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At least 1,621 records · Page 90Linked to original sources

USGS2021

Fire, land cover, and temperature drivers of bat activity in winter

Background Understanding the effects of disturbance events, land cover, and weather on wildlife activity is fundamental to wildlife management. Currently, in North America, bats are of high conservation concern due to white-nose syndrome and wind-energy development impact, but the role of fire as a potential additional stressor has received less focus. Although limited, the vast majority of research on bats and fire in the southeastern United States has been conducted during the growing season, thereby creating data gaps for bats in the region relative to overwintering conditions, particularly for non-hibernating species. The longleaf pine ( Pinus palustris Mill.) ecosystem is an archetypal fire-mediated ecosystem that has been the focus of landscape-level restoration in the Southeast. Although historically fires predominately occurred during the growing season in these systems, dormant-season fire is more widely utilized for easier application and control as a means of habitat management in the region. To assess the impacts of fire and environmental factors on bat activity on Camp Blanding Joint Training Center (CB) in northern Florida, USA, we deployed 34 acoustic detectors across CB and recorded data from 26 February to 3 April 2019, and from 10 December 2019 to 14 January 2020. Results We identified eight bat species native to the region as present at CB. Bat activity was related to the proximity of mesic habitats as well as the presence of pine or deciduous forest types, depending on species morphology ( i.e., body size, wing-loading, and echolocation call frequency). Activity for all bat species was influenced positively by either time since fire or mean fire return interval. Conclusion Overall, our results suggested that fire use provides a diverse landscape pattern at CB that maintains mesic, deciduous habitat within the larger pine forest matrix, thereby supporting the diverse bat community at CB during the dormant season and early spring.

Florida↗

USGS2006

The Amphibian Research and Monitoring Initiative (ARMI): 5-year report

The Amphibian Research and Monitoring Initiative (ARMI) is an innovative, multidisciplinary program that began in 2000 in response to a congressional directive for the Department of the Interior to address the issue of amphibian declines in the United States. ARMI’s formulation was cross-disciplinary, integrating U.S. Geological Survey scientists from Biology, Water, and Geography to develop a course of action (Corn and others, 2005a). The result has been an effective program with diverse, yet complementary, expertise. ARMI’s approach to research and monitoring is multiscale. Detailed investigations focus on a few species at selected local sites throughout the country; monitoring addresses a larger number of species over broader areas (typically, National Parks and National Wildlife Refuges); and inventories to document species occurrence are conducted more extensively across the landscape. Where monitoring is conducted, the emphasis is on an ability to draw statistically defensible conclusions about the status of amphibians. To achieve this objective, ARMI has instituted a monitoring response variable that has nationwide applicability. At research sites, ARMI focuses on studying species/environment interactions, determining causes of observed declines, and developing new techniques to sample populations and analyze data. Results from activities at all scales are provided to scientists, land managers, and policymakers, as appropriate. The ARMI program and the scientists involved contribute significantly to understanding amphibian declines at local, regional, national, and international levels. Within National Parks and National Wildlife Refuges, findings help land managers make decisions applicable to amphibian conservation. For example, the National Park Service (NPS) selected amphibians as a vital sign for several of their monitoring networks, and ARMI scientists provide information and assistance in developing monitoring methods for this NPS effort. At the national level, ARMI has had major exposure at a variety of meetings, including a dedicated symposium at the 2004 joint meetings of the Herpetologists’ League, the American Society of Ichthyologists and Herpetologists, and the Society for the Study of Amphibians and Reptiles. Several principal investigators have brought international exposure to ARMI through venues such as the World Congress of Herpetology in South Africa in 2005 (invited presentation by Dr. Gary Fellers), the Global Amphibian Summit, sponsored by the International Union for Conservation of Nature (IUCN) and Wildlife Conservation International, in Washington, D.C., 2005 (invited participation by Dr. P.S. Corn), and a special issue of the international herpetological journal Alytes focused on ARMI in 2004 (edited by Dr. C.K. Dodd, Jr.). ARMI research and monitoring efforts have addressed at least 7 of the 21 Threatened and Endangered Species listed by the U.S. Fish and Wildlife Service (California red-legged frog [Rana draytonii], Chiricahua leopard frog [R. chiricahuensis], arroyo toad [Bufo californicus], dusky gopher frog [Rana sevosa], mountain yellow-legged frog [R. muscosa], flatwoods salamander [Ambystoma cingulatum], and the golden coqui [Eleutherodactylus jasperi]), and 9 additional species of concern recognized by the IUCN. ARMI investigations have addressed time-sensitive research, such as emerging infectious diseases and effects on amphibians related to natural disasters like wildfire, hurricanes, and debris flows, and the effects of more constant, environmental change, like urban expansion, road development, and the use of pesticides. Over the last 5 years, ARMI has partnered with an extensive list of government, academic, and private entities. These partnerships have been fruitful and have assisted ARMI in developing new field protocols and analytic tools, in using and refining emerging technologies to improve accuracy and efficiency of data handling, in conducting amphibian disease, malformation, and environmental effects research, and in implementing a network of monitoring and research sites. Accomplishments from these endeavors include more than 40 publications on amphibian status and trends, nearly 100 publications on amphibian ecology and causes of declines, and over 30 methodological publications. Several databases have emerged as a result of ARMI and its partnerships; one, a digital atlas of ranges for all U.S. amphibian species, was used by the IUCN to display amphibian distribution maps in the Global Amphibian Assessment Project. Given the scope of ARMI and the panoply of projects, findings have had implications for policy. Investigations that demonstrate amphibian declines or illuminate causes of declines provide valuable information about habitat management, environmental effects, mechanisms for the spread of disease, and human/amphibian interfaces. This information has been made available to land managers, scientists, educators, Congress and other policymakers, and the public. The support afforded ARMI by Congress has been influential in the program’s development and success. The value of ARMI’s efforts will continue to increase as we are able to extend our studies spatially and temporally to answer critical questions with more confidence. We are using ARMI’s resources efficiently and continuing to develop innovative mechanisms for leveraging resources for maximum effectiveness during challenging financial times. This report is a 5-year retrospective of the structure, methodology, progress, and contributions to the broader scientific community that have resulted from this national USGS program. We evaluate ARMI’s success to date, with regard to the challenges faced by the program and the strengths that have emerged. We chart objectives for the next 5 years that build on current accomplishments, highlight areas meriting further research, and direct efforts to overcome existing weaknesses.

Scientific Investigations Report↗

USGS2004

Fish assemblage structure and relations with environmental conditions in a Rocky Mountain watershed

Fish and habitat were sampled from 110 reaches in the Salt River basin (Idaho and Wyoming) during 1996 and 1997 to assess patterns in fish assemblage structure across a Rocky Mountain watershed. We identified four distinct fish assemblages using cluster analysis: (1) allopatric cutthroat trout (Oncorhynchus clarki (Richardson, 1836)); (2) cutthroat trout - brook trout (Salvelinus fontinalis (Mitchell, 1814)) - Paiute sculpin (Cottus beldingi Eigenmann and Eigenmann, 1891); (3) cutthroat trout - brown trout (Salmo trutta L., 1758) - mottled sculpin (Cottus bairdi Girard, 1850); and (4) Cyprinidae-Catostomidae. The distribution of fish assemblages was explained by thermal characteristics, stream geomorphology, and local habitat features. Reaches with allopatric cutthroat trout and the cutthroat trout - brook trout - Paiute sculpin assemblage were located in high-elevation, high-gradient streams. The other two fish assemblages were generally located in low-elevation streams. Associations between habitat gradients, locations of reaches in the watershed, and occurrence of species were further examined using canonical correspondence analysis. The results suggest that stream geomorphology, thermal conditions, and local habitat characteristics influence fish assemblage structure across a Rocky Mountain watershed, and they provide information on the ecology of individual species that can guide conservation activities. ?? 2004 NRC Canada.

Canadian Journal of Zoology↗

USGS2024

Smallmouth buffalo (Ictiobus bubalus Rafinesque) population trends and demographics in the Upper Mississippi River System

Smallmouth buffalo ( Ictiobus bubalus Rafinesque) are a large-bodied fish highly valued and commercially exploited across most of their range. Despite this, relatively little is known of their population demographics compared to other exploited species. To fill these knowledge gaps, we analyzed two independent long-term datasets (30 and 57 years, respectively) and population demographic data (age structure, growth, mortality, age at maturity, and recruitment) from multiple pools of the Upper Mississippi River System (UMRS) and Illinois River (Illinois, USA). Long-term data (30-year dataset) generally show downward trends or significant declines in catch per unit effort in the UMRS, while the 57-year dataset shows a stable trend or a significant increase in the Illinois River. The oldest smallmouth buffalo were estimated to be 39 years old, with nearly every pool sampled having individuals estimated to exceed 30 years of age. Except for Pool 13 of the UMRS, 90% of smallmouth buffalo were estimated to mature between 411 and 470 mm in length or between 8.7 and 11.2 years old. Recruitment was variable: strong year classes were generally preceded by multiple years of weak year classes. Our results indicate that the smallmouth buffalo population may be stable in portions of the UMRS and Illinois River systems, but significant declines in the northern extent of the UMRS may warrant conservation concern. Recent research into ages of buffalofishes shows that consideration should be given to the idea that the UMRS population could be age truncated. Results also emphasize the importance of long-term data and the ability to show changes in exploited populations over time.

Illinois, Iowa, Minnesota, Missouri, Wisconsin↗

USGS2012

Allowable levels of take for the trade in Nearctic songbirds

The take of Nearctic songbirds for the caged-bird trade is an important cultural and economic activity in Mexico, but its sustainability has been questioned. We relied on the theta-logistic population model to explore options for setting allowable levels of take for 11 species of passerines that were subject to legal take in Mexico in 2010. Because estimates of population size necessary for making periodic adjustments to levels of take are not routinely available, we examined the conditions under which a constant level of take might contribute to population depletion (i.e., a population below its level of maximum net productivity). The chance of depleting a population is highest when levels of take are based on population sizes that happen to be much lower or higher than the level of maximum net productivity, when environmental variation is relatively high and serially correlated, and when the interval between estimation of population size is relatively long (≥5 years). To estimate demographic rates of songbirds involved in the Mexican trade we relied on published information and allometric relationships to develop probability distributions for key rates, and then sampled from those distributions to characterize the uncertainty in potential levels of take. Estimates of the intrinsic rate of growth (r) were highly variable, but median estimates were consistent with those expected for relatively short-lived, highly fecund species. Allowing for the possibility of nonlinear density dependence generally resulted in allowable levels of take that were lower than would have been the case under an assumption of linearity. Levels of take authorized by the Mexican government in 2010 for the 11 species we examined were small in comparison to relatively conservative allowable levels of take (i.e., those intended to achieve 50% of maximum sustainable yield). However, the actual levels of take in Mexico are unknown and almost certainly exceed the authorized take. Also, the take of Nearctic songbirds in other Latin American and Caribbean countries ultimately must be considered in assessing population-level impacts.

Ecological Applications↗

USGS2001

Arctic National Wildlife Refuge, 1002 area, petroleum assessment, 1998, including economic analysis

The Alaska National Interest Lands Conservation Act (1980) established the Arctic National Wildlife Refuge (ANWR). In section 1002 of that act, Congress deferred a decision regarding future management of the 1.5-million-acre coastal plain ("1002 area") in recognition of the area’s potentially enormous oil and gas resources and its importance as wildlife habitat. A report on the resources (including petroleum) of the 1002 area was submitted in 1987 to Congress by the Department of the Interior (DOI). Since completion of that report, numerous wells have been drilled and oil fields discovered near ANWR, new geologic and geophysical data have become available, seismic processing and interpretation capabilities have improved, and the economics of North Slope oil development have changed significantly. The U.S. Geological Survey (USGS) commonly is asked to provide the Federal Government with timely scientific information in support of decisions regarding land management, environmental quality, and economic and strategic policy. To do so, the USGS must anticipate issues most likely to be the focus of policymakers in the future. Anticipating the need for scientific information and considering the decade-old perspective of the petroleum resource estimates included in the 1987 Report to Congress, the USGS has reexamined the geology of the ANWR 1002 area and has prepared a new petroleum resource assessment.

Fact Sheet↗

USGS2023

The bee lab

Introduction The U.S. Geological Survey (USGS) Bee Lab is a collaborative interagency joint venture and international leader for bee (Hymenoptera: Apoidea) identification, survey design, quantification of bee and plant interrelations, and development and maintenance of occurrence databases. Each of these objectives supports native bee conservation by providing critical data and tools for the United States and other countries. The Bee Lab is part of the USGS Eastern Ecological Science Center (EESC) and located in Laurel, Maryland, at the U.S. Fish and Wildlife Service (USFWS) Patuxent Research Refuge. The laboratory houses scientists from the EESC, USGS’s Cooperative Fish and Wildlife Research Units, and the USFWS to develop identification tools and survey design support for State, Federal, Tribal, and nongovernment organization partners. In addition to the development of identification tools, important objectives include developing keys for native and nonnative bee species and making those tools accessible to partners and the public. Among the most visible and reused products produced during the development of the tools are the detailed photographs of the bees themselves. Accurate bee identification allows for better monitoring of bee species and examination of environmental factors that may influence their populations.

Fact Sheet↗

USGS2008

Historical and current environmental influences on an endemic great plains fish

Native fishes of the Great Plains are at risk of decline due to disturbances to physical habitat caused by changes in land and water use, as well as shifts in species assemblages driven by the invasion of introduced species with the loss of natives. We used historical and current fish assemblage data in conjunction with current habitat information to assess these influences on an endemic Great Plains stream fish, the plains topminnow (Fundulus sciadicus). Of the 31 sites where the plains topminnow occurred historically (1939-1940), it was found in only seven of those sites in 2003-2005. Our results demonstrate a shift in fish assemblage over time that coincides with the loss of plains topminnow. Changes in fish assemblages were characterized by increases in occurrence of exotic, invasive and generalist species with declines in occurrences of native fishes. An information theoretic approach was used to evaluate candidate models of current fish assemblage and physical/chemical habitat on the presence of the plains topminnow. Candidate models that included both instream habitat (e.g., vegetation coverage, undercut banks) and the native fish species assemblage are important to predicting presence of the plains topminnow within its historic range. Conservation of Great Plains fishes including the plains topminnow will need a combination of habitat protection and enhancement.

American Midland Naturalist↗

USGS2012

Flow-adjusted trends in dissolved selenium load and concentration in the Gunnison and Colorado Rivers near Grand Junction, Colorado, water years 1986--2008

As a result of elevated selenium concentrations, many western Colorado rivers and streams are on the U.S. Environmental Protection Agency 2010 Colorado 303(d) list, including the main stem of the Colorado River from the Gunnison River confluence to the Utah border. Selenium is a trace metal that bioaccumulates in aquatic food chains and can cause reproductive failure, deformities, and other adverse impacts in birds and fish, including several threatened and endangered fish species. Salinity in the upper Colorado River has been the focus of source-control efforts for many years. Although salinity loads and concentrations have been previously characterized at the U.S. Geological Survey (USGS) streamflow-gaging stations at the Gunnison River near Grand Junction, Colo., and at the Colorado River near the Colorado-Utah State line, trends in selenium load and concentration at these two stations have not been studied. The USGS, in cooperation with the Bureau of Reclamation and the Colorado River Water Conservation District, evaluated dissolved selenium (herein referred to as "selenium") load and concentration trends at these two sites to inform decision makers on the status and trends of selenium. This report presents results of the evaluation of trends in selenium load and concentration for two USGS streamflow-gaging stations: the Gunnison River near Grand Junction, Colo. ("Gunnison River site"), USGS site 09152500, and the Colorado River near Colorado-Utah State line ("Colorado River site"), USGS site 09163500. Flow-adjusted selenium loads were estimated for the beginning water year (WY) of the study, 1986, and the ending WY of the study, 2008. The difference between flow-adjusted selenium loads for WY 1986 and WY 2008 was selected as the method of analysis because flow adjustment removes the natural variations in load caused by changes in mean-daily streamflow, emphasizing human-caused changes in selenium load and concentration. Overall changes in human-caused effects in selenium loads and concentrations during the period of study are of primary interest to the cooperators. Selenium loads for each of the 2 water years were calculated by using normalized mean-daily streamflow, measured selenium concentration, standard linear regression techniques, and data previously collected at the two study sites. Mean-daily streamflow was normalized for each site by averaging the daily streamflow for each day of the year over the 23-year period of record. Thus, for the beginning and ending water years, estimations could be made of loads that would have occurred without the effect of year-to-year streamflow variation. The loads thus calculated are illustrative of the change in loads between water years 1986 and 2008, and are not the actual loads that occurred in those 2 water years. The estimated 50th and 85th percentile selenium concentrations associated with the selenium loads were also calculated for WY 1986 and WY 2008 at each site. Time-trends in selenium concentration at the two sites were charted by using regression techniques for partial residuals for the entire study period (WY 1986 through WY 2008). Annual selenium load for the Gunnison River site was estimated to be 23,196 pounds for WY 1986 and 16,560 pounds for WY 2008, a 28.6 percent decrease. Lower and upper 95-percent confidence levels for WY 1986 annual load were 22,360 and 24,032 pounds. Lower and upper 95-percent confidence levels for WY 2008 annual load were 15,724 and 17,396 pounds. Estimated 50th percentile daily selenium concentrations decreased from 6.41 to 4.57 micrograms/liter from WY 1986 to WY 2008, whereas estimated 85th percentile daily selenium concentrations decreased from 7.21 to 5.13 micrograms/liter from WY 1986 to WY 2008. Annual selenium load for the Colorado River site was estimated to be 56,587 pounds for WY 1986 and 34,344 pounds for WY 2008, a 39.3 percent decrease. Lower and upper 95-percent confidence levels for WY 1986 annual load were 53,785 and 59,390 pounds. Lower and upper 95-percent confidence levels for WY 2008 annual load were 31,542 and 37,147 pounds. Estimated 50th percentile daily selenium concentrations decreased from 6.44 to 3.86 micrograms/liter from WY 1986 to WY 2008, whereas estimated 85th percentile daily selenium concentrations decreased from 7.94 to 4.72 micrograms/liter from WY 1986 to WY 2008.

Colorado↗

USGS2021

A new remote sensing-based Carbon Sequestration Potential Index (CSPI): A tool to support land carbon management

Integrating remote sensing into assessments of carbon stocks and fluxes has advanced our understanding of how global change affects landscapes and our capacity to support decision making about forest management. However, there remains a lack of detailed and actionable analyses conducted across widely ranging environmental conditions that are appropriate for tactical planning. We used airborne laser scanning data and multi-source satellite imagery to estimate forest aboveground carbon density and gross primary production, and to map forest cover across the main Hawaiian Islands. We used these measures to develop the Carbon Sequestration Potential Index (CSPI), which identifies where the potential for carbon sequestration following afforestation would be highest within a complex landscape of 304 management units. Variation in CSPI was high across islands and between ecosystems, with low values for cool, dry and largely intact forest systems and high values for warm, wet and largely non-forested systems. The CSPI provided a rapid, spatially-explicit and actionable assessment of Hawaiian forest reserves, which can help stewardship agencies contribute to state carbon neutrality goals through climate-smart and science-driven prescriptions that encompass conservation to restoration.

Hawaii↗

USGS2022

Potential effects of energy development on environmental resources of the Williston Basin in Montana, North Dakota, and South Dakota

About this volume The Williston Basin, which includes parts of Montana, North Dakota, and South Dakota in the United States, has been a leading domestic oil and gas producing area. To better understand the potential effects of energy development on environmental resources in the Williston Basin, the U.S. Geological Survey, in cooperation with the Bureau of Land Management, and in support of the needs identified by the Bakken Federal Executive Group (consisting of representatives from 13 Federal agencies and Tribal groups), began work to synthesize existing information on science topics to support management decisions related to energy development. This report is divided into four chapters (A–D). Chapter A provides an executive summary of the report and principal findings from chapters B–D. Chapter B provides a brief compilation of information regarding the history of energy development, physiography, climate, land use, demographics, and related studies in the Williston Basin. Chapter C synthesizes current information about water resources, identifies potential effects from energy development, and summarizes water resources research and information needs in the Williston Basin. Chapter D summarizes information about ecosystems, species of conservation concern, and potential effects to those species from energy development in the Williston Basin.

Montana, North Dakota, South Dakota↗

USGS2023

Development of a quantitative PCR assay for detecting northwest salamander (ambystoma gracile) in environmental DNA samples

We developed a primer and probe based quantitative PCR assay for use with environmental DNA to detect Northwest salamander ( Ambystoma gracile ), a species endemic to the temperate Pacific coastal region of North America. The assay targets a region in the mitochondrial DNA (mtDNA) D-loop gene. Tests of the assay were performed in silico (using the NCBI BLAST tool), in vitro (using DNA extracted from A. gracile and related species) and in situ (water samples collected from a lake with a known population of A. gracile ). This assay will be useful in efforts to monitor the distribution and occupancy of this species.

Conservation Genetics Resources↗

USGS2003

Application of adaptive cluster sampling to low-density populations of freshwater mussels

Freshwater mussels appear to be promising candidates for adaptive cluster sampling because they are benthic macroinvertebrates that cluster spatially and are frequently found at low densities. We applied adaptive cluster sampling to estimate density of freshwater mussels at 24 sites along the Cacapon River, WV, where a preliminary timed search indicated that mussels were present at low density. Adaptive cluster sampling increased yield of individual mussels and detection of uncommon species; however, it did not improve precision of density estimates. Because finding uncommon species, collecting individuals of those species, and estimating their densities are important conservation activities, additional research is warranted on application of adaptive cluster sampling to freshwater mussels. However, at this time we do not recommend routine application of adaptive cluster sampling to freshwater mussel populations. The ultimate, and currently unanswered, question is how to tell when adaptive cluster sampling should be used, i.e., when is a population sufficiently rare and clustered for adaptive cluster sampling to be efficient and practical? A cost-effective procedure needs to be developed to identify biological populations for which adaptive cluster sampling is appropriate.

Environmental and Ecological Statistics↗

USGS2021

Anthropogenic edge effects in habitat selection by sun bears in a protected area

Wildlife populations in southeast Asia are increasingly experiencing a broad array of anthropogenic threats, and mammalian carnivores are particularly vulnerable. Populations of the Malayan sun bear Helarctos malayanus are estimated to have declined by 30% over the last 30 years from forest conversion to industrial plantations and mortality associated with human–bear conflicts and illegal wildlife trade. However, the effects of industrial plantations on habitat selection and activity patterns of mammals that live at the protected area-plantation interface, including sun bears, are not well known. We investigated habitat selection and activity patterns of sun bears in Tabin Wildlife Reserve in Sabah, Malaysia. We deployed 83 remote camera sites to record sun bear detections during two sampling periods (2012–2013 and 2017). We used generalized linear models to examine relationships between sun bear presence and site covariates representing physical, environmental and anthropogenic elements of the landscape. Relative probability of sun bear presence was positively associated with distance to roads and elevation. Because most roads were on the reserve boundary and often associated with oil palm plantations, proximity to roads likely served as a surrogate measure of human accessibility and activity in peripheral areas of the reserve. Supporting that interpretation, sun bears close to the reserve boundary were primarily active at night, whereas daytime activity was more common for bears in the interior. Our findings indicate that sun bears alter behaviour and habitat selection likely in response to anthropogenic activities at the edges of Tabin Wildlife Reserve (112 200 ha). Because the ratio of edge to interior increases steeply with declining habitat area, smaller protected areas bordered by plantations are predicted to have greater impacts on sun bear behaviour and, potentially, population persistence. Effective conservation actions may benefit from management to improve the security of edge habitats for sun bears and other vulnerable species.

Tabin Wildlife Reserve↗

USGS2014

USGS ecosystem research for the next decade: advancing discovery and application in parks and protected areas through collaboration

Ecosystems within parks and protected areas in the United States and throughout the world are being transformed at an unprecedented rate. Changes associated with natural hazards, greenhouse gas emissions, and increasing demands for water, food, land, energy and mineral resources are placing urgency on sound decision making that will help sustain our Nation’s economic and environmental well-being (Millennium Ecosystem Assessment, 2005). In recognition of the importance of science in making these decisions, the U.S. Geological Survey (USGS) in 2007 identified ecosystem science as one of six science directions included in a comprehensive decadal strategy (USGS 2007). The Ecosystems Mission Area was identified as essential for integrating activity within the USGS and as a key to enhanced integration with other Federal and private sector research and management organizations (Myers at al., 2007). This paper focuses on benefits to parks and protected areas from the USGS Ecosystems Mission Area plan that expanded the scope of the original 2007 science strategy, to identify the Bureau’s work in ecosystem science over the next decade (Williams et al., 2013). The plan describes a framework that encompasses both basic and applied science and allows the USGS to continue to contribute meaningfully to conservation and management issues related to the Nation’s parks and ecological resources. This framework relies on maintaining long-standing, collaborative relationships with partners in both conducting science and applying scientific results. Here we summarize the major components of the USGS Ecosystems Science Strategy, articulating the vision, goals and strategic approaches, then outlining some of the proposed actions that will ultimately prove useful to those managing parks and protected areas. We end with a discussion on the future of ecosystem science for the USGS and how it can be used to evaluate ecosystem change and the associated consequences to management of our Nation’s natural resources.

The George Wright Forum↗

USGS1986

Results of a preimpoundment water-quality study of Swatara Creek, Pennsylvania

The water quality of Swatara Creek prior to impoundment by the proposed Swatara Creek Reservoir in south-central Pennsylvania was studied from July 1981 through October 1982. The report, done in cooperation with the Pennsylvania Department of Environmental Resources (PaDER), Bureau of State Parks, presents information on existing water-quality conditions. A discussion of possible water-quality conditions in and downstream from the planned impoundment is also included. Precipitation measured near the study area at Lebanon, Pennsylvania from October 1981 through September 1982 was 8 percent below normal. Streamflow for the same period at Swatara Creek at Harper Tavern just downstream from the study area was 15 percent below the average annual flow. Swatara Creek above Highway 895 has been degraded by acid mine drainage. The main inflow to the planned impoundment has 2.1 times the discharge of Lower Little Swatara Creek--a forested and agricultural basin that is also tributary to the proposed impoundment. During the 1982 water year, 17,400 tons of suspended sediment were transported from the study area. About 46 percent of the annual load was transported during 3 days of high flow. Inflows to the planned impoundment from both Lower Little Swatara Creek and Swatara Creek above Highway 895 were poorly buffered. Measured concentrations of alkalinity and acidity were usually less than 10 mg/L (milligrams per liter) and 5 mg/L as CaCO3, respectively. The inflows contain high concentrations of nutrients and metals that would probably stratify in a reservoir. Maximum concentrations of dissolved nitrate and total phosphorus were 2.6 mg/L and 0.31 mg/L, respectively. At Lower Little Swatara Creek; these concentrations are well above those needed for growth of algae. Maximum observed concentrations for total recoverable iron, aluminum, and manganese at Swatara Creek above Highway 895 at Pine Grove were 100,000 ug/L (micrograms per liter), 66,000 ug/L, and 2,300 ug/L, respectively. Large increases in metal concentrations along with simultaneous decreases in pH and increases in acidity confirm that mine drainage continues to degrade the water quality of Swatara Creek and may have a large impact on water quality of the planned impoundment. Iron, lead, copper, and zinc concentrations periodically exceeded the U.S. Environmental Protection Agency (U.S. EPA) criteria for freshwater aquatic life. Concentrations of manganese and lead also exceeded the U.S. EPA criteria for domestic water supplies and human health, respectively. The water quality of the Swatara Creek Reservoir will depend on characteristics such as (1) the detention time of water in the lake, (2) the timing and extent of thermal and chemical stratification, (3) sedimentation, and (4) the chemical loading and concentrations in the lake. Each of these characteristics may depend in part, on streamflow. The impoundment will act as a sediment trap and thus reduce the concentrations of total phosphorus, iron, aluminum, lead, copper, and zinc immediately downstream from the impoundment. Large storm discharges and releases from the hypolimnion of the reservoir to attain the winter-pool level may contain low oxygen concentrations and elevated concentrations of iron, aluminum, lead, copper, and zinc. Unless conservation releases from the multi-level release gates are carefully controlled, low dissolved-oxygen levels and high metal concentrations may degrade the downstream water quality and be detrimental to the aquatic community.

Pennsylvania↗

USGS2023

DNA virome composition of two sympatric wild felids, bobcat (Lynx rufus) and puma (Puma concolor) in Sonora, Mexico

With viruses often having devastating effects on wildlife population fitness and wild mammals serving as pathogen reservoirs for potentially zoonotic diseases, determining the viral diversity present in wild mammals is both a conservation and One Health priority. Additionally, transmission from more abundant hosts could increase the extinction risk of threatened sympatric species. We leveraged an existing circular DNA enriched metagenomic dataset generated from bobcat ( Lynx rufus , n = 9) and puma ( Puma concolor , n = 13) scat samples non-invasively collected from Sonora, Mexico, to characterize fecal DNA viromes of each species and determine the extent that viruses are shared between them. Using the metaWRAP pipeline to co-assemble viral genomes for comparative metagenomic analysis, we observed diverse circular DNA viruses in both species, including circoviruses, genomoviruses, and anelloviruses. We found that differences in DNA virome composition were partly attributed to host species, although there was overlap between viruses in bobcats and pumas. Pumas exhibited greater levels of alpha diversity, possibly due to bioaccumulation of pathogens in apex predators. Shared viral taxa may reflect dietary overlap, shared environmental resources, or transmission through host interactions, although we cannot rule out species-specific host-virus coevolution for the taxa detected through co-assembly. However, our detection of integrated feline foamy virus (FFV) suggests Sonoran pumas may interact with domestic cats. Our results contribute to the growing baseline knowledge of wild felid viral diversity. Future research including samples from additional sources (e.g., prey items, tissues) may help to clarify host associations and determine the pathogenicity of detected viruses.

Sonora↗

USGS2010

Status of the California condor (Gymnogyps californianus) and efforts to achieve its recovery

The California Condor ( Gymnogyps californianus ; hereafter "condor"; Fig. 1) has long been symbolic of avian conservation in the United States. Its large size, inquisitiveness, and association with remote places make it highly charismatic, and its decline to the brink of extinction aroused a continuing public interest in its plight. By 1982, only 22 individuals remained of this species whose range once encompassed much of North America. The last wild bird was trapped and brought into captivity in 1987, which rendered the species extinct in the wild (Snyder and Snyder 1989). In the 1980s, some questioned whether viable populations could ever again exist in the natural environment, and whether limited conservation funds should be expended on what they viewed as a hopeless cause (Pitelka 1981). Nevertheless, since that low point, a captive-breeding and release program has increased the total population by an order of magnitude, and condors fly free again in California, Arizona, Utah, and Baja California, Mexico (Fig. 2). At this writing (summer 2009), more than 350 condors exist, 180 of which are in the wild (J. Grantham pers. comm.). The free-living birds face severe challenges, however, and receive constant human assistance. The intensive management applied to the free-living populations, as well as the ongoing monitoring and captive-breeding programs, are tremendously expensive and become more so as the population grows. Thus, the program has reached a crossroads, caught between the financial and logistical pressures required to maintain an increasing number of condors in the wild and the environmental problems that preclude establishment of naturally sustainable, free-ranging populations.

The Auk↗