Fish bioindicators of ecosystem condition at the Calcasieu Estuary, Louisiana
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In 2002, fine-grained sediment (sand, silt, and clay) monitoring in the Colorado River downstream from Glen Canyon Dam was initiated to survey channel topography at scales previously unobtainable in this canyon setting. This report presents the methods used to establish the high-resolution global positioning system (GPS) control network required for this effort as well as the conventional surveying techniques used in the study. Using simultaneous, dual-frequency GPS vector-based methods, the network points were determined to have positioning accuracies of less than 0.03 meters (m) and ellipsoidal height accuracies of between 0.01 and 0.10 m at a 95-percent degree of confidence. We also assessed network point quality with repeated, electronic (optical) total-station observations at 39 points for a total of 362 measurements; the mean range was 0.022 m in horizontal and 0.13 in vertical at a 95-percent confidence interval. These results indicate that the control network is of sufficient spatial and vertical accuracy for collection of airborne and subaerial remote-sensing technologies and integration of these data in a geographic information system on a repeatable basis without anomalies. The monitoring methods were employed in up to 11 discrete reaches over various time intervals. The reaches varied from 1.3 to 6.4 kilometers in length. Field results from surveys in 2000, 2002, and 2004 are described, during which conventional surveying was used to collect more than 3000 points per day. Ground points were used as checkpoints and to supplement areas just below or above the water surface, where remote-sensing data are not collected or are subject to greater error. An accuracy of +or- 0.05 m was identified as the minimum precision of individual ground points. These results are important for assessing digital elevation model (DEM) quality and identifying detection limits of significant change among surfaces generated from remote-sensing technologies.
The Salton Sea is critically important for wintering and breeding waterbirds, but faces an uncertain future due to water delivery reductions imposed by the Interstate and Federal Quantification Settlement Agreement of 2003. The current preferred alternative for wetland restoration at the Salton Sea is saline habitat impoundments created to mitigate the anticipated loss of wetland habitat. In 2006, a 50-hectare experimental complex that consisted of four inter-connected, shallow water saline habitat ponds (SHP) was constructed at the southeastern shoreline of the Salton Sea and flooded with blended waters from the Alamo River and Salton Sea. The present study evaluated ecological risks and benefits of the SHP concept prior to widespread restoration actions. This study was designed to evaluate (1) baseline chemical, nutrient, and contaminant measures from physical and biological constituents, (2) aquatic invertebrate community structure and colonization patterns, and (3) productivity of and contaminant risks to nesting waterbirds at the SHP. These factors were evaluated and compared with those of nearby waterbird habitat, that is, reference sites.
Topock Marsh is a 1,637-hectare (4,045-acre) wetland adjacent to the Colorado River near Needles, California, and a main feature of Havasu National Wildlife Refuge (NWR). The U.S. Fish and Wildlife Service, in cooperation with the Bureau of Reclamation, began construction of an infrastructure improvement project in 2010 to increase the efficiency of water use and to help protect the habitats and species found within the Havasu NWR. During construction, normal water delivery from the Colorado River into Topock Marsh through the Inlet Canal was restricted, which resulted in unusually low water elevations in 2011. The U.S. Geological Survey, commissioned by the U.S. Fish and Wildlife Service, undertook the investigation of the water quality and aquatic flora and fauna during the low water conditions. Subsequently, water elevations in the marsh returned to more normal elevations after the new concrete-lined Fire Break Canal became fully operational in January 2012. The U.S. Geological Survey made 11 field trips to the Havasu NWR between July 2011 and October 2014 to assess the effects of the temporary low water conditions and the change of inflow location (from the Inlet Canal to the Fire Break Canal) on water quality and aquatic habitat. The following conditions were monitored: water quality, sediment and plant chemistry, phytoplankton, zooplankton, aquatic macro-invertebrates, and emergent and submerged aquatic vegetation (SAV). Water-quality and biota data collected during 2013–14 were then compared with data collected during the 2011–12 low water period. Once the new Fire Break Canal became operational and Colorado River water flowed regularly into the marsh, concentrations of several water quality parameters decreased (for example, specific conductance, total dissolved solids, turbidity, chlorophyll a , and total and organic nitrogen), and phytoplankton abundance was reduced at the upstream sampling stations (TP-3, TP-2, and TP-6); the water flow pushed water with higher concentrations of these components downstream (measured at TP-8). The upstream sampling locations in 2013–14 had decreased turbidity, therefore more SAV biomass accumulated, especially in shallow areas with water depths of ≤1.0 meter (≤3.3 feet). However, the furthest downstream station had higher turbidity caused by both the suspension of autochthonous sediment and high phytoplankton density and biovolume. This higher turbidity resulted in minimal SAV growth, especially in the deeper water (>1.0 meter [>3.3 feet]). Emergent vegetation not only survived the low water conditions of 2011, but expanded its areal coverage and subsequently thrived in the higher water elevations. Overall, no immediate critically negative consequences were detected for aquatic fauna or flora that could be attributd unequivocally to the effect of low water levels. Concentrations of nutrient and trace elements in all water samples were below wildlife toxicity thresholds as established by Arizona Department of Environmental Quality. Three nonnative species were discovered shortly after the Fire Break Canal went into operation. Of the three, gizzard shad ( Dorosoma cepedianum ) and Eurasian watermilfoil ( Myriophyllum spicatum ) increased substantially in numbers from 2011–14, but quagga mussels ( Dreissena bugensis ) did not increase. Future monitoring will determine the long-term impact of the new flow regime
The National Land Cover Database (NLCD) provides thematic land cover and land cover change data at 30-meter spatial resolution for the United States. Although the NLCD is considered to be the leading thematic land cover/land use product and overall classification accuracy across the NLCD is high, performance and consistency in the vast shrub and grasslands of the Western United States is lower than desired. To address these issues and fulfill the needs of stakeholders requiring more accurate rangeland data, the USGS has developed a method to quantify these areas in terms of the continuous cover of several cover components. These components include the cover of shrub, sagebrush ( Artemisia spp), big sagebrush ( Artemisia tridentata spp.), herbaceous, annual herbaceous, litter, and bare ground, and shrub and sagebrush height. To produce maps of component cover, we collected field data that were then associated with spectral values in WorldView-2 and Landsat imagery using regression tree models. The current report outlines the procedures and results of converting these continuous cover components to three thematic NLCD classes: barren, shrubland, and grassland. To accomplish this, we developed a series of indices and conditional models using continuous cover of shrub, bare ground, herbaceous, and litter as inputs. The continuous cover data are currently available for two large regions in the Western United States. Accuracy of the “cross-walked” product was assessed relative to that of NLCD 2011 at independent validation points ( n =787) across these two regions. Overall thematic accuracy of the “cross-walked” product was 0.70, compared to 0.63 for NLCD 2011. The kappa value was considerably higher for the “cross-walked” product at 0.41 compared to 0.28 for NLCD 2011. Accuracy was also evaluated relative to the values of training points ( n =75,000) used in the development of the continuous cover components. Again, the “cross-walked” product outperformed NLCD 2011, with an overall accuracy of 0.81, compared to 0.66 for NLCD 2011. These results demonstrated that our continuous cover predictions and models were successful in increasing thematic classification accuracy in Western United States shrublands. We plan to directly use the “cross-walked” product, where available, in the NLCD 2016 product.
Water samples were collected in the San Francisco Bay estuary during 22 cruises from January through December 1993. Conductivity, temperature, light attenuation, turbidity, oxygen, and in-vivo fluorescence were measured 1ongitudinally and vertically in the main channel of the estuary from south of the Dumbarton Bridge in the southern part of the bay to Rio Vista on the Sacramento River. Discrete water samples were analyzed for chlorophyll a, phaeopigments, suspended particulate matter, and dissolved oxygen. Water density was calculated from values for salinity, temperature, and pressure (depth), and is included in the data summaries. Photosynthetic parameters, water column respiration, and phytoplankton species abundance and cell volume were determined at selected stations every other month.
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