using explainable machine learning methods to evaluate vulnerability and restoration potential of ecosystem state transitions

Ecosystem state transitions can be ecologically devastating or be a restoration success. State transitions are common within aquatic systems worldwide, especially considering human-mediated changes to land use and water use. We created a transferable conceptual framework to enable multiscale assessments of state resilience and early warnings of state transitions that can inform strategic restorations and avoid ecosystem collapse. The conceptual framework integrated machine learning predictions with ecosystem state concepts (e.g., state classification, gradients of vulnerability, and recovery potential leading to state transitions) and was devised to investigate possible environmental drivers. As an application of the framework, we generated prediction probabilities of submersed aquatic vegetation (SAV) presence at nearly 10,000 sites in the Upper Mississippi River (United States). Then, we used an interpretability method to explain model predictions to gain insights into possible environmental drivers and thresholds or linear responses of SAV presence and absence. Model accuracy was 89% without spatial bias. Average water depth, suspended solids, substrate, and distance to nearest SAV were the best predictors and likely environmental drivers of SAV habitat suitability. These environmental drivers exhibited nonlinear, threshold-type responses for SAV. All the results are also presented in an online dashboard to explore results at many spatial scales. The habitat suitability model outputs and prediction explanations from many spatial scales (4 m to 400 km of river reach) can inform research and restoration planning.

Conservation Biology↗
USGS2016

Cannibalistic-morph Tiger Salamanders in unexpected ecological contexts

Barred tiger salamanders [Ambystoma mavortium (Baird, 1850)] exhibit two trophic morphologies; a typical and a cannibalistic morph. Cannibalistic morphs, distinguished by enlarged vomerine teeth, wide heads, slender bodies, and cannibalistic tendencies, are often found where conspecifics occur at high density. During 2012 and 2013, 162 North Dakota wetlands and lakes were sampled for salamanders. Fifty-one contained A. mavortium populations; four of these contained cannibalistic morph individuals. Two populations with cannibalistic morphs occurred at sites with high abundances of conspecifics. However, the other two populations occurred at sites with unexpectedly low conspecific but high fathead minnow [Pimephales promelas (Rafinesque, 1820)] abundances. Further, no typical morphs were observed in either of these later two populations, contrasting with earlier research suggesting cannibalistic morphs only occur at low frequencies in salamander populations. Another anomaly of all four populations was the occurrence of cannibalistic morphs in permanent water sites, suggesting their presence was due to factors other than faster growth allowing them to occupy ephemeral habitats. Therefore, our findings suggest environmental factors inducing the cannibalistic morphism may be more complex than previously thought.

North Dakota↗
USGS2005

Upper Auglaize watershed AGNPS modeling project

The Upper Auglaize Watershed agricultural non-point source modeling project was an interagency effort to use a Geographic Information System (GIS)-based modeling approach for assessing and reducing pollution from agricultural runoff and other non-point sources. This project applied the U.S. Department of Agriculture (USDA), Agricultural Research Service’s AGricultural Non-Point Source (AGNPS) suite of models to the Upper Auglaize River Watershed, a major watershed within the Maumee River Basin. This modeling project was conducted by an interagency team consisting of a partnership between the: (1) USDA, Agricultural Research Service (ARS); (2) USDA, Natural Resources Conservation Service (NRCS); (3) U.S. Army Corps of Engineers (USACE); (4) U.S. Geological Survey (USGS); (5) Ohio State University; (6) University of Toledo (UT); (7) Heidelberg College; (8) Ohio Department of Natural Resources (ODNR), Division of Soil and Water Conservation; (9) Ohio Environmental Protection Agency (OEPA); and (10) Allen, Auglaize, Van Wert, and Putnam Soil and Water Conservation Districts. The partnership was the first step in a process to eventually apply the model in a portioned subset of watersheds for the Maumee Basin, and then to link them to form a comprehensive basin-wide model This work was performed under the authority of Section 516(e) of the Water Resources Development Act (WRDA) of 1996, as amended, for the purpose of assisting State and local watershed managers with their evaluation, prioritization and implementation of alternatives for soil conservation, sediment trapping and non-point source pollution prevention in the Upper Auglaize River watershed. The project team, working in a cooperative effort, used the models to determine sediment sources, contributing locations, and the effect of application of best management practices (BMPs) on rates of sediment delivery to the mouth of the watershed. The results will be used to guide conservation incentive and land treatment programs. The team relied heavily on Geographic Information System (GIS)-based applications to expedite the application of the model. The results of the analysis demonstrated that the application of BMPs would have a positive effect on reducing the loadings of sediment leaving the mouth of the Upper Auglaize Watershed. An application of 17 percent new no-till acres and eight percent new grassland acres, when randomly applied to the watershed, reduced loadings at the mouth to 82 percent of the simulated existing condition loadings. No-till, conversion of cropland to grassland, other uses including grass buffers, and reforestation of parts of the watershed, were all shown by the model to have a measurable effect on reducing sediment loads. Conversion of all of the cropland in the watershed to no-till would reduce the average unit load (tons of sediment per acre) leaving the mouth of the watershed to a level that is 42 percent of the simulated existing condition load. Ephemeral gullies were found to be the primary source of erosion (72 percent), sediment yield (73 percent), and sediment loading (73 percent). Controlling sediment load means controlling gully erosion and possibly trapping sediment yield before it reaches the stream system. Most BMPs (e.g., no-till, conversion of cropland, etc.) that reduce sheet and rill erosion and its sediment yield will also reduce gully erosion and its sediment yield. However, grassed waterways, which have no effect on sheet and rill erosion, are frequently an effective BMP to prevent ephemeral gullies. And, of course, riparian vegetation and sediment traps would reduce the delivery ratios of all types of landscape erosion. New techniques were developed by the team to quantify the ephemeral gully erosion within the model. When calibrated to available stream gage data the model suggests that more (73% in the existing condition simulation) of the sediment load originates from ephemeral gully erosion than from traditional sheet and rill erosion. The model quantified the value of tile drainage in reducing the sediment load from the watershed. Loadings under drained conditions were always less than loadings under undrained conditions for otherwise identical land uses. The average sediment load of all alternatives for drained loadings was 89.2 percent of the load for the corresponding undrained loadings. The model established that while many conservation incentive programs treat tile drainage as a production practice, significant erosion and sediment control benefits are provided by the practice in comparison to cultivation in an undrained state.

Ohio↗
USGS2000

Manatee mortality in Puerto Rico

The most pressing problem in the effective management of the West Indian manatee (Trichechus manatus) in Puerto Rico is mortality due to human activities. We assessed 90 cases of manatee strandings in Puerto Rico based on historical data and a coordinated carcass salvage effort from 1990 through 1995. We determined patterns of mortality, including type of event, condition of carcasses, spatial and temporal distribution, gender, size/age class, and the cause of death. The spatial distribution of stranding events was not uniform, with the north, northeast, and south coasts having the highest numbers. Six clusters representing the highest incidence included the areas of Fajardo and Ceiba, Bahia de Jobos, Toa Baja, Guayanilla, Cabo Rojo, and Rio Grande to Luquillo. The number of reported cases has increased at an average rate of 9.6%/yr since 1990. The seasonality of stranding events showed a bimodal pattern, from February through April and in August and September. Most identified causes of death were due to human interaction, especially captures and watercraft collisions. Natural causes usually involved dependent calves. From 1990 through 1995, most deaths were attributed to watercraft collisions. A reduction in anthropogenic mortality of this endangered species can be accomplished only through education and a proactive management and conservation plan that includes law enforcement, mortality assessment, scientific research, rescue and rehabilitation, and inter- and intraagency cooperation.

Environmental Management↗
USGS2017

A mechanistic assessment of seasonal microhabitat selection by drift-feeding rainbow trout Oncorhynchus mykiss in a southwestern headwater stream

The positioning of fishes within a riverscape is dependent on the proximity of complementary habitats. In this study, foraging and non-foraging habitat were quantified monthly over an entire year for a rainbow trout ( Oncorhynchus mykiss ) population in an isolated, headwater stream in southcentral New Mexico. The stream follows a seasonal thermal and hydrologic pattern typical for a Southwestern stream and was deemed suitable for re-introduction of the native and close relative, Rio Grande cutthroat trout ( O. clarkii virginalis ). However, uncertainty associated with limited habitat needed to be resolved if repatriation of the native fish was to be successful. Habitat was evaluated using resource selection functions with a mechanistic drift-foraging model to explain trout distributions. Macroinvertebrate drift was strongly season- and temperature-dependent (lower in winter and spring, higher in summer and fall). Models identified stream depth as the most limiting factor for habitat selection across seasons and size-classes. Additionally, positions closer to cover were selected during the winter by smaller size-classes (0, 1, 2), while net energy intake was important during the spring for most size-classes (0, 1, 2, 3). Drift-foraging models identified that 81% of observed trout selected positions that could meet maintenance levels throughout the year. Moreover, 40% of selected habitats could sustain maximum growth. Stream positions occupied by rainbow trout were more energetically profitable than random sites regardless of season or size-class. Larger size-classes (3, 4+) were energetically more limited throughout the year than were smaller size-classes. This research suggests that habitat in the form of deep pools is of paramount importance for rainbow trout or native cutthroat trout.

New Mexico↗
USGS2014

Temporal and spatial distributions of cold-water corals in the Drake Passage: insights from the last 35,000 years

Scleractinian corals have a global distribution ranging from shallow tropical seas to the depths of the Southern Ocean. Although this distribution is indicative of the corals having a tolerance to a wide spectrum of environmental conditions, individual species seem to be restricted to a much narrower range of ecosystem variables. One way to ascertain the tolerances of corals, with particular focus on the potential impacts of changing climate, is to reconstruct their growth history across a range of environmental regimes. This study examines the spatial and temporal distribution of the solitary scleractinian corals Desmophyllum dianthus, Gardineria antarctica, Balanophyllia malouinensis, Caryophyllia spp. and Flabellum spp. from five sites in the Drake Passage which cross the major frontal zones. A rapid reconnaissance radiocarbon method was used to date more than 850 individual corals. Coupled with U-Th dating, an age range of present day back to more than 100 thousand years was established for corals in the region. Within this age range there are distinct changes in the temporal and spatial distributions of these corals, both with depth and latitude, and on millennial timescales. Two major patterns that emerge are: (1) D. dianthus populations show clear variability in their occurrence through time depending on the latitudinal position within the Drake Passage. North of the Subantarctic Front, D. dianthus first appears in the late deglaciation (~17,000 years ago) and persists to today. South of the Polar Front, in contrast, early deglacial periods, with a few modern occurrences. A seamount site between the two fronts exhibits characteristics similar to both the northern and southern sites. This shift across the frontal zones within one species cannot yet be fully explained, but it is likely to be linked to changes in surface productivity, subsurface oxygen concentrations, and carbonate saturation state. (2) at locations where multiple genera were dated, differences in age and depth distribution of the populations provide clear evidence that each genus has unique environmental requirements to sustain its population.

Deep-Sea Research Part II: Topical Studies in Ocea↗
USGS2018

A surrogate regression approach for computing continuous loads for the tributary nutrient and sediment monitoring program on the Great Lakes

Water quality (WQ) in many Great Lake tributaries has been degraded (increased nutrient and sediment concentrations) due to changes in their watersheds, resulting in downstream eutrophication. As part of the Great Lakes Water Quality Agreement, specific goals were established for loading of specific constituents (e.g., phosphorus). In 2010, the Great Lakes Restoration Initiative was launched to identify problem areas, accelerate restoration efforts, and track their progress. In 2011, the U.S. Geological Survey established a monitoring program on 30 tributaries to the lakes, representing ~ 46% of the U.S. draining area and the spectrum of land uses. Discrete measurements of nutrients and suspended sediment, and continuous measurements of flow and WQ surrogates (turbidity, temperature, specific conductance, pH, and dissolved oxygen) are being collected in these tributaries to document their WQ and estimate continuous (5-min) loading. To estimate loadings, two regression models were developed for each constituent for each site: one using continuous flow and a seasonality factor; and one using flow, seasonality, and continuous surrogates. Variables included in the final models for each constituent were chosen from the explanatory variables that worked “best” for all sites. In computing loads, when continuous surrogate data were unavailable for short periods, loads were computed using the flow and seasonality models. Prediction intervals for all loads were calculated using results from both models. These results provide a better understanding of short-term variability and long-term changes in loading affecting the environmental health of the Great Lakes than traditional regression techniques that employ only flow and seasonality parameters.

Great Lake↗
USGS2019

A 50-year Sr/Ca time series from an enclosed, shallow-water Guam coral: In situ monitoring and extraction of a temperature trend, annual cycle, and ENSO and PDO signals

Located on the northern edge of the West Pacific Warm Pool and having a developed economy and modern infrastructure, Guam is well positioned and equipped for obtaining natural records of the west Pacific maritime paleoclimate. This study was a proof of concept to explore whether useful climate proxy records might be obtained from coral at readily accessible, even if geochemically nonoptimal, coastal sites. A 50-year Sr/Ca record (1960–2010) was thus obtained from a shallow-water, near-shore Porites lutea colony at a recreational facility inside Guam's Apra Harbor and compared with local and regional meteorological records, including the El Niño–Southern Oscillation (ENSO) and Pacific Decadal Oscillation (PDO) indices. The accessibility of the site enabled documentation of relevant environmental variables for 16 months (September 2009–December 2010): seawater δ 18 O, pH, seawater cations, and nitrate. Time series of seawater δ 18 O, pH, and cations show evidence of freshwater input from direct rainfall and stream discharge into the harbor. An anomalously higher mean and variable concentrations of Ba suggest the presence of river-borne, fine-grained terrigenous sediment. Nevertheless, the Sr/Ca time series reproduces a long-term warming trend seen in historical records of local air temperature and regional sea-surface temperature (SST) and closely tracks the ENSO and PDO indices over the entire 50-year record. The consistency of the results with Guam's historical instrumental records, previous coral δ 18 O results from Guam obtained by others, and previous Sr/Ca proxy results for SST in similar environments elsewhere demonstrate that accessible near-shore sites—where environmental conditions can be monitored—can produce useful Sr/Ca records of local and regional climate phenomena.

Journal of Coastal Research↗
USGS2020

Using NASA Earth observations and Google Earth Engine to map winter cover crop conservation performance in the Chesapeake Bay watershed

Winter cover crops such as barley, rye, and wheat help to improve soil structure by increasing porosity, aggregate stability, and organic matter, while reducing the loss of agricultural nutrients and sediments into waterways. The environmental performance of cover crops is affected by choice of species, planting date, planting method, nutrient inputs, temperature, and precipitation. The Maryland Department of Agriculture (MDA) oversees an agricultural cost-share program that provides farmers with funding to cover costs associated with planting winter cover crops, and the U.S. Geological Survey (USGS) and the U.S. Department of Agriculture-Agricultural Research Service (USDA-ARS) have partnered with the MDA to develop satellite remote sensing techniques for measuring cover crop performance. The MDA has developed the capacity to digitize field boundaries for all fields enrolled in their cover crop programs (>26,000 fields per year) to support a remote sensing performance analysis at a statewide scal,e and has requested assistance with the associated imagery processing from the National Aeronautics and Space Administration (NASA). Using the Google Earth Engine (GEE) cloud computing platform, scripts were developed to process Landsat 5/7/8 and Harmonized Sentinel-2 imagery to measure winter cover crop performance. We calibrated cover crop performance models using linear regression between satellite vegetation indices and USGS / USDA-ARS field sampling data collected on Maryland farms between 2006 and 2012 (1298 samples). Satellite-derived Normalized Difference Vegetation Index (NDVI) values showed significant correlation with the natural logarithm of cover crop biomass ( p ≤0.01, R 2 = 0.56) and with observed percent vegetative ground cover (p ≤0.01, R 2 = 0.68). The GEE scripts were used to composite seasonal maximum NDVI values for each enrolled cover crop field and calculate performance metrics for the winter and spring seasons of three enrollment years (2014–15, 2015–16, and 2017–18) for four Maryland counties. Results from winter 2017–18 demonstrate that rye and barley fields had higher biomass than wheat fields, and that early planting, along with planting methods that increase seed-soil contact, increased performance. The processing capabilities of GEE will support the MDA in scaling up remote sensing performance analysis statewide, providing information to evaluate the environmental outcomes associated with various agronomic management strategies. The tool can be modified for different seasonal cutoffs, utilize new sensors to capture phenology in winter and spring, and scale to larger regions for use in adaptive management of winter cover crops planted for environmental benefit.

Maryland↗
USGS2013

Diatom evidence for the onset of Pliocene cooling from AND-1B, McMurdo Sound, Antarctica

The late Pliocene, ~ 3.3–3.0 Ma, is the most recent interval of sustained global warmth in the geologic past. This window is the focus of climate reconstruction efforts by the U.S. Geological Survey's Pliocene Research, Interpretation, and Synoptic Mapping (PRISM) Data/Model Cooperative, and may provide a useful climate analog for the coming century. Reconstructions of past surface ocean conditions proximal to the Antarctic continent are essential to understanding the sensitivity of the cryosphere to this key interval in Earth's climate evolution. An exceptional marine sediment core collected from the southwestern Ross Sea (78° S), Antarctica, during ANDRILL's McMurdo Ice Shelf Project preserves evidence of dramatic fluctuations between grounded ice and productive, open ocean conditions during the late Pliocene, reflecting orbitally-paced glacial/interglacial cycling. In this near-shore record, diatom-rich sediments are recovered from interglacial intervals; two of these diatomites, from ~ 3.2 Ma and 3.03 Ma, are within the PRISM chronologic window. The diatom assemblages identified in PRISM-age late Pliocene diatom-rich sediments are distinct from those in mid-Pliocene and later Pliocene/Pleistocene intervals recovered from AND-1B, and comprise both extant taxa with well-constrained ecological preferences and a diverse extinct flora, some members of which are previously undescribed from Antarctic sediments. Both units are dominated by Chaetoceros resting spores, an indicator of high productivity and stratification that is present at much lower abundance in materials both older and younger than the PRISM-age sediments. Newly described species of the genus Fragilariopsis , which first appear in the AND-1B record at 3.2 Ma, are the most abundant extinct members of the PRISM-age assemblages. Other extant species with established environmental affinities, such as Fragilariopsis sublinearis , F . curta , Stellarima microtrias , and Thalassiothrix antarctica , are present at lower abundances. Environmental inferences drawn from extant diatom assemblages are in good agreement with those from Chaetoceros resting spores and the Fragilariopsis radiation. All three lines of evidence indicate the onset of late Pliocene cooling in the Ross Sea near-shore environment at 3.2 Ma, with intensification and possible regional persistence of summer sea ice by 3.03 Ma. An important implication of this research is the indication that the Ross Ice Shelf fluctuated dramatically on orbital timescales at a time when nearshore Antarctic conditions were only modestly warmer than present.

Palaeogeography, Palaeoclimatology, Palaeoecology↗
USGS1992

Effects of acidic deposition on the erosion of carbonate stone - experimental results from the U.S. National Acid Precipitation Assessment Program (NAPAP)

One of the goals of NAPAP-sponsored research on the effects of acidic deposition on carbonate stone has been to quantify the incremental effects of wet and dry deposition of hydrogen ion, sulfur dioxide and nitrogen oxides on stone erosion. Test briquettes and slabs of freshly quarried Indiana limestone and Vermont marble have been exposed to ambient environmental conditions in a long-term exposure program. Physical measurements of the recession of test stones exposed to ambient conditions at an angle of 30?? to horizontal at the five NAPAP materials exposure sites range from ~15 to ~30?? ??m yr-1 for marble, and from ~25 to ~45 ??m yr -1 for limestone, and are approximately double the recession estimates based on the observed calcium content of run-off solutions from test slabs. The difference between the physical and chemical recession measurements is attributed to the loss of mineral grains from the stone surfaces that are not measured in the run-off experiments. The erosion due to grain loss does not appear to be influenced by rainfall acidity, however, preliminary evidence suggests that grain loss may be influenced by dry deposition of sulfur dioxide between rainfall events. Chemical analyses of the run-off solutions and associated rainfall blanks suggest that ~30% of erosion by dissolution can be attributed to the wet deposition of hydrogen ion and the dry deposition of sulfur dioxide and nitric acid between rain events. The remaining ~70% of erosion by dissolution is accounted for by the solubility of carbonate stone in rain that is in equilibrium with atmospheric carbon dioxide ('clean rain'). These results are for marble and limestone slabs exposed at an angle of 30?? from horizontal. The relative contribution of sulfur dioxide to chemical erosion is significantly enhanced for stone slabs having an inclination of 60?? or 85??. The dry deposition of alkaline particulate material has a mitigating effect at the two urban field exposure sites at Washington, DC, and Steubenville, OH.

Conference Paper↗
USGS2011

Climate-induced tree mortality: Earth system consequences

One of the greatest uncertainties in global environmental change is predicting changes in feedbacks between the biosphere and the Earth system. Terrestrial ecosystems and, in particular, forests exert strong controls on the global carbon cycle and influence regional hydrology and climatology directly through water and surface energy budgets [ Bonan , 2008; Chapin et al. , 2008]. According to new research, tree mortality associated with elevated temperatures and drought has the potential to rapidly alter forest ecosystems, potentially affecting feedbacks to the Earth system [ Allen et al. , 2010]. Several lines of recent research demonstrate how tree mortality rates in forests may be sensitive to climate change—particularly warming and drying. This emerging consequence of global change has important effects on Earth system processes (Figure 1).

Eos, Transactions, American Geophysical Union↗
USGS2021

Ten simple rules for creating a scientific web application

The use of scientific web applications (SWApps) across biological and environmental sciences has grown exponentially over the past decade or so. Although quantitative evidence for such increased use in practice is scant, collectively, we have observed that these tools become more commonplace in teaching, outreach, and in science coproduction (e.g., as decision support tools). Despite the increased popularity of SWApps, researchers often receive little or no training in creating such tools. Although rolling out SWApps can be a relatively simple and quick process using modern, popular platforms like R shiny apps or Tableau dashboards, making them useful, usable, and sustainable is not. These 10 simple rules for creating a SWApp provide a foundation upon which researchers with little to no experience in web application design and development can consider, plan, and carry out SWApp projects.

PLOS Computational Biology↗
USGS2007

Desert tortoise hibernation: Temperatures, timing, and environment

This research examined the onset, duration, and termination of hibernation in Desert Tortoises ( Gopherus agassizii ) over several years at multiple sites in the northeastern part of their geographic range, and recorded the temperatures experienced by tortoises during winter hibernation. The timing of hibernation by Desert Tortoises differed among sites and years. Environmental cues acting over the short-term did not appear to influence the timing of the hibernation period. Different individual tortoises entered hibernation over as many as 44 days in the fall and emerged from hibernation over as many as 49 days in the spring. This range of variation in the timing of hibernation indicates a weak influence at best of exogenous cues hypothesized to trigger and terminate hibernation. There do appear to be regional trends in hibernation behavior as hibernation tended to begin earlier and continue longer at sites that were higher in elevation and generally cooler. The emergence date was generally more similar among study sites than the date of onset. While the climate and the subsequent timing of hibernation differed among sites, the average temperatures experienced by tortoises while hibernating differed by only about five degrees from the coldest site to the warmest site. 2007 by the American Society of Ichthyologists and Herpetologists.

Copeia↗
USGS2007

Enhanced Historical Land-Use and Land-Cover Data Sets of the U.S. Geological Survey

Historical land-use and land-cover data, available from the U.S. Geological Survey (USGS) for the conterminous United States and Hawaii, have been enhanced for use in geographic information systems (GIS) applications. The original digital data sets were created by the USGS in the late 1970s and early 1980s and were later converted by USGS and the U.S. Environmental Protection Agency (USEPA) to a geographic information system (GIS) format in the early 1990s. These data were made available on USEPA's Web site since the early 1990s and have been used for many national applications, despite minor coding and topological errors. During the 1990s, a group of USGS researchers made modifications to the data set for use in the National Water-Quality Assessment Program. These edited files have been further modified to create a more accurate, topologically clean, and seamless national data set. Several different methods, including custom editing software and several batch processes, were applied to create this enhanced version of the national data set. The data sets are included in this report in the commonly used shapefile and Tagged Image Format File (TIFF) formats. In addition, this report includes two polygon data sets (in shapefile format) representing (1) land-use and land-cover source documentation extracted from the previously published USGS data files, and (2) the extent of each polygon data file.

Data Series↗
USGS2010

Effects of Changes in Irrigation Practices and Aquifer Development on Groundwater Discharge to the Jobos Bay National Estuarine Research Reserve near Salinas, Puerto Rico

Since 1990, about 75 acres of black mangroves have died in the Jobos Bay National Estuarine Research Reserve near Salinas, Puerto Rico. Although many factors can contribute to the mortality of mangroves, changes in irrigation practices, rainfall, and water use resulted in as much as 25 feet of drawdown in the potentiometric surface of the aquifer in the vicinity of the reserve between 1986 and 2002. To clarify the issue, the U.S. Geological Survey, in cooperation with the Puerto Rico Department of Natural and Environmental Resources, conducted a study to ascertain how aquifer development and changes in irrigation practices have affected groundwater levels and groundwater flow to the Mar Negro area of the reserve. Changes in groundwater flow to the mangrove swamp and bay from 1986 to 2004 were estimated in this study by developing and calibrating a numerical groundwater flow model. The transient simulations indicate that prior to 1994, high irrigation return flows more than offset the effect of reduced groundwater withdrawals. In this case, the simulated discharge to the coast in the modeled area was 19 million gallons per day. From 1994 through 2004, furrow irrigation was completely replaced by micro-drip irrigation, thus eliminating return flows and the simulated average coastal discharge was 7 million gallons per day, a reduction of 63 percent. The simulated average groundwater discharge to the coastal mangrove swamps in the reserve from 1986 to 1993 was 2 million gallons per day, compared to an average simulated discharge of 0.2 million gallons per day from 1994 to 2004. The average annual rainfall for each of these periods was 38 inches. The groundwater discharge to the coastal mangrove swamps in the Jobos Bay National Estuarine Research Reserve was estimated at about 0.5 million gallons per day for 2003-2004 because of higher than average annual rainfall during these 2 years. The groundwater flow model was used to test five alternatives for increasing groundwater discharge to the coastal mangrove swamps to approximately 1.4 million gallons per day: (1) artificially recharging the aquifer with injection wells or (2) by increasing irrigation return flow by going back to furrow irrigation; (3) termination of groundwater withdrawals near the mangroves; (4) reduction of groundwater withdrawals at irrigation wells by 50 percent; and (5) a combination of alternatives 2 and 4 increasing irrigation return flows and decreasing irrigation withdrawals. Each alternative assumed average climatic conditions and groundwater withdrawals at 2004 rates. Alternative 1 required 1.5 million gallons per day of injected water. Alternative 2 required flooding 958 acres with a rate of 1.84 million gallons per day if no crops are grown. Alternative 3 required the termination of 2.44 million gallons per day of withdrawals to achieve 1.34 million gallons per day of discharge to the mangroves. Alternative 4 did not achieve the objective with only 0.80 million gallons per day simulated discharge to the mangroves, while requiring a 1.26 million gallon per day reduction in groundwater withdrawals. Alternative 5 required flooding fields with additional 1.13 million gallons of day and the same reduction in groundwater withdrawals, but did achieve the objective of about 1.4 million gallons per day discharge to the mangroves. Alternative 1, incorporating injection wells near the reserve required the least amount of water to raise groundwater levels and maintain discharge of 1.4 million gallons per day through the mangroves.

Scientific Investigations Report↗
USGS2020

Ontogenetic shifts in mesohabitat use of young-of-year Rio Grande blue sucker in the Big Bend region of the Rio Grande

Alteration of flow regimes by anthropogenic activities is one of the primary environmental problems in riverine systems. Understanding how hydrologic conditions can affect ontogenetic habitat shifts of imperiled fishes is important in order to develop conservation and management strategies for each life-history stage. We examined relationships between the abundance of young-of-the-year (YOY) Rio Grande Blue Sucker and various abiotic variables in the Trans-Pecos region of the Rio Grande in Texas, USA. We used open N -mixture modeling to better understand the factors affecting ontogenetic habitat shifts of the imperiled aridland river fish. In addition, we examined differences in Rio Grande Blue Sucker total length among three mesohabitat types (pool, riffle, and run). The results of open N -mixture modeling suggested that as pool area increased, the abundance of YOY Rio Grande Blue Sucker increased. Total length of YOY Rio Grande Blue Sucker also significantly differed among the three mesohabitat types. The total lengths of YOY Rio Grande Blue Sucker in pool habitats were lower than in other mesohabitats, suggesting that YOY Rio Grande Blue Sucker undergo ontogenetic habitat shifts into greater current velocity habitats as they grow. The habitat associations we documented support the growing body of research emphasizing the importance of maintaining sufficient and appropriately timed flows to avoid prolonged low flows that limit habitat availability for native fish species during sensitive life stages in the Rio Grande and other aridland rivers.

Texas↗
USGS2013

Ecosystem services: developing sustainable management paradigms based on wetland functions and processes

In the late nineteenth century and twentieth century, there was considerable interest and activity to develop the United States for agricultural, mining, and many other purposes to improve the quality of human life standards and prosperity. Most of the work to support this development was focused along disciplinary lines with little attention focused on ecosystem service trade-offs or synergisms, especially those that transcended boundaries of scientific disciplines and specific interest groups. Concurrently, human population size has increased substantially and its use of ecosystem services has increased more than five-fold over just the past century. Consequently, the contemporary landscape has been highly modified for human use, leaving behind a fragmented landscape where basic ecosystem functions and processes have been broadly altered. Over this period, climate change also interacted with other anthropogenic effects, resulting in modern environmental problems having a complexity that is without historical precedent. The challenge before the scientific community is to develop new science paradigms that integrate relevant scientific disciplines to properly frame and evaluate modern environmental problems in a systems-type approach to better inform the decision-making process. Wetland science is a relatively new discipline that grew out of the conservation movement of the early twentieth century. In the United States, most of the conservation attention in the earlier days was on wildlife, but a growing human awareness of the importance of the environment led to the passage of the National Environmental Policy Act in 1969. Concurrently, there was a broadening interest in conservation science, and the scientific study of wetlands gradually gained acceptance as a scientific discipline. Pioneering wetland scientists became formally organized when they formed The Society of Wetland Scientists in 1980 and established a publication outlet to share wetland research findings. In comparison to older and more traditional scientific disciplines, the wetland sciences may be better equipped to tackle today’s complex problems. Since its emergence as a scientific discipline, the study of wetlands has frequently required interdisciplinary and integrated approaches. This interdisciplinary/integrated approach is largely the result of the fact that wetlands cannot be studied in isolation of upland areas that contribute surface and subsurface water, solutes, sediments, and nutrients into wetland basins. However, challenges still remain in thoroughly integrating the wetland sciences with scientific disciplines involved in upland studies, especially those involved with agriculture, development, and other land-conversion activities that influence wetland hydrology, chemistry, and sedimentation. One way to facilitate this integration is to develop an understanding of how human activities affect wetland ecosystem services, especially the trade-offs and synergisms that occur when land-use changes are made. Used in this context, an understanding of the real costs of managing for a particular ecosystem service or groups of services can be determined and quantified in terms of reduced delivery of other services and in overall sustainability of the wetland and the landscapes that support them. In this chapter, we discuss some of the more salient aspects of a few common wetland types to give the reader some background on the diversity of functions that wetlands perform and the specific ecosystem services they provide to society. Wetlands are among the most complex ecosystems on the planet, and it is often difficult to communicate to a diverse public all of the positive services wetlands provide to mankind. Our goal is to help the reader develop an understanding that management options can be approached as societal choices where decisions can be made within a spatial and temporal context to identify trade-offs, synergies, and effects on long-term sustainability of wetland ecosystems. This will be especially relevant as we move into alternate climate futures where our portfolio of management options for mitigating damage to ecosystem function or detrimental cascading effects must be diverse and effective.

Book chapter↗