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At least 1,549 records · Page 86Linked to original sources

USGS2007

An evaluation of selenium concentrations in water, sediment, invertebrates, and fish from the Solomon River Basin

The Solomon River Basin is located in north-central Kansas in an area underlain by marine geologic shales. Selenium is an indigenous constituent of these shales and is readily leached into the surrounding groundwater. Portions of the Basin are irrigated primarily through the pumping of selenium-contaminated groundwater from wells onto fields in agricultural production. Water, sediment, macroinvertebrates, and fish were collected from various sites in the Basin in 1998 and analyzed for selenium. Selenium concentrations were analyzed spatially and temporally and compared to reported selenium toxic effect thresholds for specific ecosystem components: water, sediments, food-chain organisms, and wholebody fish. A selenium aquatic hazard assessment for the Basin was determined based on protocol established by Lemly. Throughout the Basin, water, macroinvertebrate, and whole fish samples exceeded levels suspected of causing reproductive impairment in fish. Population structures of several fish species implied that successful reproduction was occurring; however, the influence of immigration of fish from low-selenium habitats could not be discounted. Site-specific fish reproduction studies are needed to determine the true impact of selenium on fishery resources in the Basin. ?? Springer Science+Business Media B.V. 2007.

Environmental Monitoring and Assessment↗

USGS2025

Spatiotemporal drivers of water quality and phytoplankton communities in a cyanobacteria-dominated reservoir provide management insights

Reservoirs serve critical roles providing drinking water, irrigation, flood control, hydropower, recreation, fisheries, and aquatic habitat. Yet their physical position, complex shape, and large watersheds make reservoirs especially susceptible to eutrophication and harmful algal bloom (HAB) production. Boysen Reservoir, WY, is a high priority for proactive nutrient management because it is an important source for drinking water and recreation, and has a history of toxic cyanobacterial blooms. We combined four years of comprehensive monitoring efforts by state and federal agencies to characterize the spatiotemporal patterns of nutrient inflow, internal water quality dynamics, and phytoplankton community shifts in Boysen Reservoir. We found nutrient inflow was hydrologically driven, with snowmelt runoff transporting high nutrient loads. Our findings suggest physicochemical and nutrient conditions of the reservoir were strongly different between the furthest reaches of the reservoir, but less variable among the intermediate sites. Space did not play a role in phytoplankton community dynamics, but time was an important factor. Cyanobacteria dominated phytoplankton communities by mid-summer across the reservoir and were driven mainly by temporal physicochemical conditions, like stratification and water temperature. The two most dominant phytoplankton taxa across the four years of sampling were N-fixing, toxin producing cyanobacteria. Extensive monitoring efforts and data analyses can illuminate strategies to safeguard water resources via understanding the drivers of water quality changes and HAB production.

Wyoming↗

USGS2012

Reevaluation of a walleye (Sander vitreus) bioenergetics model

Walleye (Sander vitreus) is an important sport fish throughout much of North America, and walleye populations support valuable commercial fisheries in certain lakes as well. Using a corrected algorithm for balancing the energy budget, we reevaluated the performance of the Wisconsin bioenergetics model for walleye in the laboratory. Walleyes were fed rainbow smelt (Osmerus mordax) in four laboratory tanks each day during a 126-day experiment. Feeding rates ranged from 1.4 to 1.7 % of walleye body weight per day. Based on a statistical comparison of bioenergetics model predictions of monthly consumption with observed monthly consumption, we concluded that the bioenergetics model estimated food consumption by walleye without any significant bias. Similarly, based on a statistical comparison of bioenergetics model predictions of weight at the end of the monthly test period with observed weight, we concluded that the bioenergetics model predicted walleye growth without any detectable bias. In addition, the bioenergetics model predictions of cumulative consumption over the 126-day experiment differed fromobserved cumulative consumption by less than 10 %. Although additional laboratory and field testing will be needed to fully evaluate model performance, based on our laboratory results, the Wisconsin bioenergetics model for walleye appears to be providing unbiased predictions of food consumption.

Fish Physiology and Biochemistry↗

USGS2007

Effects of antenna length and material on output power and detection of miniature radio transmitters

The optimal antenna of transmitters used in small aquatic animals is often a compromise between efficient radio wave propagation and effects on animal behavior. Radio transmission efficiency generally increases with diameter and length of the conductor, but increased antenna length or weight can adversely affect animal behavior. We evaluated the effects of changing antenna length and material on the subsequent tag output power, reception, and detection of tagged fish. In a laboratory, we compared the relative signal strengths in water of 150 MHz transmitters over a range of antenna lengths (from 6 to 30 cm) and materials (one weighing about half of the other). The peak relative signal strengths were at 20 and 22 cm, which are approximately one wavelength underwater at the test frequency. The peak relative signal strengths at these lengths were approximately 50% greater than those of 30 cm antennas, a length commonly used in fisheries research. Few significant differences were present in distances for the operator to hear or the telemetry receiver to decode transmitters from a boat-mounted receiving system based on antenna length, but the percent of tagged fish detected passing a hydroelectric dam fitted with an array of receiving systems was significantly greater at the antenna length with peak output power in laboratory tests. This study indicates careful choice of antenna length and material of small transmitters can be used to reduce weight and possible antenna effects on animal behavior, to maximize tag output power and detection, or to balance these factors based on the needs of the application. ?? 2007 Springer Science+Business Media B.V.

Conference Paper↗

USGS2019

Influences of Lake Trout (Salvelinus namaycush) and Mysis diluviana on Kokanee (Oncorhynchus nerka) in Lake Pend Oreille, Idaho

Research on Lake Pend Oreille, Idaho, has focused on the influence of two potential limiting factors for kokanee Oncorhynchus nerka (Walbaum, 1792): competition for food with Mysis diluviana (Loven, 1862, hereafter Mysis ) and predation by lake trout Salvelinus namaycush (Walbaum, 1792). Population fluctuations of Mysis and lake trout have resulted in substantial heterogeneity in food web conditions, apparently altering both bottom-up and top-down dynamics. Therefore, relative importance of predation and competition were evaluated as drivers of kokanee abundance, biomass, and production. A series of general linear models was used to evaluate relative influences of Mysis and lake trout on kokanee. Kokanee production was a density-dependent process and the collapse of Mysis corresponded to an increase in the modeled maximum annual production of kokanee from 224 tonnes to 408 tonnes. Lake trout also negatively influenced kokanee biomass. A Mysis -mediated, predator-induced kokanee biomass collapse occurred when lake trout and Mysis abundances were both high. Sustainable management of this fishery requires recognition that competition with Mysis will define the scope of kokanee production and therefore the scope of sustainable predation.

Idaho↗

USGS2023

Invasive Brook Stickleback Culaea inconstans occurrence, habitat drivers, and spatial overlap with native fishes in Wyoming, USA

A central focus of modern fisheries management is eradicating invaders that threaten imperiled native fishes. However, vast landscapes and limited funding and personnel resources demand a prioritized approach to management. Brook Stickleback Culaea inconstans (Kirtland, 1840) is an aquatic invasive species in Wyoming, USA, that may pose a risk to native biodiversity. Our aim was to evaluate Brook Stickleback’s invasive potential in the North Platte River drainage. We updated the current distribution of Brook Stickleback, evaluated for possible range expansion, and determined landscape-level habitat drivers and occurrence potential for streams across the North Platte River drainage. Additionally, we examined Brook Stickleback’s spatial overlap with native nongame fishes. At the landscape scale, Brook Stickleback preferred low-gradient streams with moderate disturbance risk. Though we did not find evidence of current Brook Stickleback range expansion 61% of streams in the drainage have landscape-level environmental characteristics that are likely suitable for Brook Stickleback, creating potential for future expansion. Brook Stickleback overlapped spatially with 13 native nongame species, though spatial overlap was less common than expected for species with similar habitat preferences. Our work serves as a case study of the factors to consider when assessing a species’ invasive potential in a previously unstudied region.

Wyoming↗

USGS2024

Supporting climate adaptation for rural Mekong River Basin communities in Thailand

Climate change impacts on large river basins, such as the Mekong River Basin (MRB), are complex due to shared governance and interconnected socioeconomic areas, making them highly vulnerable to change. The MRB, spanning six countries including Thailand, is crucial for the food and economic security of > 60 million people. However, in 2021, Thailand was ranked as the 9th highest risk country affected by climate change. To integrate climate adaptation in Thailand's MRB, we examined the effects of climate change on rapidly developing farmer and fisher communities in northeastern Thailand and explored feasible adaptation options. Using an interdisciplinary approach that included literature review, participatory action methods, and the resist-accept-direct (RAD) framework, we found that climate change is projected to increase temperatures, precipitation, extreme events, erosion, and water clarity, while decreasing heavy sediment transport. These changes negatively impact agriculture, fisheries, human health, and tourism. We identified several adaptation strategies across environmental, ecological, and human health categories to accommodate local needs, such as preventing habitat degradation (e.g., from dams and deforestation), providing fish refuge and passage, and supporting technical capacity. Community-driven adaptation planning and implementation are essential for supporting global sustainable development in a changing climate.

Mitigation and Adaptation Strategies for Global Ch↗

USGS2011

CDFISH: an individual-based, spatially-explicit, landscape genetics simulator for aquatic species in complex riverscapes

We introduce Cost Distance FISHeries (CDFISH), a simulator of population genetics and connectivity in complex riverscapes for a wide range of environmental scenarios of aquatic organisms. The spatially-explicit program implements individual-based genetic modeling with Mendelian inheritance and k -allele mutation on a riverscape with resistance to movement. The program simulates individuals in subpopulations through time employing user-defined functions of individual migration, reproduction, mortality, and dispersal through straying on a continuous resistance surface.

Conservation Genetics Resources↗

USGS2015

Development of twelve microsatellite loci in the red tree corals Primnoa resedaeformis and Primnoa pacifica

A suite of tetra-, penta-, and hexa-nucleotide microsatellite loci were developed from Roche 454 pyrosequencing data for the cold-water octocorals Primnoa resedaeformis and P . pacifica . Twelve of 98 primer sets tested consistently amplified in 30 P . resedaeformis samples from Baltimore Canyon (western North Atlantic Ocean) and in 24 P . pacifica samples (Shutter Ridge, eastern Gulf of Alaska). The loci displayed moderate levels of allelic diversity (average 7.5 alleles/locus) and heterozygosity (average 47 %). Levels of genetic diversity were sufficient to produce unique multi-locus genotypes and to distinguish species. These common species are long-lived (hundreds of years) and provide essential fish habitat ( P . pacifica ), yet populations are provided little protection from human activities. These loci will be used to determine regional patterns of population connectivity to inform effective marine spatial planning and ecosystem-based fisheries management.

Conservation Genetics Resources↗

USGS2015

Nine microsatellite loci developed from the octocoral, Paragorgia arborea

Paragorgia arborea, or bubblegum coral, occurs in continental slope habitats worldwide, which are increasingly threatened by human activities such as energy development and fisheries practices. From 101 putative loci screened, nine microsatellite markers were developed from samples taken from Baltimore canyon in the western North Atlantic Ocean. The number of alleles ranged from two to thirteen per locus and each displayed equilibrium. These nuclear resources will help further research on population connectivity in threatened coral species where mitochondrial markers are known to lack fine-scale genetic diversity.

Baltimore Canyon↗

USGS2017

Novel RAD sequence data reveal a lack of genomic divergence between dietary ecotypes in a landlocked salmonid population

Preservation of heritable ecological diversity within species and populations is a key challenge for managing natural resources and wild populations. Salmonid fish are iconic and socio-economically important species for commercial, aquaculture, and recreational fisheries across the globe. Many salmonids are known to exhibit ecological divergence within species, including distinct feeding ecotypes within the same lakes. Here we used 5559 SNPs, derived from RAD sequencing, to perform population genetic comparisons between two dietary ecotypes of sockeye salmon ( Oncorhynchus nerka ) in Jo-Jo Lake, Alaska (USA). We tested the standing hypothesis that these two ecotypes are currently diverging as a result of adaptation to distinct dietary niches; results support earlier conclusions of a single panmictic population. The RAD sequence data revealed 40 new SNPs not previously detected in the species, and our sequence data can be used in future studies of ecotypic diversity in salmonid species.

Alaska↗

USGS2020

A conservation-oriented SNP panel for Smallmouth Bass (Micropterus dolomieu), with emphasis on Interior Highlands lineages

The Smallmouth Bass ( Micropterus dolomieu ; SMB) is a widely distributed black bass species, but the southwestern edge of the species range within the Interior Highlands contains some of the most divergent ecotypes. The Neosho subspecies ( M. d. velox ) inhabits tributaries of the Arkansas River within the Ozark Mountains and a second lineage is reported from drainages of the Ouachita Mountains. We sought to develop a single nucleotide polymorphism (SNP) panel to (1) diagnose hybridization with sympatric Spotted Bass ( Micropterus punctulatus ; SPB) and non-native Northern SMB ( M. d. dolomieu ) stocked in the region, and (2) delineate population structure within the ranges of the Neosho and Ouachita SMB lineages. We obtained 76 individual SMB samples from across their range but concentrated within the Interior Highlands ( n = 50). We also included 3 SPB to allow for hybrid detection and 3 Shoal Bass ( Micropterus cataractae ) as an outgroup. Phylogenetic trees constructed with the generated SNP data corroborated the existence of at least three major lineages of SMB (Northern, Neosho, and Ouachita), each containing varying degrees of differentiation among major drainages. Simulation analyses revealed that chosen SNPs had high power (> 0.9) to assign SMB × SPB hybrid categories and similarly high power (> 0.8) for Northern SMB × Interior Highlands SMB hybrids. Clustering methods delineated major inter-basin population structure within the native ranges of Neosho and Ouachita SMB with chosen SNPs. Anticipated uses of the resulting 192-loci SNP panel include conservation planning, fisheries management assessments, and ecological investigations of the Neosho and Ouachita SMB lineages.

Arkansas, Missouri, Oklahoma↗

USGS2023

An amplicon genotyping panel suitable for species identification and population genetics in sauger (Sander canadensis) and walleye (Sander vitreus)

Sauger ( Sander canadensis ) and walleye ( Sander vitreus ) are closely related North American fish species that are often managed by fishery agencies throughout their ranges. However, genotyping resources for sauger are presently limited to a small set of microsatellite loci. We evaluated whether primers in an existing walleye genotyping-in-thousands panel could amplify single nucleotide polymorphism loci (SNPs) in sauger. We identified 71 primer pairs that amplify 118 SNPs in both species. Allele frequency differences were large enough to confidently distinguish the species and identify hybrids. Additionally, we identified 41 loci with observed heterozygosity > 0.1 in sauger; these markers may be useful for simple population genetic analyses and parentage analysis when few contributors are present and for differentiating highly structured populations.

Minnesota, Wisconsin↗

USGS2010

Spring distribution in Winona County, Minnesota, USA and the relationship with geologic strata in a karst landscape

Karst aquifers are important groundwater resources, but are vulnerable to contamination due to relatively rapid subsurface transport. Springs, points where the landscape and water table intersect and cold groundwater discharges, link aquifer systems with land surfaces and water bodies. As such, in many regions, they are critical to the viability of lakes, streams and cold-water fish communities. An understanding of where springs are located is important to watershed, fishery and environmental management efforts in karst regions. To better understand spatial distribution of springs and as a potential method for identifying variables that characterize locations of springs for improved land and watershed management, a nearest-neighbor analysis and a discriminant function analysis (DFA) of springs were conducted in Winona County, Minnesota, USA, a karst landscape. Nearest-neighbor analysis examined the spatial spring distribution. Twenty-two variables describing the locations of springs were analyzed to ascertain their ability to discriminate correct aquifer unit or bedrock unit classification for each spring. Springs were clumped with the highest densities in the lowest elevations. Springs were correctly assigned to aquifer units and bedrock units with eight and 11 landscape variables, respectively. Forest land cover was the only land cover type contributing to spring discrimination. Consideration of upland human activities, particularly in forested areas, on spring discharge along with a better understanding of characteristics describing spring locations could lead to better management activities that locate and protect springs and their important contributions to regional ecohydrology.

Minnesota↗

USGS1988

Distribution, status, and traditional significance of the West Indian manatee Trichechus manatus in Venezuela

Aerial and interview surveys were conducted in 1986 to determine the current distribution, status, and traditional significance of the West Indian manatee Trichechus manatus in Venezuela. Aerial surveys provided just eight tentative sightings in 73 hours of searching. These discouraging results may have been due to poor visibility, small populations, and perhaps reduced dry season manatee activity. Results of interview surveys, however, permitted a number of important generalizations. A remnant manatee population exists in Lake Maracaibo, but none occur along the more than 1500 km of Caribbean coastline. Abundance is greatest in eastern Venezuela bordering the Golfo de Paria, in the Orinoco Delta, and in the middle Orinoco and tributaries. Local market hunting in the middle of this century probably greatly reduced manatee populations in these areas. Recent protection laws, education efforts, and manatee scarcity have resulted in a declining interest in manatee hunting. Much excellent manatee habitat persists in these regions, and a continued decline in hunting could result in an optimistic outlook for future manatee populations if the incidental take in net fisheries is controlled. Traditional beliefs and legends concerning manatees in Venezuela, including hunting taboos, show that these animals remain a colorful part of the folk culture. However, manatee protection does not pose economic hardships or infringe upon traditional spiritual beliefs.

Biological Conservation↗

USGS1984

Effects of twenty-five compounds on four species of aquatic fungi (Saprolegniales) pathogenic to fish

Four species of aquatic fungi ( Achlya flagellata, A. racemosa, Saprolegnia hypogyna , and S. megasperma ) were exposed to 25 chemicals representing seven classes of compounds for 15 and 60 min, in an effort to identify potential fungicidal agents for use in fish culture. The antifungal activity of each chemical was compared with that of malachite green, a reference compound with known fungicidal properties but not registered for fishery use. Six compounds which inhibited fungal growth on artificial media at concentrations of < 100 mg/l (listed in order of decreasing antifungal activity) were the cationics Du-ter ® and copper oxychloride sulfate, the amine Lesan ® , the amide BAS-389-O1F and the cationics Cuprimyxin ® and Roccal ® II. Certain chemicals from these classes of compounds may have promise as aquatic fungicides.

Aquaculture↗

USGS1994

Detection of Aeromonas salmonicida from water using a filtration method

Aeromonas salmonicida is a principal pathogen that contributes to mortality in hatchery-maintained Atlantic salmon that originated from the Connecticut and Merrimack rivers in the northeastern United States. Field tests were conducted to assess a filtration method for detection of A. salmonicida in water used to rear fishes. A presumptive identification of typical A. salmonicida was available within 72 h and the pathogen was confirmed within 96 h. This filtration method has been incorporated into daily management practices and provides results that allowed managers to make more informed decisions for fishery resources.

Aquaculture↗

USGS1989

Impacts of exploratory drilling for oil and gas on the benthic environment of Georges Bank

A 3-year monitoring program was performed to assess the impacts of exploratory drilling for oil and gas on the benthic environment of Georges Bank, an important commercial fishery region in the North Atlantic east of Massachusetts, USA. Surficial sediments were sampled for chemical and benthic infaunal analysis and bottom still photographs were taken to document bottom microtopography and epifauna at 46 stations during 12 field surveys. The surveys were performed quarterly from just before drilling began, during drilling, and for nearly 2 years after completion of drilling. Two of the eight drilling sites were selected for monitoring. Twenty-nine stations were positioned in a tight radial array around a drilling site in 80 m of water. A second group of three stations was positioned near another drilling site in 140 m of water. The remaining stations covered a broad expanse of the Bank and adjacent suspected sites of deposition of fine-grained sediments.\ Of the 12 elements analyzed in bulk sediments, only barium increased in concentration during the period when drilling was taking place (July 1981 to September 1982). The concentration of barium in surficial sediment increased 4·7-fold from 28 ppm before drilling to 131·7 ppm after drilling at the station closest to the drilling site in 80 m of water and 5·9-fold from 32 ppm before drilling to 172 ppm after drilling at the station closest to the drilling site in 140 m of water. The concentrations of both barium and chromium increased in the fine (silt/clay) fraction (usually less than 5% by weight of sediment from most stations) of sediments from several stations around one or both rig sites monitored during the period of drilling. Elevated concentrations of chromium (about two-fold) occurred only in sediments near the drilling site in 140 m of water. Statistically significant increases in the concentration of barium in the fine fraction to sediment were detected approximately 65 km west (downcurrent) and 35 km east of the drilling site in 80 m of water after drilling was completed. The benthic fauna were abundant and diverse throughout the study area. At most stations, the dominant species remained nearly the same from one season to another over the 3 years of sampling. Polychaetes were the most abundant, followed by crustaceans. The number of individuals of some species, particularly the amphipods Erichthonius fasciatus and Unciola inermis , showed large seasonal variations. Cluster analysis revealed a strong relationship between community structure and both sediment type and water depth. Little seasonal variation was detected, but some interannual differences were revealed by cluster analysis and correspondence analysis. The replicates from a station always resembled each other more than they resembled any replicates from other stations. In addition, the combined replicates from a station always clustered with samples from that station taken on other cruises. This excellent replication and uniformity of the benthic infaunal community at a station over time made it possible to detect very subtle changes in community parameters that might be related to discharges of drilling fluid and drill cuttings. Nevertheless, no changes were detected in benthic communities of Georges Bank that could be attributed to drilling activities.

Massachusetts↗