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Large reservoirs: Chapter 17

Large impoundments, defined as those with surface area of 200 ha or greater, are relatively new aquatic ecosystems in the global landscape. They represent important economic and environmental resources that provide benefits such as flood control, hydropower generation, navigation, water supply, commercial and recreational fisheries, and various other recreational and esthetic values. Construction of large impoundments was initially driven by economic needs, and ecological consequences received little consideration. However, in recent decades environmental issues have come to the forefront. In the closing decades of the 20th century societal values began to shift, especially in the developed world. Society is no longer willing to accept environmental damage as an inevitable consequence of human development, and it is now recognized that continued environmental degradation is unsustainable. Consequently, construction of large reservoirs has virtually stopped in North America. Nevertheless, in other parts of the world construction of large reservoirs continues. The emergence of systematic reservoir management in the early 20th century was guided by concepts developed for natural lakes (Miranda 1996). However, we now recognize that reservoirs are different and that reservoirs are not independent aquatic systems inasmuch as they are connected to upstream rivers and streams, the downstream river, other reservoirs in the basin, and the watershed. Reservoir systems exhibit longitudinal patterns both within and among reservoirs. Reservoirs are typically arranged sequentially as elements of an interacting network, filter water collected throughout their watersheds, and form a mosaic of predictable patterns. Traditional approaches to fisheries management such as stocking, regulating harvest, and in-lake habitat management do not always produce desired effects in reservoirs. As a result, managers may expend resources with little benefit to either fish or fishing. Some locally expressed effects, such as turbidity and water quality, zooplankton density and size composition, or fish growth rates and assemblage composition, are the upshot of large-scale factors operating outside reservoirs and not under the direct control of reservoir managers. Realistically, abiotic and biotic conditions in reservoirs are shaped by factors working inside and outside reservoirs, with the relative importance of external factors differing among reservoirs. With this perspective, large reservoirs are viewed from a habitat standpoint within the framework of a conceptual model in which individual reservoir characteristics are influenced by both local- and landscape-scale factors (Figure 17.1). In the sections that follow, how each element of this hierarchical model influences habitat and fish assemblages in reservoirs is considered. Important in-reservoir habitat issues and reservoirs as part of larger systems, where reservoir management requires looking for real solutions outside individual reservoirs are described.

Book chapter↗

Base of principal aquifer for parts of the North Platte, South Platte, and Twin Platte Natural Resources Districts, western Nebraska

Water resources in the North and South Platte River valleys of Nebraska, including the valley of Lodgepole Creek, are critical to the social and economic health of the area, and for the recovery of threatened and endangered species in the Platte River Basin. Groundwater and surface water are heavily used resources, and uses are regulated in the study area. Irrigation is the dominant water use and, in most instances, is supplied by both groundwater and surface-water sources. The U.S. Geological Survey and its partners have collaborated to use airborne geophysical surveys for areas of the North and South Platte River valleys including the valley of Lodgepole Creek in western Nebraska. The objective of the surveys was to map the aquifers and underlying bedrock topography of selected areas to help improve the understanding of groundwater–surface-water relations to guide water-management decisions. This project was a cooperative study involving the North Platte Natural Resources District, the South Platte Natural Resources District, the Twin Platte Natural Resources District, the Conservation and Survey Division of the University of Nebraska-Lincoln, and the Nebraska Environmental Trust. This report presents the interpreted base-of-aquifer surface for part of the area consisting of the North Platte Natural Resources District, the South Platte Natural Resources District, and the Twin Platte Natural Resources District. The interpretations presented herein build on work done by previous researchers from 2008 to 2009 by incorporating additional airborne electromagnetic survey data collected in 2010 and additional test holes from separate, related studies. To make the airborne electromagnetic data useful, numerical inversion was used to convert the measured data into a depth-dependent subsurface resistivity model. An interpretation of the elevation and configuration of the base of aquifer was completed in a geographic information system that provided x, y, and z coordinates. The process of interpretation involved manually picking locations (base-of-aquifer elevations) on the displayed airborne electromagnetic-derived resistivity profile by the project geophysicist, hydrologist, and geologist. These locations, or picks, of the base-of-aquifer elevation (typically the top of the Brule Formation of the White River Group) were then stored in a georeferenced database. The pick was made by comparing the inverted airborne electromagnetic-derived resistivity profile to the lithologic descriptions and borehole geophysical logs from nearby test holes. The database of interpretive picks of the base-of-aquifer elevation was used to create primary input for interpolating the new base-of-aquifer contours. The automatically generated contours were manually adjusted based on the interpreted location of paleovalleys eroded into the base-of-aquifer surface and associated bedrock highs, many of which were unmapped before this study. When contours are overlain by the water-table surface, the saturated thickness of the aquifer can be computed, which allows an estimate of total water in storage. The contours of the base-of-aquifer surface presented in this report may be used as the lower boundary layer in existing and future groundwater-flow models. The integration of geophysical data into the contouring process facilitated a more continuous and spatially comprehensive view of the hydrogeologic framework.

Nebraska↗

Assessment of water quality, benthic invertebrates, and periphyton in the Threemile Creek basin, Mobile, Alabama, 1999-2003

The U.S. Geological Survey conducted a 4-year investigation of water quality and aquatic-community structure in Threemile Creek, an urban stream that drains residential areas in Mobile, Alabama. Water-quality samples were collected between March 2000 and September 2003 at four sites on Threemile Creek, and between March 2000 and October 2001 at two tributary sites that drain heavily urbanized areas in the watershed. Stream samples were analyzed for major ions, nutrients, fecal-indicator bacteria, and selected organic wastewater compounds. Continuous measurements of dissolved-oxygen concentrations, water temperature, specific conductance, and turbidity were recorded at three sites on Threemile Creek during 1999?2003. Aquatic-community structure was evaluated by conducting one survey of the benthic invertebrate community and multiple surveys of the algal community (periphyton). Benthic invertebrate samples were collected in July 2000 at four sites on Threemile Creek; periphyton samples were collected at four sites on Threemile Creek and the two tributary sites during 2000 ?2003. The occurrence and distribution of chemical constituents in the water column provided an initial assessment of water quality in the streams; the structure of the benthic invertebrate and algal communities provided an indication of the cumulative effects of water quality on the aquatic biota. Information contained in this report can be used by planners and resource managers in the evaluation of proposed total maximum daily loads and other restoration efforts that may be implemented on Threemile Creek. The three most upstream sites on Threemile Creek had similar water chemistry, characterized by a strong calcium-bicarbonate component; the most downstream site on Threemile Creek was affected by tidal fluctuations and mixing from Mobile Bay and had a strong sodium-chloride component. The water chemistry at the tributary site on Center Street was characterized by a strong sodium-chloride component; the water chemistry at the second tributary site, Toulmins Spring Branch, was characterized by a strong calcium component without a dominant anionic species. The ratios of sodium to chloride at the tributary at Center Street were higher than typical values for seawater, indicating that sources other than seawater (such as leaking or overflowing sewer systems or industrial discharge) likely are contributors to the increased levels of sodium and chloride. Concentrations of fluoride and boron also were elevated at this site, indicating possible anthropogenic sources. Dissolved-oxygen concentrations were not always within levels established by the Alabama Department of Environmental Management; continuous monitors recorded dissolved-oxygen concentrations that were repeatedly less than the minimum criterion (3.0 milligrams per liter) at the most downstream site on Threemile Creek. Water temperature exceeded the recommended criterion (32.2 degrees Celsius) at five of six sites in the Threemile Creek basin. The pH values were within established criteria (6.0 ? 8.5) at sites on Threemile Creek; however, pH values ranged from 7.2 to 10.0 at the tributary at Center Street and from 6.6 to 9.9 at Toulmins Spring Branch. Nutrient concentrations in the Threemile Creek basin reflect the influences of both land use and the complex hydrologic systems in the lower part of the basin. Nitrite-plus-nitrate concentrations exceeded U.S. Environmental Protection Agency ecoregion nutrient criteria in 88 percent of the samples. In 45 percent of the samples, total phosphorus concentrations exceeded the U.S. Environmental Protection Agency goal of 0.1 milligram per liter for preventing nuisance aquatic growth. Ratios of nitrogen to phosphorus indicate that both nutrients have limiting effects. Median concentrations of enterococci and fecal coliform bacteria were highest at the two tributary sites and lowest at the most upstream site on Threemile Creek. In general, concentrations o

Scientific Investigations Report↗

Connecting onshore and offshore near-surface geology: Delaware's sand inventory project

Beginning in 1988, the Delaware Geological Survey began a program to inventory on-land sand resources suitable for beach nourishment. The inventory included an assessment of the native beach textures using existing data and developing parameters of what would be considered suitable sand textures for Delaware's Atlantic beaches. An assessment of the economics of on-land sand resources was also conducted, and it was determined that the cost of the sand was competitive with offshore dredging costs. In addition, the sand resources were put into a geologic context for purposes of predicting which depositional environments and lithostratigraphic units were most likely to produce suitable sand resources. The results of the work identified several suitable on-land sand resource areas in the Omar and Beaverdam formations that were deposited in barrier-tidal delta and fluvial-estuarine environments, respectively. The identified on-land resources areas have not been utilized due to difficulties of truck transport and development pressures in the resource areas. The Delaware Geological Survey's participation in years 8, 9, and 10 of the Continental Margins Program was developed to extend the known resource areas onshore to offshore Delaware in order to determine potential offshore sand resources for beach nourishment. Years 8 and 9 involved primarily the collection of all available data on the offshore geology. These data included all seismic lines, surface grab samples, and cores. The data were filtered for those that had reliable locations and geologic information that could be used for geologic investigations. Year 10 completed the investigations onshore by construction of a geologic cross-section from data along the coast of Delaware from Cape Henlopen to Fenwick. This cross section identified the geologic units and potential sand resource bodies as found immediately along the coast. These units and resources are currently being extended offshore and tied to known and potential sand resources as part of the continuing cooperative effort between the Delaware Geological Survey and the Minerals Management Service's INTERMAR office as sand resources are identified in federal waters off Delaware. Offshore sand resources are found in the Pliocene Beaverdam Formation offshore where overlying Quaternary units have been stripped, in the tidal delta complexes of several Quaternary units likely equivalent to the onshore Omar Formation, and in late Pleistocene- and Holocene-age shoal complexes. Onshore lithostratigraphic units can be traced offshore and show another reason for continued geologic mapping both onshore and offshore.The Delaware Geological Survey's participation in years 8, 9, and 10 of the Continental Margins Program was developed to extend the known resource areas onshore to offshore Delaware in order to determine potential offshore sand resources for beach nourishment. Years 8 and 9 involved primarily the collection of all available data on the offshore geology. These data included all seismic lines, surface grab samples, and cores. The data were filtered for those that had reliable locations and geologic information that could be used for geologic investigations. Year 10 completed the investigations onshore by construction of a geologic cross-section from data along the coast of Delaware from cape Henlopen to Fenwick.

Marine Georesources and Geotechnology↗

Mapping the seafloor geology offshore of Massachusetts

Geologic and bathymetric maps help us understand the evolutionary history of the Massachusetts coast and the processes that have shaped it. The maps show the distribution of bottom types (for example, bedrock, gravel, sand, mud) and water depths over large areas of the seafloor. In turn, these two fundamental parameters largely determine the species of flora and fauna that inhabit a particular area. Knowledge of bottom types and water depths provides a framework for mapping benthic habitats and managing marine resources. The need for coastal–zone mapping to inform policy and management is widely recognized as critical for mitigating hazards, creating resource inventories, and tracking environmental changes (National Research Council, 2004; U.S. Commission on Ocean Policy, 2004).

Massachusetts↗

The 3D Elevation Program: summary for New York

Elevation data are essential to a broad range of applications, including forest resources management, wildlife and habitat management, national security, recreation, and many others. For the State of New York, elevation data are critical for coastal zone management, natural resources conservation, agriculture and precision farming, flood risk management, infrastructure and construction management, water supply and quality, and other business uses. Today, high-density light detection and ranging (lidar) data are the primary sources for deriving elevation models and other datasets. Federal, State, Tribal, and local agencies work in partnership to (1) replace data that are older and of lower quality and (2) provide coverage where publicly accessible data do not exist. A joint goal of State and Federal partners is to acquire consistent, statewide coverage to support existing and emerging applications enabled by lidar data. The National Enhanced Elevation Assessment evaluated multiple elevation data acquisition options to determine the optimal data quality and data replacement cycle relative to cost to meet the identified requirements of the user community. The evaluation demonstrated that lidar acquisition at quality level 2 for the conterminous United States and quality level 5 ifsar data for Alaska with a 6- to 10-year acquisition cycle provided the highest benefit/cost ratios. The 3D Elevation Program (3DEP) initiative selected an 8-year acquisition cycle for the respective quality levels. 3DEP, managed by the U.S. Geological Survey (USGS), the Office of Management and Budget Circular A–16 lead agency for terrestrial elevation data, responds to the growing need for high-quality topographic data and a wide range of other 3D representations of the Nation’s natural and constructed features.

New York↗

The 3D Elevation Program—Supporting Utah’s economy

Introduction High-quality elevation data for Utah inform decision making to improve the State’s economy. Light detection and ranging (lidar) data are used to support infrastructure planning and management, assess natural resources, and improve resiliency to hazards. The expanding availability of current and more accurate lidar data helps to better support natural resource conservation, wildfire risk management, geologic hazard investigation and mitigation, flood risk management, water supply planning, and urban planning and development. Critical applications that meet the State’s management needs depend on lidar data that provide a highly detailed three-dimensional (3D) model of the Earth’s surface and aboveground features. The 3D Elevation Program is managed by the U.S. Geological Survey in partnership with Federal, State, Tribal, U.S. territorial, and local agencies to acquire consistent lidar coverage at quality level 2 or better to meet the many needs of the Nation and Utah. The status of available and in-progress 3DEP baseline lidar data in Utah is shown in figure 1. 3DEP baseline lidar data include quality level 2 or better, 1-meter or better digital elevation models, and lidar point clouds, and must meet the Lidar Base Specification version 1.2 ( https://www.usgs.gov/3dep/lidarspec ) or newer requirements. The National Enhanced Elevation Assessment identified user requirements and conservatively estimated that availability of lidar data would result in at least $8.70 million in new benefits annually to the State. The top 10 Utah business uses for 3D elevation data, which are based on the estimated annual conservative benefits of 3DEP, are shown in table 2.

Utah↗

Coastal circulation and water-column properties off Kalaupapa National Historical Park, Molokai, Hawaii, 2008-2010

More than 2.2 million measurements of oceanographic forcing and the resulting water-column properties were made off U.S. National Park Service's Kalaupapa National Historical Park on the north shore of Molokai, Hawaii, between 2008 and 2010 to understand the role of oceanographic processes on the health and sustainability of the area's marine resources. The tides off the Kalaupapa Peninsula are mixed semidiurnal. The wave climate is dominated by two end-members: large northwest Pacific winter swell that directly impacts the study site, and smaller, shorter-period northeast trade-wind waves that have to refract around the peninsula, resulting in a more northerly direction before propagating over the study site. The currents primarily are alongshore and are faster at the surface than close to the seabed; large wave events, however, tend to drive flow in a more cross-shore orientation. The tidal currents flood to the north and ebb to the south. The waters off the peninsula appear to be a mix of cooler, more saline, deeper oceanic waters and shallow, warmer, lower-salinity nearshore waters, with intermittent injections of freshwater, generally during the winters. Overall, the turbidity levels were low, except during large wave events. The low overall turbidity levels and rapid return to pre-event background levels following the cessation of forcing suggest that there is little fine-grained material. Large wave events likely inhibit the settlement of fine-grained sediment at the site. A number of phenomena were observed that indicate the complexity of coastal circulation and water-column properties in the area and may help scientists and resource managers to better understand the implications of the processes on marine ecosystem health.

Hawai'i↗

Construction, calibration, and validation of the RBM10 water temperature model for the Trinity River, northern California

We constructed a one-dimensional daily averaged water-temperature model to simulate Trinity River temperatures for 1980–2013. The purpose of this model is to assess effects of water-management actions on water temperature and to provide water temperature inputs for a salmon population dynamics model. Simulated meteorological data, observed streamflow data, and observed water temperatures were used as model inputs to simulate a continuous 34-year time series of historical daily mean water temperature at eight locations along 112.2 river miles from Lewiston Dam near Weaverville, California, downstream to the Klamath River confluence. To demonstrate the utility of the model to inform management actions, we simulated three management alternatives to assess the effects of bypass flow augmentation in a drought year, 1994, and compared those results to the simulated historical baseline, referred to as the “No Action” alternative scenario. Augmentation flows from the Lewiston Dam bypass consist of temperature-controlled releases capable of cooling downstream water temperatures in hot times of the year, which can reduce the probability of disease outbreaks in fish populations. Outputs from the Trinity River water-temperature model were then used as inputs to an existing water-temperature model of the Klamath River to evaluate the effect of augmentation flow releases on water temperatures in the lower Klamath River. We structured the Trinity River water-temperature model in River Basin Model-10 (RBM10), which uses a simple equilibrium flow model, assuming discharge in each river segment on each day is transmitted downstream instantaneously. The model uses a heat-budget formulation to quantify heat flux at the air-water interface. Inputs for the heat budget are calculated from daily mean meteorological data, including net shortwave solar radiation, net longwave atmospheric radiation, air temperature, wind speed, vapor pressure, and a psychrometric constant needed to calculate the Bowen ratio. The modeling domain was divided into eight reaches ranging in length from 8.8 to 20.6 miles, which were calibrated and validated separately with observed water temperature data collected irregularly from 1980 to 2013. Root mean square errors of observed and simulated water temperatures for the eight reaches ranged from 0.25 to 1.12 degrees Celsius (°C). Mean absolute errors ranged from 0.18 to 0.89 °C. For model validation, a k -fold cross-validation technique was used. Validation root mean square error and mean absolute error for the eight reaches ranged from 0.24 to 1.11 °C and from 0.18 to 0.89 °C, respectively. Augmentation scenarios were based on historical hydrological and meteorological data, combined with prescribed flow and temperature releases from Lewiston Dam provided by the Bureau of Reclamation. Water releases were scheduled to achieve targeted flows of 2,500, 2,800, and 3,200 cubic feet per second in the lower Klamath River from mid-August through late September, coinciding with the upstream migration of adult fall-run Chinook salmon ( Oncorhynchus tshawytscha ). Water temperatures simulated at river mile 5.7 on the Klamath River showed a 5 °C decrease from the No Action historical baseline, which was near or greater than 23 °C when augmentation began in mid-August. Thereafter, an approximate 1 °C difference among augmentation scenarios emerged, with the decrease in water temperature commensurate to the level of augmentation. All augmentation scenarios simulated water temperatures equal to or less than 21 °C from mid-August through late September. Water temperatures equal to or greater than 23 °C are of particular interest because of a thermal threshold known to inhibit upstream migration of salmon. When temperatures exceed this approximate 23 °C threshold, Chinook salmon are known to congregate in high densities in thermal refugias and show extended residence times, which can potentially trigger epizootic outbreaks such as of Ichthyophthirius multifiliis (“Ich”) and Flavobacterium columnare (“Columnaris”) that were the causative factors of the Klamath River fish kill in 2002. A model with the ability to simulate water temperatures in response to management actions at the basin scale is a valuable asset for water managers who must make decisions about how best to use limited water resources, which directly affect the state of fisheries in the Klamath Basin.

California↗

Tennessee

The U.S. Geological Survey (USGS), established in 1879, is an agency of the U.S. Department of the Interior. For more than a century, the USGS has provided reports, maps, data, and other information to aid in the development, management, and portection of the Nation's water, energy, mineral, and land resources. This brochure outlines the USGS in Tennessee and highlights hydrologic investigations.

Tennessee↗

Status of groundwater levels and storage volume in the Equus Beds aquifer near Wichita, Kansas, January 2016

The Equus Beds aquifer in south-central Kansas, which is part of the High Plains aquifer, serves as a source of water for municipal and agricultural users in the area. The city of Wichita has used the Equus Beds aquifer as one of its primary water sources since the 1940s. The aquifer in and around Wichita’s well field reached historically low water levels in 1993, prompting the city to adopt new water-use and conservation strategies to ensure future water supply needs were met. Part of the plan was to initiate a managed aquifer recharge program called the Equus Beds Aquifer Storage and Recovery project. The goal of the managed aquifer recharge program is to artificially recharge the Equus Beds aquifer with treated water from the Little Arkansas River. As part of the Equus Beds Aquifer Storage and Recovery project, the city of Wichita and the U.S. Geological Survey have partnered in a long-term cooperative study to monitor and describe the quantity and quality of the water in the Equus Beds aquifer and the Little Arkansas River. The city of Wichita, the Equus Beds Groundwater Management District No. 2, the Kansas Department of Agriculture–Division of Water Resources, and the U.S. Geological Survey collected groundwater levels in numerous wells screened in the Equus Beds aquifer in the area in and around Wichita’s well field in January 2016. The measurements were used to interpolate potentiometric surfaces for shallow and deep parts of the aquifer in the study area. These potentiometric surfaces were compared with potentiometric surfaces from previous years to estimate changes in water levels and storage volume in the study area. Groundwater levels were generally higher in January 2016 than they were in January 2015. On average, in January 2016, groundwater levels in the shallow part of the aquifer were about 3.4 feet higher and groundwater levels in the deep part of the aquifer were about 3.8 feet higher than in January 2015. The volume of water stored in the study area decreased by about 74,000 acre-feet between predevelopment (the time period before substantial pumpage began in the 1940s) and January 2016; increased by about 121,000 acre-feet between the historic low in 1993 and January 2016; and increased by about 61,000 acre-feet between January 2015 and January 2016. About 62 percent of the storage volume lost between predevelopment and 1993 has been recovered. The increase in storage volume from January 2015 to January 2016 can probably be attributed to less pumping by the city of Wichita and irrigators, more recharge due to higher-than-average precipitation, and higher volumes of artificial recharge in 2015.

Kansas↗

Nutrient and metal loads estimated by using discrete, automated, and continuous water-quality monitoring techniques for the Blackstone River at the Massachusetts-Rhode Island State line, water years 2013–14

Flow-proportional composite water samples were collected in water years 2013 and 2014 by the U.S. Geological Survey, in cooperation with the Massachusetts Department of Environmental Protection, from the Blackstone River at Millville, Massachusetts (U.S. Geological Survey station 01111230), about 0.5 mile from the border with Rhode Island. Samples were collected in order to better understand the dynamics of selected nutrient and metal constituents, assist with planning, guide activities to meet water-quality goals, and provide real-time water-quality information to the public. An automated system collected the samples at 14-day intervals to determine total and dissolved nitrogen and phosphorus concentrations, to provide accurate monthly nutrient concentration data, and to calculate monthly load estimates. Concentrations of dissolved trace metals and total aluminum were determined from 4-day composite water samples that were collected twice monthly by the automated system. Results from 4-day composites provide stakeholders with information to evaluate trace metals on the basis of chronic 4-day exposure criteria for aquatic life, and the potential to use the biotic ligand model to evaluate copper concentrations. Nutrient, trace metal, suspended sediment, dissolved organic carbon, and chlorophyll a concentrations were determined from discrete samples collected at the Millville station and from across the stream transect at the upstream railroad bridge, and these concentrations served as a means to evaluate the representativeness of the Millville point location. Analytical results from samples collected with the automated flow-proportional sampling system provided the means to calculate monthly and annual loading data. Total nitrogen and total phosphorus loads in water year (WY) 2013 were about 447,000 and 36,000 kilograms (kg), respectively. In WY 2014, annual loads of total nitrogen and total phosphorus were about 342,000 and 21,000 kg, respectively. Total nitrogen and total phosphorus loads from WYs 2013 and 2014 were about 56 and 65 percent lower than those reported for WYs 2008 and 2009. The higher loads in 2008 and 2009 may be explained by the higher than average flows in WY 2009 and by facility upgrades made by wastewater treatment facilities in the basin. Median loads were determined from composite samples collected with the automated system between October 2012 and October 2014. Median dissolved cadmium and chromium 4-day loads were 0.55 and 0.84 kg, respectively. Dissolved copper and total lead median 4-day loads were 8.02 and 1.42 kg, respectively. The dissolved nickel median 4-day load was 5.45 kg, and the dissolved zinc median 4-day load was 36 kg. Median total aluminum 4-day loads were about 197 kg. Spearman’s rank correlation analyses were used with discrete sample concentrations and continuous records of temperature, specific conductance, turbidity, and chlorophyll a to identify correlations between variables that could be used to develop regression equations for estimating real-time concentrations of constituents. Correlation coefficients were generated for flow, precipitation, antecedent precipitation, physical parameters, and chemical constituents. A 95-percent confidence limit for each value of Spearman’s rho was calculated, and multiple linear regression analysis using ordinary least squares regression techniques was used to develop regression equations for concentrations of total phosphorus, total nitrogen, suspended sediment concentration, total copper, and total aluminum. Although the correlations are based on the limited amount of data collected as part of this study, the potential to monitor water-quality changes in real time may be of value to resource managers and decision makers.

Massachusetts, Rhode Island↗

Acidification in the U.S. Southeast: Causes, potential consequences and the role of the Southeast Ocean and Coastal Acidification Network

Coastal acidification in southeastern U.S. estuaries and coastal waters is influenced by biological activity, run-off from the land, and increasing carbon dioxide in the atmosphere. Acidification can negatively impact coastal resources such as shellfish, finfish, and coral reefs, and the communities that rely on them. Organismal responses for species located in the U.S. Southeast document large negative impacts of acidification, especially in larval stages. For example, the toxicity of pesticides increases under acidified conditions and the combination of acidification and low oxygen has profoundly negative influences on genes regulating oxygen consumption. In corals, the rate of calcification decreases with acidification and processes such as wound recovery, reproduction, and recruitment are negatively impacted. Minimizing the changes in global ocean chemistry will ultimately depend on the reduction of carbon dioxide emissions, but adaptation to these changes and mitigation of the local stressors that exacerbate global acidification can be addressed locally. The evolution of our knowledge of acidification, from basic understanding of the problem to the emergence of applied research and monitoring, has been facilitated by the development of regional Coastal Acidification Networks (CANs) across the United States. This synthesis is a product of the Southeast Coastal and Ocean Acidification Network (SOCAN). SOCAN was established to better understand acidification in the coastal waters of the U.S. Southeast and to foster communication among scientists, resource managers, businesses, and governments in the region. Here we review acidification issues in the U.S. Southeast, including the regional mechanisms of acidification and their potential impacts on biological resources and coastal communities. We recommend research and monitoring priorities and discuss the role SOCAN has in advancing acidification research and mitigation of and adaptation to these changes.

Florida, Georgia, North Carolina, South Carolina↗

Gaps in water quality modeling of hydrologic systems

This review assesses gaps in water quality modeling, emphasizing opportunities to improve next-generation models that are essential for managing water quality and are integral to meeting goals of scientific and management agencies. In particular, this paper identifies gaps in water quality modeling capabilities that, if addressed, could support assessments, projections, and evaluations of management alternatives to support ecosystem health and human beneficial use of water resources. It covers surface water and groundwater quality modeling, dealing with a broad suite of physical, biogeochemical, and anthropogenic drivers. Modeling capabilities for six constituents (or constituent categories) are explored: water temperature, salinity, nutrients, sediment, geogenic constituents, and contaminants of emerging concern. Each constituent was followed through the coupled atmospheric-hydrologic-human system, with prominent modeling gaps described for a diverse array of relevant inputs, processes, and human activities. Commonly identified modeling gaps primarily fall under three types: (1) model gaps, (2) data gaps, and (3) process understanding gaps. In addition to potential solutions for addressing specific individual modeling limitations, some broad approaches (e.g., enhanced data collection and compilation, machine learning, reduced-complexity modeling) are discussed as ways forward for tackling multiple gaps. This gap analysis establishes a framework of diverse approaches that may support improved process representation, scale, and accuracy of models for a wide range of water quality issues.

Water↗

Effects of model layer simplification using composite hydraulic properties

Groundwater provides much of the fresh drinking water to more than 1.5 billion people in the world (Clarke et al., 1996) and in the United States more that 50 percent of citizens rely on groundwater for drinking water (Solley et al., 1998). As aquifer systems are developed for water supply, the hydrologic system is changed. Water pumped from the aquifer system initially can come from some combination of inducing more recharge, water permanently removed from storage, and decreased groundwater discharge. Once a new equilibrium is achieved, all of the pumpage must come from induced recharge and decreased discharge (Alley et al., 1999). Further development of groundwater resources may result in reductions of surface water runoff and base flows. Competing demands for groundwater resources require good management. Adequate data to characterize the aquifers and confining units of the system, like hydrologic boundaries, groundwater levels, streamflow, and groundwater pumping and climatic data for recharge estimation are to be collected in order to quantify the effects of groundwater withdrawals on wetlands, streams, and lakes. Once collected, three-dimensional (3D) groundwater flow models can be developed and calibrated and used as a tool for groundwater management. The main hydraulic parameters that comprise a regional or subregional model of an aquifer system are the hydraulic conductivity and storage properties of the aquifers and confining units (hydrogeologic units) that confine the system. Many 3D groundwater flow models used to help assess groundwater/surface-water interactions require calculating ?effective? or composite hydraulic properties of multilayered lithologic units within a hydrogeologic unit. The calculation of composite hydraulic properties stems from the need to characterize groundwater flow using coarse model layering in order to reduce simulation times while still representing the flow through the system accurately. The accuracy of flow models with simplified layering and hydraulic properties will depend on the effectiveness of the methods used to determine composite hydraulic properties from a number of lithologic units.

Florida↗

The transboundary non-renewable Nubian Aquifer System of Chad, Egypt, Libya and Sudan: Classical groundwater questions and parsimonious hydrogeologic analysis and modeling

Parsimonious groundwater modeling provides insight into hydrogeologic functioning of the Nubian Aquifer System (NAS), the world’s largest non-renewable groundwater system (belonging to Chad, Egypt, Libya, and Sudan). Classical groundwater-resource issues exist (magnitude and lateral extent of drawdown near pumping centers) with joint international management questions regarding transboundary drawdown. Much of NAS is thick, containing a large volume of high-quality groundwater, but receives insignificant recharge, so water-resource availability is time-limited. Informative aquifer data are lacking regarding large-scale response, providing only local-scale information near pumps. Proxy data provide primary underpinning for understanding regional response: Holocene water-table decline from the previous pluvial period, after thousands of years, results in current oasis/sabkha locations where the water table still intersects the ground. Depletion is found to be controlled by two regional parameters, hydraulic diffusivity and vertical anisotropy of permeability. Secondary data that provide insight are drawdowns near pumps and isotope-groundwater ages (million-year-old groundwaters in Egypt). The resultant strong simply structured three-dimensional model representation captures the essence of NAS regional groundwater-flow behavior. Model forecasts inform resource management that transboundary drawdown will likely be minimal—a nonissue—whereas drawdown within pumping centers may become excessive, requiring alternative extraction schemes; correspondingly, significant water-table drawdown may occur in pumping centers co-located with oases, causing oasis loss and environmental impacts.

Hydrogeology Journal↗

Shallow groundwater quality in the Village of Patchogue, Suffolk County, New York

The onsite disposal of wastewater within the Patchogue River Basin-a riverine estuary that discharges into Great South Bay, Suffolk County, Long Island, N.Y. -has adversely affected water quality and aquatic habitats within both the tidal and non-tidal portions of the river. In response to increased development within the approximately 14 square mile basin, the Village of Patchogue has expanded efforts to manage and protect the local groundwater resources, which sustain freshwater base flow and aquatic habitats. Water-quality samples from 10 shallow wells within the Village were collected in March 2009, before the start of seasonal fertilizer application, to document the effects of onsite wastewater disposal on groundwater discharging into the Patchogue River. Each sample was analyzed for physical properties (pH, dissolved oxygen, specific conductance, and temperature), nutrients, organic carbon, major ions, and trace elements. Water samples from eight wells were analyzed for stable isotopes of nitrogen. The nitrate concentration in one well was 40 milligrams per liter (mg/L), which exceeded the U.S. Environmental Protection Agency (USEPA) and New York State Department of Health (NYSDOH) maximum contamination level in drinking water of 10 mg/L. Sodium concentrations at nine wells exceeded the USEPA Drinking Water Advisory Taste Threshold of 60 mg/L. Dissolved iron concentrations at three wells exceeded the NYSDOH and USEPA Secondary Drinking Water Standard of 300 micrograms per liter (?g/L). Nitrogen isotope signatures (d15N) were determined and compared with those reported from previous studies in Nassau and Suffolk Counties to identify possible sources of the nitrate. Local variations in measured ammonia, nitrate, total nitrogen, phosphorus, and organic carbon concentrations and d15N signatures indicate that nitrate enters the surficial aquifer from several sources (fertilizer, septic waste, and animal waste) and reflects biogeochemical processes such as denitrification.

Scientific Investigations Report↗

Propagation and composition of the flood wave on the upper Mississippi River, 1993

During spring and summer 1993, record flooding inundated much of the upper Mississippi River Basin. The magnitude of the damages-in terms of property, disrupted business, and personal trauma was unmatched by any other flood disaster in United States history. Property damage alone is expected to exceed $10 billion. Damaged highways and submerged roads disrupted overland transportation throughout the flooded region. The Mississippi and the Missouri Rivers were closed to navigation before, during, and after the flooding. Millions of acres of productive farmland remained under water for weeks during the growing season. Rills and gullies in many tilled fields are the result of the severe erosion that occurred throughout the Midwestern United States farmbelt. The hydrologic effects of extended rainfall throughout the upper Midwestern United States were severe and widespread. The banks and channels of many rivers were severely eroded, and sediment was deposited over large areas of the basin's flood plain. Record flows submerged many areas that had not been affected by previous floods. Industrial and agricultural areas were inundated, which caused concern about the transport and fate of industrial chemicals, sewage effluent, and agricultural chemicals in the floodwaters. The extent and duration of the flooding caused numerous levees to fail. One failed levee on the Raccoon River in Des Moines, Iowa, led to flooding of the city's water treatment plant. As a result, the city was without drinking water for 19 days. As the Nation's principal water-science agency, the U.S. Geological Survey (USGS) is in a unique position to provide an immediate assessment of some of the hydrological effects of the 1993 flood. The USGS maintains a hydrologic data network and conducts extensive water-resources investigations nationwide. Long-term data from this network and information on local and regional hydrology provide the basis for identifying and documenting the effects of the flooding . During the flood, the USGS provided continuous streamflow and related information to the National Weather Service (NWS), the U.S. Army Corps of Engineers, the Federal Emergency Management Agency (FEMA), and many State and local agencies as part of its role to provide basic information on the Nation's surface- and ground-water resources at thousands of locations across the United States. The NWS has used the data in forecasting floods and issuing flood warnings. The data have been used by the Corps of Engineers to operate water diversions, dams, locks, and levees. The FEMA and many State and local emergency management agencies have used USGS hydrologic data and NWS forecasts as part of the basis of their local flood-response activities. In addition, USGS hydrologists are conducting a series of investigations to document the effects of the flooding and to improve understanding of the related processes. The major initial findings from these studies will be reported in this Circular series as results become available. U.S. Geological Survey Circular 1120, Floods in the Upper Mississippi River Basin, 1993, consists of individually published chapters that will document the effects of the 1993 flooding. The series includes data and findings on the magnitude and frequency of peak discharges; precipitation; water-quality characteristics, including nutrients and man-made contaminants; transport of sediment; assessment of sediment deposited on flood plains; effects of inundation on ground-water quality; flood-discharge volume; effects of reservoir storage on flood peaks; stream-channel scour at selected bridges; extent of floodplain inundation; and documentation of geomorphologic changes.

upper Mississippi River basin↗