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At least 1,621 records · Page 90Linked to original sources
USGS1997

Sequence variation of the glycoprotein gene identifies three distinct lineages within field isolates of viral hemorrhagic septicemia virus, a fish rhabdovirus

To evaluate the genetic diversity of viral haemorrhagic septicaemia virus (VHSV), the sequence of the glycoprotein genes (G) of 11 North American and European isolates were determined. Comparison with the G protein of representative members of the family Rhabdoviridae suggested that VHSV was a different virus species from infectious haemorrhagic necrosis virus (IHNV) and Hirame rhabdovirus (HIRRV). At a higher taxonomic level, VHSV, IHNV and HIRRV formed a group which was genetically closest to the genus Lyssavirus. Compared with each other, the G genes of VHSV displayed a dissimilar overall genetic diversity which correlated with differences in geographical origin. The multiple sequence alignment of the complete G protein, showed that the divergent positions were not uniformly distributed along the sequence. A central region (amino acid position 245-300) accumulated substitutions and appeared to be highly variable. The genetic heterogeneity within a single isolate was high, with an apparent internal mutation frequency of 1.2 x 10(-3) per nucleotide site, attesting the quasispecies nature of the viral population. The phylogeny separated VHSV strains according to the major geographical area of isolation: genotype I for continental Europe, genotype II for the British Isles, and genotype III for North America. Isolates from continental Europe exhibited the highest genetic variability, with sub-groups correlated partially with the serological classification. Neither neutralizing polyclonal sera, nor monoclonal antibodies, were able to discriminate between the genotypes. The overall structure of the phylogenetic tree suggests that VHSV genetic diversity and evolution fit within the model of random change and positive selection operating on quasispecies.

Journal of General Virology↗
USGS2013

Red-backed vole brain promotes highly efficient in vitro amplification of abnormal prion protein from macaque and human brains infected with variant Creutzfeldt-Jakob disease agent.

Rapid antemortem tests to detect individuals with transmissible spongiform encephalopathies (TSE) would contribute to public health. We investigated a technique known as protein misfolding cyclic amplification (PMCA) to amplify abnormal prion protein (PrP TSE ) from highly diluted variant Creutzfeldt-Jakob disease (vCJD)-infected human and macaque brain homogenates, seeking to improve the rapid detection of PrP TSE in tissues and blood. Macaque vCJD PrP TSE did not amplify using normal macaque brain homogenate as substrate (intraspecies PMCA). Next, we tested interspecies PMCA with normal brain homogenate of the southern red-backed vole (RBV), a close relative of the bank vole, seeded with macaque vCJD PrP TSE . The RBV has a natural polymorphism at residue 170 of the PrP-encoding gene (N/N, S/S, and S/N). We investigated the effect of this polymorphism on amplification of human and macaque vCJD PrP TSE . Meadow vole brain (170N/N PrP genotype) was also included in the panel of substrates tested. Both humans and macaques have the same 170S/S PrP genotype. Macaque PrP TSE was best amplified with RBV 170S/S brain, although 170N/N and 170S/N were also competent substrates, while meadow vole brain was a poor substrate. In contrast, human PrP TSE demonstrated a striking narrow selectivity for PMCA substrate and was successfully amplified only with RBV 170S/S brain. These observations suggest that macaque PrP TSE was more permissive than human PrP TSE in selecting the competent RBV substrate. RBV 170S/S brain was used to assess the sensitivity of PMCA with PrP TSE from brains of humans and macaques with vCJD. PrP TSE signals were reproducibly detected by Western blot in dilutions through 10 -12 of vCJD-infected 10% brain homogenates. This is the first report showing PrP TSE from vCJD-infected human and macaque brains efficiently amplified with RBV brain as the substrate. Based on our estimates, PMCA showed a sensitivity that might be sufficient to detect PrP TSE in vCJD-infected human and macaque blood.

PLoS ONE↗
USGS2011

Estimates of tracer-based piston-flow ages of groundwater from selected sites: National Water-Quality Assessment Program, 1992–2005

This report documents selected age data interpreted from measured concentrations of environmental tracers in groundwater from 1,399 National Water-Quality Assessment (NAWQA) Program groundwater sites across the United States. The tracers of interest were chlorofluorocarbons (CFCs), sulfur hexafluoride (SF 6 ), and tritium/helium-3 ( 3 H/ 3 He). Tracer data compiled for this analysis primarily were from wells representing two types of NAWQA groundwater studies—Land-Use Studies (shallow wells, usually monitoring wells, in recharge areas under dominant land-use settings) and Major-Aquifer Studies (wells, usually domestic supply wells, in principal aquifers and representing the shallow, used resource). Reference wells (wells representing groundwater minimally impacted by anthropogenic activities) associated with Land-Use Studies also were included. Tracer samples were collected between 1992 and 2005, although two networks sampled from 2006 to 2007 were included because of network-specific needs. Tracer data from other NAWQA Program components (Flow System Studies, which are assessments of processes and trends along groundwater flow paths, and various topical studies) were not compiled herein. Tracer data from NAWQA Land-Use Studies and Major-Aquifer Studies that previously had been interpreted and published are compiled herein (as piston-flow ages), but have not been reinterpreted. Tracer data that previously had not been interpreted and published are evaluated using documented methods and compiled with aqueous concentrations, equivalent atmospheric concentrations (for CFCs and SF 6 ), estimates of tracer-based piston-flow ages, and selected ancillary data, such as redox indicators, well construction, and major dissolved gases (N 2 , O 2 , Ar, CH 4 , and CO 2 ). Tracer-based piston-flow ages documented in this report are simplistic representations of the tracer data. Tracer-based piston-flow ages are a convenient means of conceptualizing groundwater age. However, the piston-flow model is based on the potentially limiting assumptions that tracer transport is advective and that no mixing occurs. Additional uncertainties can arise from tracer degradation, sorption, contamination, or fractionation; terrigenic (natural) sources of tracers; spatially variable atmospheric tracer concentrations; and incomplete understanding of mechanisms of recharge or of the conditions under which atmospheric tracers were partitioned to recharge. The effects of some of these uncertainties are considered herein. For example, degradation, contamination, or fractionation often can be identified or inferred. However, detailed analysis of the effects of such uncertainties on the tracer-based piston-flow ages is constrained by sparse data and an absence of complementary lines of evidence, such as detailed solute transport simulations. Thus, the tracer-based piston-flow ages compiled in this report represent only an initial interpretation of the tracer data.

Scientific Investigations Report↗
USGS2011

Effects of flow dynamics on the aquatic-terrestrial transition zone (ATTZ) of lower Missouri river sandbars with implications for selected biota

Sandbars are an important aquatic terrestrial transition zone (ATTZ) in the active channel of rivers that provide a variety of habitat conditions for riverine biota. Channelization and flow regulation in many large rivers have diminished sandbar habitats and their rehabilitation is a priority. We developed sandbar-specific models of discharge-area relationships to determine how changes in flow regime affect the area of different habitat types within the submerged sandbar ATTZ (depth) and exposed sandbar ATTZ (elevation) for a representative sample of Lower Missouri River sandbars. We defined six different structural habitat types within the sandbar ATTZ based on depth or exposed elevation ranges that are important to different biota during at least part of their annual cycle for either survival or reproduction. Scenarios included the modelled natural flow regime, current managed flow regime and two environmental flow options, all modelled within the contemporary river active channel. Thirteen point and wing-dike sandbars were evaluated under four different flow scenarios to explore the effects of flow regime on seasonal habitat availability for foraging of migratory shorebirds and wading birds, nesting of softshell turtles and nursery of riverine fishes. Managed flows provided more foraging habitat for shorebirds and wading birds and more nursery habitat for riverine fishes within the channelized reach sandbar ATTZ than the natural flow regime or modelled environmental flows. Reduced summer flows occurring under natural and environmental flow alternatives increased exposed sandbar nesting habitat for softshell turtle hatchling emergence. Results reveal how management of channelized and flow regulated large rivers could benefit from a modelling framework that couples hydrologic and geomorphic characteristics to predict habitat conditions for a variety of biota.

River Research and Applications↗
USGS2022

Geochemical investigations of selected Eastern United States watersheds affected by acid deposition

The effects of acid deposition on surface waters in eastern United States watersheds having similar size, physiography, climate and land use are related to the composition of the underlying bedrock. Watersheds developed on greenstone, calcareous shale, sandstone, granite, and schist differ in their ability to neutralize acid deposition. Surface waters in watersheds developed on greenstone and calcareous shale are not discernably affected by acidification. Wastersheds developed on sand-stone have little capacity to neutralize acid rain; consequently, stream acidity is similar to that of precipitation. Watersheds developed on granite and schist are intermediate in their capacity to neutralize acid deposition. Bedrock composition appears to be the major property controlling surface-water chemistry in these systems; hydrologic flow paths and the nature of surficial materials and vegetation also influence chemical responses to acid deposition in watersheds.

Journal of the Geological Society↗
USGS2017

Tambora and the mackerel year: Phenology and fisheries during an extreme climate event

Global warming has increased the frequency of extreme climate events, yet responses of biological and human communities are poorly understood, particularly for aquatic ecosystems and fisheries. Retrospective analysis of known outcomes may provide insights into the nature of adaptations and trajectory of subsequent conditions. We consider the 1815 eruption of the Indonesian volcano Tambora and its impact on Gulf of Maine (GoM) coastal and riparian fisheries in 1816. Applying complex adaptive systems theory with historical methods, we analyzed fish export data and contemporary climate records to disclose human and piscine responses to Tambora’s extreme weather at different spatial and temporal scales while also considering sociopolitical influences. Results identified a tipping point in GoM fisheries induced by concatenating social and biological responses to extreme weather. Abnormal daily temperatures selectively affected targeted fish species—alewives, shad, herring, and mackerel—according to their migration and spawning phenologies and temperature tolerances. First to arrive, alewives suffered the worst. Crop failure and incipient famine intensified fishing pressure, especially in heavily settled regions where dams already compromised watersheds. Insufficient alewife runs led fishers to target mackerel, the next species appearing in abundance along the coast; thus, 1816 became the “mackerel year.” Critically, the shift from riparian to marine fisheries persisted and expanded after temperatures moderated and alewives recovered. We conclude that contingent human adaptations to extraordinary weather permanently altered this complex system. Understanding how adaptive responses to extreme events can trigger unintended consequences may advance long-term planning for resilience in an uncertain future.

Maine, Massachusetts↗
USGS2011

A tree-ring reconstruction of the salinity gradient in the northern estuary of San Francisco Bay

Blue oak tree-ring chronologies correlate highly with winter–spring precipitation totals over California, with Sacramento and San Joaquin river stream flow, and with seasonal variations in the salinity gradient in San Francisco Bay. The convergence of fresh and saline currents can influence turbidity, sediment accumulation, and biological productivity in the estuary. Three selected blue oak chronologies were used to develop a 625-year-long reconstruction of the seasonal salinity gradient, or low salinity zone (LSZ), which provides a unique perspective on the interannual-to-decadal variability of this important estuarine habitat indicator. The reconstruction was calibrated with instrumental LSZ data for the winter–spring season, and explains 73% of the variance in the February–June position of the LSZ from 1956 to 2003. Because this calibration period post-dates the sweeping changes that have occurred to land cover, channel morphology, and natural streamflow regimes in California, the reconstruction provides an idealized estimate for how the LSZ might have fluctuated under the seasonal precipitation variations of the past 625 years, given the modern geometry and bathymetry of the estuary and land cover across the drainage basin. The February–June season integrates precipitation and runoff variability during the cool season, and does not extend into the late-summer dry season when LSZ extremes can negatively affect Sacramento–San Joaquin Delta (Delta) agriculture and some aquatic organisms. However, there is such strong inter-seasonal persistence in the instrumental LSZ data that precipitation totals during the cool season can strongly pre-condition LSZ position in late summer. The 625-year-long reconstruction indicates strong interannual and decadal variability, the frequent recurrence of consecutive 2-year LSZ maxima and minima, large-scale ocean atmospheric forcing, and an interesting asymmetrical influence of warm El Niño–Southern Oscillation (ENSO) events.

California↗
USGS2012

Simulation of daily streamflows at gaged and ungaged locations within the Cedar River Basin, Iowa, using a Precipitation-Runoff Modeling System model

The U.S. Geological Survey, in cooperation with the Iowa Department of Natural Resources, conducted a study to examine techniques for estimation of daily streamflows using hydrological models and statistical methods. This report focuses on the use of a hydrologic model, the U.S. Geological Survey's Precipitation-Runoff Modeling System, to estimate daily streamflows at gaged and ungaged locations. The Precipitation-Runoff Modeling System is a modular, physically based, distributed-parameter modeling system developed to evaluate the impacts of various combinations of precipitation, climate, and land use on surface-water runoff and general basin hydrology. The Cedar River Basin was selected to construct a Precipitation-Runoff Modeling System model that simulates the period from January 1, 2000, to December 31, 2010. The calibration period was from January 1, 2000, to December 31, 2004, and the validation periods were from January 1, 2005, to December 31, 2010 and January 1, 2000 to December 31, 2010. A Geographic Information System tool was used to delineate the Cedar River Basin and subbasins for the Precipitation-Runoff Modeling System model and to derive parameters based on the physical geographical features. Calibration of the Precipitation-Runoff Modeling System model was completed using a U.S. Geological Survey calibration software tool. The main objective of the calibration was to match the daily streamflow simulated by the Precipitation-Runoff Modeling System model with streamflow measured at U.S. Geological Survey streamflow gages. The Cedar River Basin daily streamflow model performed with a Nash-Sutcliffe efficiency ranged from 0.82 to 0.33 during the calibration period, and a Nash-Sutcliffe efficiency ranged from 0.77 to -0.04 during the validation period. The Cedar River Basin model is meeting the criteria of greater than 0.50 Nash-Sutcliffe and is a good fit for streamflow conditions for the calibration period at all but one location, Austin, Minnesota. The Precipitation-Runoff Modeling System model accurately simulated streamflow at four of six uncalibrated sites within the basin. Overall, there was good agreement between simulated and measured seasonal and annual volumes throughout the basin for calibration and validation sites. The calibration period ranged from 0.2 to 20.8 percent difference, and the validation period ranged from 0.0 to 19.5 percent difference across all seasons and total annual runoff. The Precipitation-Runoff Modeling System model tended to underestimate lower streamflows compared to the observed streamflow values. This is an indication that the Precipitation-Runoff Modeling model needs more detailed groundwater and storage information to properly model the low-flow conditions in the Cedar River Basin.

Iowa↗
USGS1987

Potential for pollution of the Upper Floridan aquifer from five sinkholes and an internally drained basin in west-central Florida

Sinkholes are natural and common geologic features in west-central Florida, which is underlain by water soluble limestone deposits. Dissolution of these deposits is the fundamental cause of sinkhole development. Sinkholes and other karst features are more pronounced in the northern part of the study area, but sinkhole activity has occurred throughout the area. Fifty-eight sinkholes with known or suspected connection to the Upper Floridan aquifer are located in the study area. An internally drained basin near the city of Brandon and five sinkholes in Hillsborough, Pasco, and Hernando Counties were selected for detailed investigation. At all sites, chemical or biological constituents were detected that indicate pollutants had entered the aquifer. A generalized classification, based on the potential to pollute, was applied to the selected sites. Four of the sites have high potential and two have moderate potential to pollute the Upper Floridan aquifer. All of the sites investigated are capable of recharging large volumes of water to the Upper Floridan aquifer in short periods of time. Continued monitoring of the quality of water entering the sinkholes and of wells downgradient to the sinks is needed to assess the future impacts on the aquifer. (Author 's abstract)

Water-Resources Investigations Report↗
USGS1950

Fifth special report of the Hawaiian Volcano Observatory of the Hawaiian Volcano Research Association and the U.S. Geological Survey: Abrasion hardness

After reviewing the work of sclerometry, this paper shows that yielding and relative softness are the mechanical basis of what should be called malacometry. The experiments have been made with diamond drills, ring cuts, end millers and grinding wheels. Auerbach's "limited scope of the Mohs list" is quantitatively confirmed. The wear of diamonds is examined. A program is carried out, for rotary or annular abrasion by diamond under three applications of energy, each progressively slower. A selected commercial talc is the control substance of softness value 100. The instruments used are synchronous motors, drill presses, wheel grinders, and watchmaker lathes. Some 200 minerals, woods, metals, glasses and plastics were originally measured. Hardness tables and curves are shown for comparison with volumetric abradability. For a Mohs succession the softer substances abrade relatively more under higher energy of contact friction, and any one substance shows higher relative values under lower energy of attrition; in other words, under slower scratching. An artificially cut diamond octahedron gives more consistent results than a natural crystal, under light pressures. Standard successions of relative abradability measurements do not hold good under different energies of attack. Functions of plasticity, brittleness, cleavage, powder lubricity, ductility and the like introduce various anomalies, and constancy of pressure varies with variable yielding. The supposition that rhythmic instrumental abrading will hold its mechanical constants, while the substance attacked yields in accord with its own surface molecular mobility relative to a control substance, is only approximately true. At low energies the approximation is better than at high, but at high speeds the wear of tool is less. Hence the advantage of using with slow speed a replaceable tool. Substances of different categories such as steels and woods, differ in behavior from minerals. The Mohs System has the great advantage of extending the controls from mineral to mineral up through the whole scale, and is purely qualitative. It is not numerically quantitative at all in terms of equal units. A principal result of this investigation is that 80 per cent of the Mohs Scale, Numbers 3 to 10, are by common consent within 1 per cent of a malacometric scale numbered 1 to 100. The scientists who determined this relation were the sclerometry investigators of the nineteenth century, who mistakenly thought that the wide intervals of sclerometry are between the hard minerals. They used the reciprocals of the measures of yielding. The simple scratch tester finally arrived at is quite different from the instruments of Parts II and III. It eliminates diamond drilling, retains the Mohs controls and utilizes a dental grinding wheel and a modern low speed motor. The object of this research has been to design a simple instrument for many uses, especially for the mechanic's shop. It is planned for manufacture at an early date. The author is indebted to Dr. Earl Ingerson, Chief, Geochemistry and Petrology Branch, for critical correction and approval of this paper, by authority of the Director, U. S. Geological Survey.

Report of the Hawaiian Volcano Observatory↗
USGS2008

Methane hydrates

Gas hydrate is a solid, naturally occurring substance consisting predominantly of methane gas and water. Recent scientific drilling programs in Japan, Canada, the United States, Korea and India have demonstrated that gas hydrate occurs broadly and in a variety of forms in shallow sediments of the outer continental shelves and in Arctic regions. Field, laboratory and numerical modelling studies conducted to date indicate that gas can be extracted from gas hydrates with existing production technologies, particularly for those deposits in which the gas hydrate exists as pore-filling grains at high saturation in sand-rich reservoirs. A series of regional resource assessments indicate that substantial volumes of gas hydrate likely exist in sand-rich deposits. Recent field programs in Japan, Canada and in the United States have demonstrated the technical viability of methane extraction from gas-hydrate-bearing sand reservoirs and have investigated a range of potential production scenarios. At present, basic reservoir depressurisation shows the greatest promise and can be conducted using primarily standard industry equipment and procedures. Depressurisation is expected to be the foundation of future production systems; additional processes, such as thermal stimulation, mechanical stimulation and chemical injection, will likely also be integrated as dictated by local geological and other conditions. An innovative carbon dioxide and methane swapping technology is also being studied as a method to produce gas from select gas hydrate deposits. In addition, substantial additional volumes of gas hydrate have been found in dense arrays of grain-displacing veins and nodules in fine-grained, clay-dominated sediments; however, to date, no field tests, and very limited numerical modelling, have been conducted with regard to the production potential of such accumulations. Work remains to further refine: (1) the marine resource volumes within potential accumulations that can be produced through exploratory drilling programs; (2) the tools for gas hydrate detection and characterisation from remote sensing data; (3) the details of gas hydrate reservoir production behaviour through additional, well-monitored and longer duration field tests and (4) the understanding of the potential environmental impacts of gas hydrate resource development. The results of future production tests, in the context of varying market and energy supply conditions around the globe, will be the key to determine the ultimate timing and scale of the commercial production of natural gas from gas hydrates.

Book chapter↗
USGS2017

Achieving full connectivity of sites in the multiperiod reserve network design problem

The conservation reserve design problem is a challenge to solve because of the spatial and temporal nature of the problem, uncertainties in the decision process, and the possibility of alternative conservation actions for any given land parcel. Conservation agencies tasked with reserve design may benefit from a dynamic decision system that provides tactical guidance for short-term decision opportunities while maintaining focus on a long-term objective of assembling the best set of protected areas possible. To plan cost-effective conservation over time under time-varying action costs and budget, we propose a multi-period mixed integer programming model for the budget-constrained selection of fully connected sites. The objective is to maximize a summed conservation value over all network parcels at the end of the planning horizon. The originality of this work is in achieving full spatial connectivity of the selected sites during the schedule of conservation actions.

Computers & Operations Research↗
USGS2016

Quality of surface water in Missouri, water year 2015

The U.S. Geological Survey, in cooperation with the Missouri Department of Natural Resources, designed and operates a series of monitoring stations on streams and springs throughout Missouri known as the Ambient Water-Quality Monitoring Network. During water year 2015 (October 1, 2014, through September 30, 2015), data were collected at 74 stations—72 Ambient Water-Quality Monitoring Network stations and 2 U.S. Geological Survey National Stream Quality Assessment Network stations. Dissolved oxygen, specific conductance, water temperature, suspended solids, suspended sediment, Escherichia coli bacteria, fecal coliform bacteria, dissolved nitrate plus nitrite as nitrogen, total phosphorus, dissolved and total recoverable lead and zinc, and select pesticide compound summaries are presented for 71 of these stations. The stations primarily have been classified into groups corresponding to the physiography of the State, primary land use, or unique station types. In addition, a summary of hydrologic conditions in the State including peak streamflows, monthly mean streamflows, and 7-day low flows is presented.

Missouri↗
USGS2008

Water-quality data for pharmaceuticals and other organic wastewater contaminants in ground water and in untreated drinking water sources in the United States, 2000-01

This report presents water-quality data from two nationwide studies on the occurrence and distribution of organic wastewater contaminants. These data are part of the continuing effort of the U.S. Geological Survey Toxic Substances Hydrology Program to collect baseline information on the environmental occurrence of pharmaceuticals and other organic wastewater contaminants. In 2000, samples were collected from 47 ambient ground-water sites (not drinking-water wells) in 18 states and analyzed for 65 organic wastewater contaminants. In the summer of 2001, samples were collected from 74 sources of raw, untreated, drinking water in 25 states and Puerto Rico and analyzed for 100 organic wastewater contaminants. These sources comprise 25 ground-water and 49 surface-water sources of drinking water serving populations ranging from one family to more than 8 million people. Site selection for both studies focused on areas known or suspected to contain sources of animal and/or human wastewater. The five most frequently detected compounds in samples collected from ambient ground-water sites are N,N-diethyltoluamide (35 percent, insect repellant), bisphenol A (30 percent, plasticizer), tri(2-chloroethy) phosphate (30 percent, fire retardant), sulfamethoxazole (23 percent, veterinary and human antibiotic), and 4-octylphenol monoethoxylate (19 percent, detergent metabolite). The five most frequently detected organic wastewater contaminants in samples of untreated drinking water from surface-water sources are cholesterol (59 percent, natural sterol), metolachlor (53 percent, herbicide), cotinine (51 percent, nicotine metabolite), β-sitosterol (37 percent, natural plant sterol), and 1,7-dimethylxanthine (27 percent, caffeine metabolite). The five most frequently detected organic wastewater contaminants in samples of untreated drinking water from ground-water sources are tetrachloroethylene (24 percent, solvent), carbamazepine (20 percent, pharmaceutical), bisphenol A (20 percent, plasticizer), 1,7-dimethylxanthine (16 percent, caffeine metabolite), and tri(2-chloroethyl) phosphate (12 percent, fire retardant).

Open-File Report↗
USGS2009

Fort Collins Science Center - Fiscal Year 2008 Science Accomplishments

Public land and natural resource managers in the United States are confronted with increasingly complex decisions that have important ramifications for both ecological and human systems. The scientists and technical professionals at the U.S. Geological Survey (USGS) Fort Collins Science Center (FORT) contribute a unique blend of ecological, socioeconomic, and technological expertise to investigating complicated ecological problems that address critical management questions. In Fiscal Year 2008 (FY08), FORT's scientific and technical professionals continued research vital to the science and management needs of U.S. Department of the Interior agencies and other entities. This annual report describes select FY08 accomplishments in research and technical assistance involving biological information management and delivery; aquatic, riparian, and managed-river ecosystems; invasive species; status and trends of biological resources (including human dimensions and social science); terrestrial ecosystems; and fish and wildlife resources.

Open-File Report↗
USGS2009

Quality of Surface Water in Missouri, Water Year 2008

The U.S. Geological Survey, in cooperation with the Missouri Department of Natural Resources, designed and operates a series of monitoring stations on streams throughout Missouri known as the Ambient Water-Quality Monitoring Network. During the 2008 water year (October 1, 2007, through September 30, 2008), data were collected at 67 stations, including two U.S. Geological Survey National Stream Quality Accounting Network stations and one spring sampled in cooperation with the U.S. Forest Service. Dissolved oxygen, specific conductance, water temperature, suspended solids, suspended sediment, fecal coliform bacteria, Escherichia coli bacteria, dissolved nitrate plus nitrite, total phosphorus, dissolved and total recoverable lead and zinc, and selected pesticide data summaries are presented for 64 of these stations. The stations primarily have been classified into groups corresponding to the physiography of the State, primary land use, or unique station types. In addition, a summary of hydrologic conditions in the State including peak discharges, monthly mean discharges, and seven-day low flow is presented.

Open-File Report↗
USGS2004

Hydrogeology and Water Quality of the Pepacton Reservoir Watershed in Southeastern New York. Part 3. Responses of Stream Base-Flow Chemistry to Hydrogeologic Factors and Nonpoint-Sources of Contamination

Base-flow samples were collected seasonally from 20 small streams in the 372-square-mile Pepacton Reservoir watershed to evaluate the effects of hydrogeologic factors and nonpoint sources of contamination on the chemical composition of ground-water discharge. The reservoir provides part of New York City?s water supply. The subbasins represented one of three general types of land use, each with at least 45 percent forested area (mostly on the hillsides): farmed (dairy) land, formerly farmed land with low-density residential development, or forested land with little or no development. The subbasin areas ranged from 0.38 to 10.23 square miles. All streams were sampled in December 2000 and in May, July, and October 2001. Three of the sites were designated as landuse- index sites and were sampled as many as five additional times during the study. No samples exceeded state or federal drinking-water standards for chloride, sodium, nitrate, orthophosphate, herbicides, or herbicide degradates. The chemical composition of base-flow samples was classified into major-ion water types, which were broadly defined as naturally occurring and road-salt-affected water types. About one-third of the base-flow samples were roadsalt- affected types. Natural water types were differentiated as dilute or evolved. Dilute waters have bicarbonate and sulfate as dominant anions and evolved waters have only bicarbonate as a dominant anion. Dilute water types indicate relatively short ground-water residence times or contact with unreactive aquifer material. Evolved waters have either longer ground-water residence time or contact with more reactive aquifer material than dilute ground waters. The larger subbasins with wider valley-bottom areas were more likely to have evolved water types than small subbasins with little floodplain development. Positive correlations between selected constituents and the intensity of nonpoint sources emphasize the connection between land use, shallow ground-water quality, and stream base-flow water quality. Chloride and sodium, which are relatively conservative constituents, showed strong linear relations with annual estimates of road-salt application during all four sampling periods. Nonconservative constituents, such as the nutrients nitrate and orthophosphate, showed linear relations with manure production rate among farmed basins, but only at specific times of the year because of losses through biologic activity. Nitrate showed the strongest relation in winter because losses to biological activity were at a minimum. Orthophosphate showed the strongest relation in early summer, when hydrologic and chemical conditions appear to favor release from sediments. Atmospheric nitrogen deposition is an additional source of nitrogen that can be released from mature or stressed forested basins. Detections of herbicides (atrazine, metolachlor, simazine) and herbicide degradates ( Metolachlor ESA, alachlor ESA, deethylatrazine) in base flow were closely correlated with subbasins in which corn was grown during the study. Atrazine was detected at the farmed index site only in early summer, after application and two rain storms. This detection corresponded to the peak orthophosphate concentration. In contrast, metolachlor ESA was detected in nearly all farmedindex- subbasin samples and peaked in late summer, when percent base-flow contributions from farmed valley-bottom areas were likely highest. The implications of this study are that seasonal and more frequent base-flow surveys of water chemistry from small stream basins can help refine the understanding of local hydrogeologic systems and define the effects of nonpointsource contamination on base-flow water quality. The concentration of most nonpoint sources in valley-bottom or lower-hillside areas helped indicate the relative contributions of water from hillside and valley-bottom areas at different times of year. The positive correlations between the intensity of nonpoint-source activities and nonpoint-source constituents in base flow underscores the link between land use (nonpoint sources), ground-water quality, and surface-water quality.

Scientific Investigations Report↗
USGS1994

Sources of trends in water-quality data for selected streams in Texas, 1975-89 water years

Sources of trends in water-quality data for selected streams in Texas for the 1975-89 water years were investigated in this study. The investigation of sources was confined to distinct geographic patterns in the trend indicators for one constituent or for a group of related constituents. The probable source of trend patterns in nutrients and measures of oxygen in the Trinity River Basin was changes in the wastewater treatment facilities in the Dallas-Fort Worth metropolitan area. A pattern of increased concentrations of inorganic constituents in the upper Colorado River Basin resulted from emergency releases of water from the Natural Darn Lake, a salinity control structure. Trend patterns in inorganic constituents in the Rio Grande Basin were a result of increasing concentrations in the Pecos River and, to a lesser extent, the Rio Grande above the Amistad Reservoir, combined with the effects of reservoir regulation. A pattern of increasing concentrations of organic plus ammonia nitrogen and ammonia nitrogen was detected for the 1975-86 water years for stations with low concentrations (generally less than 5 milligrams per liter) of these nitrogen species. The trends were no longer evident when the period of trend analysis was extended to the 1989 water year. A positive bias in the data caused by the addition of mercuric chloride tablets to preserve nutrient samples during 1980-86 was the probable source of this trend pattern. A pattern of increasing concentrations in dissolved sulfate in the eastern part of the State was a result of a positive bias in the analytical results of a turbidimetric method of sulfate analysis. The source of a statewide pattern of increased pH in streams could not be identified.

Texas↗