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At least 1,513 records · Page 84Linked to original sources
USGS2007

Forest legacies, climate change, altered disturbance regimes, invasive species and water

The factors that must be considered in seeking to predict changes in water availability has been examined. These factors are the following: forest legacies including logging, mining, agriculture, grazing, elimination of large carnivores, human-caused wildfire, and pollution; climate change and stream flow; altered disturbances such as frequency intensity and pattern of wildfires and insect outbreaks as well as flood control; lastly, invasive species like forest pests and pathogens. An integrated approach quantifying the current and past condition trends can be combined with spatial and temporal modeling to develop future change in forest structures and water supply. The key is a combination of geographic information system technologies with climate and land use scenarios, while preventing and minimizing the effects of harmful invasive species.

Unasylva↗
USGS2008

Pathology, physiologic parameters, tissue contaminants, and tissue thiamine in morbid and healthy central Florida adult American alligators (Alligator mississippiensis)

An investigation of adult alligator (Alligator mississippiensis) mortalities in Lake Griffin, central Florida, was conducted from 1998-2004. Alligator mortality was highest in the months of April and May and annual death count peaked in 2000. Bacterial pathogens, heavy metals, and pesticides were not linked with the mortalities. Blood chemistry did not point to any clinical diagnosis, although differences between impaired and normal animals were noted. Captured alligators with signs of neurologic impairment displayed unresponsive and uncoordinated behavior. Three of 21 impaired Lake Griffin alligators were found to have neural lesions characteristic of thiamine deficiency in the telencephalon, particularly the dorsal ventricular ridge. In some cases, lesions were found in the thalamus, and parts of the midbrain. Liver and muscle tissue concentrations of thiamine (vitamin B"1) were lowest in impaired Lake Griffin alligators when compared to unimpaired alligators or to alligators from Lake Woodruff. The consumption of thiaminase-positive gizzard shad (Dorosoma cepedianum) is thought to have been the cause of the low tissue thiamine and resulting mortalities. ?? Wildlife Disease Association 2008.

Journal of Wildlife Diseases↗
USGS2012

Invertebrate assemblages in the lower Klamath River, with reference to Manayunkia speciosa

The freshwater polychaete, Manayunkia speciosa Leidy (Canalipalpata Sabellidae), is the intermediate host for two myxozoan pathogens (Ceratomyxa shasta and Parvicapsula minibicornis) that cause substantial mortalities of juvenile salmon in the Pacific Northwest, particularly in the Klamath River below Iron Gate Dam in California. Information on the distribution of M. speciosa in the Klamath River may facilitate targeted control of polychaete populations to disrupt the parasites that affect fish populations. We sampled invertebrate assemblages in the lower Klamath River in the summer and fall of 2005 and 2006 to estimate distribution patterns of M. speciosa and to characterize assemblage structure of invertebrates in reaches where the polychaete was both collected and not collected. The polychaete was most often found in a reach of river extending 100 km downstream from the Shasta River (river km 185-287). The reach in which it was found supported high taxonomic richness of invertebrates and a high abundance of filtering collectors including marine relicts such as sponges, unioinid mussels, and bryozoans. We suggest that the large, stable substrate on which these were found represents primary, optimal habitat for the polychaete, also a marine relict. Reaches above and below the zone where we collected polychaetes showed a general trend of reduced taxonomic richness as distance away from the polychaete zone increased, and also showed differing relative abundances of non-insect taxa and functional feeding groups. Differences in invertebrate assemblages between years were coincident with large differences in water flows. We suggest flows and food resources may play important roles in invertebrate distribution patterns.

California Fish and Game↗
USGS2011

Prominent emerging diseases within the United States

This manuscript reviews disease syndromes that have become significant aquatic animal health issues within the United States since 2003. The emergence of Viral Hemorrhagic Septicemia (VHS) disease among wild fish in the Great Lakes is probably the most problematic and political issue. The emergence of this pathogen resulted in the issuance of a 2006 VHSV Federal order that placed restrictions on the movement of certain species of fish in the eight states that border the Great Lakes (New York, Pennsylvania, Ohio, Indiana, Illinois, Michigan, and Wisconsin and Minnesota) as well as the movement of live fish into the United States from the Ontario and Quebec Provinces, Canada. Spring Viremia of Carp (SVC) was identified for the first times in the United States during 2002. It was diagnosed as the source of mortality among koi at a private facility in North Carolina as well as from feral carp in Cedar Lake (WI). In 2004, Koi Herpesvirus (KHV) killed 8,000 adult common carp (Cyprinus carpio) in the Chadakoin River (NY); it reoccurred the next year within Chautauqua Lake (NY), killing an estimated 25,000 carp (20–30 lbs. apiece). During the summers of 2007 and 2008, KHV epizootics also occurred among carp in Ontario (Canada). Finally, outbreaks of epizootic shell disease in American lobster (Homarus americanus) have generated concern along the southern New England coast and eastern Long Island Sound. The prevalence and severity of shell disease have increased within inshore areas of southern New England and resulted in significant decreases in lobster catches and marketability.

Conference Paper↗
USGS2012

Alternative barging strategies to improve survival of salmonids transported from Lower Granite Dam: Final report from the 2006-2008 spring/summer Chinook salmon and Steelhead juvenile migrations

In 2011, the final year class of adult salmon Oncorhynchus spp. returned from smolt groups released for a multi-year study to evaluate an alternate release site for transported fish. Smolts were collected and tagged at Lower Granite Dam, transported, and released at the alternate site near Astoria, Oregon (river kilometer 10) or at the traditional release site near Skamania Landing (rkm 225) just downstream of Bonneville Dam. Study fish were juvenile steelhead O. mykiss and yearling spring/summer Chinook salmon O. tshawytscha , and our evaluation was based on comparisons of smolt-to-adult return rates (SARs) between replicate paired groups. Our hypothesis was that moving the traditional barge-release site 215 km downstream could increase adult returns by decreasing smolt mortality due to predation by piscivorous fish and birds. Paired groups were released weekly over 6 weeks during the migration seasons of 2006, 2007, and 2008. The last adult steelhead from these releases returned in May 2011 (2-ocean), and the last adult Chinook salmon in August 2011 (3-ocean). We found no evidence of a consistent difference in SARs for fish released at the two barge-release locations. Data were not sufficient to evaluate the effects of fish pathogens on avian predation. There was clear evidence that fish of both species released at Astoria were less vulnerable to avian predators than those released at the customary site at Skamania Landing. Unfortunately, this survival benefit did not translate to higher SARs, as it was offset by higher rates of straying by fish released from Astoria. This was likely a result of greater impairment to homing ability for fish released at Astoria.

Oregon, Washington↗
USGS2014

Molecular epidemiology and evolution of fish Novirhabdoviruses

The genus Novirhabdoviridae contains several of the important rhabdoviruses that infect fish hosts. There are four established virus species: Infectious hematopoietic necrosis virus (IHNV), Viral hemorrhagic septicemia virus (VHSV), Hirame rhabdovirus (HIRRV), and Snakehead rhabdovirus (SHRV). Viruses of these species vary in host and geographic range, and they have all been studied at the molecular and genomic level. As globally significant pathogens of cultured fish, IHNV and VHSV have been particularly well studied in terms of molecular epidemiology and evolution. Phylogenic analyses of hundreds of field isolates have defined five major genogroups of IHNV and four major genotypes of VHSV worldwide. These phylogenies are informed by the known histories of IHNV and VHSV, each involving a series of viral emergence events that are sometimes associated with host switches, most often into cultured rainbow trout. In general, IHNV has relatively low genetic diversity and a narrow host range, and has been spread from its endemic source in North American to Europe and Asia due to aquaculture activities. In contrast, VHSV has broad host range and high genetic diversity, and the source of emergence events is virus in widespread marine fish reservoirs in the northern Atlantic and Pacific Oceans. Common mechanisms of emergence and host switch events include use of raw feed, proximity to wild fish reservoirs of virus, and geographic translocations of virus or naive fish hosts associated with aquaculture.

Book chapter↗
USGS2012

Changing climate, changing forests: the impacts of climate change on forests of the northeastern United States and eastern Canada

Decades of study on climatic change and its direct and indirect effects on forest ecosystems provide important insights for forest science, management, and policy. A synthesis of recent research from the northeastern United States and eastern Canada shows that the climate of the region has become warmer and wetter over the past 100 years and that there are more extreme precipitation events. Greater change is projected in the future. The amount of projected future change depends on the emissions scenarios used. Tree species composition of northeast forests has shifted slowly in response to climate for thousands of years. However, current human-accelerated climate change is much more rapid and it is unclear how forests will respond to large changes in suitable habitat. Projections indicate significant declines in suitable habitat for spruce-fir forests and expansion of suitable habitat for oak-dominated forests. Productivity gains that might result from extended growing seasons and carbon dioxide and nitrogen fertilization may be offset by productivity losses associated with the disruption of species assemblages and concurrent stresses associated with potential increases in atmospheric deposition of pollutants, forest fragmentation, and nuisance species. Investigations of links to water and nutrient cycling suggest that changes in evapotranspiration, soil respiration, and mineralization rates could result in significant alterations of key ecosystem processes. Climate change affects the distribution and abundance of many wildlife species in the region through changes in habitat, food availability, thermal tolerances, species interactions such as competition, and susceptibility to parasites and disease. Birds are the most studied northeastern taxa. Twenty-seven of the 38 bird species for which we have adequate long-term records have expanded their ranges predominantly in a northward direction. There is some evidence to suggest that novel species, including pests and pathogens, may be more adept at adjusting to changing climatic conditions, enhancing their competitive ability relative to native species. With the accumulating evidence of climate change and its potential effects, forest stewardship efforts would benefit from integrating climate mitigation and adaptation options in conservation and management plans.

Connecticut;Labrador;Maine;Massachusetts;New Bruns↗
USGS2011

Global amphibian declines: perspectives from the United States and beyond

Over recent decades, amphibians have experienced population declines, extirpations and species-level extinctions at an alarming rate. Numerous potential etiologies for amphibian declines have been postulated including climate and habitat degradation. Other potential anthropogenic causes including overexploitation and the frequent introductions of invasive predatory species have also been blamed for amphibian declines. Still other underlying factors may include infectious diseases caused by the chytrid fungus Batrachochytrium dendrobatidis, pathogenic viruses (Ranavirus), and other agents. It is nearly certain that more than one etiology is to blame for the majority of the global amphibian declines, and that these causal factors include some combination of climatological or physical habitat destabilization and infectious disease, most notably chytridiomycosis. Scientific research efforts are aimed at elucidating these etiologies on local, regional, and global scales that we might better understand and counteract the driving forces behind amphibian declines. Conservation efforts as outlined in the Amphibian Conservation Action Plan of 2005 are also being made to curtail losses and prevent further extinctions wherever possible.

Conference Paper↗
USGS2013

Natural ecosystems

Natural Ecosystems analyzes the association of observed changes in climate with changes in the geographic distributions and phenology (the timing of blossoms or migrations of birds) for Southwestern ecosystems and their species, portraying ecosystem disturbances—such as wildfires and outbreaks of forest pathogens—and carbon storage and release, in relation to climate change.

Book chapter↗
USGS2012

The effects of feral cats on insular wildlife: the Club-Med syndrome

Domestic cats have been introduced to many of the world‘s islands where they have been particularly devastating to insular wildlife which, in most cases, evolved in the absence of terrestrial predatory mammals and feline diseases. We review the effects of predation, feline diseases, and the life history characteristics of feral cats and their prey that have contributed to the extirpation and extinction of many insular vertebrate species. The protozoan Toxoplasma gondii is a persistent land-based zoonotic pathogen hosted by cats that is known to cause mortality in several insular bird species. It also enters marine environments in cat feces where it can cause the mortality of marine mammals. Feral cats remain widespread on islands throughout the world and are frequently subsidized in colonies which caretakers often assert have little negative effect on native wildlife. However, population genetics, home range, and movement studies all suggest that there are no locations on smaller islands where these cats cannot penetrate within two generations. While the details of past vertebrate extinctions were rarely documented during contemporary time, a strong line of evidence is emerging that the removal of feral cats from islands can rapidly facilitate the recolonization of extirpated species, particularly seabirds. Islands offer unique, mostly self-contained ecosystems in which to conduct controlled studies of the effects of feral cats on wildlife, having implications for continental systems. The response of terrestrial wildlife such as passerine birds, small mammals, and herptiles still needs more thorough long-term monitoring and documentation after the removal of feral cats.

Conference Paper↗
USGS2014

Tick control: Trapping, bio-control, host management and other alternative strategies

Biology of Ticks is the most comprehensive work on tick biology and tick-borne diseases. This second edition is a multi-authored work, featuring the research and analyses of renowned experts across the globe. Spanning two volumes, the book examines the systematics, biology, structure, ecological adaptations, evolution, genomics and the molecular processes that underpin the growth, development and survival of these important disease-transmitting parasites. Also discussed is the remarkable array of diseases transmitted (or caused) by ticks, as well as modern methods for their control. This book should serve as a modern reference for students, scientists, physicians, veterinarians and other specialists. Volume II includes chapters on the ecology of non-nidicolous and nidicolous ticks, genetics and genomics (including the genome of the Lyme disease vector Ixodes scapularis) and immunity, including host immune responses to tick feeding and tick-host interactions, as well as the tick's innate immune system that prevents and/or controls microbial infections. Six chapters cover in depth the many diseases caused by the major tick-borne pathogens, including tick-borne protozoa, viruses, rickettsiae of all types, other types of bacteria (e.g., the Lyme disease agent) and diseases related to tick paralytic agents and toxins. The remaining chapters are devoted to tick control using vaccines, acaricides, repellents, biocontrol, and, finally, techniques for breeding ticks in order to develop tick colonies for scientific study.

Book chapter↗
USGS2014

Virtual Beach 3: user's guide

Virtual Beach version 3 (VB 3 ) is a decision support tool that constructs site-specific statistical models to predict fecal indicator bacteria (FIB) concentrations at recreational beaches. VB 3 is primarily designed for beach managers responsible for making decisions regarding beach closures or the issuance of swimming advisories due to pathogen contamination. However, researchers, scientists, engineers, and students interested in studying relationships between water quality indicators and ambient environmental conditions will find VB 3 useful. VB 3 reads input data from a text file or Excel document, assists the user in preparing the data for analysis, enables automated model selection using a wide array of possible model evaluation criteria, and provides predictions using a chosen model parameterized with new data. With an integrated mapping component to determine the geographic orientation of the beach, the software can automatically decompose wind/current/wave speed and magnitude information into along-shore and onshore/offshore components for use in subsequent analyses. Data can be examined using simple scatter plots to evaluate relationships between the response and independent variables (IVs). VB 3 can produce interaction terms between the primary IVs, and it can also test an array of transformations to maximize the linearity of the relationship The software includes search routines for finding the "best" models from an array of possible choices. Automated censoring of statistical models with highly correlated IVs occurs during the selection process. Models can be constructed either using previously collected data or forecasted environmental information. VB 3 has residual diagnostics for regression models, including automated outlier identification and removal using DFFITs or Cook's Distances.

Report↗
USGS2013

Avian disease assessment in seabirds and non-native passerines birds at Midway Atoll NWR

Midway Atoll in the Northwestern Hawaiian Islands supports the largest breeding colony of Laysan albatross ( Phoebastria immutabilis ) in the world and is a proposed site for the translocation of endangered Northwestern Hawaiian Island passerine birds such as the Nihoa finch ( Telespiza ultima ), Nihoa millerbird ( Acrocephalus familiaris kingi ), or Laysan finch ( Telespiza cantans ). On the main Hawaiian Islands, introduced mosquito-borne avian malaria ( Plasmodium relictum ) and avian pox ( Avipoxvirus ) have contributed to the extinction and decline of native Hawaiian avifauna. The mosquito vector ( Culex quinquefasciatus ) is present on Sand Island, Midway Atoll, where epizootics of Avipoxvirus have been reported among nestling Laysan albatross, black-footed albatross ( Phoebastria nigripes ), and red-tailed tropicbirds ( Phaethon rubricauda ) since 1963. Two introduced passerines, the common canary ( Serinus canaria ) and the common myna ( Acridotheres tristis ), are also present on Sand Island and may serve as reservoirs of mosquito-borne pathogens. Assessing disease prevalence and transmission potential at Midway Atoll National Wildlife Refuge (NWR) is a critical first step to translocation of Nihoa endemic passerines. In May 2010 and April 2012 we surveyed Midway Atoll NWR for mosquitoes and evidence of mosquito-borne disease. Although we did not observe active pox infections on albatross nestlings in May 2010, active infections were prevalent on albatross nestlings in April 2012. Presumptive diagnosis of Avipoxvirus was confirmed by PCR amplification of the Avipoxvirus 4b core protein gene from lesions collected from 10 albatross nestlings. Products were sequenced and compared to 4b core protein sequences from 28 Avipoxvirus isolates from the Hawaiian Islands and other parts of the world. Sequences from all Midway isolates were identical and formed a clade with other Avipoxvirus isolates from seabirds that was distinct from other Avipoxvirus isolates from the Hawaiian Islands. Tissue from three presumptive avian pox lesions from common canaries tested negative for Avipoxvirus . Blood samples from 124 canaries and 61 mynas tested negative for Plasmodium by one or more diagnostic tests based on microscopy, serology, or PCR diagnostics. Prevalence of Avipoxvirus infection was highest among albatross nestlings (94.6%) in the vicinity of the septic tanks where adult C. quinquefasciatus reached their highest densities, and data from all sites suggest a positive correlation between mosquito abundance and Avipoxvirus prevalence. Adult C. quinquefasciatus were also locally abundant around fishless, constructed wetlands. Since 1996, infrastructure removal and source reduction efforts by the refuge have greatly reduced the availability of underground and container habitats for larval mosquitoes on Sand Island. However, the creation of artificial wetlands and a central septic system on Sand Island has resulted in new, highly productive larval mosquito habitat for C. quinquefasciatus . Despite the presence of endemic Avipoxvirus in albatross nestlings and the introduction of mosquito vectors and two susceptible passerine species in the last century, we found no evidence of the avian malaria Plasmodium relictum or a passerine-infecting Avipoxvirus on Midway Atoll NWR that would interfere with the successful translocation of endemic Northwestern Hawaiian Island passerines. Without eradication of mosquitoes from Midway Atoll, however, periodic epizootics of Avipoxvirus among nestling seabirds will likely continue, and the introduction of malaria and passerine strains of Avipoxvirus from migratory birds will remain a long-term threat to passerine restoration programs.

Hawai'i↗
USGS2014

Effects of Renibacterium salmoninarum on olfactory organs of Chinook salmon ( Oncorhynchus tshawytscha ) marked with coded wire tags

Bacterial kidney disease (BKD) caused by Renibacterium salmoninaru m can cause significant morbidity and mortality in Chinook salmon ( Oncorhynchus tshawytscha ), particularly in Chinook salmon of the stream (spring) life history type, which migrate to sea as yearlings rather than subyearlings. R. salmoninarum can be transmitted vertically from the female parent to the progeny in association with the egg, as well as horizontally from fish to fish. This study was conducted as part of a research project to investigate whether the prevalence and intensity of R. salmoninarum infections in adult spring Chinook salmon could affect the survival and pathogen prevalence and intensity in their progeny (Pascho et al., 1991, 1993; Elliott et al., 1995). Fish from two brood years (1988 and 1989) were reared at Dworshak National Fish Hatchery (Idaho, USA) for about 1-1/2 years, released as yearling smolts, and allowed to migrate to the Pacific Ocean for maturation. The majority of progeny fish were marked with coded wire tags (CWTs) about 4 months before they were released from the hatchery so that adult returns could be monitored. The CWTs were implanted in the snouts of the fish by an experienced team of fish markers using automated wire-tagging machines. The intended placement site was the cartilage, skeletal muscle or loose connective tissue of the snout.

Report↗
USGS2003

Atmospheric transport of mold spores in clouds of desert dust

Fungal spores can be transported globally in clouds of desert dust. Many species of fungi (commonly known as molds) and bacteria--including some that are human pathogens--have characteristics suited to long-range atmospheric transport. Dust from the African desert can affect air quality in Africa, Europe, the Middle East, and the Americas. Asian desert dust can affect air quality in Asia, the Arctic, North America, and Europe. Atmospheric exposure to mold-carrying desert dust may affect human health directly through allergic induction of respiratory stress. In addition, mold spores within these dust clouds may seed downwind ecosystems in both outdoor and indoor environments.

Archives of Environmental Health↗
USGS2014

Prevalence of the amphibian chytrid fungus (Batrachochytrium dendrobatidis) at Buenos Aires National Wildlife Refuge, Arizona, USA

Information on disease presence can be of use to natural resource managers, especially in areas supporting threatened and endangered species that occur coincidentally with species that are suspected vectors for disease. Ad hoc reports may be of limited utility (Muths et al. 2009), but a general sense of pathogen presence (or absence) can inform management directed at T&E species, especially in regions where disease is suspected to have caused population declines (Bradley et al. 2002). The Chiricahua Leopard Frog (Lithobates chiricahuensis), a species susceptible to infection by the amphibian chytrid fungus (Batrachochytrium dendrobatidis, Bd) (Bradley et al. 2002), and the non-native, invasive American Bullfrog (L. catesbeianus), a suspected vector for chytridiomycosis (Schloegel et al. 2012, Gervasi et al. 2013), both occur at Buenos Aires National Wildlife Refuge (BANWR) and surrounding lands in southern Arizona. Efforts to eradicate the bullfrog from BANWR began in 1997 (Suhre, 2010). Eradication from the southern portion of BANWR was successful by 2008 but the bullfrog remains present at the Arivaca Cienega and in areas immediately adjacent to the refuge (Fig. 1). Curtailing the re-invasion of the bullfrog into BANWR will require vigilance as to ensure the health of Chiricahua Leopard Frog populations.

Arizona↗
USGS2015

Infectious diseases, parasites, and biological toxins in sea ducks

This chapter addresses disease agents in the broad sense, including viruses, bacteria, fungi, protozoan and helminth parasites, and biological toxins. Some of these agents are known to cause mortality in sea ducks, some are thought to be incidental findings, and the significance of others is yet poorly understood. Although the focus of the chapter is on free-living sea ducks, the study of disease in this taxonomic group has been relatively limited and examples from captive sea ducks and other wild waterfowl are used to illustrate the pathogenicity of certain diseases. Much of the early work in sea ducks consisted of anecdotal and descriptive reports of parasites, but it was soon recognized that diseases such as avian cholera, renal coccidiosis, and intestinal infections with acanthocephalans were causes of mortality in wild populations. More recently, adenoviruses, reoviruses, and the newly emergent Wellfleet Bay virus, for example, also have been linked to die-offs of sea ducks. Declining populations of animals are particularly vulnerable to the threats posed by disease and it is important that we improve our understanding of the significance of disease in sea ducks. To conclude, we offer our recommendations for future directions in this field.

Book chapter↗
USGS2016

Evolution of viral virulence: empirical studies

The concept of virulence as a pathogen trait that can evolve in response to selection has led to a large body of virulence evolution theory developed in the 1980-1990s. Various aspects of this theory predict increased or decreased virulence in response to a complex array of selection pressures including mode of transmission, changes in host, mixed infection, vector-borne transmission, environmental changes, host vaccination, host resistance, and co-evolution of virus and host. A fundamental concept is prediction of trade-offs between the costs and benefits associated with higher virulence, leading to selection of optimal virulence levels. Through a combination of observational and experimental studies, including experimental evolution of viruses during serial passage, many of these predictions have now been explored in systems ranging from bacteriophage to viruses of plants, invertebrates, and vertebrate hosts. This chapter summarizes empirical studies of viral virulence evolution in numerous diverse systems, including the classic models myxomavirus in rabbits, Marek's disease virus in chickens, and HIV in humans. Collectively these studies support some aspects of virulence evolution theory, suggest modifications for other aspects, and show that predictions may apply in some virus:host interactions but not in others. Finally, we consider how virulence evolution theory applies to disease management in the field.

Book chapter↗