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Pesticides and pesticide degradates in groundwater used for public supply across the United States: Occurrence and human-health context

This is the first assessment of groundwater from public-supply wells across the United States to analyze for >100 pesticide degradates and to provide human-health context for degradates without benchmarks. Samples from 1204 wells in aquifers representing 70% of the volume pumped for drinking supply were analyzed for 109 pesticides (active ingredients) and 116 degradates. Among the 41% of wells where pesticide compounds were detected, nearly two-thirds contained compound mixtures and three-quarters contained degradates. Atrazine, hexazinone, prometon, tebuthiuron, four atrazine degradates, and one metolachlor degradate were each detected in >5% of wells. Detection frequencies were largest for aquifers with more shallow, unconfined wells producing modern-age groundwater. To screen for potential human-health concerns, benchmark quotients (BQs) were calculated by dividing concentrations by the human-health benchmark, when available. For degradates without benchmarks, estimated values (estimated benchmark quotients (BQE)) were first calculated by assuming equimolar toxicity to the most toxic parent; final analysis excluded degradates with likely overestimated toxicity. Six pesticide compounds and 1.6% of wells had concentrations approaching levels of potential concern (individual or summed BQ or BQE values >0.1), and none exceeded these levels (values >1). Therefore, although pesticide compounds occurred frequently, concentrations were low, even accounting for mixtures and degradates without benchmarks.

Continental United States↗

Bat Rabies and Other Lyssavirus Infections

Bat Rabies and Other Lyssavirus Infections offers readers an overview of the virus variants that cause bat rabies, and geographical patterns in occurrence of this disease. The section Species Susceptibility describes infection rates and trends among bats, humans, and other animals. Disease Ecology considers the biological and environmental dynamics of the disease in various species of bats. Points to Ponder: Interspecies Interactions in Potential Bat Rabies Transmission Settings discusses the narrowing interface of bat colonies and human society and how humans and domestic animals play a role in transmission of bat rabies. Disease Prevention and Control outlines how to limit exposure to rabid bats and other animals. Appendixes include extensive tables of reported infections in bat species and in humans, and a glossary of technical terms is included. The author, Denny G. Constantine, helped define rabies infection in insect-eating bats and has investigated bat rabies ecology for more than half a century. He has authored more than 90 papers during the course of his career and is widely considered to be the world's foremost authority on the disease. Currently, Dr. Constantine is a public health officer emeritus and veterinary epidemiologist for the California Department of Health Services Viral and Rickettsial Disease Laboratory. Milt Friend, first director of the USGS National Wildlife Health Center, wrote the foreword. David Blehert, a USGS microbiologist who is investigating the emergence and causes of bat white-nose syndrome, edited the volume. Bat Rabies is intended for scholars and the general public. Dr. Constantine presents the material in a simple, straightforward manner that serves both audiences. The goal of the author is to increase people's understanding of both bat and disease ecology and also provide a balanced perspective on human risks pertaining to bat rabies.

Circular↗

USGS research on Florida's isolated freshwater wetlands

The U.S. Geological Survey (USGS) has studied wetland hydrology and its effects on wetland health and ecology in Florida since the 1990s. USGS wetland studies in Florida and other parts of the Nation provide resource managers with tools to assess current conditions and regional trends in wetland resources. Wetland hydrologists in the USGS Florida Water Science Center (FLWSC) have completed a number of interdisciplinary studies assessing the hydrology, ecology, and water quality of wetlands. These studies have expanded the understanding of wetland hydrology, ecology, and related processes including: (1) the effects of cyclical changes in rainfall and the influence of evapotranspiration; (2) surface-water flow, infiltration, groundwater movement, and groundwater and surfacewater interactions; (3) the effects of water quality and soil type; (4) the unique biogeochemical components of wetlands required to maintain ecosystem functions; (5) the effects of land use and other human activities; (6) the influences of algae, plants, and invertebrates on environmental processes; and (7) the effects of seasonal variations in animal communities that inhabit or visit Florida wetlands and how wetland function responds to changes in the plant community.

Florida↗

Surface-water-quality conditions and relation to taste-and-odor occurrences in the Lake Olathe Watershed, Northeast Kansas, 2000-02

Surface water in the Lake Olathe watershed, located in northeast Kansas, was sampled from June 2000 through December 2002 to characterize water-quality conditions in relation to physical properties, major ions, sediment, nutrients, selected trace elements, selected pesticides, fecal indicator bacteria, phytoplankton, and taste-and-odor compounds. In addition, two continuous real-time water-quality monitors were operated?one in Cedar Creek at Highway 56, the main tributary to Lake Olathe, and one in Lake Olathe, a supplemental domestic water supply and recreational resource for the city of Olathe. Median concentrations of dissolved and total forms of nitrogen and phosphorus in samples from Cedar Creek were larger than in samples from Lake Olathe, indicating that nutrients in the watershed were transported to Lake Olathe by Cedar Creek from June 2000 through December 2002. Increased concentrations of total phosphorus in samples from the hypolimnion of Lake Olathe compared to the epilimnion indicated that release of total phosphorus from bottom sediments occurred in the lake. Of the 50 pesticides analyzed in water samples from Cedar Creek and Lake Olathe, 10 pesticides were detected at concentrations greater than 0.01 microgram per liter in samples from Cedar Creek, and 9 pesticides were detected at concentrations greater than 0.01 microgram per liter in Lake Olathe, including four herbicides with concentrations exceeding 1.0 microgram per liter. Atrazine was detected at larger concentrations than any other pesticide in samples from both Cedar Creek and Lake Olathe during 2001 and 2002. Concentrations did not exceed the U.S. Environmental Protection Agency drinking-water annual average criterion of 3.0 micrograms per liter; however, concentrations in single samples were larger than 3.0 micrograms per liter. Regression analysis was used to assist in the estimation of sediment and chemical loads and yields. The estimated mean orthophosphate load for 2001 and 2002 represented 29 percent of the total phosphorus load to Lake Olathe. Estimated yields to Lake Olathe of both total nitrogen and total phosphorus, 13.0 and 1.1 pounds per acre per year, respectively, were consistent with mixed agricultural land use occurring in the watershed. Concentrations of fecal coliform bacteria samples from Lake Olathe were less than both primary and secondary single-sample criteria for recreational water in Kansas in place at the time of sampling. Sufficient samples were not collected to compare to the December 2003 Kansas Department of Health and Environment criteria, but single-sample Escherichia coli samples collected from Cedar Creek during storm runoff exceeded 2,000 colonies per 100 milliliters of water (former secondary recreation water-quality criterion for fecal coliform bacteria) in four of the seven samples collected. Water from Cedar Creek and Lake Olathe was analyzed in 2002 by enzyme-linked immunosorbent assay for microcystin-LR, a toxic algal compound. Concentrations of microcystin-LR in Lake Olathe during 2002 ranged from less than 0.1 to 0.41 microgram per liter, which is not considered a significant health risk according to guidelines published by the World Health Organization. Regression models were developed for four taste-and-odor phytoplankton species detected frequently in Lake Olathe? Melosira granulata, Anabaena, Oscillatoria, and Cryptomonas. The coefficient of determinations, R2, ranged from 0.64 to 0.89, and p-values ranged from less than 0.001 to 0.014, indicating a statistically significant relation with lake-residence time, specific conductance, turbidity, Secchi transparency depth, real-time continuous fluorescence, and total ammonia plus organic nitrogen as nitrogen. Actinomycetes, filamentous bacteria that are known producers of geosmin and 2-methylisoborneol (MIB), were sampled and analyzed in 2002 in water from Cedar Creek and Lake Olathe. In Lake Olathe, actinomycetes concentrations rang

Scientific Investigations Report↗

Hind limb malformations in free-living northern leopard frogs (Rana pipiens) from Maine, Minnesota, and Vermont suggest multiple etiologies

Background Reports of malformed frogs have increased throughout the North American continent in recent years. Most of the observed malformations have involved the hind limbs. The goal of this study was to accurately characterize the hind limb malformations in wild frogs as an important step toward understanding the possible etiologies. Methods During 1997 and 1998, 182 recently metamorphosed northern leopard frogs (Rana pipiens) were collected from Minnesota, Vermont, and Maine. Malformed hind limbs were present in 157 (86%) of these frogs, which underwent necropsy and radiographic evaluation at the National Wildlife Health Center. These malformations are described in detail and classified into four major categories: (1) no limb (amelia); (2) multiple limbs or limb elements (polymelia, polydactyly, polyphalangy); (3) reduced limb segments or elements (phocomelia, ectromelia, ectrodactyly, and brachydactyly; and (4) distally complete but malformed limb (bone rotations, bridging, skin webbing, and micromelia). Results Amelia and reduced segments and/or elements were the most common finding. Frogs with bilateral hind limb malformations were not common, and in only eight of these 22 frogs were the malformations symmetrical. Malformations of a given type tended to occur in frogs collected from the same site, but the types of malformations varied widely among all three states, and between study sites within Minnesota. Conclusions Clustering of malformation type suggests that developmental events may produce a variety of phenotypes depending on the timing, sequence, and severity of the environmental insult. Hind limb malformations in free-living frogs transcend current mechanistic explanations of tetrapod limb development.

Maine, Minnesota, Vermont↗

Quantifying the visual-sensory landscape qualities that contribute to cultural ecosystem services using social media and LiDAR

Landscapes are increasingly recognized for providing valuable cultural ecosystem services with numer- ous non-material benefits by serving as places of rest, relaxation, and inspiration that ultimately improve overall mental health and physical well-being. Maintaining and enhancing these valuable benefits through targeted management and conservation measures requires understanding the spatial and tem- poral determinants of perceived landscape values. Content contributed through mobile technologies and the web are emerging globally, providing a promising data source for localizing and assessing these land- scape benefits. These georeferenced data offer rich in situ qualitative information through photos and comments that capture valued and special locations across large geographic areas. We present a novel method for mapping and modeling landscape values and perceptions that leverages viewshed analysis of georeferenced social media data. Using a high resolution LiDAR (Light Detection and Ranging) derived digital surface model, we are able to evaluate landscape characteristics associated with the visual- sensory qualities of outdoor recreationalists. Our results show the importance of historical monuments and attractions in addition to specific environmental features which are appreciated by the public. Evaluation of photo-image content highlights the opportunity of including temporally and spatially vari- able visual-sensory qualities in cultural ecosystem services (CES) evaluation like the sights, sounds and smells of wildlife and weather phenomena.

North Carolina↗

PCB concentrations in Pere Marquette River and Muskegon River watersheds, 2002

Polychlorinated biphenyl compounds (PCBs) are a class of209 individual compounds (known as congeners) for which there are no known natural sources. PCBs are carcinogenic and bioaccumulative compounds. For over 40 years, PCBs were manufactured in the United States. The flame resistant property of PCBs made them ideal chemicals for use as flame-retardants, and as coolants and lubricants in transformers and other electrical equipment. PCBs were also used in heating coils, carbonless paper, degreasers, varnishes, lacquers, waterproofing material, and cereal boxes. In addition, they were frequently used in the manufacturing of plastics, adhesives, and paints. During the manufacturing period of PCBs, these chemicals entered the environment though atmospheric release during manufacturing and burning of PCB products, leaks and spills, and improper disposal. Although PCB manufacturing was banned over 20 years ago, PCBs still enter the environment from hazardous waste sites, improper disposals of PCB-containing products, weathering of asphalt and other substances containing PCBs, burning of PCB containing products, leakage from old equipment, leaching from landfills, and release from contaminated sediments. PCBs do not readily break down in the environment, thus remain there for long periods of time. A small amount may remain dissolved in water but most adhere to organic particles and bottom sediments. In sufficient concentrations, PCBs affect human, wildlife, and aquatic health. PCBs accumulate in fatty tissues of animals and fish and are passed on to those that eat them. PCBs are animal teratogens and potentially carcinogenic. They can cause death of animals, fish, and birds; death or low growth rate of plants; shortened lifespan; reproductive problems; and lower fertility. Women who are exposed to high levels of PCBs may have babies with slightly lower birth weights and transfer the PCBs through the breast milk, which may affect the immune system and motor development of the child. Rule 323.1057 (Toxic Substances) of the Part 4. Water Quality Standards gives procedure for calculating water-quality values to protect human, wildlife and aquatic life. For total PCB, the applicable Rule 57 water-quality value is the human cancer value (HCV=0.26 ng/L), In 2002, U. S. Geological Survey (USGS) and Michigan Department of Environmental Quality (MDEQ) cooperatively planned and executed a monitoring program for PCBs in water and sediment from the Pere Marquette River and Muskegon River watersheds. The Pere Marquette and Muskegon River are in the west central part of Michigan's Lower Peninsula (fig. 1). The Pere Marquette River watershed is about 750 square miles, and the Muskegon River is about 2700 square miles. Both rivers are popular recreational waters, and the Pere Marquette River is a Michigan designated Natural River (Part 305 of the Natural Rivers and Environmental Protection Act 451 of 1994).

Michigan↗

DNA virome composition of two sympatric wild felids, bobcat (Lynx rufus) and puma (Puma concolor) in Sonora, Mexico

With viruses often having devastating effects on wildlife population fitness and wild mammals serving as pathogen reservoirs for potentially zoonotic diseases, determining the viral diversity present in wild mammals is both a conservation and One Health priority. Additionally, transmission from more abundant hosts could increase the extinction risk of threatened sympatric species. We leveraged an existing circular DNA enriched metagenomic dataset generated from bobcat ( Lynx rufus , n = 9) and puma ( Puma concolor , n = 13) scat samples non-invasively collected from Sonora, Mexico, to characterize fecal DNA viromes of each species and determine the extent that viruses are shared between them. Using the metaWRAP pipeline to co-assemble viral genomes for comparative metagenomic analysis, we observed diverse circular DNA viruses in both species, including circoviruses, genomoviruses, and anelloviruses. We found that differences in DNA virome composition were partly attributed to host species, although there was overlap between viruses in bobcats and pumas. Pumas exhibited greater levels of alpha diversity, possibly due to bioaccumulation of pathogens in apex predators. Shared viral taxa may reflect dietary overlap, shared environmental resources, or transmission through host interactions, although we cannot rule out species-specific host-virus coevolution for the taxa detected through co-assembly. However, our detection of integrated feline foamy virus (FFV) suggests Sonoran pumas may interact with domestic cats. Our results contribute to the growing baseline knowledge of wild felid viral diversity. Future research including samples from additional sources (e.g., prey items, tissues) may help to clarify host associations and determine the pathogenicity of detected viruses.

Sonora↗

A case for using Plethodontid salamanders for monitoring biodiversity and ecosystem integrity of North American forests

Terrestrial salamanders of the family Plethodontidae have unique attributes that make them excellent indicators of biodiversity and ecosystem integrity in forested habitats. Their longevity, small territory size, site fidelity, sensitivity to natural and anthropogenic perturbations, tendency to occur in high densities, and low sampling costs mean that counts of plethodontid salamanders provide numerous advantages over counts of other North American forest organisms for indicating environmental change. Furthermore, they are tightly linked physiologically to microclimatic and successional processes that influence the distribution and abundance of numerous other hydrophilic but difficult-to-study forest-dwelling plants and animals. Ecosystem processes such as moisture cycling, food-web dynamics, and succession, with their related structural and microclimatic variability, all affect forest biodiversity and have been shown to affect salamander populations as well. We determined the variability associated with sampling for plethodontid salamanders by estimating the coefficient of variation (CV ) from available time-series data. The median coefficient of variation indicated that variation in counts of individuals among studies was much lower in plethodontids (27%) than in lepidoptera (93%), passerine birds (57%), small mammals (69%), or other amphibians (37–46%), which means plethodontid salamanders provide an important statistical advantage over other species for monitoring long-term forest health.

Conservation Biology↗

Biomonitoring of Environmental Status and Trends (BEST) Program: Environmental contaminants and their effects on fish in the Columbia River Basin

This project examined and analyzed 560 fish representing eight species from 16 sites in the Columbia River Basin (CRB) from September 1997 to April 1998. Ten of the 16 sampling locations were historical National Contaminant Biomonitoring Program (NCBP) sites where organochlorine and elemental contaminants in fish had been monitored from 1969 through 1986. Five sites were co-located at U.S. Geological Survey (USGS)-National Stream Quality Accounting Network (NASQAN) stations at which water quality is monitored. The sampling location at Marine Park in Vancouver, Washington did not correspond to either of the established monitoring programs. Eight of the sampling locations were located on the Columbia River; three were on the Snake River; two were on the Willamette River, and one site was on each of the Yakima, Salmon and Flathead Rivers. Common carp ( Cyprinus carpio ), black basses ( Micropterus sp. ), and largescale sucker ( Catostomus macrocheilus ) together accounted for 80% of the fish sampled during the study. Fish were weighed and measured then field-examined for external and internal lesions, and liver, spleen, and gonads were weighed to compute somatic indices. Selected tissues and fluids were obtained and preserved for analysis of fish health and reproductive biomarkers. Composite samples of whole fish from each station were grouped by species and gender and analyzed for persistent organic and inorganic contaminants and for dioxin-like activity using H4IIE rat hepatoma cell bioassay.

Columbia River Basin↗

Emissions from coal fires and their impact on the environment

Self-ignited, naturally occurring coal fires and fires resulting from human activities persist for decades in underground coal mines, coal waste piles, and unmined coal beds. These uncontrolled coal fires occur in all coal-bearing parts of the world (Stracher, 2007) and pose multiple threats to the global environment because they emit greenhouse gases - carbon dioxide (CO 2 ), and methane (CH 4 ) - as well as mercury (Hg), carbon monoxide (CO), and other toxic substances (fig. 1). The contribution of coal fires to the global pool of atmospheric CO 2 is little known but potentially significant. For China, the world's largest coal producer, it is estimated that anywhere between 10 million and 200 million metric tons (Mt) of coal reserves (about 0.5 to 10 percent of production) is consumed annually by coal fires or made inaccessible owing to fires that hinder mining operations (Rosema and others, 1999; Voigt and others, 2004). At this proportion of production, coal amounts lost to coal fires worldwide would be two to three times that for China. Assuming this coal has mercury concentrations similar to those in U.S. coals, a preliminary estimate of annual Hg emissions from coal fires worldwide is comparable in magnitude to the 48 tons of annual Hg emissions from all U.S. coal-fired power-generating stations combined (U.S. Environmental Protection Agency, 2002). In the United States, the combined cost of coal-fire remediation projects, completed, budgeted, or projected by the U.S. Department of the Interior's Office of Surface Mining Reclamation and Enforcement (OSM), exceeds $1 billion, with about 90% of that in two States - Pennsylvania and West Virginia (Office of Surface Mining Enforcement and Reclamation, 2008; fig. 2). Altogether, 15 States have combined cumulative OSM coal-fire project costs exceeding $1 million, with the greatest overall expense occurring in States where underground coal fires are predominant over surface fires, reflecting the greater cost of extinguishing underground fires (fig. 2) (see 'Controlling Coal Fires'). In this fact sheet we review how coal fires occur, how they can be detected by airborne and remote surveys, and, most importantly, the impact coal-fire emissions may have on the environment and human health. In addition, we describe recent efforts by the U.S. Geological Survey (USGS) and collaborators to measure fluxes of CO 2 , CO, CH 4 , and Hg, using groundbased portable detectors, and combining these approaches with airborne thermal imaging and CO 2 measurements. The goal of this research is to develop approaches that can be extrapolated to large fires and to extrapolate results for individual fires in order to estimate the contribution of coal fires as a category of global emissions.

Fact Sheet↗

Contaminant Hazard Reviews (compilation)

This compact disc (CD) contains the 35 reports in the Contaminant Hazard Reviews (CHR) that were published originally between 1985 and 1999 in the U.S. Department of the Interior Biological Report series. The CD was produced because printed supplies of these reviews--a total of 105,000--became exhausted and demand remained high. Each review was prepared at the request of environmental specialists of the U.S. Fish and Wildlife Service and each contained specific information on the following: mirex, cadmium, carbofuran, toxaphene, selenium, chromium, polychlorinated biphenyls, dioxins, diazinon, mercury, polycyclic aromatic hydrocarbons, arsenic, chlorpyrifos, lead, tin, index issue, pentachlorophenol, atrazine, molybdenum, boron, chlordane, paraquat, cyanide, fenvalerate, diflubenzuron, zinc, famphur, acrolein, radiation, sodium monofluoroacetate, planar PCBs, silver, copper, nickel, and a cumulative index to chemicals and species. Each report reviewed and synthesized the technical literature on a single contaminant and its effects on terrestrial plants and invertebrates, aquatic plants and animals, avian and mammalian wildlife, and other natural resources. The subtopics include contaminant sources and uses; physical, chemical, and metabolic properties; concentrations in field collections of abiotic materials and living organisms; deficiency effects, where appropriate; lethal and sublethal effects, including effects on survival, growth, reproduction, metabolism, mutagenicity, teratogenicity, and carcinogenicity; proposed criteria for the protection of human health and sensitive natural resources; and recommendations for additional research.

Contaminant Hazard Reviews↗

Assessing the vulnerability of human and biological communities to changing ecosystem services using a GIS-based multi-criteria decision support tool

In this paper we describe an application of a GIS-based multi-criteria decision support web tool that models and evaluates relative changes in ecosystem services to policy and land management decisions. The Santa Cruz Watershed Ecosystem Portfolio (SCWEPM) was designed to provide credible forecasts of responses to ecosystem drivers and stressors and to illustrate the role of land use decisions on spatial and temporal distributions of ecosystem services within a binational (U.S. and Mexico) watershed. We present two SCWEPM sub-models that when analyzed together address bidirectional relationships between social and ecological vulnerability and ecosystem services. The first model employs the Modified Socio-Environmental Vulnerability Index (M-SEVI), which assesses community vulnerability using information from U.S. and Mexico censuses on education, access to resources, migratory status, housing situation, and number of dependents. The second, relating land cover change to biodiversity (provisioning services), models changes in the distribution of terrestrial vertebrate habitat based on multitemporal vegetation and land cover maps, wildlife habitat relationships, and changes in land use/land cover patterns. When assessed concurrently, the models exposed some unexpected relationships between vulnerable communities and ecosystem services provisioning. For instance, the most species-rich habitat type in the watershed, Desert Riparian Forest, increased over time in areas occupied by the most vulnerable populations and declined in areas with less vulnerable populations. This type of information can be used to identify ecological conservation and restoration targets that enhance the livelihoods of people in vulnerable communities and promote biodiversity and ecosystem health.

Santa Cruz watershed↗

Impact of hurricanes storm surges on the groundwater resources

Ocean surges onto coastal lowlands caused by tropical and extra tropical storms, tsunamis, and sea level rise affect all coastal lowlands and present a threat to drinking water resources of many coastal residents. In 2005, two such storms, Hurricanes Katrina and Rita struck the Gulf Coast of the US. Since September 2005, water samples have been collected from water wells impacted by the hurricanes' storm surges along the north shore of Lake Pontchartrain in southeastern Louisiana. The private and public water wells tested were submerged by 0.6-4.5 m of surging saltwater for several hours. The wells' casing and/or the associated plumbing were severely damaged. Water samples were collected to determine if storm surge water inundated the well casing and, if so, its effect on water quality within the shallow aquifers of the Southern Hills Aquifer System. In addition, the samples were used to determine if the impact on water quality may have long-term implication for public health. Laboratory testing for several indicator parameters (Ca/Mg, Cl/Si, chloride, boron, specific conductance and bacteria) indicates that surge water entered water wells' casing and the screened aquifer. Analysis of the groundwater shows a decrease in the Ca/Mg ratio right after the storm and then a return toward pre-Katrina values. Chloride concentrations were elevated right after Katrina and Rita, and then decreased downward toward pre-Katrina values. From September 2005 to June 2006, the wells showed improvement in all the saltwater intrusion indicators. ?? 2007 Springer-Verlag.

Environmental Geology↗

Forecasting selenium discharges to the San Francisco Bay-Delta Estuary: Ecological effects of a proposed San Luis Drain extension

Selenium discharges to the San Francisco Bay-Delta Estuary (Bay-Delta) could change significantly if federal and state agencies (1) approve an extension of the San Luis Drain to convey agricultural drainage from the western San Joaquin Valley to the North Bay (Suisun Bay, Carquinez Strait, and San Pablo Bay); (2) allow changes in flow patterns of the lower San Joaquin River and Bay-Delta while using an existing portion of the San Luis Drain to convey agricultural drainage to a tributary of the San Joaquin River; or (3) revise selenium criteria for the protection of aquatic life or issue criteria for the protection of wildlife. Understanding the biotransfer of selenium is essential to evaluating effects of selenium on Bay-Delta ecosystems. Confusion about selenium threats to fish and wildlife stem from (1) monitoring programs that do not address specific protocols necessary for an element that bioaccumulates; and (2) failure to consider the full complexity of the processes that result in selenium toxicity. Past studies show that predators are more at risk from selenium contamination than their prey, making it difficult to use traditional methods to predict risk from environmental concentrations alone. This report presents an approach to conceptualize and model the fate and effects of selenium under various load scenarios from the San Joaquin Valley. For each potential load, progressive forecasts show resulting (1) water-column concentration; (2) speciation; (3) transformation to particulate form; (4) particulate concentration; (5) bioaccumulation by invertebrates; (6) trophic transfer to predators; and (7) effects on those predators. Enough is known to establish a first-order understanding of relevant conditions, biological response, and ecological risks should selenium be discharged directly into the North Bay through a conveyance such as a proposed extension of the San Luis Drain. The approach presented here, the Bay-Delta selenium model, determines the mass, fate, and effects of selenium released to the Bay-Delta through use of (1) historical land-use, drainage, alluvial-fill, and runoff databases; (2) existing knowledge concerning biogeochemical reactions and physiological parameters of selenium (e.g., speciation, partitioning between dissolved and particulate forms, and bivalve assimilation efficiency); and (3) site-specific data mainly from 1986 to 1996 for clams and bottom-feeding fish and birds. Selenium load scenarios consider effluents from North Bay oil refineries and discharges of agricultural drainage from the San Joaquin Valley to enable calculation of (a) a composite freshwater endmember selenium concentration at the head of the estuary; and (b) a selenium concentration at a selected seawater location (Carquinez Strait) as a foundation for modeling. Analysis of selenium effects also takes into account the mode of conveyance for agricultural drainage (i.e., the San Luis Drain or San Joaquin River); and flows of the Sacramento River and San Joaquin River on a seasonal or monthly basis. Load scenarios for San Joaquin Valley mirror predictions made since 1955 of a worsening salt (and by inference, selenium) build-up exacerbated by an arid climate and massive irrigation. The reservoir of selenium in the San Joaquin Valley is sufficient to provide loading at an annual rate of approximately 42,500 pounds of selenium to a Bay-Delta disposal point for 63 to 304 years at the lower range of projections presented here, even if influx of selenium from the California Coast Ranges could be curtailed. Disposal of wastewaters on an annual basis outside of the San Joaquin Valley may slow the degradation of valley resources, but drainage alone cannot alleviate the salt and selenium build-up in the San Joaquin Valley, at least within a century. Load scenarios also show the different proportions of selenium loading to the Bay-Delta. Oil refinery loads from 1986 to 1992 ranged from 8.5 to 20 pounds of selenium per day; with treatment and cleanup, loads decreased to 3.0 pounds of selenium per day in 1999. In contrast, San Joaquin Valley agricultural drainage loads disposed of in a San Luis Drain extension could range from 45 to 117 pounds of selenium per day across a set of historical and future conditions. Components of this valley-wide load include five source subareas (i.e., Grassland, Westlands, Tulare, Kern, and Northern) defined by water and drainage management. Loads vary per subarea mainly because of proximity of the subarea to geologic sources of selenium and irrigation history. Loads from the Sacramento River, depending on flow conditions, range from 0.8 to 10 pounds of selenium per day. Loads from the San Joaquin River vary depending on restoration and flow conditions, which are considered. A consistent picture of ecological risk emerges under modeled selenium discharges from a proposed San Luis Drain extension. The threat to the estuary is greatest during low flow seasons and critically dry years. Where selenium undergoes reactions typical of low flow or longer residence time, highly problematic bioaccumulation in prey (food) is forecast. Surf scoter, greater and lesser scaup, and white sturgeon appear to be most at risk because these Bay-Delta predators feed on deposit and filter-feeding bivalves. Recent findings add Sacramento splittail and Dungeness crab to that list. During the low flow season of critically dry years, forecasted selenium concentrations in water, particulate matter, prey (diet), and predator tissue exceed guidelines with a high certainty of producing adverse effects under the most likely load scenario from a proposed San Luis Drain extension. High flows afford some protection under certain conditions in modeled San Joaquin River scenarios. However, meeting a combined goal of releasing a specific load during maximum flows and keeping selenium concentrations in the river below a certain objective to protect against bioaccumulation may not always be attainable. Management of the San Joaquin River on a constant concentration basis also could create problematic bioaccumulation during a wet year, especially during the low flow season, because high flows translate to high loads that are not always offset by seasonal river inflows. Prior to refinery cleanup, selenium contamination was sufficient to threaten reproduction in key species within the Bay-Delta ecosystems and human health advisories were posted based on selenium concentrations in tissues of diving ducks. During this time, selenium concentrations in the Bay-Delta were well below the most stringent recommended water quality criterion [1 microgram per liter (1 µg/L)]. Enhanced biogeochemical transformations to bioavailable particulate selenium and efficient bioaccumulation by bivalves characterized the system. If these biogeochemical conditions continue to prevail and agricultural selenium sources replace or exceed refinery sources, ecological forecasts suggest the risk of adverse effects will be difficult to eliminate under an out-of-valley resolution to the selenium problem. The Bay-Delta selenium model presented here is a systematic approach for conducting forecasts of the ecological effects from selenium on aquatic food webs. It is a new tool that links and models the major processes leading from loads through consumer organisms to predators. It also is a feasible approach for site-specific analysis and could provide a framework for developing new protective selenium foodweb guidelines and predator criteria. Model components that help ensure understanding ecosystems and the basis of environmental protection are (1) contaminant concentrations and speciation in sources, such as particulate material, that most influence bioavailability; (2) bioaccumulation models that calculate concentrations in diet, specifically in bivalves of the Bay-Delta that act as sensitive indicators of selenium contamination; (3) food-web type that determines what animals are threatened and when; and (4) multiple media concentrations (water, particulate material, and tissue of prey and predators) that, in-combination, determine risk or hazard.

California↗

Mercury concentrations in water and mercury and selenium concentrations in fish from Brownlee Reservoir and selected sites in the Boise and Snake Rivers, Idaho and Oregon, 2013-17

Mercury (Hg) analyses were conducted on samples of water and sport fish collected from selected sampling sites in the Boise and Snake Rivers and Brownlee Reservoir, in Idaho and Oregon, to meet National Pollution Discharge and Elimination System permit requirements for the City of Boise, Idaho, from 2013 to 2017. City of Boise personnel collected water samples from six sites in October and November of 2013, 2015 and 2017, and sampled one site in 2014 and 2016. Total Hg concentrations in unfiltered water samples ranged from 0.41 to 8.78 nanograms per liter (ng/L), with the highest value (8.78 ng/L) observed in Brownlee Reservoir in 2013. All samples were less than the U.S. Environmental Protection Agency aquatic life criterion of 12 ng/L. Individual fillets of mountain whitefish ( Prosopium williamsoni ), rainbow trout ( Oncorhynchus mykiss ), smallmouth bass ( Micropterus dolomieu ), and channel catfish ( Ictalurus punctatus ) were collected and analyzed for Hg. The tissue Hg concentrations were compared with regulatory or advisory values for wet-weight methylmercury in fish tissue. In this report, methylmercury concentrations in fish tissue are considered similar to total Hg in fish muscle tissue and are simply referred to as Hg. The 2013 average Hg concentration for smallmouth bass (0.32 mg/kg) collected at Brownlee Reservoir and for channel catfish (0.33 mg/kg) collected at the Boise River mouth, exceeded the Idaho water quality criterion (>0.3 mg/kg). The 2017 Hg concentrations in smallmouth bass from Brownlee Reservoir (geometric mean of 0.22 mg/kg) was at the Idaho Fish Consumption Advisory Program action level. Selenium (Se) interacts with Hg to reduce the health risks of Hg, such that tissues with Se-to-Hg molar ratios greater than 1 are considered to present less potential health risks for a given Hg concentration than are tissues with lower Se-to-Hg ratios. One composite fish tissue sample per site was analyzed for Se. Selenium-to-Hg molar ratios in the fish tissue samples ranged from 0.99 to 24.7.

Idaho, Oregon↗

Surface-water/ground-water interaction of the Spokane River and the Spokane Valley/Rathdrum Prairie aquifer, Idaho and Washington

Historical mining in the Coeur d’Alene River Basin of northern Idaho has resulted in elevated concentrations of some trace metals (particularly cadmium, lead, and zinc) in water and sediment of Coeur d’Alene Lake and downstream in the Spokane River in Idaho and Washington. These elevated trace-metal concentrations in the Spokane River have raised concerns about potential contamination of ground water in the underlying Spokane Valley/Rathdrum Prairie aquifer, the primary source of drinking water for the city of Spokane and surrounding areas. A study conducted as part of the U.S. Geological Survey’s National Water-Quality Assessment Program examined the interaction of the river and aquifer using hydrologic and chemical data along a losing reach of the Spokane River. The river and ground water were extensively monitored over a range of hydrologic conditions at a streamflow-gaging station and 25 monitoring wells situated from 40 to 3,500 feet from the river. River stage, ground-water levels, water temperature, and specific conductance were measured hourly to biweekly. Water samples were collected on nearly a monthly basis between 1999 and 2001 from the Spokane River and were collected up to nine times between June 2000 and August 2001 from the monitoring wells. Hydrologic and chemical data indicate that the Spokane River recharges the Spokane Valley/ Rathdrum Prairie aquifer along a 17-mile reach between Post Falls, Idaho, and Spokane, Washington. Ground-water levels in the near-river aquifer (less than 300 feet from the river) indicate variably saturated conditions below the river and a ground-water flow gradient away from the losing reach of the river. Calculated monthly mean losses, during water years 2000 and 2001 along a nearly 7-mile reach between two gages, ranged from near 69 to 810 cubic feet per second. Losses generally increased with increased streamflow. However, late summer warm water temperatures also appear to be a factor as losses increased due to lower viscosity as water temperatures increased. Chemical data indicated that river recharge may influence ground-water chemistry as far as 3,000 feet from the river, but ground water within a few hundred feet of the river is most affected. Major-ion concentrations, stable isotopes, and temperature of the river and ground water from near-river wells were similar and exhibited similar temporal trends, whereas ground water from wells located farther from the river generally had higher major-ion concentrations and more stable temperatures and chemistry. Although trace-element concentrations sometimes exceeded aquatic-life criteria in the water of the Spokane River and were elevated above national median values in the bed sediment, trace-element concentrations of all river and ground-water samples were at levels less than U.S. Environmental Protection Agency drinking-water standards. The Spokane River appears to be a source of cadmium, copper, zinc, and possibly lead in the near-river ground water. Dissolved cadmium, copper, and lead concentrations generally were less than 1 microgram per liter (µg/L) in the river water and ground water. During water year 2001, dissolved zinc concentrations were similar in water from near-river wells (17-71 µg/L) and the river water (22-66 µg/L), but were less than detection levels in wells farther from the river. Arsenic, found to be elevated in ground water in parts of the aquifer, does not appear to have a river source. Although the river does influence the ground-water chemistry in proximity to the river, it does not appear to adversely affect the ground-water quality to a level of human-health concern.

Idaho;Washington↗

Highlighting the complexities of a groundwater pilot study during an avian influenza outbreak: Methods, lessons learned, and select contaminant results

The highly pathogenic avian influenza (H5N2) outbreak in the Midwestern United States (US) in 2015 was historic due to the number of birds and poultry operations impacted and the corresponding economic loss to the poultry industry and was the largest animal health emergency in US history. The U.S. Geological Survey (USGS), with the assistance of several state and federal agencies, aided the response to the outbreak by developing a study to determine the extent of virus transport in the environment. The study goals were to: develop the appropriate sampling methods and protocols for measuring avian influenza virus (AIV) in groundwater, provide the first baseline data on AIV and outbreak- and poultry-related contaminant occurrence and movement into groundwater, and document climatological factors that may have affected both survival and transport of AIV to groundwater during the months of the 2015 outbreak. While site selection was expedient, there were often delays in sample response times due to both relationship building between agencies, groups, and producers and logistical time constraints. This study's design and sampling process highlights the unpredictable nature of disease outbreaks and the corresponding difficulty in environmental sampling of such events. The lessons learned, including field protocols and approaches, can be used to improve future research on AIV in the environment.

Iowa↗