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USGS1969

Geologic Settings of Subsidence

This paper reviews the role of geologic processes that contribute to subsidence in order to aid those starting investigations of ground-surface subsidence. Subsidence occurs, or at least is discovered, only infrequently, and little organized information has been available. In order to assess our present state of knowledge, the author gathered fragmentary bits of information from many sources widely scattered in the literature of geology and other earth sciences. The author cites examples for each geologic process that is a potential contributor to ground-surface subsidence together with geologic evidence for diagnosing their causes. The geologic processes involved are: (1) solution of gypsum and salt and redistribution of transient fill materials through solution cavities in calcareous rocks; (2) underground erosion of uncemented or lightly cemented silt and sand through temporary underground passageways; (3) lateral plastic flow of salt, gypsum and anhydrite, shale, and clay under loading; (4) compaction of sediments by loading, drainage, vibration, and hydrocompaction; (5) tectonic movements including primary and secondary effects of earthquakes, folding, and warping; and (6) volcanic activity. Because the first four processes may be accelerated by various engineering activities, examples have been selected to illustrate subsidence both under natural conditions and under conditions modified by man's activities. Although this extensive search for existing information on the role of geologic factors in subsidence indicates that much detailed work remains to be done, the future prospects for advancing our geologic knowledge are excellent. Methods of measuring ground-surface displacements are improving rapidly. Also, broadly based investigations of known areas of major subsidence throughout the world are developing new methods of diagnosis and treatment and are yielding quantitative data that will aid our evaluation of the rates and magnitude of present-day geologic processes.

Book chapter↗

USGS1977

Ground-water supplies in the Murfreesboro area, Tennessee

Ground water occurs in the Murfreesboro area in solution openings in the otherwise dense paleozoic limestones that underlie most of central Tennessee. Test drilling based on conceptual models of ground-water occurrence in carbonate-rock aquifers indicate that multimillion-gallon-per-day supplies could be developed from strategically located production wells in the Shiloh and Overall Creek localities. The Shiloh locality which encompasses an elongated synclinal depression in the bedrock has the potential to supply 5 to 8 million gallons per day. The Overall Creek locality which straddles a joint-oriented lineament has the potential to supply 3 to 6 million gallons per day. Some local springs could be used as a supplemental source of potable water, but storage facilities would be needed to offset poorly sustained flows during dry periods. An exception is Fox Camp Spring which appears to be a natural well. The quality of ground water in the Murfreesboro area is typically hard, moderately mineralized and moderately to highly alkaline. Although the shallowest aquifers are subject to bacterial contamination from the land surface, aquifers beneath a depth of 100 feet are prone to yield potable water. (Woodard-USGS)

Tennessee↗

USGS1980

The heliothermic lake: a direct method of collecting and storing solar energy

Heliothermic lakes contain a sun-heated layer of warm, saline water beneath a surface layer of cooler, less saline water. The two layers are separated by a chemocline, a stratum in which salinity increases progressively with depth. The chemocline, the position of which varies from lake to lake, functions as a heat trap. Most sunlight that penetrates this stratum is transformed into heat, which cannot escape by radiation because water is opaque to infrared light, and which cannot escape by convection because the specific gravity of the dense water below the chemocline is not significantly decreased by the increasing temperature. Heat can escape only by conduction through the chemocline, and water or brine is a very poor conductor. As a result, the temperature within and commonly below the chemocline rises. Under ideal conditions of a clear solution, high isolation, and a suitable salinity distribution, the temperature of the chemocline will increase to the boiling point. The lower part of the chemocline in a shallow (0.8-m) manmade heliothermic lake at Sedom, Israel, for example, reached a temperature of 96°C (205°F) in spite of a brine with poor light transmissibility. About 30 natural heliothermic lakes have been reported. The best known, Lake Ursului, occurs in Transylvania, Romania (latitude, 46°35'N). During four consecutive summers, 1899 to 1902, this lake had temperatures of 60-70°C (140-158°F) at a depth of 1-2 m. Heliothermic conditions have persisted in this lake for at least 28 and probably for more than 77 years. The most unusual, Lake Vanda, Victoria Land, Antarctica (latitude, 77°35'S), has a temperature of 26°C near the base of the chemocline at a depth of 61 despite a mean atmospheric temperature of -20°C. Sunlight penetrates into the chemocline through 5 m of remarkably clear ice. Maintenance of the chemocline is the chief problem preventing commercial use of manmade heliothermic lakes for the collection and storage of solar energy. The most effective means of preserving this stratum from destruction by diffusion and wind mixing may be the use of salts, such as sodium sulfate and sodium borate, whose solubilities are markedly influenced by temperature. The chemoclines of ponds constructed with such salts, in theory, would persist indefinitely and could be of great size.

Open-File Report↗

USGS2024

Unravelling spatial heterogeneity of inundation pattern domains for 2D analysis of fluvial landscapes and drainage networks

Fluvial landscape analysis is an essential part of geomorphology, hydrology, ecology, and cartography. It is traditionally focused on the transition between hillslopes and channel domain, in which the network drainage is represented by static flow lines. However, the natural fluctuations of the processes occurring in the watershed induce lateral and longitudinal expansions and contractions in the drainage patterns and variations of stream surface area. These dynamics can be better understood by introducing a two-dimensional (2D) view of catchment hydrography, in which river width and floodplain are included in the analysis. The novelty introduced in this work is the development of a hydrodynamic hierarchical framework (HHF) to analyse the transitions among geomorphic and hydrographic features of the fluvial landscape, distinguishing hillslope, unchanneled valleys, floodplains, and single/multithreads channels. HHF is based on the estimation of nested inundation pattern domains (IPDs) from digital elevation models and 2D hydrodynamic modeling. IPDs are defined by scaling laws that characterize log–log relations between watershed drainage density and unit discharge thresholds extracted from a 2D direct rainfall method (DRM) under steady state solutions. The physical significance of the IPDs is analysed within the context of both the physiographic features of the fluvial landscape and the rainfall rates employed as input for the modeling approach. Initially, the spatial heterogeneity of the IPDs is used to derive stream width metrics as a function of the rainfall rate. Then, a spatial index, representative of the IPDs' heterogeneity, is introduced as a measure of the susceptibility of the drainage network surface area to expansion and contraction. Finally, the consistency of the results is assessed in comparison to another hydrodynamic-based method for fluvial landscape analysis recently proposed in the literature. The proposed approach is analysed using challenging mountain and low-relief environments, characterized by multithread channels, meander cut-offs, oxbow lakes, and extreme landscapes that feature glacial outwash, permafrost, and peatlands.

Alaska↗

USGS2008

Characterization of calcium isotopes in natural and synthetic barite

The mineral barite (BaSO4) accommodates calcium in its crystal lattice, providing an archive of Ca-isotopes in the highly stable sulfate mineral. Holocene marine (pelagic) barite samples from the major ocean basins are isotopically indistinguishable from each other (??44/40Ca = -2.01 ?? 0.15???) but are different from hydrothermal and cold seep barite samples (??44/40Ca = -4.13 to -2.72???). Laboratory precipitated (synthetic) barite samples are more depleted in the heavy Ca-isotopes than pelagic marine barite and span a range of Ca-isotope compositions, ??44/40Ca = -3.42 to -2.40???. Temperature, saturation state, a Ba2 + / a SO42 -, and aCa2+/aBa2+ each influence the fractionation of Ca-isotopes in synthetic barite; however, the fractionation in marine barite samples is not strongly related to any measured environmental parameter. First-principles lattice dynamical modeling predicts that at equilibrium Ca-substituted barite will have much lower 44Ca/40Ca than calcite, by -9??? at 0 ??C and -8??? at 25 ??C. Based on this model, none of the measured barite samples appear to be in isotopic equilibrium with their parent solutions, although as predicted they do record lower ??44/40Ca values than seawater and calcite. Kinetic fractionation processes therefore most likely control the extent of isotopic fractionation exhibited in barite. Potential fractionation mechanisms include factors influencing Ca2+ substitution for Ba2+ in barite (e.g. ionic strength and trace element concentration of the solution, competing complexation reactions, precipitation or growth rate, temperature, pressure, and saturation state) as well as nucleation and crystal growth rates. These factors should be considered when investigating controls on isotopic fractionation of Ca2+ and other elements in inorganic and biogenic minerals. ?? 2008 Elsevier Ltd.

Geochimica et Cosmochimica Acta↗

USGS2014

The behavioural response of adult Petromyzon marinus to damage-released alarm and predator cues

Using semi‐natural enclosures, this study investigated (1) whether adult sea lamprey Petromyzon marinus show avoidance of damage‐released conspecific cues, damage‐released heterospecific cues and predator cues and (2) whether this is a general response to injured heterospecific fishes or a specific response to injured P. marinus . Ten replicate groups of 10 adult P. marinus , separated by sex, were exposed to one of the following nine stimuli: deionized water (control), extracts prepared from adult P. marinus , decayed adult P. marinus (conspecific stimuli), sympatric white sucker Catostomus commersonii , Amazon sailfin catfish Pterygoplichthys pardalis (heterospecific stimuli), 2‐phenylethylamine (PEA HCl) solution, northern water snake Nerodia sipedon washing, human saliva (predator cues) and an adult P. marinus extract and human saliva combination (a damage‐released conspecific cue and a predator cue). Adult P. marinus showed a significant avoidance response to the adult P. marinus extract as well as to C. commersonii , human saliva, PEA and the adult P. marinus extract and human saliva combination. For mobile P. marinus , the N. sipedon washing induced behaviour consistent with predator inspection. Exposure to the P. pardalis extract did not induce a significant avoidance response during the stimulus release period. Mobile adult female P. marinus showed a stronger avoidance behaviour than mobile adult male P. marinus in response to the adult P. marinus extract and the adult P. marinus extract and human saliva combination. The findings support the continued investigation of natural damage‐released alarm cue and predator‐based repellents for the behavioural manipulation of P. marinus populations in the Laurentian Great Lakes.

Journal of Fish Biology↗

USGS1987

A review of surface-water sediment fractions and their interactions with persistent manmade organic compounds

This paper reviews the suspended and surficial sediment fractions and their interactions with manmade organic compounds. The objective of this review is to isolate and describe those contaminant and sediment properties that contribute to the persistence of organic compounds in surface-water systems. Most persistent, nonionic organic contaminants, such as the chlorinated insecticides and polychlorinated biphenyls (PCBs), are characterized by low water solubilities and high octanol-water partition coefficients. Consequently, sorptive interactions are the primary transformation processes that control their environmental behavior. For nonionic organic compounds, sorption is primarily attributed to the partitioning of an organic contaminant between a water phase and an organic phase. Partitioning processes play a central role in the uptake and release of contaminants by sediment organic matter and in the bioconcentration of contaminants by aquatic organisms. Chemically isolated sediment fractions show that organic matter is the primary determinant of the sorptive capacity exhibited by sediment. Humic substances, as dissolved organic matter, contribute a number of functions to the processes cycling organic contaminants. They alter the rate of transformation of contaminants, enhance apparent water solubility, and increase the carrying capacity of the water column beyond the solubility limits of the contaminant. As a component of sediment particles, humic substances, through sorptive interactions, serve as vectors for the hydrodynamic transport of organic contaminants. The capabilities of the humic substances stem in part from their polyfunctional chemical composition and also from their ability to exist in solution as dissolved species, flocculated aggregates, surface coatings, and colloidal organomineral and organometal complexes. The transport properties of manmade organic compounds have been investigated by field studies and laboratory experiments that examine the sorption of contaminants by different sediment size fractions. Field studies indicate that organic contaminants tend to sorb more to fine-grained sediment, and this correlates significantly with sediment organic matter content. Laboratory experiments have extended the field studies to a wider spectrum of natural particulates and anthropogenic compounds. Quantitation of isotherm results allows the comparison of different sediment sorbents as well as the estimation of field partition coefficients from laboratory-measured sediment and contaminant properties. Detailed analyses made on the basis of particle-size classes show that all sediment fractions need to be considered in evaluating the fate and distribution of manmade organic compounds. This conclusion is based on observations from field studies and on the variety of natural organic sorbents that demonstrate sorptive capabilities in laboratory isotherm experiments.

Circular↗

USGS2007

Geological assessment of cores from the Great Bay National Wildlife Refuge, New Hampshire

Geological sources of metals (especially arsenic and zinc) in aquifer bedrock were evaluated for their potential to contribute elevated values of metals to ground and surface waters in and around Rockingham County, New Hampshire. Ayotte and others (1999, 2003) had proposed that arsenic concentrations in ground water flowing through bedrock aquifers in eastern New England were elevated as a result of interaction with rocks. Specifically in southeastern New Hampshire, Montgomery and others (2003) established that nearly one-fifth of private bedrock wells had arsenic concentrations that exceed the U.S. Environmental Protection Agency (EPA) maximum contamination level for public water supplies. Two wells drilled in coastal New Hampshire were sited to intersect metasedimentary and metavolcanic rocks in the Great Bay National Wildlife Refuge. Bulk chemistry, mineralogy, and mineral chemistry data were obtained on representative samples of cores extracted from the two boreholes in the Kittery and Eliot Formations. The results of this study have established that the primary geologic source of arsenic in ground waters sampled from the two well sites was iron-sulfide minerals, predominantly arsenic-bearing pyrite and lesser amounts of base-metal-sulfide and sulfosalt minerals that contain appreciable arsenic, including arsenopyrite, tetrahedrite, and cobaltite. Secondary minerals containing arsenic are apparently limited to iron-oxyhydroxide minerals. The geologic source of zinc was sphalerite, typically cadmium-bearing, which occurs with pyrite in core samples. Zinc also occurred as a secondary mineral in carbonate form. Oxidation of sulfides leading to the liberation of acid, iron, arsenic, zinc, and other metals was most prevalent in open fractures and vuggy zones in core intervals containing zones of high transmissivity in the two units. The presence of significant calcite and lesser amounts of other acid-neutralizing carbonate and silicate minerals, acting as a natural buffer to reduce acidity, forced precipitation of iron-oxyhydroxide minerals and the removal of trace elements, including arsenic and lead, from ground waters in the refuge. Zinc may have remained in solution to a greater extent because of complexing with carbonate and its solubility in near-neutral ground and surface waters. The regional link between anomalously high arsenic contents in ground water and a bedrock source as established by Ayotte and others (1999, 2003) and Montgomery and others (2003) was confirmed by the presence of some arsenic-bearing minerals in rocks of the Kittery and Eliot Formations. The relatively low amounts of arsenic and metals in wells in the Great Bay National Wildlife Refuge as reported by Ayotte and others (U.S. Geological Survey Water Resources Data, 2005) were likely controlled by local geochemical environments in partially filled fractures, fissures, and permeable zones within the bedrock formations. Carbonate and silicate gangue minerals that line fractures, fissures, and permeable zones likely limited the movement of arsenic from bedrock to ground water. Sources other than the two geologic formations might have been required to account for anomalously high arsenic contents measured in private bedrock aquifer wells of Rockingham County.

New Hampshire↗

USGS2012

Imaging with cross-hole seismoelectric tomography

We propose a cross-hole imaging approach based on seismoelectric conversions (SC) associated with the transmission of seismic waves from seismic sources located in a borehole to receivers (electrodes) located in a second borehole. The seismoelectric (seismic-to-electric) problem is solved using Biot theory coupled with a generalized Ohm's law with an electrokinetic streaming current contribution. The components of the displacement of the solid phase, the fluid pressure, and the electrical potential are solved using a finite element approach with Perfect Match Layer (PML) boundary conditions for the seismic waves and boundary conditions mimicking an infinite material for the electrostatic problem. We develop an inversion algorithm using the electrical disturbances recorded in the second borehole to localize the position of the heterogeneities responsible for the SC. Because of the ill-posed nature of the inverse problem (inherent to all potential-field problems), regularization is used to constrain the solution at each time in the SC-time window comprised between the time of the seismic shot and the time of the first arrival of the seismic waves in the second borehole. All the inverted volumetric current source densities are aggregated together to produce an image of the position of the heterogeneities between the two boreholes. Two simple synthetic case studies are presented to test this concept. The first case study corresponds to a vertical discontinuity between two homogeneous sub-domains. The second case study corresponds to a poroelastic inclusion (partially saturated by oil) embedded into an homogenous poroelastic formation. In both cases, the position of the heterogeneity is recovered using only the electrical disturbances associated with the SC. That said, a joint inversion of the seismic and seismoelectric data could improve these results.

Geophysical Journal International↗

USGS1969

Experimental studies of pegmatite genesis: I. A model for the derivation and crystallization of granitic pegmatites

The genesis of granitic igneous pegmatites is here considered in terms of a model conceived from results of field and laboratory studies and subsequently tested by means of experimental investigations. This model emphasizes the roles of water (and/or other relatively volatile substances), both as a dissolved constituent in granitic magmas and as the dominant constituent of a separate fluid phase that is in the supercritical state under most conditions of pegmatite formation. Pegmatite magma, as distinguished by a content of dissolved water that is high relative to the limit of solubility under existing confining pressure, can be formed either through partial melting of crustal materials or as rest-liquid in a cooling igneous body yielding dominantly anhydrous crystalline phases. Such granitic magma can be expected to consolidate according to the following three-fold sequence: 1. Crystallization from hydrous silicate melt, yielding anhydrous solid phases with or without OH-bearing phases. The product is characterized by normal phaneritic textures that generafly are coarse grained. It has been termed pegmatite in some occurrences, and granite in others. 2. Crystallization concomitantly from silicate melt and from a coexisting exsolved aqueous fluid of considerably lower viscosity, yielding giant-textured pegmatite along with much finer-grained, even aplitic, mineral aggregates. Segregation of these products can vary enormously in scale and degree. Partitioning of constituents between melt and aqueous fluid, rapid diffusion of constituents through the aqueous phase, and gravitational rising of this fluid through the system contribute to formation of pods, zones, and other rock units of unusual composition and texture. 3. Crystallization in the absence of silicate melt, yielding a wide variety of late-stage products. These include so-called "pocket minerals" and numerous mineral aggregates formed through exchanges of material among aqueous fluid and earlier-formed crystal-line phases. Development of pegmatite bodies can begin with either Step 1 or Step 2, but it is suggested that the processes involved in Step 2 are essential to the formation of all true pegmatites of igneous origin. The appearance of a second fluid phase, in general a supercritical aqueous fluid derived from the crystallizing melt, is regarded as the decisive event; it is promptly followed by fundamental changes in distribution and texture of the solid phases being formed. The processes can operate effectively in a fully closed system, and they also can modify the surrounding rocks if the system is open at any stage. Step 1 can include reactions between magma and earlier-formed crystals, but far more rapid and extensive exchanges of materials are subsequently effected by processes included in Steps 2 and 3; indeed, such exchanges also can account satisfactorily for pegmatites of metamorphic origin. Crystallization of most granitic magmas in the absence of a separate aqueous phase probably would begin within the temperature range 1,300°-650 ° C, the specific liquidus temperature depending mainly upon the amounts of volatile constituents held in solution at the time. This compositional factor also would be important in controlling the stage of crystallization-late, intermediate, or early-at which a separate aqueous fluid would make its appearance. Depending upon confining pressure as dictated by geologic conditions for a given system, the stage in crystallization represented by the presence of both silicate melt and aqueous fluid could begin within about the same temperature range of 1.300°-650 ° C. Exhaustion of the melt could occur within range extending downward to temperatures of 600C or even somewhat lower. Textural and structural features appear to be the most reliable indicators of the stages and fundamental processes involved in crystallization of both natural and synthetic pegmatites. The contrasting processes of crystallization from one fluid and from more than one fluid can operate over such broad P-T-X ranges that simple genetic pegmatite classifications based largely upon "key minerals," presumed temperature or pressure intervals, or the presence or absence of supercritical conditions appear to be somewhat unrealistic. © 1969 Society of Economic Geologists, Inc.

Economic Geology↗

USGS1989

Retention and transport of nutrients in a third-order stream: Channel processes

Chloride was injected as a conservative tracer with nitrate to examine nitrate retention (storage plus biotic uptake) and transport in a 327—m reach of a third—order stream draining a forested basin in northwestern California. Prior to injections, diel patterns of nutrient concentrations were measured under background conditions. Nitrate concentration of stream water increased downstream, indicating that the reach was a source of dissolved inorganic nitrogen to downstream communities under background, low—flow conditions, despite uptake by photoautotrophs. At the onset of continuous solute injection over a 10—d period, timing the passage of the solute front indicated that storage dominated nitrate retention. Instantaneous concentration differences at the base of the reach at hour 24 indicated that biotic uptake accounted for 13% of the nitrate amendment while hydrologic storage constituted 29%. Corrected for groundwater dilution (11.7%), saturation of the stream's channel and hyporheic zones was not complete until 6.8 d of continuous injection. By day 3 nitrate retention was dominated by biotic processes. Biotic uptake was greatest during daylight hours indicating retention by photoautotrophs, but also occurred during darkness. After 10 d of continuous injection, mass balance calculations indicated that 29% of N (339 g) was retained from the total injected (1155 g), while the balance of injected nitrate was transported downstream. Storage of NO 3 — N was 117 g or 10% while biotic uptake was 222 g or 19%. Periphyton biomass on slides, chlorophyll a both on slides and on natural cobbles, and net community primary production all indicated a lag in periphyton response to nitrate amendment. Earliest indicators of a biotic response to nutrient amendment were decreases in both tissue C/N and epilithic respiration.

Ecology↗

USGS2011

Sperm quality assessments for endangered razorback suckers Xyrauchen texanus

Flow cytometry (FCM) and computer-assisted sperm motion analysis (CASA) methods were developed and validated for use with endangered razorback suckers Xyrauchen texanus collected ( n =64) during the 2006 spawning season. Sperm motility could be activated within osmolality ranges noted during milt collections (here 167–343 mOsm/kg). We hypothesized that sperm quality of milt collected into isoosmotic (302 mOsm/kg) or hyperosmotic (500 mOsm/kg) Hanks' balanced salt solution would not differ. Pre-freeze viabilities were similar between osmolalities (79%±6 (S.E.M.) and 76%±7); however, post-thaw values were greater in hyperosmotic buffer (27%±3 and 12%±2; P =0.0065), as was mitochondrial membrane potential (33%±4 and 13%±2; P =0.0048). Visual estimates of pre-freeze motility correlated with total ( r =0.7589; range 23–82%) and progressive motility ( r =0.7449) by CASA and were associated with greater viability ( r =0.5985; P <0.0001). Count (FCM) was negatively correlated with post-thaw viability ( r =-0.83; P =0.0116) and mitochondrial function ( r =-0.91; P =0.0016). By FCM-based assessments of DNA integrity, whereby increased fluorochrome binding indicated more fragmentation, higher levels were negatively correlated with count ( r =-0.77; P <0.0001) and pre-freeze viabilities ( r =-0.66; P =0.0004). Fragmentation was higher in isotonic buffer ( P =0.0234). To increase reproductive capacity of natural populations, the strategy and protocols developed can serve as a template for use with other imperiled fish species, biomonitoring, and genome banking.

Reproduction↗

USGS2017

Pneumonia in bighorn sheep: Risk and resilience

Infectious disease was an important driver of historic declines and extirpations of bighorn sheep (Ovis canadensis) in North America and continues to impede population restoration and management. Domestic sheep have long been linked to pneumonia outbreaks in bighorn sheep and this association has now been confirmed in 13 captive commingling experiments. However, ecological and etiological complexities still hinder our understanding and control of the disease. We provide an overview of the current state of knowledge about the biology and management of respiratory disease in bighorn sheep and propose strategies for moving forward. Epizootic pneumonia in bighorn sheep is polymicrobial. Mycoplasma ovipneumoniae, a bacterium host-specific to Caprinae and commonly carried by healthy domestic sheep and goats appears to be a necessary primary agent. All-age epizootics following introduction of M. ovipneumoniae along with other pathogens into bighorn sheep populations are usually severe (median mortality 47%) but fatality rates vary widely, from 15 – 100%. Disease severity may be influenced by the strain of M. ovipneumoniae, by secondary bacterial and viral pathogens, and by factors affecting transmission and host immunity. Once introduced, M. ovipneumoniae can persist in bighorn sheep populations for decades. Carrier dams transmit the pathogen to their susceptible lambs, triggering fatal pneumonia outbreaks in nursery groups, which limits recruitment and slows or prevents population recovery. The result is that demographic costs of pathogen persistence often outweigh the impacts of the initial invasion and die-off. There is currently no effective vaccine or antibiotic for domestic or wild sheep and to date, no management actions have been successful in reducing morbidity, mortality, or disease spread once pathogen invasion has occurred. Molecular-based strain typing suggests that spillover of M. ovipneumoniae into bighorn sheep populations from domestic small ruminants is ongoing, and that consequences of pathogen invasion are amplified by movements of infected bighorn sheep. Therefore, current disease management strategies focus on reducing risk of spillover from reservoir populations of domestic small ruminants and on limiting transmission among bighorn sheep. A broad array of approaches has been tried and more are needed to prevent pathogen introduction, induce disease fadeout in persistently infected populations, and promote population resilience across the diverse landscapes bighorn sheep inhabit. A comprehensive examination of disease dynamics across populations could help elucidate how disease fades out naturally and if population resilience can be increased in the face of infection. Cross-jurisdictional adaptive management experiments and transdisciplinary collaboration, including partnerships with members of the domestic sheep and goat community, are needed to facilitate innovation and speed progress towards sustainable solutions for managing pneumonia to protect and restore bighorn sheep populations.

California, Idaho, Nevada, Oregon, Utah, Washingto↗

USGS2007

Observations of magnetite dissolution in poorly drained soils

Dissolution of strongly magnetic minerals is a common and relatively rapid phenomenon in poorly drained soils of the central United States, resulting in low magnetic susceptibility (MS). Low Eh reducing conditions are primarily responsible for magnetic mineral dissolution; a process likely mediated by iron-reducing bacteria in the presence of soil organic matter. Based on transects across drainage sequences from nine sites, natural magnetic minerals (>5 ??m) extracted from surface soil consist of 54% ?? 18% magnetite, 21% ?? 11% titanomagnetite, and 17% ?? 14% ilmenite. Magnetite and titanomagnetite dissolution, assessed by scanning electron microscopy on a 0-to-3 scale, inversely correlates with surface soil MS (r = 0.53), a proxy for soil drainage at studied transects. Altered magnetite typically displays etch pits <1-??m diameter, whereas titanomagnetite exhibits a latticework pattern of alteration along planes of crystallographic weakness (<1-??m spacing). Ilmenite, containing solely ferrous iron, is unaffected by reducing conditions, portraying mainly smooth-textured grains. Magnetic fractions (>5 ??m) include 26% ?? 18% anthropogenic fly ash that also exhibits greater dissolution in low MS soils (r = 0.38), indicating detectable alteration can occur within 150 years in low Eh soils. Laboratory induced reduction of magnetite, titanomagnetite, and magnetic fly ash, with a citrate-bicarbonate- dithionite solution, resulted in dissolution textures similar to those of in situ soil particles. Although experiments indicate that reductive dissolution of magnetite can occur abiotically under extreme conditions, bacteria likely play an important role in the natural environment. ?? 2007 Lippincott Williams & Wilkins, Inc.

Soil Science↗

USGS1985

Hydrogeology, digital solute-transport simulation, and geochemistry of the Lower Cretaceous aquifer system near Baltimore, Maryland

This study was made to develop information on the hydrogeology and ground-water geochemistry of the Patuxent and Patapsco aquifers (Lower Cretaceous) near Baltimore, Maryland. This information is needed to evaluate the availability and chemical quality of water from these aquifers. The Patuxent aquifer unconformably overlies Lower Paleozoic and Precambrian basement rocks and consists primarily of medium- to coarse-grained quartz sand. Discontinuous lenses of gravel and silty clay are commonly interbedded with the sand-sized material. The Patuxent aquifer in this area attains a thickness of 250 feet and transmissivities range from 2,000 to 8,000 feet squared per day. The Patuxent is the most productive source of ground water in the Baltimore area. In 1982, approximately 11 million gallons of water per day was produced from this unit. Several cones of depression, ranging from 30 to 50 feet below sea level, have developed in response to this pumping stress. The Arundel Formation conformably overlies the Patuxent aquifer. The Arundel is composed predominantly of clay and ranges from 0 to 150 feet thick. The Arundel exhibits very low vertical hydraulic conductivities that are on the order of 10 -9 to 10 -11 feet per second. This unit acts as the upper confining bed of the Patuxent aquifer in much of the project area. The Patapsco aquifer unconformably overlies the Arundel Formation and is a medium- to fine-grained quartz sand. The Patapsco functions as a water-table aquifer in much of the project area. Although the Patapsco has been heavily pumped in the past, pumpage from that aquifer in Baltimore was negligible in 1982. Brackish-water contamination of the Patuxent and Patapsco aquifers has been a major water-quality problem since the early 1900's. The Patuxent aquifer presently (1982) contains a circular plume of brackish-water contamination about 5 miles in diameter. This plume is centered on the Harbor district and has enlarged measurably since 1945. The Patapsco aquifer has a smaller zone of brackish-water contamination that has decreased in size since 1945. Borehole data demonstrate that the Arundel Formation has been breached by Pleistocene river channels near the Harbor district. These erosional channels provide a conduit for brackish water to intrude into the Patuxent aquifer. A two-dimensional areal solute-transport model of the Patuxent aquifer was constructed. This model was designed to estimate the future movement of the brackish-water plume based on alternative scenarios of aquifer use. Model simulations suggest that the plume will remain relatively immobile if 1982 pumping patterns continue into the foreseeable future. However, increased pumpage in the Marley Neck peninsula could draw the plume to the southeast and increase contamination of the Fairfield area. The water quality of the Patuxent aquifer is extremely variable. Because of this variability, it is useful to divide the aquifer into three water-quality zones: Zone 1 -- This zone corresponds to the plume of brackish-water contamination. Zone 2 -- This zone exhibits evidence of urbanization-related contamination such as measurable concentrations of organic chemicals and elevated concentrations of trace elements and total organic carbon. Zone 3 -- Water composition in this zone is controlled exclusively by naturally occurring chemical processes. These processes are dominated by reactions involving dissolved iron. Near the outcrop area, oxidation of pyrite and lignite consumes dissolved oxygen and produces ledges of iron hydroxide-cemented sandstones and conglomerates. The predominant dissolved iron species in oxic water is Fe(OH) 2 + . Downgradient, the water becomes anoxic and sulfate reduction becomes an important process. The predominant dissolved iron species in anoxic water is Fe 2+ .

Maryland↗

USGS1998

DNA-labeled clay: A sensitive new method for tracing particle transport

The behavior of mobile colloids and sediment in most natural environments remains poorly understood, in part because characteristics of existing sediment tracers limit their widespread use. Here we describe the development of a new approach that uses a DNA-labeled montmorillonite clay as a highly sensitive and selective sediment tracer that can potentially characterize sediment and colloid transport in a wide variety of environments, including marine, wetland, ground-water, and atmospheric systems. Characteristics of DNA in natural systems render it unsuitable as an aqueous tracer but admirably suited as a label for tracing particulates. The DNA-labeled-clay approach, using techniques developed from molecular biology, has extremely low detection limits, very specific detection, and a virtually infinite number of tracer signatures. Furthermore, DNA-labeled clay has the same physical characteristics as the particles it is designed to trace, it is environmentally benign, and it can be relatively inexpensively produced and detected. Our initial results show that short (500 base pair) strands of synthetically produced DNA reversibly adsorb to both Na-montmorillonite and powdered silica surfaces via a magnesium bridge. The DNA-montmorillonite surface complexes are stable in calcium-bicarbonate spring waters for periods of up to 18 days and only slowly desorb to the aqueous phase, whereas the silica surface complex is stable only in distilled water. Both materials readily release the adsorbed DNA in dilute EDTA solutions for amplification by the polymerase chain reaction (PCR) and quantification. The stability of the DNA-labeled clay complex suggests that this material would be appropriate for use as an extremely sensitive sediment tracer for flow periods of as long as 2 weeks, and possibly longer.

Geology↗

USGS1971

An evaluation of procedures used in computing chemical denudation rates

Computations of chemical denudation rates (that is, the average rate of lowering of the earth's crust by chemical processes) should be based only upon those components of dissolved loads of streams that are derived from chemical weathering of rocks and soils, even though identification of those components is difficult and imprecise. Past computations of chemical denudation rates exaggerated by 1.4 to 2.4 times the significance of this process because they were calculated from total dissolved loads. Identification of separate denudation and nondenudation components in a water analysis can be done most readily for streams in crystalline silicate rock terrane where commonly 25 to 55 percent of the dissolved solids are HCO 3 −1 , SO 4 −2 , Cl −1 , and NO 3 −1 that cannot be derived from the underlying rock; instead these ions are derived either directly from the atmosphere or from atmosphere-biosphere interactions. Most of the remaining solutes are derived from chemical weathering or rainfall, or both. Existing data are often insufficient to separate these two components, but atmospheric contributions to dissolved loads of dilute natural waters are substantial. The commonly observed increased concentration of dissolved solids in chemically polluted rivers is produced by concentration of natural dissolved loads by evaporation, and by addition of solutes not present in natural waters. Concentration of natural solutes represents a modification of natural denudation processes that does not change the rate of denudation. Addition of new solutes represents man-induced, accelerated chemical denudation. Extrapolation of modern chemical denudation rates to geologic situations is extremely imprecise because of uncertainties in assessing man's influence on present dissolved loads, in reconstructing the number and magnitude of past climatic changes, and in evaluating the effects of evolving flora and fauna.

Bulletin of the Geological Society of America↗

USGS2012

Water quality and landscape processes of four watersheds in eastern Puerto Rico

Humid tropical regions occupy about a quarter of Earth's land surface, yet they contribute a substantially higher fraction of the water, solutes, and sediment discharged to the world's oceans. Nearly half of Earth's population lives in the tropics, and development stresses can potentially harm soil resources, water quality, and water supply and in addition increase landslide and flood hazards. Owing to Puerto Rico's steep topography, low water storage capacity, and dependence on trade-wind precipitation, the island's people, ecosystems, and water supply are vulnerable to extreme weather such as hurricanes, floods, and droughts. Eastern Puerto Rico offers a natural laboratory for separating geologic and land-cover influences from regional- and global-scale influences because of its various bedrock types and the changing land cover surrounding intact, mature forest of the Luquillo Experimental Forest. Accordingly, a multiyear assessment of hydrological and biogeochemical processes was designed to develop an understanding of the effects of these differences on local climate, streamflow, water quality, and ecosystems, and to form the basis for a long-term and event-based program of climate and hydrologic monitoring. Because infrequent, large storms play a major role in this landscape, we focused on high-runoff events, sampling 263 storms, including all major hurricanes from 1991 through 2005. The largest storms have profound geomorphic consequences, such as landslides, debris flows, deep gullying on deforested lands, excavation and suspension of sediment in stream channels, and delivery of a substantial fraction of annual stream sediment load. Large storms sometimes entrain ocean foam and spray causing high concentrations of seasalt-derived constituents in stream waters during the storm. Past deforestation and agricultural activities in the Cayaguás and Canóvanas watersheds accelerated erosion and soil loss, and this material continues to be remobilized during large storms. Nearly 5,000 routine and event samples were analyzed for parameters that allow determination of denudation rates based on suspended and dissolved loads; 860 of these samples were analyzed for a comprehensive suite of chemical constituents. The rivers studied are generally similar in water-quality characteristics, and windward or leeward aspect appears to exert a stronger influence on water quality than geology or land cover. Of samples analyzed for comprehensive chemistry and for sediment, 543 were collected at runoff rates greater than 1 millimeter per hour, 256 at rates exceeding 10 millimeters per hour, and 3 at rates exceeding 90 millimeters per hour. Streams have rarely been sampled during events with such high runoff rates. Rates of physical and chemical weathering are especially high, and physical denudation rates, forested watersheds included, are considerably greater than is expected for a steady-state system. The elevated physical erosion drives an increased particulate organic carbon flux, one that is large, important to the carbon cycle, and sustainable, because soil-carbon regeneration is rapid. The 15-year Water, Energy, and Biogeochemical Budget dataset, which includes discharge, field parameters, suspended sediment, major cations and anions, and nutrients, is available from the U.S. Geological Survey's National Water Information System (http://waterdata.usgs.gov/nwis). The dataset provides a baseline for characterizing future environmental change and will improve our understanding of the interdependencies of land, water, and biological resources and their responses to changes in climate and land use. Because eastern Puerto Rico resembles many tropical regions in terms of geology and patterns of development, implications from this study are transferable to other tropical regions facing deforestation, rapid land-use change, and climate change.

Professional Paper↗