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USGS2009

Carbon isotope turnover as a measure of arrival time in migratory birds

Arrival time on breeding or non-breeding areas is of interest in many ecological studies exploring fitness consequences of migratory schedules. However, in most field studies, it is difficult to precisely assess arrival time of individuals. Here, we use carbon isotope turnover in avian blood as a technique to estimate arrival time for birds switching from one habitat or environment to another. Stable carbon isotope ratios (δ 13 C) in blood assimilate to a new equilibrium following a diet switch according to an exponential decay function. This relationship can be used to determine the time a diet switch occurred if δ 13 C of both the old and new diet are known. We used published data of captive birds to validate that this approach provides reliable estimates of the time since a diet switch within 1–3 weeks after the diet switch. We then explored the utility of this technique for King Eiders ( Somateria spectabilis ) arriving on terrestrial breeding grounds after wintering and migration at sea. We estimated arrival time on breeding grounds in northern Alaska (95% CI) from red blood cell δ 13 C turnover to be 4–9 June. This estimate overlapped with arrival time of birds from the same study site tracked with satellite transmitters (5–12 June). Therefore, we conclude that this method provides a simple yet reliable way to assess arrival time of birds moving between isotopically distinct environments.

Journal of Ornithology↗

USGS2004

Land use change and terrestrial carbon stocks in Senegal

Environmental degradation resulting from long-term drought and land use change has affected terrestrial carbon (C) stocks within Africa's Sahel. We estimated Senegal's terrestrial carbon stocks in 1965, 1985, and 2000 using an inventory procedure involving satellite images revealing historical land use change, and recent field measurements of standing carbon stocks occurring in soil and plants. Senegal was divided into eight ecological zones containing 11 land uses. In 2000, savannas, cultivated lands, forests, and steppes were the four largest land uses in Senegal, occupying 70, 22, 2.7, and 2.3 percent of Senegal's 199,823 km 2 . System C stocks ranged from 9 t C ha −1 in degraded savannas in the north, to 113 t C ha −1 in the remnant forests of the Senegal River Valley. This approach resulted in estimated total C stocks of 1019 and 727 MT C between 1965 and 2000, respectively, indicating a loss of 292 MT C over 35 years. The proportion of C residing in biomass decreased with time, from 55 percent in 1965 to 38 percent in 2000. Calculated terrestrial C flux for 1993 was −7.5 MT C year −1 and had declined by 17 percent over the previous 18 years. Most of the terrestrial C flux in 1993 was attributed to biomass C reduction. Human disturbance accounted for only 22 percent of biomass C loss in 1993, suggesting that the effects of long-term Sahelian drought continue to play an overriding role in ecosystem change. Some carbon mitigation strategies for Senegal were investigated, including potential C sequestration levels. Opportunities for C mitigation exist but are constrained by available knowledge and access to resources.

Journal of Arid Environments↗

USGS2002

Little Galloo Island, Lake Ontario: A review of nine years of double-crested cormorant diet and fish consumption information

The diet of double-crested cormorants ( Phalacrocorax auritus ) on Little Galloo Island (LGI) in the eastern basin of Lake Ontario has been quantified since 1992. Over the past nine years considerable information has been generated on cormorant feeding ecology through the examination of approximately 12,000 pellets collected on LGI, where three distinct cormorant feeding periods, pre-chick, chick, and post-chick, are delineated by differences in diet composition and daily fish consumption. Yellow perch ( Perca flavescens ) were the major prey during pre-chick and post-chick feeding periods. Alewife ( Alosa pseudoharengus ), which move inshore to spawn in mid-June, dominated (>60%) cormorant diets during the chick feeding period. Mean daily fish consumption (14.6) during the pre-chick feeding period was significantly greater than during the chick feeding (9.3) or post-chick feeding (8.0) periods. The proportion of smallmouth bass ( Micropterus dolomieu ) in the diet increased over the season (0.8% to 7.2%), while the size of bass consumed declined (214 mm to 143 mm). Forage fish (mainly alewife, three-spine sticklebacks [ Gasterosteus aculeatus ] and minnows) comprised 58% of the diet of LGI cormorants, followed by panfish (37%) (yellow perch, pumpkinseed [ Lepomis gibbosus ], rock bass [ Ambloplites rupestris ]) and gamefish (5%) (mostly smallmouth bass). On the average LGI cormorants consumed about 32.8 million fish annually, weighing about 1.4 million kilograms. Cormorants from LGI consumed more biomass of smallmouth bass and yellow perch annually than is taken by sport (bass and yellow perch) and commercial (perch) fishermen.

Journal of Great Lakes Research↗

USGS2016

Synthesis of common management concerns associated with dam removal

Managers make decisions regarding if and how to remove dams in spite of uncertainty surrounding physical and ecological responses, and stakeholders often raise concerns about certain negative effects, regardless of whether or not these concerns are warranted at a particular site. We used a dam-removal science database supplemented with other information sources to explore seven frequently-raised concerns, herein Common Management Concerns (CMCs). We investigate the occurrence of these concerns and the contributing biophysical controls. The CMCs addressed are: degree and rate of reservoir sediment erosion, excessive channel incision upstream of reservoirs, downstream sediment aggradation, elevated downstream turbidity, drawdown impacts on local water infrastructure, colonization of reservoir sediments by non-native plants, and expansion of invasive fish. Biophysical controls emerged for some of the concerns, providing managers with information to assess whether a given concern is likely to occur at a site. To fully assess CMC risk, managers should concurrently evaluate site conditions and identify the ecosystem or human uses that will be negatively affected if the biophysical phenomenon producing the CMC occurs. We show how many CMCs have one or more controls in common, facilitating the identification of multiple risks at a site, and demonstrate why CMC risks should be considered in the context of other factors like natural watershed variability and disturbance history.

Journal of the American Water Resources Associatio↗

USGS2000

Piping Plover brood foraging ecology on New York barrier islands

Effective management of piping plover (Charadrius melodus) populations requires knowledge of the habitats that foster successful reproduction. We studied piping plover chick foraging ecology and survival on the central barrier islands of Long Island, New York, 1992 and 1993. Within the 90-km study area, all 1-km beach segments with ephemeral pools or bay tidal flats were used for nesting and brood rearing, whereas <50% of beach segments without these habitats were used. On beach segments with ephemeral pools, broods preferred ephemeral pools to ocean intertidal zone, wrack, backshore, open vegetation, and interdune habitat. Indices of terrestrial arthropod abundance and foraging rates were greater in ephemeral pools than in other habitats. In 1992, chick survival was higher on beach segments with ephemeral pools than on segments without ephemeral pools. On beach segments with bay tidal flats, broods preferred bay tidal flats and wrack to ocean intertidal zone, backshore, and open vegetation habitats. Foraging rates in bay tidal flats were similar to those in ephemeral pools and greater than in open vegetation, wrack, and backshore habitats. On beach segments without ephemeral pools and bay tidal flats, broods preferred wrack to all other habitats, and open vegetation was second most preferred. To assist in the recovery of the piping plover, land-use planners should avoid beach management practices (e.g., beach filling, dune building, renourishment) that typically inhibit natural renewal of ephemeral pools, bay tidal flats, and open vegetation habitats.

New York↗

USGS2015

A new panel of SNP markers for the individual identification of North American pumas

Pumas Puma concolor are one of the most studied terrestrial carnivores because of their widespread distribution, substantial ecological impacts, and conflicts with humans. Over the past decade, managing pumas has involved extensive efforts including the use of genetic methods. Microsatellites have been the most commonly used genetic markers; however, technical artifacts and little overlap of frequently used loci render large-scale comparison of puma genetic data across studies challenging. Therefore, a panel of genetic markers that can produce consistent genotypes across studies without the need for extensive calibrations is essential for range-wide genetic management of puma populations. Here, we describe the development of PumaPlex, a high-throughput assay to genotype 25 single nucleotide polymorphisms in pumas. We validated PumaPlex in 748 North American pumas Puma concolor couguar, and demonstrated its ability to generate reproducible genotypes and accurately identify individuals. Furthermore, in a test using fecal deoxyribonucleic acid (DNA) samples, we found that PumaPlex produced significantly more genotypes with fewer errors than 12 microsatellite loci, 8 of which are commonly used. Our results demonstrate that PumaPlex is a valuable tool for the genetic monitoring and management of North American puma populations. Given the analytical simplicity, reproducibility, and high-throughput capability of single nucleotide polymorphisms, PumaPlex provides a standard panel of markers that promotes the comparison of genotypes across studies and independent of the genotyping technology used.

Journal of Fish and Wildlife Management↗

USGS2005

Productivity and mortality of Northern Goshawks in Minnesota

Compared to other regions of North America, little information exists regarding Northern Goshawk (Accipiter gentilis) ecology and population dynamics in the western Great Lakes Region. We examined productivity and nesting habitat characteristics of goshawks in Minnesota from 1998-2001. Apparent nesting success varied annually from as low as 38% to as high as 83%. The Mayfield estimate of daily survival for nests was 0.992 ?? 0.002 (SE). The mean fledgling number across years was 1.85 ?? 0.14 for successful nests and 1.14 ?? 0.17 for all nesting attempts. Twenty-one percent of all nesting attempts failed, primarily due to predation or suspected predation (52%) and inclement weather (35%). Overall, productivity of goshawks in Minnesota was at the lower end of the range reported in other studies across western North America, which is not atypical for peripheral populations. During the 3-yr study, we recorded mortalities of nine (four males and five females; eight radio-marked and one unmarked) adult goshawks-causes of mortality were avian (33%) and mammalian (22%) predation, human persecution (22%), and unknown causes (22%). Fifty-six percent of mortalities occurred during the breeding season, and 44% occurred during the winter. Based on radiotelemetry data, we estimated adult annual survival to be 74 ?? 7.8%, which is similar to survival estimated using mark-recapture analysis in three western North America studies. ?? 2005 The Raptor Research Foundation, Inc.

Journal of Raptor Research↗

USGS2025

Double agents: Invasive Burmese pythons (Python bivittatus) and Argentine black and white tegus (Salvator merianae) as potential seed dispersers in south Florida

Invasive species can reshape ecological processes, including seed dispersal, through both direct and indirect pathways. In this study, we explore how invasive reptiles influence seed dispersal dynamics in the Greater Everglades ecosystem using two case studies: the Burmese python ( Python bivittatus ) and the Argentine black and white tegu ( Salvator merianae ). Guided by a conceptual framework, we investigate three primary mechanisms through which invasive species may alter seed outcomes: direct seed consumption, predation on seed dispersers before seed ingestion, and secondary seed dispersal via predation on animals that have already consumed seeds. Burmese pythons, as apex predators, may contribute to seed dispersal through diploendozoochory while simultaneously driving trophic cascades that restructure the seed disperser community. Tegus, as omnivorous frugivores, directly consume and disperse a wide diversity of plant seeds. We documented 25 seed morphotypes in python diets and 73 in tegu diets, spanning a broad 38 families and including native, endangered, and invasive plant species. Using a binary interaction network, we found that these reptiles exhibit high generalization, nestedness, and connectance—suggesting they are becoming functionally integrated into Everglades seed dispersal networks. These findings reveal that invasive reptiles not only disrupt native plant–animal interactions but may also reshape them, with implications for ecosystem stability, restoration, and management.

Florida↗

USGS2014

The effects of hydropattern and predator communities on amphibian occupancy

Complex, interactive ecological constraints regulate species distributions, and understanding these factors is crucial for predicting species persistence. We used occupancy analysis, which corrects for imperfect detection, to test the importance of abiotic and biotic habitat and landscape factors on probability of occupancy by Boreal Chorus Frog ( Pseudacris maculata (Agassiz, 1850)) tadpoles. We hypothesized that hydropattern and predators are primarily important because they affect desiccation and predation risk and can interact in ways difficult to predict. We surveyed 62 wetland sites across an elevational gradient in Colorado, USA, and modeled patterns in P. maculata occupancy. Tadpoles were most frequently present in intermediate-length hydropattern systems with lower desiccation risk and no predatory fish because of occasional drying. Pseudacris maculata occupancy had a strong negative relationship with fish presence, while tadpoles, odonate larvae, and Barred Tiger Salamanders ( Ambystoma mavortium mavortium Baird, 1850) frequently co-occurred. Dry seasonal conditions will likely result in fewer intermediate-length hydropattern ponds available for amphibian breeding. We hypothesize that this will force P. maculata to breed in habitats with fish. As habitats shrink, predators that co-occur with P. maculata are expected to concentrate in the remaining habitat and increase predation risk for developing tadpoles (assuming predators are similarly constricted in their habitat use as amphibians are).

Colorado↗

USGS2004

Simulating the dynamics of linear forests in Great Plains agroecosystems under changing climates

Most forest growth models are not suitable for the highly fragmented, linear (or linearly shaped) forests in the Great Plains agroecosystems (e.g., windbreaks, riparian forest buffers), where such forests are a minor but ecologically important component of the land mosaics. This study used SEEDSCAPE, a recently modified gap model designed for cultivated land mosaics in the Great Plains, to simulate the effects of climate change on the dynamics of such linear forests. We simulated the dynamics of windbreaks with different initial planting species richness and widths (light changes as the selected resulting factor) using current climate data and nested regional circulation models (RegCMs). Results indicated that (i) it took 70-80 simulation years for the linear forests to reach a steady state under both normal (present-day) and warming climates; (ii) warming climates would reduce total aboveground tree biomass and the spatial variation in biomass, but increase dominance in the linear forests, especially in the upland forests; (iii) linear forests with higher planting species richness and smaller width produced higher aboveground tree biomass per unit area; and (iv) the same species performed very differently with different climate scenarios, initial planting diversity, and forest widths. Although the model still needs further improvements (e.g., the effects of understory species should be included), the model can serve as a useful tool in modeling the succession of linear forests in human-dominated land mosaics under changing climates and may also have significant practical implications in other systems. ?? 2004 NRC Canada.

Canadian Journal of Forest Research↗

USGS2020

Odds ratios and hurdle models: a long-term analysis of parasite infection patterns in endangered young-of-the-year suckers from Upper Klamath Lake, Oregon, USA

We used odds ratios and a hurdle model to analyze parasite co-infections over 25 years on >20,000 young-of-the year of endangered Shortnose and Lost River Suckers. Host ecologies differed as did parasite infections. Shortnose Suckers were more likely to be caught inshore and 3–5 times more likely to have Bolbophorus spp. and Contracaecum sp. infections, and Lost River Suckers were more likely to be caught offshore and approximately three times more likely to have Lernaea cyprinacea infections. An observed peak shift seems likely to be due to a lower host size limit for Bolbophorus spp. (13.6 mm) compared with L. cyprinacea (23.4 mm). The large data set allowed us to generate strong hypotheses: (i) that a major marsh restoration project had unintended consequences that resulted in an increase in infections; (ii) that co-infection with Bolbophorus spp. increased the odds of infection by L. cyprinacea and Contracaecum sp.; (iii) that significant declines in the odds of infection over approximately 25 days were due to parasite-induced host mortality; (iv) that the fish’s small size relative to L. cyprinacea and Contracaecum sp. might be directly lethal; (v) that the absence of L. cyprinacea infections in the early 1990s was associated with good year-class production of the suckers; and (vi) that parasites might increase the odds of vagrancy from the nursery ground.

Oregon↗

USGS2026

Fluvially-sourced sediment supply and climate modulate morphodynamics and state transitions in bistable aeolian dunefields

Alternative stable state theory in aeolian geomorphology describes the occurrence of bare and vegetated aeolian dunes in response to long-term climatic and ecological drivers. Transitions between states, as well as their co-occurrence (bistability), can arise from perturbations to drivers, disturbance, and associated biophysical feedbacks. Here, we examine the role of upwind fluvial sediment disturbance as a driver of aeolian state transitions. We analyze 24 source-bordering aeolian dunefields along 400 km of the Colorado River in Grand Canyon, USA, where active and inactive aeolian dune states occur downwind of fluvial sediment sources. Four decades of topographic change detection following upstream dam emplacement revealed that active aeolian dunes—which had indicators of recent aeolian transport—experienced four times more surface change than inactive dunes lacking such indicators of recent aeolian transport. Persistent aeolian activity occurred where bare upwind fluvial sandbars were maintained as sediment sources, whereas transitions toward inactivity accompanied the loss of bare sandbars and resulted in 50% less topographic change. Contrary to theory, the transition to aeolian inactivity did not correspond to significant reductions in erosion, despite decreased topographic changes. These results broadly demonstrate the effects of biophysical feedbacks within fluvially sourced aeolian environments. Specifically, they show that reductions in aeolian activity are not synonymous with geomorphic quiescence, as other sedimentary processes may become dominant agents of change within these coupled sedimentary systems that are ubiquitous throughout dryland regions on Earth.

Arizona↗

USGS2007

Occurrence and food habits of the round goby in the profundal zone of southwestern Lake Ontario

Little is known about the ecology of round goby (Neogobius melanostomus), an invasive benthic fish, in the profundal zone of the Great Lakes. In April 2002–2005 we caught increasing numbers of round gobies with a bottom trawl in the 45–150 m depth range of southwestern Lake Ontario. In 2005, we examined gut contents of 30 round gobies from each of three depths, 55, 95, and 130 m, and qualitatively compared gut contents with density of benthic invertebrates determined by Ponar grabs. Round goby guts contained mostly Dreissena spp. and opposum shrimp, Mysis relicta ( Mysis ); the frequency of occurrence of dreissenids in guts decreased with depth, whereas the frequency of occurrence of Mysis in guts increased with depth. Abundance of these invertebrates in the environment followed the same pattern, although dreissenids of optimum edible size (3–12 mm) were still abundant (1,373/m 2 ) at 130 m, where round gobies primarily consumed Mysis , suggesting that round gobies may switch from dreissenids to more profitable prey when it is available. Other food items were ostracods and fish, with ostracods generally eaten by smaller round gobies and fish eaten by larger round gobies. Occurrence and increasing abundance of round gobies in the profundal zone and predation on Mysis by round goby could have far-reaching consequences for the Lake Ontario fish community.

Journal of Great Lakes Research↗

USGS2010

Ecological factors influencing nest survival of greater sage-grouse in Mono County, California

We studied nest survival of greater sage-grouse ( Centrocercus urophasianus ) in 5 subareas of Mono County, California, USA, from 2003 to 2005 to 1) evaluate the importance of key vegetation variables for nest success, and 2) to compare nest success in this population with other greater sage-grouse populations. We captured and radiotracked females ( n = 72) to identify nest sites and monitor nest survival. We measured vegetation at nest sites and within a 10-m radius around each nest to evaluate possible vegetation factors influencing nest survival. We estimated daily nest survival and the effect of explanatory variables on daily nest survival using nest-survival models in Program MARK. We assessed effects on daily nest survival of total, sagebrush ( Artemisia spp.), and nonsagebrush live shrub-cover, Robel visual obstruction, the mean of grass residual height and grass residual cover measurements within 10 m of the nest shrub, and area of the shrub, shrub height, and shrub type at the nest site itself. Assuming a 38-day exposure period, we estimated nest survival at 43.4%, with percent cover of shrubs other than sagebrush as the variable most related to nest survival. Nest survival increased with increasing cover of shrubs other than sagebrush. Also, daily nest survival decreased with nest age, and there was considerable variation in nest survival among the 5 subareas. Our results indicate that greater shrub cover and a diversity of shrub species within sagebrush habitats may be more important to sage-grouse nest success in Mono County than has been reported elsewhere.

California↗

USGS2019

Factors affecting prey availability and habitat usage of nonbreeding piping plovers (Charadrius melodus) in coastal Louisiana

The Gulf of Mexico is home to a large proportion of the wintering population of the threatened piping plover ( Charadrius melodus ), but little is known about the bird's ecology in this region. In Louisiana, the majority of nonbreeding piping plovers are found on the state's rapidly eroding barrier islands. Between August 2013 and May 2014, surveys were conducted to assess the abundance and habitat use of piping plovers, as well as to characterize their invertebrate prey base, on Whiskey and Trinity islands. Seventy-eight percent of piping plovers observed were foraging, 18% roosting, and 4% engaged in other ambulatory activities. Intertidal habitat, such as foreshore beach and tidal flats, was used by 87% of foraging and 96% of roosting piping plovers. Though available, backshore beach, interior sand flats, and dunes were rarely used. The invertebrate community was dominated by haustoriid amphipods (87.5% of individuals collected), followed by bivalves (9.3%) and polychaetes (2.7%). Seasonal patterns and between-island differences were observed in all three invertebrate taxa, but these effects differed between beach habitat and the gulfside and bayside of prominent sand spits. Moisture had a positive effect on amphipod abundance and polychaete presence. There was no association between invertebrate and plover abundance, and prey abundance did not differ between sample sites where piping plovers were observed foraging and random sites. The low abundances of birds and prey, coupled with high variation among samples, are challenges for establishing baseline datasets to evaluate the consequences of coastal restoration activities.

Louisiana↗

USGS2021

Environmental conditions associated with occurrences of the threatened Yaqui Catfish in the Yaqui River Basin, Mexico

The Yaqui Catfish Ictalurus pricei is an understudied species, with limited information available on its ecology, distribution, and local habitat use. Native to the southwestern United States and northwestern Mexico, Yaqui Catfish populations are declining, which has prompted listing of the species as threatened in the United States and as a species of concern in Mexico. Water overallocation, habitat degradation, invasive species introductions, and hybridization with nonnative Channel Catfish I . punctatus have caused the populations in Mexico to decline. The United States population collapsed after years of low recruitment. To better focus conservation efforts as well as define habitat associated with Yaqui Catfish occurrences, we assessed the distribution in the Yaqui River basin of Mexico by using historical data at a landscape scale. Yaqui Catfish were historically found across the watershed among a diversity of environments but were most frequently associated with small, intermittent streams. Basin land cover was dominated by forest, shrubland, and grassland, and Yaqui Catfish generally occurred in stream segments at similar proportions. However, a small number of Yaqui Catfish occurrences were associated with urban and cropland land cover types in proportions greater than the availability of those categories on the landscape. With the species facing declines in the region, this work will help to inform future conservation efforts aimed at securing the Yaqui Catfish, protecting suitable habitat, and better defining its current status in Mexico.

Yaqui River Basin↗

USGS2016

Tracking domestic ducks: A novel approach for documenting poultry market chains in the context of avian influenza transmission

Agro-ecological conditions associated with the spread and persistence of highly pathogenic avian influenza (HPAI) are not well understood, but the trade of live poultry is suspected to be a major pathway. Although market chains of live bird trade have been studied through indirect means including interviews and questionnaires, direct methods have not been used to identify movements of individual poultry. To bridge the knowledge gap on quantitative movement and transportation of poultry, we introduced a novel approach for applying telemetry to document domestic duck movements from source farms at Poyang Lake, China. We deployed recently developed transmitters that record Global Positioning System (GPS) locations and send them through the Groupe Spécial Mobile (GSM) cellular telephone system. For the first time, we were able to track individually marked ducks from 3 to 396 km from their origin to other farms, distribution facilities, or live bird markets. Our proof of concept test showed that the use of GPS-GSM transmitters may provide direct, quantitative information to document the movement of poultry and reveal their market chains. Our findings provide an initial indication of the complexity of source-market network connectivity and highlight the great potential for future telemetry studies in poultry network analyses.

Poyang Lake↗

USGS2020

Latitudinal patterns of alien plant invasions

Latitudinal patterns of biodiversity have long been a central topic in ecology and evolutionary biology. However, while most previous studies have focused on native species, little effort has been devoted to latitudinal patterns of plant invasions (with a few exceptions based on data from sparse locations). Using the most up‐to‐date worldwide native and alien plant distribution data from 801 regions (including islands), we compared invasion levels (i.e. alien richness/total richness) in the Northern and Southern Hemispheres and across continental regions and islands around the globe. Results from quantile regressions using B‐splines to model nonlinearity showed (1) declining richness with increasing latitude, although the highest alien richness occurs at around 40 degrees in both hemispheres, (2) decreasing invasion levels towards higher latitudes on islands but a unimodal pattern in invasion level in continental regions in each hemisphere, (3) significantly higher invasion levels on islands than in continental regions and (4) a greater variability in invasion levels on islands at low latitudes than on high‐latitude islands. In continental regions, only the mid‐latitudes had high variability with both low and high invasion levels. Our findings identified latitudes with invasion hotspots where management is urgently needed, and latitudes with many areas of low invasions but high conservation potential where prevention of future invasions should be the priority.

Journal of Biogeography↗