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Separating signals in elevation data improves supervised machine learning predictions for hydrothermal favorability

A recent study identified topography (land surface elevation above sea level) as an important input dataset (feature) for predicting the location of hydrothermal systems in the Great Basin in Nevada. Yet, topography is generally a result of more than one geological process and may consequently contain multiple distinct signals. For example, the geologic evolution of the Great Basin has produced both crustal thickening (i.e., regional-scale trends in elevation) and thinning via Basin and Range extensional faulting (i.e., valley-scale topographic relief). We postulate that these geologic processes may affect the occurrence of hydrothermal systems differently. Therefore, we separate the regional trend from the valley-scale signal in the Great Basin, and then use them separately to evaluate the importance of each as predictors for hydrothermal favorability. Our prior work applying supervised machine learning (ML) using the data from the Nevada Machine Learning Project demonstrated that employing a training strategy that randomly selects negative training sites produces better performing models for predicting hydrothermal favorability than a training strategy that uses expert-selected negatives. The models created using both training strategies exhibited a west-east geographic trend in the predictions for the favorability of hydrothermal resources. These models generally predicted higher favorability in western Nevada and lower favorability in eastern Nevada. This west-east trend in predicted favorability correlates with elevation across the Great Basin, which trends higher from west to east. By separating the original elevation feature into distinct features for elevation trend (i.e., regional-scale topography) and detrended elevation (i.e., valley-scale or local relative topography), we find that models using the separated topographic signals consistently outperform competing models that use the original elevation feature. Although western Nevada still exhibits higher favorability than eastern Nevada, using separated signals for regional elevation and local structure reduces the west-east prediction trend in the region and emphasizes structures associated with hydrothermal upflow. This work emphasizes how carefully engineering features to represent geological conditions relevant to hydrothermal systems allows ML algorithms to detect important patterns for predicting hydrothermal resource favorability and leads to better model performance.

Conference Paper

Methods for estimating selected low-flow statistics at gaged and ungaged stream sites in Massachusetts

The U.S. Geological Survey, in cooperation with the Massachusetts Department of Conservation and Recreation, Office of Water Resources, computed selected at-site streamflow statistics at U.S. Geological Survey streamgages in and near Massachusetts and developed regional regression equations for estimating selected streamflows at ungaged stream sites in Massachusetts. Two sets of regional regression equations were developed: (1) the “mainland” equations, for mainland Massachusetts excluding the area covered by the second set, and (2) the “southeastern” equations, for the Plymouth-Carver-Kingston-Duxbury aquifer area in southeastern Massachusetts and for Cape Cod. The regression equations and at-site statistics may be used by Federal, State, and local water managers in addressing water-resources issues relevant in Massachusetts. Regional regression analyses for the mainland equations were developed to estimate the following 27 streamflow statistics: 99-, 98-, 95-, 90-, 85-, 80-, 75-, 70-, 60-, and 50-percent flow durations; monthly June, July, August, and September 90- and 50-percent flow durations; February, June, and August median of the monthly means; harmonic mean; and medians of the following annual low-flow frequency statistics: 7-day; 7-day, 2-year; 7-day, 10-year; 30-day, 2-year; and 30-day, 10-year. The analyses used 81 streamgages with minimal to no regulations in and near Massachusetts. The regression analyses determined that four basin characteristics—drainage area, combined hydrologic soils A and B, streamflow variability index, and annual mean temperature—were the only significant explanatory variables for the different mainland equations. Regional regression equations were developed for the Plymouth-Carver-Kingston-Duxbury aquifer area in southeastern Massachusetts and Cape Cod, because surface-water drainage areas and groundwater contributing areas do not always coincide in this area of the State. The regression analyses to estimate 10 flow durations from the 99th to 50th percentiles used 18 streamflow sites with some occasional minor regulations—because there are few unregulated streams in southeastern Massachusetts. The analyses determined that groundwater contributing area and storage (combined water bodies and wetlands) were the only significant explanatory variables in the southeastern equations.

Massachusetts

PFAS mixture composition and internal exposure profiles shape biological responses under field-realistic exposure

Per- and polyfluoroalkyl substances (PFAS) occur as complex mixtures, yet mixture-dependent biological effects under environmentally realistic exposure conditions remain poorly understood. We conducted multiyear (2018, 2019, 2021) continuous-flow, field-based exposures of male fathead minnows ( Pimephales promelas ) using a low-PFAS reference well (REF; sum of measured PFAS (∑PFAS) 0.1–0.2 μg L –1 ) and PFAS-contaminated groundwater from a fire-training area (FTA) at Joint Base Cape Cod, Massachusetts. Dilution treatments enabled separation of concentration and mixture effects. Groundwater from well FTA1 was perfluorooctanesulfonate (PFOS) dominated (∑PFAS 10–31 μg L –1 ), whereas groundwater from well FTA2 had higher concentrations and was enriched in perfluorooctanoate (PFOA) and diverse precursors (∑PFAS ∼ 80 μg L –1 ). Despite comparable plasma ∑PFAS and PFOS in FTA1–100% and FTA2–50% on day-7, cumulative mortality reached approximately 35% in FTA2–50% and 17% in FTA2–100%, and secondary sex trait expression was reduced by approximately 65–80% relative to REF, whereas sperm motility effects were mixture- and time-dependent. Plasma PFAS profiles were dominated by perfluorohexanesulfonate (PFHxS), PFOS, and sulfonamide precursors. Liver transcriptomics from REF-acclimated fish revealed robust disruption of metabolic, mitochondrial, and endocrine pathways that link PFAS mixture chemistry and internal exposure profiles to organismal outcomes, and testis transcriptomics provided complementary insight into reproductive impairment. These results indicate that PFAS mixture composition and internal exposure profiles, including precursor-associated differences, are important determinants of ecotoxicological outcomes under field-realistic conditions.

Massachusetts

“Leaky weirs” capture alluvial deposition and enhance seasonal mountain-front recharge in dryland streams

“Leaky weirs” are rock structures installed in dryland streams, which are anchored into exposed bedrock, loosely cemented, and designed to allow water to slowly pass through. They are being tested at a ranch in southeastern Arizona, USA, to restore and conserve the historic range and desert wetlands. Data are collected to assess how leaky weirs impact surface water, subsurface water, and groundwater recharge—including stream discharge, timing, and depth of infiltration, and groundwater elevations. Three adjacent watersheds, two with outlets just below leaky weirs and one with leaky weirs farther upstream, were instrumented with water-level loggers, wildlife cameras, and crest stage instruments with temperature sensors in the soil. As most groundwater recharge is assumed to be focused along the mountain fronts in this region, mountain-block recharge is also evaluated to differentiate between the two using isotope analyses. Finally, a single, late-season flood event is scrutinized to consider the leaky weir effect on all monitored components in the water budget. Results indicated groundwater flow is primarily from the mountains to the east via older, regional mountain-block recharge. However, the development of shallow alluvial aquifers is supported by the leaky weirs, that slow flows, capture permeable sediments, and allow infiltration, thus enhancing mountain-front recharge. In turn, these new pockets of water help support the restoration of historic wetlands. Sediment accumulates where leaky weirs are installed, reducing flashy peak flows, and resulting in a series of infiltration ponds along the channel that support vegetation during growing seasons and recharge the shallow aquifer during non-growing seasons.

Arizona

Measuring stress In high pressure deformation experiments with high speed fiber-optics

High‐pressure, high‐temperature rock deformation experiments are essential for understanding deep Earth processes, but accurately measuring stress is challenging due to the inaccuracy introduced by seal friction within the apparatus and large inertia, which affects earthquake process measurements made far from the experimental fault. To overcome these limitations, we developed and implemented a simple, compact fiber‐optic sensor based on an External Cavity Fabry–Perot Interferometer for in situ load measurement on a piston inside the pressure vessel of a Griggs‐type high‐pressure apparatus. The sensor can be used at sample temperatures up to 800°C for both slow creep and fast rupture testing with bandwidth capability from DC to 6 MHz. Two important experimental results are described: (1) the first direct measurements of seal friction in this apparatus type; these measurements record seal friction approximately one‐tenth of the confining pressure under both low (150 MPa) and high (1 GPa) pressure conditions; and (2) high‐temporal resolution capture of dynamic stress drops during stick‐slip faulting events at high‐confining pressure, revealing near‐fault wave propagation details, high‐frequency oscillations, and implying high‐transient slip rates (6–12 m/s) previously inaccessible with external sensors.

The Seismic Record

Season and antecedent conditions impact concentration-discharge relationships for dissolved organic carbon and alkalinity in southeast Alaskan watershed

Fluvial export of dissolved carbon plays an important role in watershed-scale biogeochemistry. Predicted changes in climate are expected to impact watershed hydrologic regimes, and in turn, the sources and export of dissolved carbon from watersheds. Here, we utilize high resolution measurements of discharge and dissolved carbon concentration to examine how concentration-discharge (CQ) relationships vary seasonally and during high flow events over the main runoff season (May–October) in a temperate forested watershed in Southeast Alaska. Concentration-discharge relationships for dissolved organic carbon (DOC) and alkalinity demonstrated strong seasonal patterns, with more linear relationships in May and June versus other months. Changing power law model slopes ( b values; the exponent in a power law regression between runoff and carbon yields) indicated potentially shifting watershed sources (biogenic vs. geologic) and contrasting dominant flowpaths (shallow vs. deeper groundwater) for DOC and alkalinity over the sampling period. During the largest storm event of the study, DOC and alkalinity b values shifted from an overall pattern of transport (mean b = 1.58 values >1.0 indicate transport limitation) and source limitation (mean b = 0.48, values <1.0 indicate source limitation) to chemostatic (DOC, b = 0.99; alkalinity, b = 1.019). In June through August, patterns in hysteresis index suggest that CQ relationships were altered when storms followed in close succession to each other. Together, these findings indicate that seasonal and antecedent flow conditions play a role in dissolved carbon export from forested watersheds. Understanding these dynamics, particularly during winter months, will become increasingly important as changes to hydroclimate impact riverine carbon export.

Alaska

Ductile and brittle Rio Grande Rift deformation in Oligocene granite records a two-stage rift history in southern Colorado

The timing and nature of early deformation in the Rio Grande Rift remains poorly constrained. We present evidence for the earliest structural signature of rift extension in the Sangre de Cristo Range, southern Colorado, based on new geologic mapping, structural analysis, rock magnetic data, and thermochronology. These analyses focus on the ~30.0 Ma granite of Chokecherry Canyon, which hosts discrete low-angle mylonitic shear zones and a distributed, gently SW-dipping protomylonitic fabric. Incremental stretching axes, stretching lineations, and Kmax magnetic lineations plunge gently WSW. Quartz microstructures and crystallographic orientations indicate dominantly coaxial strain in the protomylonite and general shear in the discrete shear zones. Quartz c-axis opening-angle thermometry suggests deformation at ~420–540°C. Thermal modeling of ⁴⁰Ar/³⁹Ar K-feldspar data indicates rapid post magmatic cooling below the brittle–plastic transition, supporting shear-zone formation immediately after emplacement. Slow cooling from ~20–13 Ma was followed by renewed rapid cooling at ~13 Ma, interpreted as the onset of extensional exhumation along the Sangre de Cristo Fault System. These results show that extension in the northern Rio Grande Rift was active by ~30 Ma, earlier than previously recognized. We propose a two-stage model for northern Rio Grande Rift evolution: Stage I (30–23 Ma) records ENE–WSW extension localized in low-angle mylonitic shear zones associated with mid-crustal intrusions; Stage II (≤18 Ma) reflects brittle high-angle normal faulting, focused exhumation, and rift narrowing. Stage I magmatism and deformation along the western range front likely established crustal weaknesses that guided later fault development.

Colorado

Extreme precipitation variability and soil texture controls on water-table response

Extreme precipitation events (EPEs), a key class of hydrometeorological extremes, are intensifying globally under climate change; however, their effects on water-table dynamics across varying soil textures remain poorly understood. To better understand the impacts of EPEs, we conducted one-dimensional modeling to evaluate water-table response time, displacement, recession time, and total recharge under EPEs of 0.20 m, 0.40 m, and 0.60 m amounts, applied over 1-, 7-, and 20-day durations across twelve soil textures. The results show that coarse soils (i.e., sand) respond within days, while fine soils (i.e., clay) may take over 200 days. Water-table displacement ranged from 0.30 to 1.64 m and increased with EPE magnitude. The time it took for water tables to recede ranged from 1.2 to 3.0 years. A first-order estimate of total possible recharge, calculated from porosity and displacement, ranged from 17% (clay) to 97% (sand), averaging ~63% across soil textures. These findings highlight that recharge is primarily governed by EPE magnitude and soil properties, not event duration. This modeling effort provides new insight into how soil texture modulates groundwater response to extreme precipitation, informing future water budget and resilience assessments.

Water

Methods and guidelines for effective model calibration; with application to UCODE, a computer code for universal inverse modeling, and MODFLOWP, a computer code for inverse modeling with MODFLOW

This report documents methods and guidelines for model calibration using inverse modeling. The inverse modeling and statistical methods discussed are broadly applicable, but are presented as implemented in the computer programs UCODE, a universal inverse code that can be used with any application model, and MODFLOWP, an inverse code limited to one application model. UCODE and MODFLOWP perform inverse modeling, posed as a parameter-estimation problem, by calculating parameter values that minimize a weighted least-squares objective function using nonlinear regression. Minimization is accomplished using a modified Gauss-Newton method, and prior, or direct, information on estimated parameters can be included in the regression. Inverse modeling in many fields is plagued by problems of instability and nonuniqueness, and obtaining useful results depends on (1) defining a tractable inverse problem using simplifications appropriate to the system under investigation and (2) wise use of statistics generated using calculated sensitivities and the match between observed and simulated values, and associated graphical analyses. Fourteen guidelines presented in this work suggest ways of constructing and calibrating models of complex systems such that the resulting model is as accurate and useful as possible.

Water-Resources Investigations Report

Telecommunications fiber for sensing earthquake aftershocks: Progress and hurdles

Aftershocks offer valuable clues to earthquake behavior. The challenge: quickly deploying sensors to capture the early details of earthquake ruptures within the zone of aftershocks. Telecommunication fibers might be an answer, providing denser networks in otherwise difficult areas, potentially faster than traditional methods.

Conference Paper

CRESCENT earthquake dynamic rupture, earthquake cycle, and tsunami code verification platform

Physics-based simulations are critical for understanding natural hazards. The increasing complexity of numerical codes requires benchmark exercises to verify that different computational methods yield consistent results when solving the same governing equations. Here, we present an open-access web platform designed for the verification of earthquake dynamic rupture, seismic cycle, and tsunami simulations. The platform architecture utilizes a modular, serverless backend on Amazon Web Services (AWS) to provide scalable file processing and visualization. A lightweight static web application provides a secure interface for uploading and managing results, while the browser-based data visualization enables interactive analysis of time series and surface grid data. By using structured JavaScript Object Notation (JSON) text files to define benchmark structures, the system remains fully extensible, allowing the addition of new scenarios without modifying the underlying software logic. The platform hosts the "The Tsunami Problem Versions" (TTPV) 1 & 2, two benchmarks for 3D fully coupled earthquake dynamic rupture and tsunami generation, and provides a framework for earthquake cycle models. This community resource aims to build trust in numerical simulations and facilitate long-term collaborative code verification as modeling software continues to evolve.

Seismica

Preventing overfitting when using tree-based methods for mapping hydrothermal favorability

Ensemble tree-based algorithms are robust tools for estimating sparsely distributed resources with non-linear dependencies (e.g., hydrothermal systems). These algorithms naturally accommodate the threshold conditions necessary to enable and support hydrothermal systems (e.g., having sufficient heat and permeability) and are simpler than many other non-linear machine learning strategies (e.g., artificial neural networks), which is an advantage when working with few labeled examples from which to learn. In previous work, we used eXtreme Gradient Boosting (XGBoost) to produce regional prediction and uncertainty maps of hydrothermal favorability; however, recent studies suggest that, even when properly applied, XGBoost has some risk of overfitting when there are few labeled examples from which to learn. To evaluate overfitting when constructing hydrothermal favorability maps with tree-based methods, we compare XGBoost with Extremely Randomized Trees (ExtraTrees), another ensemble tree-based algorithm that has the potential to underfit when using few labeled examples. We hold all other modeling parameters constant, resulting in two contrasting favorability maps of conventional geothermal resources for the Great Basin. Our results indicate that ExtraTrees demonstrably reduces overfitting compared with XGBoost. After considering overall performance, we conclude that ExtraTrees provides a more suitable modeling approach than XGBoost for the purposes of conventional hydrothermal resource assessments.

Conference Paper

A practical framework for identifying genetic subpopulations and ESUs: Insights for IUCN assessments and broader management

Species conservation assessments evaluate extinction risk, and recovery potential, advancing species persistence through guiding resource prioritization and planning. Assessment frameworks, including the International Union for Conservation of Nature Red List and Green Status of Species, typically focus on species as a whole. Importantly, they do not routinely account for genetically distinct units or do not have standardized methods of unit delineation. This limits the representation of genetically distinct components, including adaptive genetic diversity that underpins long-term resilience and recovery. Incorporating standardized within-species units like subpopulations and Evolutionarily Significant Units (ESUs) into species assessments could help address this oversight. However, identifying and delineating such units remain challenging, particularly when molecular data are limited. Here, we propose a flexible framework that integrates molecular and non-molecular evidence to identify both subpopulations and ESUs across taxa, providing a practical tool to incorporate within-species diversity into conservation assessments.

BioScience

Land-based nutrient flux to a fringing reef: Insights from Ofu Island, American Samoa

Submarine groundwater discharge (SGD) is a critical driver of nutrient transport in coral reef ecosystems, shaping water quality, primary productivity, and overall reef health. This study quantifies SGD fluxes and associated nutrient dynamics in two reef flat pools within the Ofu Unit of the National Park of American Samoa: Papaloloa and Fatuana. A multi-method approach integrating unoccupied aerial system-based thermal infrared (UAS-TIR) surveys, radon-based SGD measurements, multichannel electrical resistivity tomography (ERT), and discrete water sampling was used to assess SGD rates and nutrient contributions. UAS-TIR imagery revealed cooler sea surface temperatures in both pools, indicative of SGD, with the higher fluxes observed in Papaloloa. Radon measurements revealed a strong inverse correlation between SGD rates and tidal stage, with a more immediate SGD response at Papaloloa due to its highly permeable calcareous sand and gravel substrate. In contrast, a 2–3-hour lag in SGD response at Fatuana suggests discharge from a more inland aquifer that has lower diffusivity. Nutrient concentrations correlated with temperature and salinity, confirming SGD as the dominant nutrient transport mechanism, whereas isotopic analyses indicated inputs from both groundwater and potential anthropogenic sources. Despite lower SGD flux at Fatuana, higher algal cover suggests additional factors influencing algal proliferation, including substrate availability and hydrodynamic conditions. Excess nutrient inputs from SGD may contribute to algal overgrowth, which threatens Ofu’s thermally tolerant corals by increasing competition for space and light. These findings underscore the complexity of SGD-mediated nutrient dynamics in reef environments and emphasize the need for integrated hydrological and ecological assessments to support effective reef conservation and management strategies.

American Samoa, Ofu Island, Olosega Island

Reduced injection rates and shallower depths mitigated induced seismicity in Oklahoma

The proximity of wastewater disposal to the Precambrian basement is a critical factor influencing induced earthquake rates in the Central United States, but the impact of reducing injection depths has not been widely demonstrated. Beginning in 2015, state regulatory efforts in Oklahoma and Kansas mandated that wells injecting into the lower Arbuckle Group, a basal sedimentary unit, be backfilled with cement (i.e. “plugged back”) so that they inject into shallower formations. This plug back activity gives us a unique opportunity to investigate the relationship between injection depth and induced seismicity rate. To evaluate the impact that decreased injection rates and plug backs had on the seismicity rates, we create a suite of rate-state earthquake models. Observed seismicity rates are best fit when only lower Arbuckle volumes are considered, suggesting the lower Arbuckle injectors were primarily responsible for the seismicity and that plug backs were effective at isolating the injected volumes to shallower formations. Our models demonstrate that if these wells had not been plugged back, seismicity rates would be multiple times larger than they are today. We find that the combination of well plug backs and injection volume decreases can be effective strategies for reducing induced seismicity rates.

Oklahoma

Correction to A regime shift in sediment export from a coastal watershed during a record wet winter, California: Implications for landscape response to hydroclimatic extremes

In the referenced article, the authors would like to correct text in the first paragraph on page 2571, Figure 9 and its caption. The changes reflect an error made in the processing of the rainfall intensity-duration data used to compare storms to published debris flow triggering thresholds. The correctly processed data does not change the interpretations made in the paper but does correctly indicate that the investigated storms did not exceed the rainfall intensity – duration threshold of Cannon (1988) but did significantly exceed the debris flow triggering threshold of Wieczorek (1987).

Earth Surface Processes and Landforms

USGS addresses needs for lithium calibration and quality control materials for pLIBS analysis

Lithium (Li) is a globally important commodity used for energy storage, national defense, human health, and advanced technologies. Lithium resource development requires identifying deposits with elevated concentrations and optimal mineralogy, typically associated with select clays and pegmatites. Lithium is a light, highly reactive alkali metal with low atomic mass that is difficult to detect and quantify using conventional portable geochemical techniques such as X-ray fluorescence (XRF). However, portable laser-induced breakdown spectroscopy (pLIBS) is a powerful analytical technique for lithium exploration due to its ability to analyze solids quickly with minimal preparation. The expanded utility of pLIBS is hampered by the lack of matrix-matched calibration and quality control (QC) materials. The United States Geological Survey (USGS) has developed in-house lithium calibration and QC materials for lithium in clay and pegmatite matrices to address this limitation. We present the workflow and implementation of a custom-built matrix specific calibration on a SciAps Z-300 pLIBS, using proprietary Profile Builder software. The implementation of the custom calibration and quality control standards enables us to collect semiquantitative results directly from the pLIBS while in the field. Ultimately, this calibration has improved confidence in sample selection and collection in the field, providing more efficient site characterization.

Conference Paper

A diatom-based quantitative sea-ice proxy for the Bering and Chukchi seas

Sea ice affects Earth's climate system on both regional and global scales. Its incorporation into climate can be used to achieve more accurate predictions of future climate. However, instrumental records of sea-ice concentration do not extend earlier than 1978. In an effort to extend this record, we constructed a proxy using the generalized additive model based on relative abundances of five easy-to-identify diatom species found in sediment samples across the Bering and Chukchi seas. Here we present the first quantitative diatom-based sea-ice proxy developed for Beringia. The developed proxy has been applied to two sediment cores in the Bering Sea ranging from 0 to 25.7 ka (HLY0204 51JPC) and 369 to 430 ka (IODP Exp 323 Site U1345) and one in the Chukchi Sea ranging from 2.7 to 10 ka (HLY0204 24JPC). The obtained reconstructions of sea-ice concentrations are similar, but not identical to previously published qualitative and nearby records based on other proxies. Because our results are quantitative, they can be incorporated into regional climate models. The proxy is publicly available as an R Shiny application (app) and can be applied to any diatom count from marine sediments in the region.

Bering Sea, Chukchi Sea