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At least 1,531 records · Page 85Linked to original sources
USGS2018

Genetic integrity, population status, and long-term viability of isolated populations of shoal bass in the upper Chattahoochee River basin, Georgia

This report characterizes the status of multiple isolated Shoal Bass ( Micropterus cataractae ) populations in the upper Chattahoochee River basin (UCRB), Georgia. The Shoal Bass, a sport fish endemic to the Apalachicola-Chattahoochee-Flint River (ACF) basin, is a fluvial-specialist species considered vulnerable to local extirpations and extinction due to habitat fragmentation and introgression with non-native congeners. Perhaps one of the most isolated populations of Shoal Bass exists in a 2-km reach of Big Creek, a tributary of the Chattahoochee River located near Roswell, Georgia. Big Creek is partially contained within the Chattahoochee River National Recreation Area, although the Big Creek watershed is riddled with urban land cover. Roswell Mill Dam limits the upstream extent of the Shoal Bass population at Big Creek, and the downstream extent is presumably limited to the confluence of Big Creek and the Chattahoochee River. This reach of the Chattahoochee River is thermally depressed because of coldwater releases from Lake Lanier, and is considered unsuitable for Shoal Bass. Herein, we examine the genetic integrity, population status, and long-term viability of the Shoal Bass population in Big Creek. We also examine two additional Shoal Bass populations that occur in the UCRB, specifically the Chestatee River and the upper Chattahoochee River, both of which are impounded at Lake Lanier. Together, the Shoal Bass inhabiting these three stream systems comprise a distinct genetic stock of Shoal Bass (Taylor 2017), underscoring the importance of conserving these populations towards maintaining the overall diversity and adaptive potential of the species. We assessed genetic diversity and estimated effective population sizes within these three rivers by genotyping fish with 16 microsatellite DNA markers. Results demonstrated that the Shoal Bass population in Big Creek has experienced high rates of introgression with non-native Smallmouth Bass (M. dolomieu), purportedly introduced into the Chattahoochee River in the past 10-15 years. Alarmingly, only 24% (15 of 62) of putative Shoal Bass collected from Big Creek were genetically pure Shoal Bass, whereas the majority of fish were first-filial (F1) generation hybrids and unidirectional backcrosses towards Shoal Bass. Fleeting opportunity may remain to conserve the native genome of the Shoal Bass population in Big Creek. High hybridization rates prevented genetic diversity analysis for the Big Creek population. Shoal Bass populations in the Chestatee and Chattahoochee rivers displayed levels of genetic diversity similar to populations that persist in other rivers in the ACF basin, namely the Flint and Chipola rivers. Effective population sizes of 93.8– 197.4 for the Chestatee and Chattahoochee rivers (combined) suggest that the conservation status of these populations is stable for the short-term, but may be at risk of losing genetic diversity and adaptive potential in the long-term. To estimate age and mortality of the three populations, we used fish scales and capture-markrecapture (CMR) as complementary, non-lethal methods for age estimation. Estimated ages of phenotypic Shoal Bass ranged from 1-12 years in all three populations, demonstrating increased longevity compared to populations elsewhere within the native range. Catch-curve estimates of annual mortality ranged from 18.4-23.7%, which are markedly lower than those observed in other Shoal Bass populations in the ACF basin. These differences in life-history characteristics underscore the need for the development of population-specific management and conservation strategies for Shoal Bass in the UCRB. The lowest recruitment variability (i.e., the variation in year-class strength) was observed in the Chestatee River, a forested watershed, whereas the highest variability was observed in Big Creek, an urbanized watershed. Recruitment strength in Big Creek was negatively influenced by discharge variability in the summer months, suggesting that flashy, sediment-laden flows hinder survival of recently hatched young. Other statistically significant models from Big Creek and the Chattahoochee River indicated that over-winter survival could be an important pinch-point for recruitment in UCRB populations. A multi-agency sampling effort was conducted from May 2013-May 2016 to estimate the population size of Shoal Bass occupying the 1-km of wadeable shoal habitats in Big Creek. Using CMR models, we estimated that approximately 219-348 Shoal Bass (≥ 70 mm total length) occupied the area throughout the duration of our study. These estimates largely reflect abundance of individuals aged 0-2 years, as only 9% (36 of 408) tagged fish were aged ≥ 7 years. Local abundance appeared similar to that reported for a population that inhabited Little Uchee Creek, a similar-sized tributary of the Chattahoochee River, prior to its recent functional extirpation. The low abundance of large, adult Shoal Bass further suggests the long-term viability of the Big Creek population may be in jeopardy. Perhaps most importantly, CMR estimates reflect abundance of phenotypic Shoal Bass – genetic analyses suggest the abundance of pure Shoal Bass could be an order of magnitude smaller. To evaluate the potential for adult Shoal Bass to emigrate from Big Creek into the mainstem Chattahoochee River, we tagged eight adults with acoustic telemetry tags and assessed their seasonal residency at two stationary receiver locations located in increasing proximity to the confluence with the Chattahoochee River. Fish took up residency near the confluence during the fall and winter months, during which time water temperatures in Big Creek were periodically colder than the Chattahoochee River. Although we were unable to document emigration, we conclude that the potential for emigration is highest during the winter months when the Chattahoochee River may be warmer than Big Creek. Two of the tagged fish were caught by anglers near the confluence, suggesting that angling pressure at Big Creek may be higher than previously suspected. Overall, this study observed unique life-history characteristics and characterized the population status of multiple Shoal Bass populations in the UCRB. Populations in the Chestatee and Chattahoochee rivers appear stable at present and likely represent the last remaining strongholds for pure Shoal Bass in the UCRB. Efforts to preserve forested watershed conditions, natural hydrology, and shoal habitats would contribute to the long-term persistence of Shoal Bass populations in these two rivers. Additionally, the detection of non-native Alabama Bass and their associated hybrids in both rivers is cause for concern. Diligent monitoring of hybridization dynamics between Alabama Bass and Shoal Bass is warranted, along with an assessment of Alabama Bass invasion extent upstream of Lake Lanier. The Shoal Bass population in Big Creek is threatened by elevated levels of introgression with nonnative Smallmouth Bass, recruitment variability, low abundance of adults, and isolation from other populations. Conservation intervention is urgently needed to restore and preserve this genetically distinct population, which would contribute to preservation of range wide genetic diversity and adaptability of the species. Additionally, an urban sport fishery for Shoal Bass at Big Creek has the potential to serve as a tool for increasing public awareness, engagement, and support of Shoal Bass conservation efforts in the UCRB. We suggest strategies for conservation of the remnant shoal habitats and Shoal Bass population in Big Creek, including potential development of a supplemental stocking program, selective removal of non-native congeners, and delivery of environmental education programs that could bolster awareness and appreciation.

Georgia↗
USGS2022

A decade of monitoring micropollutants in urban wet-weather flows: What did we learn?

Urban wet-weather discharges from combined sewer overflows (CSO) and stormwater outlets (SWO) are a potential pathway for micropollutants (trace contaminants) to surface waters, posing a threat to the environment and possible water reuse applications. Despite large efforts to monitor micropollutants in the last decade, the gained information is still limited and scattered. In a metastudy we performed a data-driven analysis of measurements collected at 77 sites (683 events, 297 detected micropollutants) over the last decade to investigate which micropollutants are most relevant in terms of 1) occurrence and 2) potential risk for the aquatic environment, 3) estimate the minimum number of data to be collected in monitoring studies to reliably obtain concentration estimates, and 4) provide recommendations for future monitoring campaigns. We highlight micropollutants to be prioritized due to their high occurrence and critical concentration levels compared to environmental quality standards. These top-listed micropollutants include contaminants from all chemical classes (pesticides, heavy metals, polycyclic aromatic hydrocarbons, personal care products, pharmaceuticals, and industrial and household chemicals). Analysis of over 30,000 event mean concentrations shows a large fraction of measurements (> 50%) were below the limit of quantification, stressing the need for reliable, standard monitoring procedures. High variability was observed among events and sites, with differences between micropollutant classes. The number of events required for a reliable estimate of site mean concentrations (error bandwidth of 1 around the “true" value) depends on the individual micropollutant. The median minimum number of events is 7 for CSO (2 to 31, 80%-interquantile) and 6 for SWO (1 to 25 events, 80%-interquantile). Our analysis indicates the minimum number of sites needed to assess global pollution levels and our data collection and analysis can be used to estimate the required number of sites for an urban catchment. Our data-driven analysis demonstrates how future wet-weather monitoring programs will be more effective if the consequences of high variability inherent in urban wet-weather discharges are considered.

Water Research↗
USGS2007

Improving regional-model estimates of urban-runoff quality using local data

Urban water-quality managers need load estimates of storm-runoff pollutants to design effective remedial programs. Estimates are commonly made using published models calibrated to large regions of the country. This paper presents statistical methods, termed model-adjustment procedures (MAPs), which use a combination of local data and published regional models to improve estimates of urban-runoff quality. Each MAP is a form of regression analysis that uses a local data base as a calibration data set to adjust the regional model, in effect increasing the size of the local data base without additional, expensive data collection. The adjusted regional model can then be used to estimate storm-runoff quality at unmonitored sites and storms in the locality. The four MAPs presented in this study are (1) single-factor regression against the regional model prediction, P u ; (2) least-squares regression against P u ; (3) least-squares regression against P u and additional local variables; and (4) weighted combination of P u and a local-regression prediction. Identification of the statistically most valid method among these four depends upon characteristics of the local data base. A MAP-selection scheme based on statistical analysis of the calibration data set is presented and tested.

Journal of the American Water Resources Associatio↗
USGS1994

Hydrologic data collection at Crowders Creek and Steele Creek, York County, South Carolina, 1991-92

Rapid industrial and urban growth is anticipated in the vicinity of Crowders Creek near Clover, S.C., and Steele Creek near Fort Mill, S.C. These subbasins are in the Catawba River Basin in York County, S.C. To obtain baseline information on these basins prior to urbanization, gaging stations 02145642 (Crowders Creek near Clover, S.C.) and 021467801 (Steele Creek near Fort Mill, S.C.) were established to collect streamflow and water-quality data. Continuous stream-stage and streamflow data were collected during the periods of March 23, 1991 to September 30, 1992, and May 29, 1991 to September 30, 1992, for stations 02145642 and 021467801, respectively. Average streamflows for stations 02145642 and 021467801 for the study period were 80.5 cubic feet per second and 28.6 cubic feet per second, respectively. Water-quality data were collected on four separate occasions at each gage site; two samplings during low-flow events and two samplings during high-flow events. Fecal coliform concentrations exceeded minimum standards for freshwater with other physical and chemical constituents meeting South Carolina Department of Health and Environmental Control standards.

South Carolina↗
USGS2008

Summary and Evaluation of the Quality of Stormwater in Denver, Colorado, October 2001 to October 2005

Stormwater in the Denver area was sampled by the U.S. Geological Survey, in cooperation with the Urban Drainage and Flood Control District, in a network of five monitoring stations - three on the South Platte River and two on tributary streams, beginning in October 2001 and continuing through October 11, 2005. Composite samples of stormwater were analyzed at the U.S. Geological Survey National Water Quality Laboratory during water years 2003-2005 and the Metro Wastewater Reclamation District Laboratory during water year 2002 for water-quality properties such as pH, specific conductance, hardness, and residue on evaporation at 105 degrees Celsius; and for constituents such as major ions (calcium, chloride, fluoride, magnesium, potassium, sodium, and sulfate) in 2005, organic carbon and nutrients, including ammonia, nitrite plus nitrate, ammonia plus organic nitrogen, phosphorus, and orthophosphate; and for metals, including total and dissolved phases of copper, lead, manganese, and zinc. Samples analyzed for bacteriological indicators such as Escherichia coli and fecal coliform collected during selected storms also were analyzed at the Metro Wastewater Reclamation Laboratory. Discrete samples collected during selected storms were analyzed at the U.S. Geological Survey National Water Quality Laboratory for a suite of water-quality properties and constituents similar to those analyzed in the composite samples but that did not include determinations for total phases of metals. Streamflow characteristics associated with 176 composite stormwater samples indicate that most samples were collected from hydrographs classified as falling or event hydrographs and that only a few samples were collected from rising hydrographs. Results from laboratory analyses of the composite samples indicate spatial patterns in which concentrations for some constituents increase with contributing drainage area in the South Platte River and Sand Creek, but no well-defined relation with the amount of urban land cover was identified using data available from the U.S. Geological Survey National Land Cover data. Results from 22 discrete samples collected during two storms and used to obtain composited results with various weighting methods indicate that correlation coefficients between time-weighted and volume-weighted concentrations were generally at least 0.65, indicating a strong direct correlation between the two weighting methods for the stations involved in this study. In addition, the central tendency for relative percent differences between the time- and volume-weighting methods typically has an absolute value of about 10 or less, indicating good agreement for these weighting methods for data collected as part of this study. Comparison of stormwater results to numeric standards for streams developed by the Colorado Department of Public Health and Environment on the basis of use classifications indicates that, for water-quality properties and constituents other than bacteriological indicators, there were very few exceptions to numeric standards. Bacteriological indicators, however, such as Escherichia coli and fecal coliform consistently exceeded numeric standards in all bacteriological samples. An evaluation of laboratory results from composite samples on the basis of annual means indicates the presence of some simple upward and downward temporal trends in concentrations. In general, for annual means of results for all stations, hardness, ammonia plus organic nitrogen, total phosphorus, most dissolved metals (lead, manganese, and zinc), and all total metals (copper, lead, manganese, and zinc) all indicate annual means that decrease each year, or downward trends. Some trends were indicated only at individual stations in the network rather than at all stations. Ammonia as nitrogen at Union, Denver, and Henderson, orthophosphate at Sand Creek, and nitrite plus nitrate at Denver and Henderson all indicate decreasing annual means, or downward tr

Scientific Investigations Report↗
USGS2026

Toxicity of 6PPD alternatives to salmonid cell lines

Stormwater runoff in urban areas introduces numerous anthropogenic chemicals into surrounding aquatic environments. One such chemical is 6PPD ( N -(1,3-Dimethylbutyl)- N ’-phenyl- p- phenylenediamine), the primary antidegradant responsible for protecting tire rubber from ozone-induced degradation and cracking. When exposed to ozone on the road surface 6PPD is transformed into the toxic transformation product 6PPD-quinone (6PPDQ). This compound is highly lethal to coho salmon ( O ncorhynchus kisutch ), and 24 hour 50% lethal concentrations (LC 50 ; 41-95 ng/L) are frequently detected in urban streams during stormwater runoff events 1-5 . The highest stream concentrations of 6PPDQ and most extensive coho salmon mortality occur in high-traffic urban areas, where tire wear particles accumulate due to the frequent braking and acceleration of cars 6 . In the Seattle area, some coho salmon-bearing streams can lose over 90% of returning females prior to spawning due to 6PPDQ-containing runoff 7 . Prespawn loss of this magnitude could result in the extinction of some urban spawning populations 8 . Importantly, the lethal effects of 6PPDQ have been observed in several other salmonid species, indicating that its impact may threaten fish health for urban aquatic environments globally 9-11 . The ubiquity of 6PPD in automobile tires, high toxicity of the transformation product 6PPDQ, and prevalence of 6PPD and 6PPDQ in environmental matrices has spurred investigations into alternative rubber antiozonants to replace 6PPD that retain tire performance while reducing ecological harm. A technical memorandum provided to the legislature by the Washington State Department of Ecology summarized a list of potential 6PPD alternatives requiring further study, including several structurally similar p-phenylenediamines (PPDs) 12 . However, the structural similarity of other PPDs to 6PPD and their known production of quinone transformation products 13 raises concerns that they may elicit similar toxic effects as 6PPDQ. Currently, investigations into the toxicity of proposed PPD alternatives or their ozonated transformation products in coho salmon are limited, representing a significant data gap in evaluating whether they offer improved environmental safety over 6PPD. This project investigated the toxicity of proposed alternative rubber antiozonants in vitro using immortalized cell lines derived from three salmonid species with known differences in sensitivity to 6PPDQ (coho salmon, Chinook salmon ( O. tshawytscha ), rainbow trout ( O. mykiss )) 1 . These immortalized cell lines replicate toxic responses observed in in vivo studies, while enabling higher-throughput testing and reducing the need for animal use and other resource-intensive procedures. The antiozonants and their transformation products selected for testing were chosen based on multiple criteria, including their inclusion in the Ecology technical memorandum, structural substitutions (e.g., branched/cyclic alkyl vs aryl substitutions), commercial availability, and input from the Washington State Department of Ecology and other industry experts.

Report↗
USGS2022

Seasonal and long-term clarity trend assessment of Lake Tahoe, California–Nevada

The clarity of Lake Tahoe, observed using a Secchi disk on a regular basis since the late 1960s, continues to be a sentinel metric of lake health. Water clarity is influenced by physical and biological processes and has declined in the five decades of monitoring, revealing differences between summer (June–September) and winter (December–March). This document summarizes key findings of a study of Lake Tahoe water clarity, including long-term variability and the relative importance of several influencing variables and processes. This study, prepared in cooperation with the Nevada Division of Environmental Protection, focused on (1) an apparent divergence in clarity trends between summer and winter periods, (2) observed changes in in-lake physical and ecological variables that may influence or control seasonal and annual clarity trends, and (3) five research hypotheses regarding lake clarity that were developed by Lake Tahoe management agencies. Previously collected data were used to complete this study. Trend analysis confirmed that winter clarity stabilized (that is, there is no longer a statistically significant trend up or down) during the last 20 years. Evaluation of clarity for selected months in the 50-year Secchi disk clarity dataset showed that only two summer months, July and August, had statistically significant decreases in clarity from 2000–19. Different subsets of available data were analyzed to reveal the presence or absences of trends for each season, decade, and month. Five hypotheses related to lake clarity were part of the study described by this report. Hypothesis 1 stated that clarity is controlled predominantly by the distribution and volumetric density of fine particles in suspension. This hypothesis was studied using available data describing in-lake fine (0–20 micrometers) particles from 2008–19. Water clarity was negatively correlated with in-lake particle abundance, with particles in the 1.0-4.6 μm range having the greatest effect, consistent with light-scattering theory. Estimated abundances of diatoms of the genus Cyclotella also were found to be negatively correlated with clarity. Data limitations precluded a complete investigation of hypothesis 2, which stated that the observed improvements in winter water clarity are a response to decreasing fine suspended-sediment concentrations in the lake resulting from load reductions from upland sources in and near urbanized areas. Data describing fine-sediment loading from urban areas to the lake were only available since 2014, and only once or twice per month. A slight, statistically significant, negative correlation was identified between urban fine-particle loading and monthly lake clarity with a 4-month lag. Particle abundance in monitored streams is highly correlated with simultaneous particle abundance in the lake. Hypothesis 3 stated that changing hydrodynamic conditions in the lake are increasing thermal stability and resistance to mixing. Trend analyses performed on stability index and buoyancy frequency time series computed from long-term observations of lake temperatures support the hypothesis that hydrodynamic conditions have evolved since 1969 to increase the lake’s resistance to mixing. The date of maximum mixing in winter has become progressively earlier in the year. Lake density stratification, defined using the stability index, is commencing earlier in the year and extending a month longer than in the early years of the monitoring program. Hypothesis 4 stated that the trend of decreasing summer clarity is a result of earlier, prolonged, and more intense stratification. Statistically significant correlations were found between summer clarity and (1) date of onset of stratification, (2) duration of stratification, and (3) buoyancy frequency. Hypothesis 5 stated that ecological (food web) interactions are causing changes in the trends of seasonal or annual clarity; data supporting hypothesis 5 were limited to examples from other systems and to intermittent monitoring of Lake Tahoe and Emerald Bay. The resulting narrative assessment was motivated by a 6-year study of Mysis shrimp disappearance and return in Emerald Bay. The available data and a large body of published literature are consistent with the inference that Mysis shrimp-induced food web changes are causing changes in the trends of seasonal or annual clarity. This food-web study focused on the relations between introduced Mysis shrimp, the native cladocerans ( Daphnia and Bosmina ) that were largely eliminated following Mysis introduction, and the effect on fine particles within the lake. The records of Mysis and other zooplankton data for Lake Tahoe are episodic and have large gaps. Consequently, statistical analyses could not be conducted to compare zooplankton data with other variables. The long-term record, however, indicates that the key effect was a change to the phytoplankton assemblage, where larger diatoms disappeared, likely due to Mysis grazing, only to be replaced by Cyclotella that are an order-of-magnitude smaller and have increased the abundance and volumetric density of total fine particles in suspension (biotic and abiotic).

California↗
USGS2023

Prediction of the probability of elevated nitrate concentrations at groundwater depths used for drinking-water supply in the Puget Sound basin, Washington, 2004–19

The Puget Sound basin encompasses the 13,700-square-mile area that drains to the Puget Sound and the adjacent marine waters of Washington State. Well more than 4 million people live within the basin, with numbers continuing to increase, who rely on the basin’s natural resources including groundwater. The Puget Sound Partnership was created by a Washington State statute to implement a science-based recovery of the Puget Sound to help address impacts to these resources. As part of the recovery, the partnership developed the Puget Sound Vital Signs as measures of ecosystem health that guide the assessment of progress toward Puget Sound recovery goals. The Puget Sound Partnership Leadership Council adopted a Drinking Water Vital Sign associated with human health and quality of life, recognizing certain indicators as integral to the sustainability of Puget Sound recovery efforts. One such Vital Sign indicator was the vulnerability of groundwater throughout the aquifers of the Puget Sound basin to elevated nitrate concentrations as defined by the probability of exceeding 2 milligrams/liter (mg/L) at a specific location and well depth. The U.S. Geological Survey (USGS) led the effort to characterize groundwater vulnerability. For this study, groundwater vulnerability refers to a probability with which a contaminant applied at or near the land surface can migrate to the aquifer of interest for a given set of land-use practices. Nitrate concentration data were selected for evaluation because elevated nitrate concentrations are typically caused by anthropogenic activities and have been associated with deleterious impacts on human health. To identify groundwater vulnerability to elevated nitrate concentrations, logistic regression was used to relate anthropogenic (human associated) and natural variables to the occurrence of elevated nitrate concentrations in untreated groundwater from large public water supply system wells found within the Washington State Department of Health Sentry database. Variables that were analyzed included well depth, soil hydraulic conductivity, precipitation, population density, fertilizer application amounts, and land-use types. Statistically significant models that predicted the probabilities of groundwater nitrate concentrations greater than 2 mg/L based on the predictor variables were created for the time periods 2000–04, 2005–09, 2010–14, and 2015–19. For all time periods, well depth and a measure of the abundance of urban and agricultural land over or near the well consistently helped explain the vulnerability of the well to elevated nitrate concentrations defined as a probability of exceeding 2 mg/L of nitrate. Precipitation and (or) soil hydraulic conductivity were also important predictor variables in the models. The models for each time period were used to create maps of groundwater vulnerability at 150- and 300-foot depths throughout the Puget Sound basin. As expected, the most vulnerable locations were associated with shallower well depths and increased agriculture and urban land cover. Across all four time periods, groundwater vulnerability throughout the Puget Sound was low, with probabilities of exceeding 2 mg/L concentrations of nitrate at depths at 150 and 300 feet typically less than 50 percent. Results also found a slight decrease in probabilities of elevated nitrate concentrations throughout the basin over time. More specifically, additional statistical tests found that groundwater with probabilities of less than about 60 percent declined from 2000 to 2019 and represented more than 75 percent of the modeled Puget Sound basin aquifer. Wells with greater than 60 percent probability increased over the same time period but represented only about 25 percent of the aquifer. The maps and statistical analysis presented in the study provide valuable and informative evaluation of the vulnerability of groundwater in the Puget Sound basin to elevated nitrate concentrations. The probability maps do not represent measured nitrate concentrations in groundwater, but rather they present the probability that nitrate concentrations exceed 2 mg/L. The models and predictions from this study are a viable indicator for the Puget Sound Partnership’s Healthy Human Population—Drinking Water Vital Sign. The logistic regression modeling approach presented here benefits water managers by allowing them to assess temporal trends in a range of probabilities, explore vulnerability changes as new regional land cover and anthropogenic data are generated, and distinguish vulnerabilities at different depths within the aquifer.

Washington↗
USGS2021

Connectivity between lentic and lotic freshwater habitats identified as a conservation priority for coho salmon

Juvenile Pacific salmon exhibit diverse habitat use and migration strategies to navigate high environmental variability and predation risk during freshwater residency. Increasingly, urbanization and climate-driven hydrological alterations are affecting the availability and quality of aquatic habitats in salmon catchments. Thus, conservation of freshwater habitat integrity has emerged as an important challenge in supporting salmon life-history diversity as a buffer against continuing ecosystem changes. To inform catchment management for salmon, information on the distribution and movement dynamics of juvenile fish throughout the annual seasonal cycle is needed. A number of studies have assessed the ecology of juvenile coho salmon ( Oncorhynchus kisutch ) during summer and autumn seasons; catchment use by this species throughout the annual cycle is less well characterized, particularly in high-latitude systems. Here, n = 3,792 tagged juvenile coho salmon were tracked throughout two complete annual cycles to assess basin-wide distribution and movement behaviour of this species in a subarctic, ice-bearing catchment. Juvenile coho salmon in the Big Lake basin, Alaska, exhibited multiple habitat use and movement strategies across seasons; however, summer rearing in lotic mainstem environments followed by migration to lentic overwinter habitats was identified as a prominent behaviour, with two-thirds of tracked fish migrating en masse to concentrate in a small subset of upper catchment lakes for the winter. In contrast, the most significant tributary overwintering site (8% of tracked fish) occurred below a culvert and dam, blocking juvenile fish passage to a headwater lake, indicating that these fish may have been restricted from reaching preferred lentic overwinter habitats. These findings emphasize the importance of maintaining aquatic connectivity to lentic habitats as a conservation priority for coho salmon during freshwater residency.

Aquatic Conservation: Marine and Freshwater Ecosys↗
USGS2005

Assessment of seismic risk in Tashkent, Uzbekistan and Bishkek, Kyrgyz Republic

The impact of earthquakes in urban centers prone to disastrous earthquakes necessitates the analysis of associated risk for rational formulation of contingency plans and mitigation strategies. In urban centers the seismic risk is best quantified and portrayed through the preparation of 'Earthquake damage and Loss Scenarios'. The components of such scenarios are the assessment of the hazard, inventories and the vulnerabilities of elements at risk. For the development of earthquake risk scenario in Tashkent-Uzbekistan and Bishkek-Kyrgyzstan an approach based on spectral displacements is utilized. This paper will present the important features of a comprehensive study, highlight the methodology, discuss the results and provide insights to the future developments. ?? 2005 Elsevier Ltd. All rights reserved.

Soil Dynamics and Earthquake Engineering↗
USGS2000

Geohydrology of the shallow aquifers in the Boulder-Longmont area, Colorado

Urban areas commonly rely on ground water for at least part of the municipal water supply, and as population increases, urban areas expand and require larger volumes of water. However, the expansion of an urban area can reduce ground-water availability. This may occur through processes of depletion (withdrawal of most of the available ground water), degradation (chemicals used in the urban area keep into the ground and contaminate the ground water), and preemption (cost or restrictions on pumping ground water from under extensively urbanized areas may he prohibitive). Thus, a vital natural resource needed to support the growth of an urban area and its infrastructure can become less available because of growth itself. The diminished availability of natural resources caused by expansion of urban areas is not unique to water resources. For example, large volumes of aggregate (sand and gravel) are used in concrete and asphalt to build and maintain the infrastructure (buildings, roads, airports, and so forth) of an urban area. Yet, mining of aggregate commonly is preempted by urban expansion; for example, it cannot he mined from under a subdivision. Energy resources such as coal, oil, and natural gas likewise are critical to the growth and existence of an urban area but may become less available as an urban area expands and preempts mining and drilling. In 1996, the U.S. Geological Survey began work on a national initiative designed to provide information on the availability of those natural resources (water, minerals, energy, and biota) that are critical to maintaining the Nation's infrastructure or that may become less available because of urban expansion. The initiative began with a 3-year demonstration project to develop procedures for assessing resources and methods for interpreting and publishing information in digital and traditional paper formats. The Front Range urban corridor of Colorado was chosen as the demonstration area (fig. 1), and the project was titled the Front Range Infrastructure Resources Project (FRIRP). This report and those of Robson (1996), Robson and others (1998), and Robson and others (2000a, 2000b, 2000c) (fig. 1) are the results of FRIRP water resources investigations; reports pertaining to geology, minerals, energy, biota, and cartography of the FRIRP are published separately. The water-resources studies of the FRIRP were undertaken in cooperation with the Colorado Department of Natural Resources, Division of Water Resources, and the Colorado Water Conservation Board.

Hydrologic Atlas↗
USGS2014

Assessment of ethylene dibromide, dibromochloropropane, other volatile organic compounds, radium isotopes, radon, and inorganic compounds in groundwater and spring water from the Crouch Branch and McQueen Branch aquifers near McBee, South Carolina, 2010-2012

Public-supply wells near the rural town of McBee, in southwestern Chesterfield County, South Carolina, have provided potable water to more than 35,000 residents throughout Chesterfield County since the early 1990s. Groundwater samples collected between 2002 and 2008 in the McBee area by South Carolina Department of Health and Environmental Control (DHEC) officials indicated that groundwater from two public-supply wells was characterized by the anthropogenic compounds ethylene dibromide (EDB) and dibromochloropropane (DBCP) at concentrations that exceeded their respective maximum contaminant levels (MCLs) established by the U.S. Environmental Protection Agency’s (EPA) National Primary Drinking Water Regulations (NPDWR). Groundwater samples from all public-supply wells in the McBee area were characterized by the naturally occurring isotopes of radium-226 and radium-228 at concentrations that approached, and in one well exceeded, the MCL for the combined isotopes. The local water utility installed granulated activated carbon filtration units at the two EDB- and DBCP-contaminated wells and has, since 2011, shut down these two wells. Groundwater pumped by the remaining public-supply wells is currently (2014) centrally treated at a water-filtration plant. To assess the occurrence, distribution, and potential sources of the anthropogenic and naturally occurring compounds detected in groundwater in the McBee area, samples of groundwater and spring water were collected from public-supply, domestic-supply, agricultural-supply, and monitoring wells and springs, respectively, between 2010 and 2012 by the U.S. Geological Survey. The water samples were analyzed for concentrations of EDB, DBCP, other volatile organic compounds (VOCs), radium-226 and radium-228, radon, and inorganic compounds. All wells sampled were screened in the shallow Crouch Branch aquifer, the deeper McQueen Branch aquifer, or, for most public-supply wells, both aquifers. In areas where no wells existed or wells could not be installed, passive samplers that adsorb EDB, DBCP, and various VOCs, were installed in the shallow subsurface. A representative groundwater flow pathway to each public supply well and selected other wells was determined by using a calibrated three-dimensional groundwater-flow model of the Atlantic Coastal Plain in Chesterfield County and particle-tracking analysis. The aerial extent of the groundwater flow pathway to public-supply wells was mapped by using chlorofluorocarbon-concentration based, apparent-age dates of the groundwater. The water-quality data collected between 2010 and 2012, in conjunction with groundwater flow pathways and historical aerial photographs of land uses near McBee, indicate an area where EDB-, DBCP-, 1,2-dichloropropane-, 1,3-dichloropropane-, and carbon disulfide-contaminated groundwater exists in the Crouch Branch aquifer in the Cedar Creek Basin and north of McBee and is most likely related to the past use of these compounds between the early 1900s and the 1980s as soil fumigants in predominately agricultural areas north of McBee. The highest EDB concentration detected (18.6 micrograms per liter) during the 3-year study was in a groundwater sample from an agricultural-supply well located north of McBee. Other VOCs, such as dichloromethane and 1,1,2-trichloroethane, also were detected in groundwater samples from this EDB-contaminated agricultural-supply well but are from unknown source(s). The fact that the agricultural area north of McBee is located in a recharge area for the Crouch Branch aquifer most likely facilitated the groundwater contamination in this area. DBCP-contaminated groundwater detected in three public-supply wells south of McBee in the deeper McQueen Branch aquifer appears to be related to past soil fumigation practices that used DBCP in agricultural areas located south of McBee. One of the three DBCP-contaminated public-supply wells also contained EDB, most likely present in groundwater due to the release of leaded gasolines that contained EDB as a fuel additive between the 1940s and 1970s. A gasoline-source of EDB, rather than a soil-fumigation source, is supported by the co-detection in groundwater from the well of 1,2-dichloroethane, a lead scavenger compound also added to leaded gasoline. Groundwater pumped from two public-supply wells located within and to the east of the McBee town limits and one domestic-supply well east of McBee was characterized by the detection of 1,1-dichloroethane, trichloroethylene, 1,1-dichloroethylene, and perchloroethylene. Groundwater flow pathways determined for these wells indicate that the potential source(s) of these compounds detected in one public-supply well and the domestic-supply well may be located within the McBee town limits, and that the potential source(s) of these compounds detected in the public-supply well to the east of McBee may be located in an area north of McBee formerly used for agriculture, but used for industry since at least the 1970s. Radium isotopes (defined in this study as the sum of radium-226 and radium-228 concentrations) and radon were detected in all wells sampled in the McBee area between 2010 and 2012. Wells characterized by radium isotope concentrations in groundwater that exceeded the MCL of 5.0 picocuries per liter were also characterized by specific conductance values greater than 30 microsiemens per centimeter and clustered north of McBee in a predominately agricultural area, and in agricultural and urban areas located within and east of McBee. The elevated specific conductance values measured in groundwater from these wells most likely are due to recharge by water mineralized by fertilizer application in agricultural areas, or due to the recharge by water mineralized by septic-tank drain-field effluent near urban areas. Radon was detected in groundwater from all wells sampled, and radon concentrations in groundwater from three monitoring wells exceeded the proposed MCL of 300 picocuries per liter. Concentrations of uranium in groundwater in the McBee area increased with increased groundwater-sample depth, most likely due to the proximity of the sample-collection location to basement rock that contains uranium-bearing minerals.

South Carolina↗
USGS2000

Organochlorine pesticides and PCBs in stream sediment and aquatic biota—initial results from the National Water-Quality Assessment Program, 1992–1995

One of the goals of the National Water-Quality Assessment (NAWQA) Program of the U.S. Geological Survey is to assess the status and trends in the nation's water quality and to understand the natural and anthropogenic factors that affect water-quality conditions. This report summarizes the occurrence and distribution of 33 organochlorine compounds in fluvial bed sediment and aquatic biota (whole freshwater fish and freshwater bivalves) sampled by NAWQA investigations between 1991 and 1994. These include historically used insecticides (DDT and metabolites, chlordane and its various components, and dieldrin), some currently used pesticides (permethrin and dacthal) and some industrial chemicals and byproducts (PCBs and hexaclorobenzene). Samples were collected at approximately 500 sites in 19 large hydrologic basins throughout the United States. Contaminant levels in bed sediment and aquatic biota are summarized, first on a national basis, and then by land-use classification (for example, urban, cropland, pasture and rangeland, and forest). Nationally, detection frequencies are highest in sediment and biota for the more persistent organochlorine compounds: total DDT, total chlordane, dieldrin, and total PCBs. Organochlorine compounds were detected more frequently in whole fish than in bivalves or bed sediment. Organochlorine pesticide concentrations were relatively high in agricultural regions with histories of high use. The highest organochlorine compound concentrations in both sediment and biota generally were associated with urban areas. Some organochlorine concentrations in sediment exceeded guidelines for the protection of aquatic organisms. A screening-level comparison of measured organochlorine concentrations in whole fish was made with human health guidelines that are applicable to edible fish. This comparison indicates stream sites at which additional sampling of game fish fillets may be warranted, depending on local patterns of fish consumption. A comparison of current national contaminant levels with previous studies of this scope suggests a gradual decrease in organochlorine contaminant levels, at least in fish.

Water-Resources Investigations Report↗
USGS2014

An ecological response model for the Cache la Poudre River through Fort Collins

The Poudre River Ecological Response Model (ERM) is a collaborative effort initiated by the City of Fort Collins and a team of nine river scientists to provide the City with a tool to improve its understanding of the past, present, and likely future conditions of the Cache la Poudre River ecosystem. The overall ecosystem condition is described through the measurement of key ecological indicators such as shape and character of the stream channel and banks, streamside plant communities and floodplain wetlands, aquatic vegetation and insects, and fishes, both coolwater trout and warmwater native species. The 13- mile-long study area of the Poudre River flows through Fort Collins, Colorado, and is located in an ecological transition zone between the upstream, cold-water, steep-gradient system in the Front Range of the Southern Rocky Mountains and the downstream, warm-water, low-gradient reach in the Colorado high plains. The City wanted to better understand the ecological response of the Poudre River ecosystem to potential changes in stream flow and other physical parameters through the conceptual framework of a multivariable integrated model. This goal was met through the use of a probabilistic model based on Bayesian concepts. This construct allowed the integration of a wide range of data and expert opinion (as informed by local data) to predict potential changes to ecosystem conditions under various flow scenarios. Nine flow scenarios representing past, present, and possible future hydrology were developed as the primary model input. Both reach-scale drivers such as stream channel conditions and pollutant loads, as well as ecological conditions, including species composition, interactions, and habitat requirements influenced model-predicted ecosystem outcomes. Model output consisted of probability distributions for eight ecological indicators collectively representing the physical setting, aquatic life, and riparian habitats of the river ecosystem. We are confident in model predictions related to probable trends, relative magnitude of changes and potential ecosystem responses to changing flow conditions, though data availability and the process of converting diverse data types into a common unit (probabilities) limit precision of individual results. Key findings suggest that: The present ecological function of the Poudre River is altered as a result of more than 150 years of human influences that include highly managed flows, urbanization, gravel mining, channelization and urban and industrial encroachment in the floodplain, underscoring the vulnerable and complex character of the Poudre River; A continuation of today’s flow management will lead to ongoing changes in ecosystem condition, and additional water depletions will compromise ecological conditions; High flows play an essential role in maintaining and improving the aquatic and riparian condition of the river; Adequate flows in base-flow periods are critical to desirable water quality, and thriving fish and insect populations; Improvement of native aquatic life is possible if issues related to channel modifications, siltation, invasive species, and base and high flow conditions are managed properly; The present confined river channel and modified flows has reduced the potential for a keystone and iconic species, plains cottonwood, to be self-sustaining in the study area; The streamside corridor retains the potential to support a functioning riparian forest that provides important ecological services if periodic floodplain inundation occurs. Environmental flows that combine stable and adequate flows in base-flow periods with occasional rejuvenating high flows that meet target levels defined in this study are likely improve all biological indicators across the system. ERM test scenarios that include both stable base flows and rejuvenating high flows indicate that substantial improvements in the river ecosystem can be achieved with improved management of flow volumes similar to those observed in the river during the last half century of intensive water development. These results underscore the possibility of improving the river ecosystem through active management while still maintaining the Poudre’s diverse economic benefits and role as a working river. The ERM was designed to represent the multi-dimensional ecological character of the contemporary urban Poudre River. It provides a scientific foundation that can serve as a decision support tool and foster a more informed community discussion about the future of the river as it provides a better understanding of the likely response of the Poudre River ecosystem to environmental flow management and other stewardship activities. In particular, model results can assist managers in developing specific management actions to achieve desirable goals for key indicators of river health.

Colorado↗
USGS2010

Database for the geologic map of the Bend 30- x 60-minute quadrangle, central Oregon

The Bend 30- x 60-minute quadrangle has been the locus of volcanism, faulting, and sedimentation for the past 35 million years. It encompasses parts of the Cascade Range and Blue Mountain geomorphic provinces, stretching from snowclad Quaternary stratovolcanoes on the west to bare rocky hills and sparsely forested juniper plains on the east. The Deschutes River and its large tributaries, the Metolius and Crooked Rivers, drain the area. Topographic relief ranges from 3,157 m (10,358 ft) at the top of South Sister to 590 m (1,940 ft) at the floor of the Deschutes and Crooked Rivers where they exit the area at the north-central edge of the map area. The map encompasses a part of rapidly growing Deschutes County. The city of Bend, which has over 70,000 people living in its urban growth boundary, lies at the south-central edge of the map. Redmond, Sisters, and a few smaller villages lie scattered along the major transportation routes of U.S. Highways 97 and 20. This geologic map depicts the geologic setting as a basis for structural and stratigraphic analysis of the Deschutes basin, a major hydrologic discharge area on the east flank of the Cascade Range. The map also provides a framework for studying potentially active faults of the Sisters fault zone, which trends northwest across the map area from Bend to beyond Sisters. This digital release contains all of the information used to produce the geologic map published as U.S. Geological Survey Geologic Investigations Series I-2683 (Sherrod and others, 2004). The main component of this digital release is a geologic map database prepared using ArcInfo GIS. This release also contains files to view or print the geologic map and accompanying descriptive pamphlet from I-2683.

Oregon↗
USGS2021

Distribution, abundance, and genomic diversity of the endangered antioch dunes evening primrose (Oenothera deltoides subsp. howellii) surveyed in 2019

Sand dune ecosystems are highly dynamic landforms found along coastlines and riverine deltas where a supply of sand-sized material is available to be delivered by aquatic and wind environments. These unique ecosystems provide habitat for a variety of endemic and rare plant and animal species. Sand dunes have been affected by human development, sand mining, and shoreline stabilization from invasive weeds. This report provides a summary of a comprehensive literature review, field survey, and genomic analysis for the Antioch Dunes evening primrose ( Oenothera deltoides subsp. howellii , hereafter howellii ), an endemic species to the San Francisco Bay-Delta, California, which was listed as a federally endangered subspecies in 1978. Howellii is found on a historic dune sheet (the Antioch sand sheet) near the confluence of the Sacramento and San Joaquin Rivers. The Antioch sand sheet has been greatly altered by sand mining and land conversion into agriculture and urban development. In chapter A, we describe results of the literature review and field survey. We found howellii at eight locations with over 90 percent of the adult population and nearly 99 percent of juveniles observed on the Antioch Dunes National Wildlife Refuge. We measured a negative relationship between howellii numbers and invasive weed cover, illustrating the importance of mobilized open sand for this species. In chapter B, we describe the genomic study results. We surveyed genomic diversity by using double-digest restriction-site associated sequencing to estimate population genetic structure and levels of diversity across all surveyed occurrences. The genomic analyses included outgroup samples of the closely related Oenothera deltoides subsp. cognata and three occurrences of an unknown taxon with intermediate morphology to cognata and howellii , which also occurs on the Antioch sand sheet, east of the Antioch Dunes National Wildlife Refuge. These three morphologically distinctive groups formed genetically distinctive clusters and well-supported monophyletic clades in clustering and phylogenetic analyses, respectively. There was no indication of recent hybridization among any of the groups. Among howellii occurrences, the Antioch Dunes National Wildlife Refuge contained the greatest genetic diversity. Our approach, which combined field surveys, habitat assessments, and genetic analyses, can provide useful information for the conservation and management of rare and at-risk plant species and highlights the uniqueness of the Antioch sand sheet floral diversity through the discovery of a putative new taxon within the bird-cage evening primrose species complex.

California↗
USGS2007

Historical Changes in Precipitation and Streamflow in the U.S. Great Lakes Basin, 1915-2004

The total amount of water in the Great Lakes Basin is important in the long-term allocation of water to human use and to riparian and aquatic ecosystems. The water available during low-flow periods is particularly important because the short-term demands for the water can exceed the supply. Precipitation increased over the last 90 years in the U.S. Great Lakes Basin. Total annual precipitation increased by 4.5 inches from 1915 to 2004 (based on the average of 34 U.S. Historical Climatology Network stations), 3.5 inches from 1935 to 2004 (average of 34 stations), and 4.2 inches from 1955 to 2004 (average of 37 stations). Variability in precipitation from year to year was large, but there were numerous years with relatively low precipitation in the 1930s and 1960s and many years with relatively high precipitation after about 1970. Annual runoff increased over the last 50 years in the U.S. Great Lakes Basin. Mean annual runoff increased by 2.6 inches, based on the average of 43 U.S. Geological Survey streamflow-gaging stations from 1955 to 2004 on streams that were relatively free of human influences. Variability in runoff from year to year was large, but on average runoff was relatively low from 1955 to about 1970 and relatively high from about 1970 to 1995. Runoff increased at all stations in the basin except in and near the Upper Peninsula of Michigan, where relatively small runoff decreases occurred. Changes in annual runoff for the 16 stations with data from 1935 to 2004 were similar to the changes from 1955 to 2004. The mean annual 7-day low runoff (the lowest annual average of 7 consecutive days of runoff) increased from 1955 to 2004 by 0.048 cubic feet per second per square mile based on the average of 27 stations. Runoff in the U.S. Great Lakes Basin from 1955 to 2004 increased for all months except April. November through January and July precipitation and runoff increased by similar amounts. There were differences between precipitation and runoff changes for February, March, and April, which were likely due to lower ratios of snowfall to rain and earlier snowmelt runoff in recent years. Increases in precipitation were larger than increases in runoff for May, June, August, September, and October. Some of this difference could be due to the different locations of the precipitation and streamflow stations in the basin. Part of the difference may be explained by changes in evapotranspiration. Some of the few highly urbanized and highly regulated stations analyzed in this report had larger increases in annual 7-day low-runoff from 1955 to 2004 than any of the stations in the U.S. Great Lakes Basin that are on streams relatively free of human influences. This demonstrates the human influence over time on very low streamflows. Changes-even over periods as long as 90 years-can be part of longer cycles. Previous studies of Great Lakes Basin precipitation and St. Lawrence River streamflow, using data from the mid-1800s to the late-1900s, showed low precipitation and streamflow in the late 1800s and early 1900s relative to earlier and later periods.

Scientific Investigations Report↗
USGS2019

Characterizing the influence of fire on hydrology in southern California

The chaparral-dominated national forests of southern California were in part established to provide water provision services to the surrounding urban populations and irrigation for agriculture. However, water provision in the form of groundwater recharge and surface runoff depends on the climatological conditions of any given year and also landscape-scale disturbances such as fire. Fire is increasing in frequency in southern California and understanding its impacts both immediately postfire and as vegetation recovers, and the interactions between fire and hydrology, are key components to managing federal lands effectively. In this study we focus on nine fires in a study area that encompasses the four southern California national forests (Los Padres, Angeles, San Bernardino, and Cleveland) and use a water balance model to investigate the effects of water provision services post-fire at a regional scale. We found that runoff and recharge increased post-fire, with increases in recharge being greater with recovery times ranging from 2 to 4 y post-fire. Vegetation recovery occurred 2 y post-fire for all basins as indicated by remotely sensed imagery measuring vegetation greenness having returned to or exceeded pre-fire values for the basin. We found that runoff and recharge were more sensitive to the effects of climate than to length of time post-fire. Findings from these modeling tools allow users to anticipate the impact of fire on water provision services in the region and develop management strategies that help reduce the impacts of wildfire.

California↗