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Accurate simulation of flow through dipping aquifers with MODFLOW 6 using enhanced cell connectivity

In simulations of groundwater flow through dipping aquifers, layers of model cells are often “deformed” to follow the top and bottom elevations of the aquifers. When this approach is used in MODFLOW, adjacent cells within the same model layer are vertically offset from one another, and the standard conductance-based (two-point) formulation for flow between cells does not rigorously account for these offsets. The XT3D multi-point flow formulation in MODFLOW 6 is designed to account for geometric irregularities in the grid, including vertical offsets, and to provide accurate results for both isotropic and anisotropic groundwater flow. A recent study evaluated the performance of the standard formulation and XT3D using a simple, synthetic benchmark model of a steeply dipping aquifer. Although XT3D generally improved the accuracy of flow simulations relative to the standard formulation as expected, neither formulation produced accurate flows in cases that involved large vertical offsets. In this paper, we explain that the inability of XT3D to produce accurate flows in the steeply dipping aquifer benchmark was not due to an inherent limitation of the flow formulation, but rather to the limited cell connectivity inherent in the most commonly used discretization packages in MODFLOW 6. Furthermore, we demonstrate that XT3D is able to produce the expected accuracy when adequate cell connectivity is introduced using MODFLOW's unstructured grid type and the aquifer is discretized vertically using at least two model layers.

Groundwater

Detecting hidden sedimentary geothermal systems in the Upper Colorado River Basin

Geothermal resources exist in sedimentary rock where circulation of water for efficient extraction or storage of heat is possible. Except in rare instances where hot water is expressed at the land surface, sedimentary geothermal resources are hidden, so the identification of these systems is optimally accomplished using predictive subsurface modeling. An integrated approach using detailed paleogeographic interpretations, subsurface geologic mapping, and numerical modeling has produced regional geologic and temperature models for the Upper Colorado River Basin, a large watershed in central North America that contains many sedimentary basins. These models identify areas of hidden sedimentary geothermal resource potential in low temperature (<90°C), moderate temperature (90–150°C), and high temperature (>150°C) fairways across the study area. These models incorporate maps of key horizons in outcrop and the subsurface to create a robust structural framework that can be used to target favorable geology for natural or engineered permeability. This framework is populated with lithologies derived from detailed palaeogeographical maps and over 40,000 bottom hole temperature (BHT) values were used to create a calibrated three-dimensional (3D) temperature model across the region. The resulting maps serve as a regional sedimentary geothermal play fairway screening tool for evaluating different grades of sedimentary geothermal resources and for identifying areas of interest where more detailed, prospect-scale studies can be undertaken.

Arizona, Colorado, New Mexico, Utah, Wyoming

From model to action: Identifying the gaps in coastal marsh models for decision making

Coastal salt marsh modeling projects are designed to answer questions about where salt marshes may migrate, how they can migrate, and how they will be impacted by changing water levels. While this information is vital for climate-resilient marsh conservation, translating these findings into actionable results remains a challenge. The authors examined the actionability of marsh modeling efforts in the United States by analyzing data collected from semi-structured interviews of marsh model users ( n = 24) across two ongoing projects along the U.S. East Coast and the Gulf of America (Gulf of Mexico). By qualitatively analyzing the interview data, the authors found that the tasks of practitioners who use coastal marsh model outputs fall into three major themes: (1) marsh restoration, (2) planning with uncertainty, and (3) conserving habitat for marsh-reliant species. For each of these themes, the authors identify unmet needs, including high spatial resolution information for local planning, accessible descriptions of uncertainty to increase user confidence, and the incorporation of human dimensions data (e.g., human alterations to the landscape such as impoundments and culverts) for a comprehensive understanding of the coastal salt marsh. Marsh modeling projects should strategize how to fulfil these unmet user needs so that marsh modeling outputs can better support decisions related to marsh conservation and restoration.

Gulf of America, United States East Coast

Ten new insights in climate science 2025

Interdisciplinary understanding is vital for delivering sound climate policy advice. However, navigating the ever-growing and increasingly diverse scholarly literature on climate change is challenging for any individual researcher. This annual synthesis highlights and explains recent advances across a variety of fields of climate change research. This year, the 10 insights focus on: (1) the record-warmth of 2023/2024 and the elevated Earth energy imbalance; (2) acceleration of ocean warming and intensifying marine heatwaves; (3) northern land carbon sinks under strain; (4) reinforcing feedback between biodiversity loss and climate change; (5) accelerated depletion of groundwater; (6) global dengue incidence; (7) global income losses and labour productivity declines; (8) strategic scaling of CDR; (9) integrity challenges in carbon credit markets and emerging responses; and (10) effective policy mixes for emissions reductions. The insights have been written to be accessible to researchers from different fields, serving as entry-points to specific topics, as well as providing an overview of the evolving landscape of climate change research. In the final section, the insights are used to develop overarching policy-relevant messages. This paper provides the basis for a science-policy report that was shared with all Party delegations ahead of COP30 in Belém, Brazil.

Global Sustainability

Forecasting volcanic activity in Germany—A multi-criteria approach

Igneous activity, including shallow intrusions and volcanism, has the potential to disrupt underground critical infrastructure. Notably, future underground infrastructure projects like high-level radioactive waste repositories must be sited in areas of extremely low disruption probability by igneous activity. In Germany, according to the Repository Site Selection Act of 2017 (Standortauswahlgesetz, or StandAG), areas in which Quaternary volcanism is either present or future volcanic activity is expected within the next 1 million years (m.y.) must be excluded from the site selection process. Although the locations of regions with Quaternary volcanism are reasonably well known in Germany, forecasting potential igneous activity at intraplate volcanic fields is challenging, as many processes and their interactions control the spatial distribution of volcanic centers. Here, a semi-quantitative, multi-criteria approach is proposed for a regional evaluation of the relative potential of future igneous activity in Germany. A variety of geoscientific indicators are used, including seismic anomalies in Earth’s mantle, gravity data, tectonic activity, sutures, ground motion, earthquakes, mantle degassing centers, and geochronological data of volcanic rocks. The indicators describe the sequence of processes from potential melt generation in Earth’s mantle, through ascent and accumulation of melt within the lithosphere, to eruption at Earth’s surface. In total, 15 out of 30 proposed geoscientific indicators are selected and quantified using 20 total assigned parameters. Defined threshold values are used to spatially delimit relevant parameter properties to focus on areas with higher potential of future magmatic activity. To consider uncertainties of parameters and their underlying processes, which are usually more spatially extensive below ground, buffer zones are defined in which values of relevance decrease with increasing distance from the initial lateral shape of a parameter. Normalized parameters are combined into an index, whose spatial value distribution is used to differentiate the relative potential of future igneous activity (within the next 1 m.y.). The sensitivity of the results is shown by varying the weighting factors for the relevant parameters in country-wide index maps. Thereby, profiles illustrate the distribution of the resulting index values and respective index fractions of various parameters. Different index maps for the relative potential of future igneous activity are presented and can be used for hazard assessments.

Professional Paper

Groundwater surveillance of swine pathogens from private wells supplying swine farms in Iowa

Biosecurity practices are essential for maintaining pig health and productivity. Despite these measures, pathogen spread still occurs. Water is one of the largest daily inputs on swine farms by volume and is not routinely tested or disinfected before it is consumed by the animals [1-3], making it a poorly understood biosecurity risk. Groundwater from privately-owned wells is a common water source for swine farms. Pathogens in the landscape, such as bacteria, viruses, and protozoa, can reach groundwater more rapidly through soil macropores, maintaining viability and facilitating transmission of pathogens into aquifers [3-13].

Iowa

Rainfall intensification amplifies exposure of American Southwest to conditions that trigger postfire debris flows

Short-duration, high-intensity rainfall can initiate deadly and destructive debris flows after wildfire. Methods to estimate the conditions that can trigger debris flows exist and guidance to determine how often those thresholds will be exceeded under the present climate are available. However, the limited spatiotemporal resolution of climate models has hampered efforts to characterize how rainfall intensification driven by global warming may affect debris-flow hazards. We use novel, dynamically downscaled (3.75-km), convection-permitting simulations of short-duration (15-min) rainfall to evaluate threshold exceedance for late 21st-century climate scenarios in the American Southwest. We observe significant increases in the frequency and magnitude of exceedances for regions dominated by cool- and warm-season rainfall. We also observe an increased frequency of exceedance in regions where postfire debris flows have not been documented, and communities are unaccustomed to the hazard. Our findings can inform planning efforts to increase resiliency to debris flows under a changing climate.

Arizona, California, Nevada, New Mexico, Utah

Rebuilding a volcano one lava flow at a time—Visualizing the lava dome-building eruption in the crater of Mount St. Helens, 1982–1986

Between 1980 and 1986, the U.S. Geological Survey made a series of 1:2,000-scale topographic contour maps from aerial photographic surveys to monitor the eruption. These maps were made for operational purposes and were not intended for publication. Since then, advances in technology made it possible to digitize the original, highly detailed hardcopy maps and derive new digital data elevation models of the surface of the lava dome. These digital elevation models allow for the visualization of the progression of the eruption and reveal the rubbly, chaotic surface of the lava flows and dome. Additionally, these new data help fill gaps in the long-term record of topographic changes that have occurred at the volcano since the May 18, 1980, eruption.

Washington

Examining 22 years of ambient seismic wavefield at Mount St. Helens

An increase in seismic activity precedes most volcanic eruptions. Whereas event-based forecasting approaches have been successful, some eruptions remain unanticipated, resulting in casualties and damage. Our study leverages the recent advancements in ambient field seismology. We explore features extracted from continuous ambient fields using traditional methods, for example, peak ground velocity, peak ground acceleration, root mean square, root median square, real-time seismic amplitude measurement, and novel methods (displacement seismic amplitude ratio and spectral width). In addition, we explore unsupervised learning of higher order wavelet features using scattering networks. We find that combining all the methods was necessary to disentangle the effects of seismic sources from structural changes at Mount St. Helens. Although the ambient wavefield-based approach does not yield additional or more significant precursory signals than event-based methods at Mount St. Helens, our study demonstrates that the ambient wavefield provides supplementary information, mainly about structural changes and complements traditional methods. The ambient seismic wavefield offers additional insights into long-lasting processes. We find enhanced wave attenuation correlating with geochemical measurements. We interpret this as ongoing structural changes, such as dome growth or the evolution of the volcanic conduit system. On annual and decadal timescales, we interpret seasonal seismic attenuation in the shallow subsurface as groundwater fluctuations, corroborated by observations at the nearby Spirit Lake level. This multimethod approach at Mount St. Helens sheds light on a volcanic system’s underlying dynamics and structure.

Washington

Refinements to the attenuated propagation of local earthquake shaking (APPLES) ground-motion-based earthquake early warning algorithm

We refined the Attenuated ProPagation of Local Earthquake Shaking (APPLES) ground-motion-based earthquake early warning (EEW) approach, and directly compare APPLES performance with that of the source-characterization-based U.S. ShakeAlert EEW system for a suite of historical earthquakes in the U.S. West Coast and Japan. APPLES is an extension of the Propagation of Local Undamped Motion (PLUM) algorithm in which observed shaking intensity at seismic stations is used to forward-predict intensity distributions to surrounding areas using an attenuation model derived from an intensity prediction equation. We test new configuration options within APPLES, such as using the second highest estimated ground motion rather than the maximum, to better match median ground-motion observations and reduce alerts for small magnitude earthquakes, both of which are key alerting priorities within ShakeAlert. We evaluate these configurations alongside ShakeAlert by comparing the ground-motion estimation accuracy and available warning times relative to station observations and ShakeMap distributions. Our preferred APPLES configuration produces accurate ground-motion estimates and corresponds better with median observations compared to ShakeAlert’s estimates. This preferred configuration substantially reduces alert issuance for M < 5.0 earthquakes compared to the previous APPLES configuration, and alert-release criteria can further restrict alerts to primarily M ≥ 5.5 earthquakes without requiring magnitude estimation. Prioritizing matching median-observed ground motions may reduce APPLES warning times compared to configurations that were tuned to avoid missed alerts (such as those that use the maximum estimated ground motions), which can lead to shorter warning times compared to ShakeAlert for the same alert threshold. However, station-based warning time assessments demonstrate that APPLES can outperform ShakeAlert for high target thresholds. APPLES is a simple, independent EEW approach that may improve the robustness of EEW for the West Coast of the U.S.

California, Oregon, Washington

Late Miocene Colorado River arrival in the Bidahochi basin supports spillover origin of Grand Canyon

The timing and mechanism of the integration of the Colorado River and incision of the Grand Canyon remain among geology’s enduring controversies. A key question is the configuration of the upper Colorado River watershed between 11 and 6 million years ago. In this study, we present new evidence from zircon uranium-lead geochronology for the arrival of distinctive Colorado–Green River sediment in the Bidahochi basin by 6.6 million years ago derived from the Browns Park Formation. This is coeval with an order-of-magnitude increase in depositional rate, an increase in carbonate strontium isotope ( 87 Sr/ 86 Sr) ratios, the appearance of large fish species characteristic of fast-flowing waters, and other sedimentological changes. This evidence is consistent with the Colorado River supplying water and sediment to the Bidahochi basin before spillover integration of the river through the Grand Canyon.

Arizona, Nevada, Utah

A temporal look at the influence of topographic amplification on earthquake-triggered landslides in 3D seismic simulations

Earthquakes are a primary trigger for landslides, often leading to catastrophic consequences. While numerous studies have explored the spatial distribution of earthquake-triggered landslides, understanding the interaction between seismic waves and topography remains a critical challenge. Topographic irregularities can cause seismic wave amplification, altering ground shaking, and can trigger landslides that are challenging for predictive models to anticipate. This study investigates the spatial and temporal evolution of topographically amplified landslides, focusing on coseismic landslides triggered by the Mw 7.5 mainshock of the 2018 Papua New Guinea earthquake and post-seismic landslides associated with its four aftershocks, each exceeding Mw 6.0. We employ low-frequency, three-dimensional numerical ground shaking simulations and data-driven multivariate analyses to examine how landslides evolved from the coseismic to post-seismic periods. Our findings reveal a spatial shift in landslide distribution, in which the mainshock triggered slope failures predominantly on steep hillslopes, and the aftershocks triggered landslides on gentler slopes, often near geologic boundaries. We attribute this transition partly to the earthquake legacy effect of the mainshock, where the mainshock caused weakening of these hillslopes, making them more prone to failure when aftershocks occur. Additionally, the concentration of failures along geologic contacts in the post-seismic phase suggests that site amplification, stemming from contrasts in subsurface materials, exerts a key influence on landslide occurrence. Although not explicitly captured in our current numerical simulations, this mechanism warrants further investigation for more accurate hazard modeling.

JGR Solid Earth

Repeated coseismic uplift of coastal lagoons above the Patton Bay Splay Fault System, Montague Island, Alaska, USA

Coseismic slip on the Patton Bay splay fault system during the 1964 M w 9.2 Great Alaska Earthquake contributed to local tsunami generation and vertically uplifted shorelines as much as 11 m on Montague Island in Prince William Sound (PWS). Sudden uplift of 3.7–4.3 m caused coastal lagoons along the island's northwestern coast to gradually drain. The resulting change in depositional environment from marine lagoon to freshwater muskeg created a sharp, laterally continuous stratigraphic contact between silt and overlying peat. Here, we characterize the geomorphology, sedimentology, and diatom ecology across the 1964 earthquake contact and three similar prehistoric contacts within the stratigraphy of the Hidden Lagoons locality. We find that the contacts signal instances of abrupt coastal uplift that, within error, overlap the timing of independently constrained megathrust earthquakes in PWS—1964 Common Era, 760–870 yr BP, 2500–2700 yr BP, and 4120–4500 yr BP. Changes in fossil diatom assemblages across the inferred prehistoric earthquake contacts reflect ecological shifts consistent with repeated draining of a lagoon system caused by >3 m of coseismic uplift. Our observations provide evidence for four instances of combined megathrust-splay fault ruptures that have occurred in the past ∼4,200 years in PWS. The possibility that 1964-style combined megathrust-splay fault ruptures may have repeated in the past warrants their consideration in future seismic and tsunami hazards assessments.

Alaska

Fluid inclusion constraints on the geometry of the magmatic plumbing system beneath Mauna Loa – Part 2: Xenoliths

Mauna Loa volcano erupts crystal-poor material at its summit and more crystal-rich material on its rift zones. Some of the more olivine-rich lava flows contain xenoliths with diverse mineralogy, including cumulate harzburgites with high-Mg# orthopyroxenes and high-Fo olivines (both > 84). Previous experimental work and thermodynamic modelling has proposed that high-Mg# orthopyroxenes only crystallize from Mauna Loa melts at high pressures (> 6 kbar, > 20 km), leading to suggestions that there is a region of sub-Moho magma storage at Mauna Loa in addition to the geophysically imaged magma reservoir at 2–5 km depth below the summit. We use melt and fluid inclusion barometry combined with thermodynamic models to further investigate this suggestion. Fluid inclusion data from harzburgites and dunitic xenoliths yield storage depths remarkably similar to those found in non-xenolithic crystals from lavas and tephras, with a clear peak at ~ 2–3 km (below the summit). Depths from melt inclusions in these xenoliths overlap with fluid inclusion pressures, ruling out the possibility of fluid inclusion re-equilibration during a period of stalling in a shallower reservoir. We examine five different thermodynamic models and find that the minimum pressure of olivine-orthopyroxene co-saturation varies by ~ 4 kbar (~ 12 km). These models also fail to predict that orthopyroxene is stable in ~ 15–80% of compositionally relevant experimental charges which grew orthopyroxene. Overall, this shows that phase stability modelling is an unreliable method of determining magma storage depth at Mauna Loa. We suggest that model discrepancies reflect a lack of experimental constraints on orthopyroxene stability at > 1200 ℃ and 0.01–5 kbar. Based on the presence of large oikocrystic orthopyroxenes completely enclosing rounded olivine chadacrysts, we suggest that these harzburgitic xenoliths formed through the reaction of intruding melts with olivine mush piles within the Mauna Loa edifice at ~ 3 km depth below the summit, with no need for a deeper storage reservoir. The predominance of pre-eruptive shallow storage means that there is more chance of detecting reservoir destabilization with geophysical monitoring techniques compared to a scenario where melts are supplied from sub-Moho reservoirs.

Hawaii

Using probability difference to compare streamflow information of alternatives for efficient operation of monitoring networks

Efficient operation of streamflow monitoring networks requires investments in technology and labor that provide the greatest benefits from available resources. Economic analyses comparing the costs and benefits from different types of alternatives for monitoring have not been practical to implement. Streamflow information provides a generic measure of benefits that can be incorporated into operational decisions as an objective for monitoring networks. A methodology for comparing how accuracy, monitoring period, and monitoring instead of modeling affects streamflow information is developed from information-theoretic approaches for network design but contributes three novel features: (1) a probability-difference model for conditional probability of monotonically paired variables, (2) explicit discounting of unverified information that may exceed the accuracy of streamflow records, and (3) run analysis to account for non-stationarity in streamflow probabilities. Application of the methodology to the U.S. Geological Survey streamflow monitoring network indicates the value of monitoring period to reduce the uncertainty of streamflow probabilities and, thus, increase streamflow information. The methodology has important limitations, particularly for sites with non-perennial streamflow, but demonstrates that probability difference could be used to evaluate operational alternatives to increase the efficiency of monitoring networks.

PLOS Water

Carbonatite-hosted residual REE deposits

Rare earth elements (REEs) occur in magmatic rocks but are especially enriched in carbonatite and alkaline silicates. If these rocks are chemically weathered, then the REEs may become further enriched within the regolith developed from these rocks. Primary magmatic REE minerals, as well as the various carbonate minerals and apatite, provide the REEs which, under pervasive chemical weathering, are incorporated within low-temperature REE minerals forming within the regolith. Many of these minerals, as well as their textures, are characteristic of this mode of formation. Lateritic conditions of weathering are instrumental in producing a thick, weathered, or regolith, profile, and the roles of sulfide oxidation, fluctuating groundwater tables, and downward mass wasting due to carbonate dissolution are identified as the most important controls on REE enrichment in the regolith.

Book chapter

Cursed? Why one does not simply add new data sets to supervised geothermal machine learning models

Recent advances in machine learning (ML) identifying areas favorable to hydrothermal systems indicate that the resolution of feature data remains a subject of necessary improvement before ML can reliably produce better models. Herein, we consider the value of adding new features or replacing other, low-value features with new input features in existing ML pipelines. Our previous work identified stress and seismicity as having less value than the other feature types (i.e., heat flow, distance to faults, and distance to magmatic activity) for the 2008 USGS hydrothermal energy assessment; hence, a fundamental question regards if the addition of new but partially correlated features will improve resulting models for hydrothermal favorability. Therefore, we add new maps for shear strain rate and dilation strain rate to fit logistic regression and XGBoost models, resulting in new 7-feature models that are compared to the old 5-feature models. Because these new features share a degree of correlation with the original relatively uninformative stress and seismicity features, we also consider replacement of the two lower-value features with the two new features, creating new 5-feature models. Adding the new features improves the predictive skill of the new 7-feature model over that of the old 5-feature model; albeit, that improvement is not statistically significant because the new features are correlated with the old features and, consequently, the new features do not present considerable new information. However, the new 5-feature XGBoost model has a statistically significant increase in predictive skill for known positives over the old 5-feature model at p = 0.06. This improved performance is due to the lower-dimensional feature space of the former than that of the latter. In higher-dimensional feature space, relationships between features and the presence or absence of hydrothermal systems are harder to discern (i.e., the 7-feature model likely suffers from the “curse of dimensionality”).

Geothermal Resources Council Transactions

Modeling interconnected minerals markets with multicommodity supply curves: Examining the copper-cobalt-nickel system

Demand for many of the metals used in the energy transition is expected to grow rapidly. Many of these are by-products, often considered critical because their production responds weakly to prices and is instead tied to the economics of the host mineral. We present a model of prices and production for jointly produced commodities that accounts for interconnectivity between host and by-product markets at the mine level. We demonstrate this method using the copper–cobalt–nickel system, in which approximately 99% of cobalt is a by-product of copper or nickel mining. Our results show that the model more accurately captures the economic benefits of diversified mine outputs than previous approaches. Furthermore, changes in demand drivers for any two commodities produce non-linear effects on production and price. We challenge the prior best-practice assumption that cobalt cannot impact the copper or nickel markets. Recognizing the importance of both copper and cobalt for future electrification, we emphasize that incentivizing the copper industry to reduce cobalt supply risks could inadvertently undermine copper supply.

Nature Communications