USGS Science⌕ Search

SEARCH · USGS Science

Results for “Biological Report”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 1,639 records · Page 91Linked to original sources
USGS2003

Evidence of disease-related amphibian decline in Colorado

The recent discovery of a pathogenic fungus (Batrachochytrium dendrobatidis) associated with declines of frogs in the American and Australian tropics, suggests that at least the proximate cause, may be known for many previously unexplained amphibian declines. We have monitored boreal toads in Colorado since 1991 at four sites using capturea??recapture of adults and counts of egg masses to examine the dynamics of this metapopulation. Numbers of male toads declined in 1996 and 1999 with annual survival rate averaging 78% from 1991 to 1994, 45% in 1995 and 3% between 1998 and 1999. Numbers of egg masses also declined. An etiological diagnosis of chytridiomycosis consistent with infections by the genus Batrachochytrium was made in six wild adult toads. Characteristic histomorphological features (i.e. intracellular location, shape of thalli, presence of discharge tubes and rhizoids) of chytrid organisms, and host tissue response (acanthosis and hyperkeratosis) were observed in individual toads. These characteristics were indistinguishable from previously reported mortality events associated with chytrid fungus. We also observed epizootiological features consistent with mortality events associated with chytrid fungus: an increase in the ratio of female:male toads captured, an apparent spread of mortalities within the metapopulation and mortalities restricted to post metamorphic animals. Eleven years of population data suggest that this metapopulation of toads is in danger of extinction, pathological and epizootiological evidence indicates that B. dendrobatidis has played a proximate role in this process

Colorado↗
USGS2021

Survey of fish assemblages in the upper Neversink River and upper Rondout Creek, New York, 2017–19

Streams in the Catskill Mountains region of New York provide many important ecological and economic services, including recreational angling and serving as a drinking water supply to New York City. Many streams in this region were adversely affected by acid deposition during the late 20th century, impairing water quality and aquatic ecosystems. More recently, the level of acid deposition has declined while changes in climate have become more pronounced. As a result, biological and chemical data are needed to determine the current condition of stream ecosystems in the Catskill Mountains region. The U.S. Geological Survey, in cooperation with the Rondout Neversink Stream Program, surveyed fish communities and water chemistry annually between 2017 and 2019 at 23 sites in the upper Neversink River and upper Rondout Creek watersheds to compile a contemporary baseline dataset and assess potential biological recovery from reduced acidification. The resulting data indicated that brook trout ( Salvelinus fontinalis ) were present at every study site, although slimy sculpin ( Cottus cognatus ) was the most abundant species at most sites. Stream pH ranged from 4.8 to 7.0 across all sites and generally increased from upstream to downstream. Similarly, the number of species present and the ratio of brown trout ( Salmo trutta ) to brook trout increased at sites in each subwatershed from upstream to downstream.

New York↗
USGS2005

Parking lot sealcoat: a major source of polycyclic aromatic hydrocarbons (PAHs) in urban and suburban environments

Collaborative studies by the City of Austin and the U. S. Geological Survey (USGS) have identified coal-tar based sealcoat—the black, shiny emulsion painted or sprayed on asphalt pavement such as parking lots—as a major and previously unrecognized source of polycyclic aromatic hydrocarbon (PAH) contamination. Several PAHs are suspected human carcinogens and are toxic to aquatic life. Studies in Austin, Texas, showed that particles in runoff from coal-tar based sealcoated parking lots had concentrations of PAHs that were about 65 times higher than concentrations in particles washed off parking lots that had not been sealcoated. Biological studies, conducted by the City of Austin in the field and in the laboratory, indicated that PAH levels in sediment contaminated with abraded sealcoat were toxic to aquatic life and were degrading aquatic communities, as indicated by loss of species and decreased numbers of organisms. Identification of this source of PAHs may help to improve future strategies for controlling these compounds in urban water bodies across the Nation where parking lot sealcoat is used.

Fact Sheet↗
USGS2003

Water-quality, bed-sediment, and biological data, for streams in the upper Prickly Pear Creek watershed, Montana, 2001

The upper Prickly Pear Creek watershed encompasses the upstream 15 miles of Prickly Pear Creek, south of Helena, Montana (fig. 1). The headwaters of Prickly Pear Creek and its tributaries (Beavertown Creek, Clancy Creek, Dutchman Creek, Golconda Creek, Lump Gulch, Spring Creek, and Warm Springs Creek) are primarily in the Helena National Forest, whereas the central part of the watershed primarily is within either Bureau of Land Management (BLM) or privately owned property. Three mining districts are present in the upper Prickly Pear Creek watershed: Alhambra, Clancy, and Colorado. Numerous prospects, adits, tailings piles, mills, dredge piles, and mines (mostly inactive) are located throughout the watershed. These districts contain polymetallic (Ag, Au, Cu, Pb, Zn) vein deposits and precious-metal (Au-Ag) vein and disseminated deposits that were exploited beginning in the 1860’s. Placer Au deposits in the major streams were extensively mined in the late 1800’s and early 1900’s. As part of a cooperative effort with Federal land management agencies, the U.S. Geological Survey (USGS) is currently using an integrated approach to investigate two mining impacted watersheds in the western United States (the Animas River in Colorado and the Boulder River in Montana). These studies provide the USDA Forest Service and BLM scientific data for implementing informed land-management decisions regarding cleanup of abandoned mine lands within each watershed. A similar integrated-science approach will be used to characterize the upper Prickly Pear Creek watershed with respect to water and streambed sediment chemistry, aquatic biota, and geologic framework. This integrated database presents data that will be used to identify important pathways of metals movement and biological impacts, thereby guiding resource management decisions of land-managers in several publications that are in preparation. Watershed-level characterization in terms of water quality, streambed sediment chemistry, and fish health will facilitate determinations of whether removal of contaminated materials or other cleanup activities are necessary, planning of short- and long-term restoration efforts, and development of a monitoring plan to document cleanup effectiveness.

Montana↗
USGS2010

Fort Collins Science Center-Fiscal year 2009 science accomplishments

Public land and natural resource managers in the United States are confronted with increasingly complex decisions that have important ramifications for both ecological and human systems. The scientists and technical professionals at the U.S. Geological Survey Fort Collins Science Center?many of whom are at the forefront of their fields?possess a unique blend of ecological, socioeconomic, and technological expertise. Because of this diverse talent, Fort Collins Science Center staff are able to apply a systems approach to investigating complicated ecological problems in a way that helps answer critical management questions. In addition, the Fort Collins Science Center has a long record of working closely with the academic community through cooperative agreements and other collaborations. The Fort Collins Science Center is deeply engaged with other U.S. Geological Survey science centers and partners throughout the Department of the Interior. As a regular practice, we incorporate the expertise of these partners in providing a full complement of ?the right people? to effectively tackle the multifaceted research problems of today's resource-management world. In Fiscal Year 2009, the Fort Collins Science Center's scientific and technical professionals continued research vital to Department of the Interior's science and management needs. Fort Collins Science Center work also supported the science needs of other Federal and State agencies as well as non-government organizations. Specifically, Fort Collins Science Center research and technical assistance focused on client and partner needs and goals in the areas of biological information management and delivery, enterprise information, fisheries and aquatic systems, invasive species, status and trends of biological resources (including human dimensions), terrestrial ecosystems, and wildlife resources. In the process, Fort Collins Science Center science addressed natural-science information needs identified in the U.S. Geological Survey Science Strategy (http://www.usgs.gov/science_strategy), including understanding and predicting change in ecosystems, climate variability and change, energy development and land management, the role of the environment and wildlife in human health, freshwater ecosystems, data integration, and evolving technologies. Several science projects were expanded in Fiscal Year 2009 to meet these evolving needs.

Open-File Report↗
USGS2014

Assessment of the geoavailability of trace elements from selected zinc minerals

This assessment focused on five zinc-bearing minerals. The minerals were subjected to a number of analyses including quantitative X-ray diffraction, optical microscopy, leaching tests, and bioaccessibility and toxicity studies. Like a previous comprehensive assessment of five copper-bearing minerals, the purpose of this assessment was to obtain structural and chemical information and to characterize the reactivity of each mineral to various simulated environmental and biological conditions. As in the copper minerals study, analyses were conducted consistent with widely accepted methods. Unless otherwise noted, analytical methods used for this study were identical to those described in the investigation of copper-bearing minerals. Two sphalerite specimens were included in the zinc-minerals set. One sphalerite was recovered from a mine in Balmat, New York; the second came from a mine in Creede, Colorado. The location and conditions of origin are significant because, as analyses confirmed, the two sphalerite specimens are quite different. For example, data acquired from a simulated gastric fluid (SGF) study indicate that the hydrothermally formed Creede sphalerite contains orders of magnitude higher arsenic, cadmium, manganese, and lead than the much older metamorphic Balmat sphalerite. The SGF and other experimental results contained in this report suggest that crystallizing conditions such as temperature, pressure, fluidization, or alteration processes significantly affect mineral properties—properties that, in turn, influence reactivity, solubility, and toxicity. The three remaining minerals analyzed for this report—smithsonite, hemimorphite, and hydrozincite—are all secondary minerals or alteration products of zinc-ore deposits. In addition, all share physical characteristics such as tenacity, density, streak, and cleavage. Similarities end there. The chemical composition, unit-cell parameters, acid-neutralizing potential, and other observable and quantifiable properties indicate very different minerals. Only one of each of these minerals was studied. Had this assessment included multiples of these minerals, geochemical and mineralogical distinctions would have emerged, similar to the results for the two sphalerite specimens.

Arizona;Chihuahua;Colorado;New York↗
USGS2015

Sixth International Limnogeology Congress: abstract volume, Reno, Nevada, June 15-19, 2015

Limnogeology is the study of modern lakes and lake deposits in the geologic record. Limnogeologists have been active since the 1800s, but interest in limnogeology became prevalent in the early 1990s when it became clear that lake deposits contain continental environmental and climate records. A society that is focused on limnogeology would allow greater communication and access to research on these important subjects and contribute to providing sound science used to understand rapid global changes in our modern world; thus, the International Association of Limnogeology was founded in 1995 at the first International Limnogeology Congress (ILIC) held in Copenhagen, Denmark. The Sixth International Limnogeology Congress (ILIC6) was held in Reno, Nevada, from June 15–19, 2015. The ILIC meetings have been held every 4 years since the first meeting in1995 and were subsequently convened in Brest, France (1999), Tucson, Arizona, USA (2003), Barcelona, Spain (2007), and Konstanz, Germany (2011). The Congress in Reno, USA marks the second time the Congress has been held in the United States and more than 150 scientists from every part of the world participated. About one-half of the participants were from North America, together with scientists from Europe, South America, Asia, Africa, Australia, and New Zealand. The format of the Reno Congress followed the format originated at the Tucson Congress (ILIC3), which is unusual for scientific meetings. Nine keynote speakers spread throughout the Congress gave 1-hour talks, with the rest of the time available for viewing posters that were presented by the bulk of the participants. Keynote presentations were diverse and showed the breadth of research that is being done in lake systems worldwide. The abstracts of the keynote speakers and about 140 poster presentations are included in this volume. These posters cover a variety of limnologic, paleolimnologic, and limnogeologic topics including contaminant histories of lakes, the role of groundwater in lake processes, the formation of minerals in lake sediments, terminal lakes, how lakes reveal climate changes and paleohydrologic processes, the impact of volcanic emissions on lakes, as well as the biologic and chemical evolution of lake systems. The U.S. Geological Survey has sponsored each ILIC that has been held in the United States because of the importance of understanding paleoclimate and contaminant histories of lakes, two main themes of the Congress. This volume provides a permanent record of the wide variety of studies that are being conducted in modern lakes and ancient lake deposits worldwide, and it provides a stepping stone for any one desiring further discussion of the work that was presented at ILIC6.

Open-File Report↗
USGS2009

Occurrence and Trends of Selected Chemical Constituents in Bottom Sediment, Grand Lake O' the Cherokees, Northeast Oklahoma, 1940-2008

After over 100 years of continuous activity, lead and zinc mining in the Tri-State Mining District (hereafter referred to as the TSMD) in parts of southeast Kansas, southwest Missouri, and northeast Oklahoma ended in the 1970s. The mining activity resulted in substantial historical and ongoing input of cadmium, lead, and zinc to the environment including Grand Lake O' the Cherokees (hereafter referred to as Grand Lake), a large reservoir in northeast Oklahoma. To help determine the extent and magnitude of contamination in Grand Lake, a one-year study was conducted by the U.S. Geological Survey in cooperation with the U.S. Fish and Wildlife Service. Bottom-sediment coring at five sites was used to investigate the occurrence of cadmium, lead, zinc, and other selected constituents in the bottom sediment of Grand Lake. Cadmium concentrations in the bottom sediment of Grand Lake ranged from 2.3 to 3.6 mg/kg (milligrams per kilogram) with a median of 3.5 mg/kg (5 samples). Compared to an estimated local background concentration of 0.6 mg/kg, the historical mining activity increased cadmium concentrations by about 280 to 500 percent. Lead concentrations ranged from 35 to 102 mg/kg with a median of 59 mg/kg (50 samples). Compared to an estimated local background concentration of 20 mg/kg, the historical mining activity increased lead concentrations by about 75 to 410 percent. The range in zinc concentrations was 380 to 986 mg/kg with a median of 765 mg/kg (50 samples). Compared to an estimated local background concentration of 100 mg/kg, the historical mining activity increased zinc concentrations by about 280 to 890 percent. With the exception of the most upstream coring site, the lead and zinc depositional profiles generally were similar in terms of the range in concentrations measured and the temporal pattern observed. Depositional profiles for lead and zinc indicated mid-core peaks followed by concentrations that decreased since about the 1980s. The depositional profiles reflect the complex interaction of several factors including historical mining and related activities, mine drainage, remediation, landscape stabilization, precipitation and associated runoff, and the erosion and transport of contaminated and clean sediments within the basin. Compared to sediment-quality guidelines, the Grand Lake samples had cadmium concentrations that were substantially less than the general probable-effects concentration (PEC) (4.98 mg/kg) and a TSMD-specific PEC (11.1 mg/kg). The PECs represent the concentration above which toxic biological effects are likely to occur. Likewise, all sediment samples had lead concentrations that were substantially less than the general PEC (128 mg/kg) and a TSMD-specific PEC (150 mg/kg). Zinc concentrations typically exceeded the general PEC (459 mg/kg), but were substantially less than a TSMD-specific PEC (2,083 mg/kg). Throughout the history of Grand Lake, lead and zinc concentrations in the deposited sediment did not approach or exceed the TSMD-specific PECs. As of 2008, legacy effects of mining still included the delivery of contaminated sediment to Grand Lake by the Spring and Neosho Rivers. The Neosho River, with its larger flows and less-contaminated sediment, likely dilutes the load of contaminated sediment delivered to Grand Lake by the Spring River. The information contained in this report provides a baseline of Grand Lake conditions with which to compare future conditions that may represent a response to changes in mining-related activity in the Grand Lake Basin.

Scientific Investigations Report↗
USGS2014

Synthesis of studies in the fall low-salinity zone of the San Francisco Estuary, September-December 2011

In fall 2011, a large-scale investigation (fall low-salinity habitat investigation) was implemented by the Bureau of Reclamation in cooperation with the Interagency Ecological Program to explore hypotheses about the ecological role of low-salinity habitat in the San Francisco Estuary—specifically, hypotheses about the importance of fall low-salinity habitat to the biology of delta smelt Hypomesus transpacificus , a species endemic to the San Francisco Estuary and listed as threatened or endangered under federal and state endangered species legislation. The Interagency Ecological Program is a consortium of 10 agencies that work together to develop a better understanding of the ecology of the Estuary and the effects of the State Water Project and Federal Central Valley Project operations on the physical, chemical, and biological conditions of the San Francisco Estuary. The fall low-salinity habitat investigation constitutes one of the actions stipulated in the Reasonable and Prudent Alternative issued with the 2008 Biological Opinion of the U.S. Fish and Wildlife Service, which called for adaptive management of fall Sacramento-San Joaquin Delta outflow following “wet” and “above normal” water years to alleviate jeopardy to delta smelt and adverse modification of delta smelt critical habitat. The basic hypothesis of the adaptive management of fall low-salinity habitat is that greater outflows move the low-salinity zone (salinity 1–6), an important component of delta smelt habitat, westward and that moving the low-salinity zone westward of its position in the fall of recent years will benefit delta smelt, although the specific mechanisms providing such benefit are uncertain. An adaptive management plan was prepared to guide implementation of the adaptive management of fall low-salinity habitat and to reduce uncertainty. This report has three major objectives: • To provide a summary of the results from the first year of coordinated fall low-salinity habitat studies and monitoring. • To provide a synthesis of the results of the fall low-salinity habitat studies and other ongoing research and monitoring, to determine if the available information supports the hypotheses behind the adaptive management of fall low-salinity habitat as set forth in the adaptive management plan. • To begin to put the results from the fall low-salinity habitat studies into context within the larger body of knowledge regarding the San Francisco Estuary and, in particular, the upper San Francisco Estuary, including the Sacramento-San Joaquin Delta, Suisun Bay, and associated embayments. The basic approach of this report is to evaluate predictions derived from the hypotheses included in the conceptual model developed within the adaptive management plan. All available data from studies and monitoring conducted in fall 2011 and similar data from fall 2006, which was the most recent wet year preceding 2011, were considered. Data from 2005 and 2010 were also considered, to include the conditions antecedent to those years. Many of the predictions either could not be evaluated with the data available, or the needed data were not collected. Most of the predictions that could be addressed involved either the abiotic habitat components (that is, the physical environment) or delta smelt responses. In general, the fall low-salinity habitat investigation has been largely inconclusive as of the writing of this report. This is not to be unexpected in the first year of what is intended to be a multi-year adaptive-management effort. This report can be viewed as the first chapter of a “living document” that is to be continually updated as part of the adaptive management cycle. The results of this report, especially predictions with insufficient data for evaluation, indicate a number of science-based approaches to improve the fall low-salinity habitat investigations: • Develop a method of measuring “hydrodynamic complexity.” This concept is central to a number of the predictions that could not be evaluated. • Determine if wind speed warrants a stand-alone prediction. The wind-speed prediction is directly related to the turbidity predictions, and wind is only one of several factors important for determining turbidity. • Determine the correct spatial and temporal scale or scales necessary for monitoring and for studies to address the predicted abiotic and biotic responses. Many of the assessments in this report were based on monthly sampling of dynamic habitat components, such as phytoplankton and zooplankton populations, that can change on daily scales. • Address the nutrient predictions as part of developing a phytoplankton production model that includes nutrient cycling and other important processes, if feasible. At a minimum develop a mechanistic conceptual model to support more processed-based interpretations of data or design of new studies, rather than making simple predictions of increase or decrease. • Determine if studies of predation rates are feasible in areas where there are delta smelt.

California↗
USGS2013

Assessing the risk of nitrogen deposition to natural resources in the Four Corners area

Nitrogen (N) deposition in the western U.S. is on the rise and is already dramatically affecting terrestrial ecosystems. For example, N deposition has repeatedly been shown to lower air and water quality, increase greenhouse gas emissions, alter plant community composition, and significantly modify fire regimes. Accordingly, the effects of N deposition represent one of our largest environmental challenges and make difficult the National Park Service’s (NPS) important mission to “preserve the scenery and the natural and historic objects and the wildlife… unimpaired for the enjoyment of future generations”. Due to increased population growth and energy development (e.g., natural gas wells), the Four Corners region has become a notable ‘hotspot’ for N deposition. However, our understanding of how increased N deposition will affect these unique ecosystems, as well as how much deposition is actually occurring, remains notably poor. Here we used a multi-disciplinary approach to gathering information in an effort to help NPS safeguard the Four Corners national parks, both now and into the future. We applied modeling, field, and laboratory techniques to clarify current N deposition gradients and to help elucidate the ecosystem consequences of N deposition to the national parks of the Four Corners area. Our results suggest that NOx deposition does indeed represent a significant source of N to Mesa Verde National Park and, as expected, N deposition significantly affects coupled biogeochemical cycling (N, carbon, and phosphorus) of these landscapes. We also found some surprising results. For example, perhaps due to the low nutrient availability in these (and other) dryland ecosystems, although most other research suggests that adding N reduces N fixation rates, N additions did not consistently reduce natural N inputs via biological N2 fixation at our dryland sites. While the timeline of this pilot project is too brief to elucidate all the potential insight from the approach utilized here (e.g., we have fertilization plots to explore how N deposition affects Bromus tectorum invasion that will surely yield provoking results), we plan to continue this exciting line of questioning and expect further insight to be forthcoming.

Arches National Park, Canyonland National Park, Me↗
USGS2021

A study of marine temperature variations in the northern Gulf of Alaska across years of marine heatwaves and cold spells

We use over 100 in situ and remotely sensed temperature datasets to investigate thermal variability within and across the intertidal nearshore, coastal and offshore waters of the northern Gulf of Alaska. For the years 1970 through 2019 we document a warming trend of 0.24±0.10 °C per decade for the coastal northern shelf (0-250 m depth average) and a Gulf-wide sea surface temperature (SST) trend of 0.25±0.11 °C per decade. The Gulf-wide SST trend in the last halfcentury is more than twice that of the 0.11±0.003 °C warming rate computed for 1900-2019. Decorrelation length scales vary regionally and correlation of synoptic scale fluctuations (less than one month) between two stations rapidly degrades with increasing station distance, accounting for less than 10% of the covariance for separations exceeding 100 km. In contrast, stations separated by as much as 500 km retain 50% of their covariance in common for seasonal and sub-seasonal fluctuations. While satellite-based measures often capture most of the daily SST anomaly in coastal and offshore waters, a significant portion of the variance (30-40%) can remain unresolved, even exceeding 75% in the nearshore realm. Similarly, the North Pacific and Gulf of Alaska leading modes of SST variability leave large fractions (25-50%) of the subseasonal thermal variance unresolved. These evaluations show the importance of in situ temperature records for studies that seek to understand mechanistic responses of marine organisms to habitat variability at biologically important time and space scales. We find that near-bottom temperature anomalies on the outer shelf vary inversely with surface temperatures and with near-bottom salinity, suggesting that thermal anomalies are also linked with nutrient flux anomalies. A case study of the recent Pacific marine heatwave and transition out of preceding cool years shows that the northern Gulf of Alaska surface temperatures (0-50 m) were elevated from 2014 to 2019 relative to the long-term record. Coastal temperatures warmed contemporaneously with offshore waters through the 2013 calendar year. In contrast, deep inner shelf waters (200-250 m) exhibited delayed warming relative to the surface and relative to deep waters offshore at the same depth. While offshore surface waters cooled from early 2014 into 1-2 Science Synthesis Final Report Gulf Watch Alaska, 2021 early 2016, the shelf continued to warm over this time as the effects of local air-sea and advective heat fluxes continued to permeate across the northern Gulf. These results highlight the importance of different heating mechanisms for surface and near-bottom waters across the northern Gulf of Alaska.

Alaska↗
USGS2026

21st-century mangrove expansion along the southeastern United States

Warming winter temperatures are driving range expansion of tropical, cold-sensitive mangroves into temperate ecosystems. Along the Atlantic coast of North America, the mangrove range limit is particularly sensitive to climate variability and historical data demonstrate that the mangrove-salt marsh ecotone on this coast has shifted recurrently during recent centuries. However, a comprehensive understanding of how this mangrove-salt marsh ecotone may shift in the future remains lacking. Here, we combine ensemble forecasting of mangrove distribution for the next century with high-resolution oceanographic dispersal simulations, phenological observations, and historical hurricane data to project future mangrove-salt marsh dynamics at the rapidly changing range limit in northeastern Florida (USA). We show that warming winter temperatures will drive continued poleward expansion of mangroves along North America's Atlantic coast, potentially reaching South Carolina by 2100. With ongoing climate change, suitable mangrove habitat is projected to expand beyond the current range limit, and dispersal simulations suggest successful colonization of these sites from established mangrove populations. Additionally, patterns in hurricane directionality and intensity and field reports of propagule presence reveal that these high-energy events may significantly contribute to future mangrove range expansion by facilitating long-distance, storm-driven propagule dispersal. The encroachment of mangroves in salt marsh-dominated latitudes is expected to substantially modify wetland ecosystem function and structure, emphasizing how the identification of newly colonizable habitat can inform conservation strategies and site-specific decisions on mangrove management.

Florida, Georgia, North Carolina, South Carolina↗
USGS2016

Water temperature profiles for reaches of the Raging River during summer baseflow, King County, western Washington, July 2015

Re-introducing wood into rivers where it was historically removed is one approach to improving habitat conditions in rivers of the Pacific Northwest. The Raging River drainage basin, which flows into the Snoqualmie River at Fall City, western Washington, was largely logged during the 20th century and wood was removed from its channel. To improve habitat conditions for several species of anadromous salmonids that spawn and rear in the Raging River, King County Department of Transportation placed untethered log jams in a 250-meter reach where wood was historically removed. The U.S. Geological Survey measured longitudinal profiles of near-streambed temperature during summer baseflow along 1,026 meters of channel upstream, downstream, and within the area of wood placements. These measurements were part of an effort by King County to monitor the geomorphic and biological responses to these wood placements. Near-streambed temperatures averaged over about 1-meter intervals were measured with a fiber‑optic distributed temperature sensor every 30 minutes for 7 days between July 7 and 13, 2015. Vertical temperature profiles were measured coincident with the longitudinal temperature profile at four locations at 0 centimeters (cm) (at the streambed), and 35 and 70 cm beneath the streambed to document thermal dynamics of the hyporheic zone and surface water in the study reach.

Washington↗
USGS2015

Aquatics Systems Branch: transdisciplinary research to address water-related environmental problems

The Aquatic Systems Branch at the Fort Collins Science Center is a group of scientists dedicated to advancing interdisciplinary science and providing science support to solve water-related environmental issues. Natural resource managers have an increasing need for scientific information and stakeholders face enormous challenges of increasing and competing demands for water. Our scientists are leaders in ecological flows, riparian ecology, hydroscape ecology, ecosystem management, and contaminant biology. The Aquatic Systems Branch employs and develops state-of-the-science approaches in field investigations, laboratory experiments, remote sensing, simulation and predictive modeling, and decision support tools. We use the aquatic experimental laboratory, the greenhouse, the botanical garden and other advanced facilities to conduct unique research. Our scientists pursue research on the ground, in the rivers, and in the skies, generating and testing hypotheses and collecting quantitative information to support planning and design in natural resource management and aquatic restoration.

Fact Sheet↗
USGS2010

Basal Resources in Backwaters of the Colorado River Below Glen Canyon Dam-Effects of Discharge Regimes and Comparison with Mainstem Depositional Environments

Eight species of fish were native to the Colorado River before the closure of Glen Canyon Dam, but only four of these native species are currently present. A variety of factors are responsible for the loss of native fish species and the limited distribution and abundance of those that remain. These factors include cold and constant water temperatures, predation and competition with nonnative fish species, and food limitation. Backwaters are areas of stagnant flow in a return-current channel and are thought to be critical rearing habitat for juvenile native fish. Backwaters can be warmer than the main channel and may support higher rates of food production. Glen Canyon Dam is a peaking hydropower facility and, as a result, has subdaily variation in discharge because of changes in demand for power. Stable daily discharges may improve the quality of nearshore rearing habitats such as backwaters by increasing warming, stabilizing the substrate, and increasing food production. To evaluate whether backwaters have greater available food resources than main-channel habitats, and how resource availability in backwaters is affected by stable flow regimes, we quantified water-column and benthic food resources in backwaters seasonally for 1 year using both standing (organic matter concentration/density; chlorophyll a concentration/density; zooplankton concentration; benthic invertebrate density and biomass) and process measurements (chamber estimates of ecosystem metabolism). We compared backwater resource measurements with comparable data from main-channel habitats, and compared backwater data collected during stable discharge with data collected when there was subdaily variation in discharge. Rates of primary production in backwaters (mean gross primary production of 1.7 g O2/m2/d) and the main channel (mean gross primary production of 2.0 g O2/m2/d) were similar. Benthic organic matter standing stock (presented as ash-free dry mass-AFDM) was seven times higher in backwaters relative to main-channel habitats (median value of 210 g AFDM/m2 versus 27 g AFDM/m2); this likely reflects greater retention of tributary-derived organic matter in backwaters relative to main-channel habitats. Water-column and benthic organic matter were higher during periods of steady discharge relative to periods of fluctuating discharge. However, our steady-discharge data collection was confounded by tributary activity. Flooding tributaries contribute substantial quantities of sediment and organic matter to the Colorado River; there were two large tributary floods during our steady-discharge data collection but none during our fluctuating-discharge data collections. Although only preliminary data on invertebrate biomass are available at this time, invertebrate biomass in backwaters (range 2-27 mg AFDM/m2) appears low relative to previously published data from main-channel habitats (~100 mg AFDM/m2). The rate of water turnover in backwaters may be a master variable that affects both physical (for example, warming) and biological (for example, primary production) processes in backwaters. We used dye tracer studies to estimate turnover rates in backwaters across flow regimes. Turnover took considerably longer when discharge was stable compared to when there was subdaily variation in discharge (613 minutes versus 220 minutes). Our results indicate that backwaters may represent a sink for organic matter that enters from the main channel and that stable discharge, by lengthening water turnover times, will likely increase organic matter retention.

Open-File Report↗
USGS2015

Geologic and geophysical maps of the El Casco 7.5′ quadrangle, Riverside County, southern California, with accompanying geologic-map database

Introduction Earth materials and structures in the El Casco quadrangle provide considerable information about the late Cenozoic geologic evolution of southern California’s Inland Empire region (fig. 2). Important structural and stratigraphic elements include (1) modern traces of the right-lateral San Jacinto Fault zone, (2) older traces of the San Jacinto Fault zone, and (3) sedimentary materials and geologic structures that formed during the last eight million years or so and that record interactions within the San Andreas Fault system. These materials, and the structures that deform them, provide a geologic context 3 for investigations of groundwater recharge and subsurface flow (Waring, 1919; Burnham and Dutcher, 1960; Bloyd, 1971; Rewis and others, 2006). This geologic database of the El Casco 7.5′ quadrangle was prepared by the Basins and Landscape Co-Evolution Project (BALANCE), a regional geologic-mapping project sponsored jointly by the U.S. Geological Survey and the California Geological Survey. The database was developed as a contribution to the National Cooperative Geologic Mapping Program’s National Geologic Map Database, and provides a general geologic setting of the El Casco quadrangle. The database and map provide information about earth materials and geologic structures, including faults and folds that have developed in the quadrangle due to complexities in the San Andreas Fault system. Geologic information contained in the El Casco database is general-purpose data applicable to land-related investigations in the earth and biological sciences. The term “general-purpose” means that all geologic-feature classes have minimal information content adequate to characterize their general geologic characteristics and to interpret their general geologic history. However, no single feature class has enough information to definitively characterize its properties and origin. For this reason the database cannot be used for site-specific geologic evaluations, although it can be used to plan and guide investigations at the site-specific level.

California↗
USGS2011

Geospatial characteristics of Florida's coastal and offshore environments: Distribution of important habitats for coastal and offshore biological resources and offshore sand resources

The Geospatial Characteristics GeoPDF of Florida's Coastal and Offshore Environments is a comprehensive collection of geospatial data describing the political boundaries and natural resources of Florida. This interactive map provides spatial information on bathymetry, sand resources, and locations of important habitats (for example, Essential Fish Habitats (EFH), nesting areas, strandings) for marine invertebrates, fish, reptiles, birds, and marine mammals. The map should be useful to coastal resource managers and others interested in marine habitats and submerged obstructions of Florida's coastal region. In particular, as oil and gas explorations continue to expand, the map can be used to explore information regarding sensitive areas and resources in the State of Florida. Users of this geospatial database will have access to synthesized information in a variety of scientific disciplines concerning Florida's coastal zone. This powerful tool provides a one-stop assembly of data that can be tailored to fit the needs of many natural resource managers. The map was originally developed to assist the Bureau of Ocean Energy Management, Regulation, and Enforcement (BOEMRE) and coastal resources managers with planning beach restoration projects. The BOEMRE uses a systematic approach in planning the development of submerged lands of the Continental Shelf seaward of Florida's territorial waters. Such development could affect the environment. BOEMRE is required to ascertain the existing physical, biological, and socioeconomic conditions of the submerged lands and estimate the impact of developing these lands. Data sources included the National Oceanic and Atmospheric Administration, BOEMRE, Florida Department of Environmental Protection, Florida Geographic Data Library, Florida Fish and Wildlife Conservation Commission, Florida Natural Areas Inventory, and the State of Florida, Bureau of Archeological Research. Federal Geographic Data Committee (FGDC) compliant metadata are provided as attached xml files for all geographic information system (GIS) layers.

Florida↗
USGS2011

Geospatial characteristics of Florida's coastal and offshore environments: Coastal habitats, artificial reefs, wrecks, dumping grounds, harbor obstructions and offshore sand resources

The Geospatial Characteristics GeoPDF of Florida's Coastal and Offshore Environments is a comprehensive collection of geospatial data describing the political boundaries and natural resources of Florida. This interactive map provides spatial information on bathymetry, sand resources, coastal habitats, artificial reefs, shipwrecks, dumping grounds, and harbor obstructions. The map should be useful to coastal resource managers and others interested in marine habitats and submerged obstructions of Florida's coastal region. In particular, as oil and gas explorations continue to expand, the map may be used to explore information regarding sensitive areas and resources in the State of Florida. Users of this geospatial database will have access to synthesized information in a variety of scientific disciplines concerning Florida's coastal zone. This powerful tool provides a one-stop assembly of data that can be tailored to fit the needs of many natural resource managers. The map was originally developed to assist the Bureau of Ocean Energy Management, Regulation, and Enforcement (BOEMRE) and coastal resources managers with planning beach restoration projects. The BOEMRE uses a systematic approach in planning the development of submerged lands of the Continental Shelf seaward of Florida's territorial waters. Such development could affect the environment. BOEMRE is required to ascertain the existing physical, biological, and socioeconomic conditions of the submerged lands and estimate the impact of developing these lands. Data sources included the National Oceanic and Atmospheric Administration, BOEMRE, Florida Department of Environmental Protection, Florida Geographic Data Library, Florida Fish and Wildlife Conservation Commission, Florida Natural Areas Inventory, and the State of Florida, Bureau of Archeological Research. Federal Geographic Data Committee (FGDC) compliant metadata are provided as attached xml files for all geographic information system (GIS) layers.

Florida↗