USGS ScienceSearch

SEARCH · USGS Science

Results for “Freshwater Ecology”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 163 records · Page 9Linked to original sources

Disturbance is the primary determinant of food chain length when the top predator is constant

Food chain length (FCL) is a primary determinant of food web structure and is hypothesized to be influenced by habitat size, productivity, and disturbance. Understanding the environmental characteristics that determine food chain length can assist in understanding how food webs may be impacted due to changes in habitats and environmental characteristics. This study examines the impact of hydrologic disturbance on stream food webs when the top predator is constant. We analyzed FCL in less disturbed groundwater flashy streams and more disturbed runoff flashy streams using stable isotopes. Despite no difference in species richness or fish density, food chains in more disturbed streams had a lower FCL compared to food chains in more stable streams. Assemblage analysis showed that flow regime and drainage area significantly impacted individual species abundances. The more disturbed runoff flashy streams had higher proportions of primary consumer fish, such as the algivorous Campostoma sp. (Stonerollers), which likely drives the reduced FCL. Drainage area and land cover had non-significant relationships with FCL. Shifting community structure due to hydrologic variability likely leads to differences in diet of Micropterus dolomieu (Smallmouth Bass), and thus a difference in FCL.

Arkansas, Missouri, Oklahoma

Variation in diet and lipid content of age-0 sturgeon (Scaphirhynchus sp.) in the lower Missouri River basin

Shovelnose sturgeon ( Scaphirhynchus platorynchus ) and related endangered pallid sturgeon ( S. albus ) are species of interest in the highly modified Missouri River. Scaphirhynchus sturgeon require long distances of riverine habitat for the development of drifting free embryos along with suitable foraging habitat during the subsequent transition to exogenous feeding. Working with specimens collected by the US Army Corps of Engineers and Nebraska Game and Parks Commission, we examined diet composition of age-0 (<12 cm) sturgeon at four reaches in the lower Missouri River to examine the potential role of prey acquisition at this vulnerable life stage. In general, Ephemeroptera were more represented at reaches further upstream in the lower Missouri River, whereas Diptera larvae were the dominant prey item in reaches downstream. Body condition, as measured by total lipid content and length‒weight regressions, exhibited spatial differences in 2016 but not in 2017. Even with differences in prey frequencies and numbers consumed, percent consumption regardless of prey type remained consistent among reaches within years, but was overall higher in 2016 when river discharge was greater. Although temporal and spatial differences were observed in condition, comparisons using previous data from 2014 and 2015 suggest that these condition results were not driven by the longitudinal variability in prey composition as the reaches below Kansas city yielded relatively high and low lipid values despite the limited consumption of ephemeropteran prey relative to upstream reaches. Although it is unknown if any of the observed differences affected survival, our results, coupled with previous work, suggest that age-0 sturgeon can opportunistically forage in the lower Missouri River.

Missouri River

Rain interacts with directional wind to cause nest failures within breeding colonies of Western and Clark's Grebes

Western Grebe ( Aechmophorus occidentalis ) and Clark's Grebe ( Aechmophorus clarkii ) populations have declined across their range, and they are species of high conservation concern. Cascade Reservoir in central Idaho supports one of the largest breeding colonies of Aechmophorus grebes in North America (and the largest in Idaho), but few offspring are produced from the colony in most years. Low fecundity and little natal recruitment may be the proximate cause of Aechmophorus grebe population declines, but the ultimate cause of low recruitment is not known. One hypothesis for the low fecundity at Cascade Reservoir (and at other grebe colonies in the region) is that waves on freshwater breeding lakes inundate nests and cause pairs to abandon their nests. We tested that hypothesis by examining whether nest survival was negatively associated with changes in daily water level, daily peak wind speed and daily peak wind direction (i.e. winds that push water into the breeding colony). We also included daily mean temperature and daily total precipitation to evaluate a more general hypothesis that weather events caused nest failures. We used aerial imagery obtained from repeated drone flights to create encounter histories for 3888 Aechmophorus grebe nests to then estimate daily nest survival and evaluate whether daily water level, daily peak wind speed and daily peak wind direction (as predicted by the wind-driven wave hypothesis) were important causes of nest failure relative to other factors that commonly affect daily nest survival in birds. Nesting success was alarmingly low and we found some support for the wave inundation hypothesis; the results suggest that nesting attempts are more likely to fail on days with precipitation combined with winds blowing into the colony. Our results are the first to show that wind and precipitation affect the nest fate of Aechmophorus grebes.

Idaho

Decision support system for optimally managing water resources to meet multiple objectives in the Savannah River Basin

Managers of large river basins face conflicting demands for water resources such as wildlife habitat, water supply, wastewater assimilative capacity, flood control, hydroelectricity, and recreation. The Savannah River Basin, for example, has experienced three major droughts since 2000 that resulted in record low water levels in its reservoirs, impacting dependent economies for years. The Savannah River estuary contains two municipal water intakes and the ecologically sensitive freshwater tidal marshes of the Savannah National Wildlife Refuge. The Port of Savannah is the fourth busiest in the United States, and modifications to the harbor to expand ship traffic since the 1970s have caused saltwater to migrate upstream, reducing the freshwater marsh’s acreage more than 50 percent. A planned deepening of the harbor includes flow-alteration features to minimize further migration of salinity, whose effectiveness will only be known after all construction is completed. One of the challenges of large basin management is the optimization of water use through ongoing regional economic development, droughts, and climate change. This paper describes a model of the Savannah River Basin designed to continuously optimize regulated flow to meet prioritized objectives set by resource managers and stakeholders. The model was developed from historical data using machine learning, making it more accurate and adaptable to changing conditions than traditional models. The model is coupled to an optimization routine that computes the daily flow needed to most efficiently meet the water-resource management objectives. The model and optimization routine are packaged in a decision support system that makes it easy for managers and stakeholders to use. Simulation results show that flow can be regulated to substantially reduce salinity intrusions in the Savannah National Wildlife Refuge, while conserving more water in the reservoirs. A method for using the model to assess the effectiveness of the flow-alteration features after the deepening also is demonstrated.

Georgia, North Carolina, South Carolina

Newly documented host fishes for the eastern elliptio mussel (Elliptio complanata)

The eastern elliptio Elliptio complanata is a common, abundant, and ecologically important freshwater mussel that occurs throughout the Atlantic Slope drainage in the United States and Canada. Previous research has shown E. complanata glochidia to be host fish generalists, parasitizing yellow perch Perca flavescens , banded killifish Fundulus diaphanus , banded sculpin Cottus carolinae , and seven centrarchid species. Past laboratory studies have been conducted in the Midwest; however, glochidia used in these studies were obtained from adult mussels in the Great Lakes or St. Lawrence River basins, or glochidia sources were not reported. The objective of this study was to identify host fishes for E. complanata from streams in the Mid-Atlantic region. We used artificial laboratory infections to test host suitability of 38 fish and 2 amphibian species with E. complanata glochidia from the Chesapeake Bay drainage. Glochidia successfully metamorphosed into juvenile mussels on five fish species: American eel Anguilla rostrata , brook trout Salvelinus fontinalis , lake trout Salvelinus namaycush , mottled sculpin Cottus bairdii , and slimy sculpin Cottus cognatus . American eel was the most effective host, yielding the highest overall metamorphosis success (percentage of attached glochidia that transformed into juvenile mussels; ≥0.90) and producing 13.2 juveniles per fish overall. No juvenile E. complanata metamorphosed on other fish or amphibian species tested, including many previously identified host fishes that appear in the literature. Reasons for discrepancies in published host fish could include geographic variation in host use across the species' range, differences in host use between lentic and lotic populations, or poorly resolved taxonomy within the genus Elliptio .

Journal of Fish and Wildlife Management

Morphology of ruffe (Gymnocephalus cernuus) protolarvae from the St. Louis River, Lake Superior

We describe hatching and the morphological and meristic characteristics of 2.5-5.6 mm long ruffe protolarvae (Gymnocephalus cernuus). Eggs and sperm from St. Louis River ruffe were mixed, producing fertilized eggs that were 0.9-1.2 mm in diameter. Newly hatched protolarvae were 2.5-3.2 mm long. They had 14-15 preanal and 23-24 postanal myomeres, a continuous finfold of even width, unpigmented eyes, and a large anterior oil globule in the yolk sac, and the head deflected over the yolk sac. Pectoral fin buds appeared on the dorsal side of the yolk sac 5 hours after hatching. Two-day-old protolarvae had fully pigmented eyes, and the head was free from the yolk sac. Three-day-old protolarvae were 3.9-4.3 mm long and possessed opercula, gills, pectoral fins, and a functional jaw. Feeding and swimming began about one week after hatching when the yolk sac was almost completely absorbed. Protolarvae grew rapidly at 20-22 degrees C and were 4.9-5.6 mm long after 13 days. Newly hatched ruffe protolarvae are distinguished from other Lake Superior percids by having the fewest preanal myomeres (14-15), the head deflected over the yolk sac, continuous finfold of even width, and a total length of less than 4.0 mm.

Journal of Freshwater Ecology

Distribution and food habits of young-of-the-year fishes in a backwater lake of the upper Mississippi River

The distribution patterns and food habits of young-of-the-year (YOY) fishes in a lentic area adjacent to the main channel of Pool 7 of the upper Mississippi River were studied. Habitats sampled grouped distinctly based on percent composition and abundance of YOY fishes with those having submergent vegetation dominated by a number of important sport species. In late spring, the grouping of stations depended on the presence or absence of newly transformed northern pike (Esox lucius). In early summer, stations did not differ as distinctly in composition, but in total abundance of young. Those stations with submergent vegetation had total catches which were more than double those elsewhere. By late summer, submergent and mixed vegetation stations formed a distinct assemblage influenced by the preponderance of three species of sunfishes. (DBO).

Journal of Freshwater Ecology

The effect of fixative on total length of small-bodied stream fishes

Longnose dace (Rhinichthys cataractae), red shiner (Cyprinella lutrensis), and green sunfish (Lepomis cyanellus) were fixed in 5% and 10% formalin and 70% and 95% ethyl alcohol to determine fixative effects on total length (TL). Total length reduced over the first 24h for all species (P<0.0001) but then stabilized. Longnose dace and green sunfish TL reduction was less for 5% formalin than for either 70% or 95% ethanol (both P<0.0001), whereas the fixative solution had no effect on red shiner TL (P=0.347). A greater percentage of change in TL was observed in green sunfish and red shiner than in longnose dace, suggesting that body form (compressiform vs. fusiform) may affect shrinkage rate among adult stream fishes.

Journal of Freshwater Ecology

Habitat features affect bluehead sucker, flannelmouth sucker, and roundtail chub across a headwater tributary system in the Colorado River Basin

We assessed the distributions of three species of conservation concern, bluehead sucker (Catostomus discobolus), flannelmouth sucker (Catostomus latipinnis), and roundtail chub (Gila robusta), relative to habitat features across a headwater tributary system of the Colorado River basin in Wyoming. We studied the upper Muddy Creek watershed, Carbon County, portions of which experience intermittent flows during late summer and early fall. Fish and habitat were sampled from 57 randomly-selected, 200-m reaches and 416 habitat units (i.e., pools, glides, or runs) during the summer and fall of 2003 and 2004. Among reaches, the occurrences of adults and juveniles of all three species were positively related to mean wetted width and the surface area of pool habitat, and the occurrences of adult bluehead sucker and roundtail chub were also positively related to the abundance of rock substrate. Only juvenile bluehead sucker appeared to be negatively influenced by the proportion of a reach that was dry at the time of sampling. Within individual pools, glides, and runs, the occurrences of adults and juveniles of all three species were positively related to surface area and maximum depth, and occurrences of bluehead sucker and flannelmouth sucker juveniles were more probable in pools than in glides or runs.

Journal of Freshwater Ecology

Foraging characteristics of larval bluegill sunfish and larval longear sunfish in the Kanawha River, West Virginia

We determined spatial and temporal foraging characteristics of larval bluegill sunfish (Lepomis macrochirus) and longear sunfish (Lepomis megalotis) in the upper Kanawha River, West Virginia during the summer of 1989. Stomach contents were examined among habitat types (i.e., main channel, main-channel border, and shoreline habitats) and depth (surface, middle, and bottom). Diet of larval bluegill sunfish was dominated by Chironomidae, temporally and spatially. Chironomidae dominated larval longear sunfish diet in main channel and main-channel border collections from all three depths. However, along the shoreline, larval longear sunfish diet was dominated by Cladocera.

Journal of Freshwater Ecology

Use of an annular chamber for testing thermal preference of westslope cutthroat trout and rainbow trout

Remaining populations of westslope cutthroat trout (Oncorhynchus clarkii lewisi) in western North America are primarily confined to cold headwaters whereas nonnative rainbow trout (Oncorhynchus mykiss) predominate in warmer, lower elevation stream sections historically occupied by westslope cutthroat trout. We tested whether differing thermal preferences could account for the spatial segregation observed in the field. Thermal preferences of age-1 westslope cutthroat trout and rainbow trout (125 to 150 mm total length) were assessed in the laboratory using a modified annular preference chamber at acclimation temperatures of 10, 12, 14, and 16??C Final preferred temperature of westslope cutthroat trout (14.9??C) was similar to that of rainbow trout (14.8??C) when tested in a thermal gradient of 11-17??C The high degree of overlap in thermal preference indicates the two species have similar thermal niches and a high potential for competition. We suggest several modifications to the annular preference chamber to improve performance in future studies.

Journal of Freshwater Ecology

Diel diet composition and feeding activity of round goby in the nearshore region of Lake Ontario

Expansion of the invasive round goby Apollonia melanostoma (=Neogobius melanostomus) throughout the Great Lakes drainage has created considerable concern among fisheries management agencies. These concerns have led to several studies on the biology and impact of the goby in the basin. However, little information exists on diel patterns in food consumption of the round goby. We examined the diets of 300 round gobies collected during crepuscular, diurnal, and nocturnal periods in Lake Ontario. There was little variation in the diel diet composition of the goby, as chironomid larvae were the major prey consumed during each period. Feeding intensity of the round goby was significantly (P<0.05) greater at night than during crepuscular or diurnal periods.

Journal of Freshwater Ecology

Diel variation in near-shore great lakes fish assemblages and implications for assessment sampling and coastal management

I compared fish assemblages captured in three different microhabitats (shoreline, pelagic near-shore, and benthic near-shore) during day and night fishing in different protection (inside bay or tributary vs. outside in Lake Ontario proper) and turbidity regimes of four near-shore areas of Lake Ontario. The effects of diel movement and availability to gear were clearly evident. Fish assemblages were consistently and significantly more diverse at night than during the day, with nighttime assemblages often being supersets of daytime assemblages. Evidence for a turbidity effect was much weaker than the effects of nocturnal movements and changes in availability to the gear associated with darkness. Nighttime sampling is more likely to capture the full array of species in near-shore areas of the Great Lakes than daytime sampling.

Journal of Freshwater Ecology

Survival of foul-hooked largemouth bass (Micropterus salmoides)

We conducted a field experiment to determine the survival rate of foul-hooked (hooked external to the oral cavity) largemouth bass (Micropterus salmoides) caught and released by recreational anglers. Of 42 largemouth bass caught with hard-plastic baits containing three treble hooks, 15 were hooked only within the mouth and 27 had at least one hook penetrating the external surface of the fish (i.e., foul-hooked). There was no difference in survival of mouth-hooked (100%), foul-hooked (100%), or control (100%) largemouth bass.

Journal of Freshwater Ecology

Optimally managing water resources in large river basins for an uncertain future

Managers of large river basins face conflicting needs for water resources such as wildlife habitat, water supply, wastewater assimilative capacity, flood control, hydroelectricity, and recreation. The Savannah River Basin for example, has experienced three major droughts since 2000 that resulted in record low water levels in its reservoirs, impacting local economies for years. The Savannah River Basin’s coastal area contains municipal water intakes and the ecologically sensitive freshwater tidal marshes of the Savannah National Wildlife Refuge. The Port of Savannah is the fourth busiest in the United States, and modifications to the harbor have caused saltwater to migrate upstream, reducing the freshwater marsh’s acreage more than 50 percent since the 1970s. There is a planned deepening of the harbor that includes flow-alteration features to minimize further migration of salinity. The effectiveness of the flow-alteration features will only be known after they are constructed. One of the challenges of basin management is the optimization of water use through ongoing development, droughts, and climate change. This paper describes a model of the Savannah River Basin designed to continuously optimize regulated flow to meet prioritized objectives set by resource managers and stakeholders. The model was developed from historical data by using machine learning, making it more accurate and adaptable to changing conditions than traditional models. The model is coupled to an optimization routine that computes the daily flow needed to most efficiently meet the water-resource management objectives. The model and optimization routine are packaged in a decision support system that makes it easy for managers and stakeholders to use. Simulation results show that flow can be regulated to significantly reduce salinity intrusions in the Savannah National Wildlife Refuge while conserving more water in the reservoirs. A method for using the model to assess the effectiveness of the flow-alteration features after the deepening also is demonstrated

South Carolina

Optimally managing water resources in large river basins for an uncertain future

Managers of large river basins face conflicting needs for water resources such as wildlife habitat, water supply, wastewater assimilative capacity, flood control, hydroelectricity, and recreation. The Savannah River Basin for example, has experienced three major droughts since 2000 that resulted in record low water levels in its reservoirs, impacting local economies for years. The Savannah River Basin&rsquo;s coastal area contains municipal water intakes and the ecologically sensitive freshwater tidal marshes of the Savannah National Wildlife Refuge. The Port of Savannah is the fourth busiest in the United States, and modifications to the harbor have caused saltwater to migrate upstream, reducing the freshwater marsh&rsquo;s acreage more than 50 percent since the 1970s. There is a planned deepening of the harbor that includes flow-alteration features to minimize further migration of salinity. The effectiveness of the flow-alteration features will only be known after they are constructed. One of the challenges of basin management is the optimization of water use through ongoing regional economic development, droughts, and climate change. This paper describes a model of the Savannah River Basin designed to continuously optimize regulated flow to meet prioritized objectives set by resource managers and stakeholders. The model was developed from historical data by using machine learning, making it more accurate and adaptable to changing conditions than traditional models. The model is coupled to an optimization routine that computes the daily flow needed to most efficiently meet the water-resource management objectives. The model and optimization routine are packaged in a decision support system that makes it easy for managers and stakeholders to use. Simulation results show that flow can be regulated to substantially reduce salinity intrusions in the Savannah National Wildlife Refuge while conserving more water in the reservoirs. A method for using the model to assess the effectiveness of the flow-alteration features after the deepening also is demonstrated.

Georgia, South Carolina

FishTraits: a database of ecological and life-history traits of freshwater fishes of the United States

The need for integrated and widely accessible sources of species traits data to facilitate studies of ecology, conservation, and management has motivated development of traits databases for various taxa. In spite of the increasing number of traits-based analyses of freshwater fishes in the United States, no consolidated database of traits of this group exists publicly, and much useful information on these species is documented only in obscure sources. The largely inaccessible and unconsolidated traits information makes large-scale analysis involving many fishes and/or traits particularly challenging. We have compiled a database of > 100 traits for 809 (731 native and 78 nonnative) fish species found in freshwaters of the conterminous United States, including 37 native families and 145 native genera. The database, named Fish Traits, contains information on four major categories of traits: (1) trophic ecology; (2) body size, reproductive ecology, and life history; (3) habitat preferences; and (4) salinity and temperature tolerances. Information on geographic distribution and conservation status was also compiled. The database enhances many opportunities for conducting research on fish species traits and constitutes the first step toward establishing a central repository for a continually expanding set of traits of North American fishes.

Fisheries