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At least 1,603 records · Page 89Linked to original sources
USGS1997

Power distribution in complex environmental negotiations: Does balance matter?

We studied six interagency negotiations covering Federal Energy Regulatory Commission (FERC) hydroelectric power licenses. Negotiations occurred between state and federal resource agencies and developers over project operations and natural resource mitigation. We postulated that a balance of power among parties was necessary for successful negotiations. We found a complex relationship between balanced power and success and conclude that a balance of power was associated with success in these negotiations. Power played a dynamic role in the bargaining and illuminates important considerations for regulatory design.

Journal of Public Administration Research and Theo↗
USGS2013

Transcriptome resources for the frogs Lithobates clamitans and Pseudacris regilla , emphasizing antimicrobial peptides and conserved loci for phylogenetics

We developed genetic resources for two North American frogs, Lithobates clamitans and Pseudacris regilla , widespread native amphibians that are potential indicator species of environmental health. For both species, mRNA from multiple tissues was sequenced using 454 technology. De novo assemblies with Mira3 resulted in 50 238 contigs (N50 = 687 bp) and 48 213 contigs (N50 = 686 bp) for L. clamitans and P. regilla , respectively, after clustering with CD-Hit-EST and purging contigs below 200 bp. We performed BLASTX similarity searches against the Xenopus tropicalis proteome and, for predicted ORFs, HMMER similarity searches against the Pfam-A database. Because there is broad interest in amphibian immune factors, we manually annotated putative antimicrobial peptides. To identify conserved regions suitable for amplicon resequencing across a broad taxonomic range, we performed an additional assembly of public short-read transcriptome data derived from two species of the genus Rana and identified reciprocal best TBLASTX matches among all assemblies. Although P. regilla , a hylid frog, is substantially more diverged from the ranid species, we identified 56 genes that were sufficiently conserved to allow nondegenerate primer design with Primer3. In addition to providing a foundation for comparative genomics and quantitative gene expression analysis, our results enable quick development of nuclear sequence-based markers for phylogenetics or population genetics.

Molecular Ecology Resources↗
USGS2001

Coastal ground water at risk — Saltwater contamination at Brunswick, Georgia and Hilton Head Island, South Carolina

Introduction Saltwater contamination is restricting the development of ground-water supply in coastal Georgia and adjacent parts of South Carolina and Florida. The principal source of water in the coastal area is the Upper Floridan aquifer—an extremely permeable and high-yielding aquifer—which was first developed in the late 1800s. Pumping from the aquifer has resulted in substantial ground-water-level decline and subsequent saltwater intrusion of the aquifer from underlying strata containing highly saline water at Brunswick, Georgia, and with encroachment of sea-water into the aquifer at the northern end of Hilton Head Island, South Carolina. The saltwater contamination at these locations has constrained further development of the Upper Floridan aquifer in the coastal area and has created competing demands for the limited supply of freshwater. The Georgia Department of Natural Resources, Georgia Environmental Protection Division (GaEPD) has restricted permitted withdrawal of water from the Upper Floridan aquifer in parts of the coastal area (including the Savannah and Brunswick areas) to 1997 rates, and also has restricted additional permitted pumpage in all 24 coastal area counties to 36 million gallons per day above 1997 rates. These actions have prompted interest in alternative management of the aquifer and in the development of supplemental sources of water supply including those from the shallower surficial and upper and lower Brunswick aquifers and from the deeper Lower Floridan aquifer.

Georgia, South Carolina↗
USGS2001

Socioeconomic and environmental impacts of landslides in the Western Hemisphere

In spite of improvements in recognition, prediction, mitigative measures, and warning systems, economic losses and casualties due to landslides in the Western Hemisphere appear to be growing as a result of increasing development of landslide-prone areas due to population pressures. This paper notes outstanding examples of socioeconomic losses in the Americas. Landslides impact the following elements of the natural environment: (1) the topography/morphology of both the subaerial and submarine surfaces of the Earth, (2) rivers, streams, forests, and grasslands, and (3) habitats of native fauna, both on the Earth?s surface and in its streams and oceans. Environmental disturbances are results of general tendency toward degradation of the Earth?s surface by gravitational mass wasting and erosion.

Open-File Report↗
USGS1990

Sago pondweed (Potamogeton pectinatus L.): A literature review

Sago pondweed ( Potamogeton pectinatus L.) is a submersed macrophyte of nearly cosmopolitan distribution. The plant is of worldwide importance as a waterfowl food but also can be a nuisance in irrigation canals and recreational areas. The plant reproduces by many different means, depending on habitat and environmental stress. Several genetic ecotypes have evolved. Most important as waterfowl food are the turions (tubers), vegetative propagules rich in carbohydrates that are mostly buried in bottom sediments. In temperate wetlands, most turions sprout in spring, making sago behave as an annual. Drupelets (seeds) are the sexual propagules of sago and provide a mechanism for sago to survive periods of drought and excessive water salinity. Drupelets can be washed ashore or carried by birds for long distances. Sago decomposes rapidly at senescence, annually in temperate wetlands. Sago is mostly found in semipermanently or permanently flooded mixosaline lacustrine, palustrine, and riverine wetlands < 2.5 m deep, where fetches are not large or currents are < 1 m/s. Sago seems to prefer stable water levels but can tolerate significant water level fluctuations. Among the Potamogetons, only sago tolerates high salinity, pH, and alkalinity, but it fares poorly among specialist taxa in acidic or nutrient-poor waters. Sago is highly tolerant of eutrophic waters, and it can be the only species of submersed macrophyte present in heavily polluted sites. Sago grows in nearly all bottom substrates. Turbidity is the factor that most frequently limits sago growth. Sago often occurs in monotypic stands but can grow with many other submersed and emergent macrophytes. Dominance by sago in certain wetlands sometimes alternates with dominance by other submersed macrophytes when salinities or other environmental factors change. Sago also can be associated with a large variety of unattached filamentous, planktonic, or epiphytic algae. Increased turbidity caused by planktonic algae often is responsible for lowered sago production. Less common biotic limiting factors are organic pollutants and consumption and uprooting by waterfowl and fish. Sago provides food or shelter for amphibians, reptiles, fish, and mammals. The greatest value of sago in North America is as food for migrant and staging waterfowl, primarily diving ducks and swans. Sago beds also provide habitat for a large complex of invertebrates (an important food source for young waterfowl), but direct consumption of living sago by invertebrates is negligible. Sago has been propagated for many years-indoors, as an experimental organism for work in plant physiology or herbicide testing, and outdoors, for purposes of attracting waterfowl. Much work has also been done developing methods to control excessive sago growth in fishponds and irrigation canals. Future research should concentrate on (1) determining, in a variety of wetland types, the causes of light-limiting turbidity that often suppresses sago growth, (2) understanding the ways in which human activities on and near wetlands affect sago production, and (3) developing reliable and predictable techniques to stimulate sago production for waterfowl by using water level manipulations and other means, in a variety of environmental settings.

Resource Publication↗
USGS2013

Monitoring of green infrastructure at The Grove in Bloomington, Illinois

The City of Bloomington, Illinois, restored Kickapoo Creek to a more natural state by incorporating green infrastructure—specifically flood-plain reconnection, riparian wetlands, meanders, and rock riffles—at a 90-acre park within The Grove residential development. A team of State and Federal agencies and contractors are collecting data to monitor the effectiveness of this stream restoration in improving water quality and stream habitat. The U.S. Geological Survey (USGS) is collecting and analyzing water resources data; Illinois Department of Natural Resources (IDNR) is collecting fish population data; Illinois Environmental Protection Agency (IEPA) is collecting macroinvertebrates and riparian habitat data; and Prairie Engineers of Illinois, P.C., is collecting vegetation data. The data collection includes conditions upstream, within, and downstream of the development and restoration. The 480-acre development was designed by the Farnsworth Group to reduce peak stormwater flows by capturing runoff in the reconnected flood plains with shallow wetland basins. Also, an undersized park bridge was built at the downstream end of the park to pass the 20-percent annual exceedance probability flows (historically referred to as the 5-year flood), but detain larger floods. This design also helps limit sediment deposition from sediments transported in the drainage ditches in the upper 9,000 acres of agricultural row crops. Maintaining sediment-transport capacity minimizes sediment deposition in the restored stream segments, which reduces the loss of riparian and wetland-plant communities and instream habitat. Two additional goals of the restoration were to reduce nutrient loads and maintain water quality to support a diverse community of biotic species. Overall, 2 miles of previously managed agricultural-drainage ditches of Kickapoo Creek were restored, and the park landscape maximizes the enhancement of native riparian, wetland, and aquatic species for the park’s trail system. The purpose of this fact sheet is to give an overview and examples of the data being collected.

Illinois↗
USGS2011

Groundwater conditions in Utah, spring of 2011

This is the forty-eighth in a series of annual reports that describe groundwater conditions in Utah. Reports in this series, published cooperatively by the U.S. Geological Survey and the Utah Department of Natural Resources, Division of Water Rights, and the Utah Department of Environmental Quality, Division of Water Quality, provide data to enable interested parties to maintain awareness of changing groundwater conditions. This report, like the others in the series, contains information on well construction, groundwater withdrawal from wells, water-level changes, precipitation, streamflow, and chemical quality of water. Information on well construction included in this report refers only to wells constructed for new appropriations of groundwater. Supplementary data are included in reports of this series only for those years or areas that are important to a discussion of changing groundwater conditions and for which applicable data are available. This report includes individual discussions of selected significant areas of groundwater development in the State for calendar year 2010. Most of the reported data were collected by the U.S. Geological Survey in cooperation with the Utah Department of Natural Resources, Division of Water Rights, and the Utah Department of Environmental Quality, Division of Water Quality. This report is also available online at http:// www.waterrights.utah.gov/techinfo/ and http://ut.water.usgs. gov/publications/GW2011.pdf. Groundwater conditions in Utah for calendar year 2009 are reported in Burden and others (2010) and available online at http://ut.water.usgs.gov/ publications/GW2010.pdf. Analytical results associated with water samples collected from each area of groundwater development were compared to State of Utah Maximum Contaminant Levels (MCLs) and secondary drinking-water standards of routinely measureable substances present in water supplies. The MCLs and secondary drinking-water standards can be accessed online at http://www.rules.utah.gov/publicat/code/r309/r309-200. htm#T5. The U.S. Environmental Protection Agency (EPA) drinking-water standards can be accessed at http://www.epa. gov/safewater/mcl.html#mcls. Maximum Contaminant Levels and secondary drinking-water standards were developed for public water systems and do not apply to the majority of wells sampled during this study.

Utah↗
USGS2017

Optimization of human, animal, and environmental health by using the One Health approach

Emerging diseases are increasing burdens on public health, negatively affecting the world economy, causing extinction of species, and disrupting ecological integrity. One Health recognizes that human, domestic animal, and wildlife health are interconnected within ecosystem health and provides a framework for the development of multidisciplinary solutions to global health challenges. To date, most health-promoting interventions have focused largely on single-sector outcomes. For example, risk for transmission of zoonotic pathogens from bush-meat hunting is primarily focused on human hygiene and personal protection. However, bush-meat hunting is a complex issue promoting the need for holistic strategies to reduce transmission of zoonotic disease while addressing food security and wildlife conservation issues. Temporal and spatial separation of humans and wildlife, risk communication, and other preventative strategies should allow wildlife and humans to co-exist. Upstream surveillance, vaccination, and other tools to prevent pathogen spillover are also needed. Clear multi-sector outcomes should be defined, and a systems-based approach is needed to develop interventions that reduce risks and balance the needs of humans, wildlife, and the environment. The ultimate goal is long-term action to reduce forces driving emerging diseases and provide interdisciplinary scientific approaches to management of risks, thereby achieving optimal outcomes for human, animal, and environmental health.

Journal of Veterinary Science↗
USGS1989

Applicability of ambient toxicity testing to national or regional water-quality assessment

Comprehensive assessment of the quality of natural waters requires a multifaceted approach. Based on experimentation designed to monitor responses of organisms to environmental stresses, toxicity testing may have diverse purposes in water quality assessments. These purposes may include identification that warrant further study because of poor water quality or unusual ecological features, verification of other types of monitoring, or assessment of contaminant effects on aquatic communities. A wide variety of toxicity test methods have been developed to fulfill the needs of diverse applications. The methods differ primarily in the full selections made relative to four characteristics: (1) test species, (2) endpoints (acute or chronic), (3) test enclosure type, and (4) test substance (toxicant) that functions as the environmental stress. Toxicity test approachs vary in their capacity to meet the needs of large-scale assessments of existing water quality. Ambient testing is more likely to meet these needs than are the procedures that call for exposure of the test organisms to known concentrations of a single toxicant. However, meaningful interpretation of ambient test results depend on the existence of accompanying chemical analysis of the ambient media. The ambient test substance may be water or sediments. Sediment tests have had limited application, but they are useful because of the fact that most toxicants tend to accumulate in sediments, and many test species either inhabit the sediments or are in frequent contact with them. Biochemical testing methods, which have been developing rapidly in recent years, are likely to be among the most useful procedures for large-scale water quality assessments. They are relatively rapid and simple, and more importantly, they focus on biochemical changes that are the initial responses of virtually all organisms to environmental stimuli. Most species are sensitive to relatively few toxicants and their sensitivities vary as conditions change. One of the most informative approaches for toxicity testing is to combine biochemical tests with other test methods in a ' battery or tests ' that is diversified enough to characterize different types of toxicants and different trophic levels. (Lantz-PTT)

Open-File Report↗
USGS1977

Tactical approach for determining impact of energy development on wildlife in Wyoming: special report number 1

The U.S. Fish and Wildlife Service, within the Department of Interior, is responsible for providing national leadership in the management and protection of the nation's fish and wildlife resources, their habitat, and environment. Specifically, the Office of Biological Services obtains and assimilates biological and environmental data and identifies additional informational needs and means necessary to provide biological input into major natural resource decisions. The Wyoming Coal Coordinator for the U.S Fish and Wildlife Service is assigned the duty of becoming attuned to the ramifications of energy development within the State and its potential impact upon wildlife. In order for the Coal Coordinator to fulfill his obligations in becoming an "energy expert" for the Fish and Wildlife Service in Wyoming, it will be necessary for him to develop a means of obtaining an overview of the energy development situation. Similarly, in order for him to identify those area of critical concern to wildlife resources, it will be necessary that he determine or predict where energy development will occur, the nature of this development, and the cumulative effects of energy development upon wildlife. Likewise, in order to identify where wildlife data gaps occur and to determine future wildlife information needs, it will be necessary for him to compile and synthesize relevant existing data resources. It therefore becomes apparent that a need exists for him to gather and interpret pertinent information in a systematic way to meet these ends. The following is an account of the tactical number in which the Wyoming Coal Coordinator intends to approach the duties outlined above the rationale to be followed in meeting these needs. First, a general discussion on assessing impacts on wildlife is provided to form a basis for obtaining an overview. Secondly, a series of reports which will be generated to summarize existing information and to help identify potential problem areas is outlined. These reports will be further utilized to determine wildlife data gaps and future information needs related to wildlife and future energy development.

Wyoming↗
USGS2022

Use case development for earth monitoring, analysis, and prediction (EarthMAP)—A road map for future integrated predictive science at the U.S. Geological Survey

Executive Summary The U.S. Geological Survey (USGS) 21st-century science strategy 2020–30 promotes a bureau-wide strategy to develop and deliver an integrated, predictive science capability that works at the scales and timelines needed to inform societally relevant resource management and protection and public safety and environmental health decisions (U.S. Geological Survey, 2021). This is the overarching goal of the USGS Earth Monitoring, Analysis, and Prediction (EarthMAP) vision, which consists of three components: (1) integrated data and information, (2) integrated predictive science, and (3) actionable information—all designed and delivered to respond to user needs. To launch this vision and help shape the design and implementation of integrated predictive science, the USGS Regional Offices each developed a set of use cases (hereafter Use Cases)—short descriptions of potential science applications that could clearly address high priority decision-making needs of our stakeholders and that align with an integrated science focus. Use Cases are not actionable science planning documents, nor stand-alone scholarly works, but should be considered as innovative, next-generation science ideas that can be considered as potential components of science plans still under development. The goal of Use Case development was to (1) identify and characterize existing USGS scientific capacities and expertise that can support science goals and products, (2) identify opportunities to leverage current capacities for next-generation science, and (3) foster engagement across the entire Bureau to further refine the USGS strategy for EarthMAP and integrated predictive science. The Use Case development effort documented in this report was coordinated by the Use Case Development Team (UCDT), consisting of representatives from each region. The UCDT undertook five tasks: (1) develop a unified approach to engage bureau scientists consistently across all regions in aspirational thinking about what can be accomplished; (2) work with the regions and their Science Centers to generate an initial set of Use Cases, authored directly by scientists; (3) characterize, summarize, and document the initial set of Use Case submissions from authors to illuminate bureau-level demand for integrated science; (4) compare existing and needed capacities from the Use Case descriptions with preliminary results of the EarthMAP Capacity Assessment (Keisman and others, 2021); and (5) describe lessons learned from the Use Case development process and provide recommendations to inform future efforts to generate integrated science activities. This report outlines the approach the UCDT developed to solicit Use Cases from the regions and summarizes the high-level qualitative findings from this first-round effort. The UCDT received 36 Use Cases from the regions and identified potential points of convergence and commonalities considered useful in making connections among the participating scientists. The Southwest (SW) Region and the Rocky Mountain (RM) Region asked scientists to give special consideration to Use Cases with applicability to the Colorado River Basin, and seven of the Use Cases specifically named that geographic area as a focus. Coastal hazards and coastal resilience were identified in Use Cases from the Alaska (AK), Northeast (NE), and Southeast (SE) Regions. Aspects of wildfire and post-wildfire response were part of Uses Cases from AK, RM, and SW Regions. The greatest convergence of Use Case themes was related to conservation of public lands and waters, which is a powerful linkage lending strength to future collaborative efforts. The most common type of stakeholder decisions that would be informed by the Use Case science applications were related to adaptation, mitigation, and response (for example, how to increase the resilience of coastal communities to climate-related stressors and how to prevent or respond to harmful algal blooms). Other common types of decisions included water and land management decisions (including operational water management decisions such as reservoir operations and land use planning in the sagebrush biome), decisions about how to manage and conserve habitats and species, and risk management decisions (such as managing the post-wildfire flood risks). These decision types are not exclusive because many Use Cases cross categories. Use Case authors identified existing and needed science and technology capabilities required for Use Case implementation, which were then aligned to capabilities assessed in the EarthMAP Capacity Assessment (Keisman and others, 2021). Strong alignment was found for data and information integration approaches, modeling and prediction approaches, and capabilities related to delivery of actionable information. A majority of Use Cases indicated insufficient current capacity for needed data collection methods, data integration, and modeling and prediction approaches, whereas only 25 percent indicated insufficient capacity for actionable information delivery. Overall, many Use Case capacity demand gaps could potentially be met by existing bureau-wide capacity. In addition, nearly half of the Use Cases could potentially be implemented within 3 years if funding, capabilities, and personnel impediments were removed and science priorities were realigned. Several challenges emerged during the Use Case development process. The first challenge was developing an approach that was flexible enough to accommodate regional differences in planning and implementation, while also ensuring enough guidance to promote meaningful summary analyses. The UCDT encountered a strong demand for continuous communication and education to improve overall understanding of the integrated predictive science strategy. Another challenge was managing expectations about EarthMAP activities as a design effort that was not aligned to an immediate funding opportunity. Connecting the Use Cases to stakeholder needs without the opportunity for direct stakeholder engagement was also challenging. The last notable challenge was in obtaining consistent interpretation and characterization of the qualitative data housed in the narrative descriptions of Use Cases, written in different styles. Overall, the 36 Use Cases can serve as components of a road map for advancing integrated monitoring and predictive science throughout the USGS by revealing opportunities to (1) encourage cross-region initiatives that address shared interests in common themes by integrating similar Use Cases and through direct involvement of stakeholders in identifying needs and designing effective responses, (2) leverage the Use Cases to target investments that are aligned with the Bureau and Department of the Interior (DOI) priorities, (3) connect Use Cases and the results of the companion EarthMAP Capacity Assessment (Keisman and others, 2021) to identify potential priorities for capacity building investments, and (4) raise awareness of common integrated and interdisciplinary science interests within and across the regions through Use Case and Capacity Assessment summary outreach activities.

Open-File Report↗
USGS2021

Annual winter water-level drawdowns influence physical habitat structure and macrophytes in Massachusetts, USA, lakes

Annual wintertime water-level drawdowns are a common management strategy in recreational lakes; however, few studies have estimated their relative impact on lake littoral habitat among a set of typically co-occurring anthropogenic stressors including lakeshore development and herbicide application. Within 21 Massachusetts, USA lakes that represented a drawdown magnitude gradient (0.07–2.26 m), we assessed depth-specific littoral habitat (coarse wood, sediment, macrophytes) at two sites adjacent to forested or developed shorelines. Using generalized linear mixed models, we found coarse wood abundance and branching complexity was not correlated with drawdown magnitude but was primarily explained by the presence of lakeshore development. Drawdown magnitude was negatively correlated with silt cover and positively correlated with coarse substrate cover, with effects further varying by depth (0.5 m vs. 1 m). Macrophyte biomass and biovolume were negatively correlated with drawdown magnitude with effects also varying by depth for biomass. Macrophyte taxa with annual longevity strategies (e.g., Najas flexilis ) and amphibious growth forms increased in biomass proportions with drawdown magnitude. Distance-based redundancy analyses suggested macrophyte taxa composition was driven by drawdown magnitude, coarse substrate, alkalinity, water transparency, and herbicide use. These results suggest the importance of water quality and depth on macrophyte assemblage responses to winter drawdowns and the potential to develop drawdown-tolerant macrophyte assemblages. Altogether, understanding the unique impacts of anthropogenic stressors on littoral zone habitat across heterogeneous environmental lake conditions can help minimize impacts to lake ecological integrity while maintaining recreational value.

Massachusetts↗
USGS2019

Semiautomated process for enumeration of fishes from recreational-grade side-scan sonar imagery

The use of hydroacoustic techniques is increasing as scientists search for less invasive ways to monitor fish populations, and using recreational side‐scan sonar (SSS) imagery for monitoring has become more common in aquatic resource management over the last 15 years due in part to its low cost and user‐friendly interface. The time‐consuming nature of manually counting fish targets has limited the use of the data that is collected by these systems in research or management contexts. To reduce the time and effort that is required to enumerate acoustic targets that are presumed to be fish, we developed a semiautomated process that rapidly quantifies targets from recreational SSS imagery by using an open‐source image processing software. Perceived fish targets were enumerated using a set of macroinstructions that performed similarly to manual enumeration by three experienced assessors. This method reduced variation that arises from individual assessors and eliminated the prohibitive time constraints that are associated with manual processing. Herein, we describe how our semiautomated process could be used in fisheries management contexts after further research and development of sampling methods. Future research will focus on field validation, quantifying relative abundance, testing across a broader range of environmental conditions, and exploring other applications for fisheries management.N

North American Journal of Fisheries Management↗
USGS2024

Modeling the potential spread of the non-native regal demoiselle, Neopomacentrus cyanomos, in the western Atlantic

Predicting the potential distribution of a non-native species can assist management efforts to mitigate impacts on recipient ecosystems. However, such predictions are lacking for marine species, such as the non-native regal demoiselle, Neopomacentrus cyanomos , that is currently expanding its distribution in the western Atlantic. We used correlative species distribution models with three common algorithms to predict suitable habitat for N. cyanomos in the region. We compared models developed using native, non-native, and global occurrences to differentiate drivers across separate ranges using a suite of 12 environmental characteristics. While final models included an ensemble of variables, the majority ranked the combined effect of temperature variables as a key predictor correlated with the distribution of N. cyanomos. Habitat suitability increased as water temperatures increased beyond 16 °C and where annual thermal ranges were greater than 10 °C at the shallowest depth with substrate within a study cell (~ 9.2 km 2 resolution). Habitat suitability also increased where maximum surface temperatures were greater than 27 °C. In the non-native range, the proportion of reef available in each cell was another important variable increasing the suitable habitat for N. cyanomos . Our models predicted high habitat suitability for N. cyanomos throughout the Greater Caribbean, in higher latitudes along North and South American Atlantic coasts, in the eastern Pacific Ocean, and highlights key areas where managers can monitor and target potential removal efforts. The distribution of this non-native species is likely to continue expanding throughout the region with little known about potential implications on native communities.

Coral Reefs↗
USGS2012

Predicting biological condition in southern California streams

As understanding of the complex relations among environmental stressors and biological responses improves, a logical next step is predictive modeling of biological condition at unsampled sites. We developed a boosted regression tree (BRT) model of biological condition, as measured by a benthic macroinvertebrate index of biotic integrity (BIBI), for streams in urbanized Southern Coastal California. We also developed a multiple linear regression (MLR) model as a benchmark for comparison with the BRT model. The BRT model explained 66% of the variance in B-IBI, identifying watershed population density and combined percentage agricultural and urban land cover in the riparian buffer as the most important predictors of B-IBI, but with watershed mean precipitation and watershed density of manmade channels also important. The MLR model explained 48% of the variance in B-IBI and included watershed population density and combined percentage agricultural and urban land cover in the riparian buffer. For a verification data set, the BRT model correctly classified 75% of impaired sites (B-IBI < 40) and 78% of unimpaired sites (B-IBI = 40). For the same verification data set, the MLR model correctly classified 69% of impaired sites and 87% of unimpaired sites. The BRT model should not be used to predict B-IBI for specific sites; however, the model can be useful for general applications such as identifying and prioritizing regions for monitoring, remediation or preservation, stratifying new bioassessments according to anticipated biological condition, or assessing the potential for change in stream biological condition based on anticipated changes in population density and development in stream buffers.

California↗
USGS2001

Effects of thermal regime on ovarian maturation and plasma sex steroids in farmed white sturgeon, Acipenser transmontanus

Recently, commercial aquaculture farms in Northern California have exposed gravid, cultured white sturgeon females to cold water (12 ?? 1??C) throughout the late phase of vitellogenesis and ovarian follicle maturation resulting in improved ovulation rates and egg quality. However, the optimum timing for transfer of broodfish to the cold water and the capacity of transferred broodfish to maintain reproductive competence over an extended time in cold water had not been evaluated. Gravid white sturgeon females that have been raised at water temperatures of 16-20??C were transported to either cold water (12 ?? 1??C; Group 1) in November 1997 or maintained in ambient water temperatures (10-19??C; Group 2) until early spring. In March 1998, half of the fish in Group 2 had regressed ovaries, but the remaining females had intact ovarian follicles and were transported to the cold water. Ovarian follicles and blood were collected from females until they reached the stage of spawning readiness (determined by germinal vesicle position and an oocyte maturation assay) or underwent ovarian regression. Exposure of gravid sturgeon females to ambient water temperatures (14.5 ?? 2.3??C, mean ?? S.D.) from October to March led to a decrease in plasma sex steroids and a high incidence of ovarian regression in fish with a more advanced stage of oocyte development. Transfer of females with intact ovarian follicles to cold water (12 ?? 1??C) in the fall or early spring resulted in normal ovarian development in the majority of females. Holding females in cold water does not seem to override their endogenous reproductive rhythms but extends their capacity to maintain oocyte maturational competence over a longer period of time. A temperature-sensitive phase in ovarian development may occur during the transition from vitellogenic growth to oocyte maturation, and the degree and timing of sensitivity to environmental temperature are dependent on the female's endogenous reproductive rhythm. ?? 2001 Elsevier Science B.V. All Rights reserved.

Aquaculture↗
USGS2003

Fitting population models from field data

The application of population and community ecology to solving real-world problems requires population and community dynamics models that reflect the myriad patterns of interaction among organisms and between the biotic and physical environments. Appropriate models are not hard to construct, but the experimental manipulations needed to evaluate their defining coefficients are often both time consuming and costly, and sometimes environmentally destructive, as well. In this paper we present an empirical approach for finding the coefficients of broadly inclusive models without the need for environmental manipulation, demonstrate the approach with both an animal and a plant example, and suggest possible applications. Software has been developed, and is available from the senior author, with a manual describing both field and analytic procedures.

Ecological Modelling↗
USGS2021

Optical properties of water for prediction of wastewater contamination, human-associated bacteria, and fecal indicator bacteria in surface water at three watershed scales

Relations between spectral absorbance and fluorescence properties of water and human-associated and fecal indicator bacteria were developed for facilitating field sensor applications to estimate wastewater contamination in waterways. Leaking wastewater conveyance infrastructure commonly contaminates receiving waters. Methods to quantify such contamination can be time consuming, expensive, and often nonspecific. Human-associated bacteria are wastewater specific but require discrete sampling and laboratory analyses, introducing latency. Human sewage has fluorescence and absorbance properties different than those of natural waters. To assist real-time field sensor development, this study investigated optical properties for use as surrogates for human-associated bacteria to estimate wastewater prevalence in environmental waters. Three spatial scales were studied: Eight watershed-scale sites, five subwatershed-scale sites, and 213 storm sewers and open channels within three small watersheds (small-scale sites) were sampled (996 total samples) for optical properties, human-associated bacteria, fecal indicator bacteria, and, for selected samples, human viruses. Regression analysis indicated that bacteria concentrations could be estimated by optical properties used in existing field sensors for watershed and subwatershed scales. Human virus occurrence increased with modeled human-associated bacteria concentration, providing confidence in these regressions as surrogates for wastewater contamination. Adequate regressions were not found for small-scale sites to reliably estimate bacteria concentrations likely due to inconsistent local sanitary sewer inputs.

Michigan, New York, Ohio, Wisconsin↗