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Don’t Let Negatives Hold You Back: Accounting for Underlying Physics and Natural Distributions of Hydrothermal Systems When Selecting Negative Training Sites Leads to Better Machine Learning Predictions

Selecting negative training sites is an important challenge to resolve when utilizing machine learning (ML) for predicting hydrothermal resource favorability because ideal models would discriminate between hydrothermal systems (positives) and all types of locations without hydrothermal systems (negatives). The Nevada Machine Learning project (NVML) fit an artificial neural network to identify areas favorable for hydrothermal systems by selecting 62 negative sites where the research team had confidence that no hydrothermal resource exists. Herein, we compare the implications of the expert selection of negatives (i.e., the NVML strategy) with a random sample strategy, where it is assumed that areas outside the favorable structural ellipses defined by NVML are negative. Because hydrothermal systems are sparse, it is highly probable that, in the absence of a favorable geological structure, hydrothermal favorability is low. We compare three training strategies: 1) the positive and negative labeled examples from NVML; 2) the positive examples from NVML with randomly selected negatives in equal frequency as NVML; and 3) the positive examples from NVML with randomly selected negatives reflecting the expected natural distribution of hydrothermal systems relative to the total area. We apply these training strategies to the NVML feature data (input data) using two ML algorithms (XGBoost and logistic regression) to create six favorability maps for hydrothermal resources. When accounting for the expected natural distribution of hydrothermal systems, we find that XGBoost performs better than the NVML neural network and its negatives. Model validation was less reliable using F1 scores, a common performance metric, than comparing probability estimates at known positives, likely because of the extreme natural class imbalance and the lack of negatively labeled sites. This work demonstrates that expert selection of negatives for training in NVML likely imparted modeling bias. Accounting for the sparsity of hydrothermal systems and all the types of locations without hydrothermal systems allows us to create better models for predicting hydrothermal resource favorability.

Geothermal Resources Council Transactions

Tectonically driven integration of the 4.8 Ma Colorado River USA tracked with detrital sanidine and fish genetics

The development of the continental-scale Colorado River system, western USA, from 8 to 4.8 Ma, is revealed using 60-40 Ma detrital sanidine tracer grains and fish phylogeny. Here we show that precursor paleoriver segments became integrated north to south as traced by 60-40 Ma sand grains that were derived from the north and sequentially appeared in the 25-8 Ma Browns Park Formation of Utah, 7-6 Ma upper Bidahochi Formation of Arizona, and 4.8 Ma Bouse Formation of the lower Colorado River and proto Gulf of California. This timing is mimicked by molecular clock estimates of divergence times among fish lineages. River integration was a response to headwater uplifts in the Yellowstone hotspot track and Rocky Mountains. 40 Ar/ 39 Ar ages refine the timing for mantle-drips that caused subsidence, then uplift, of depositional basins that influenced the integration pathway and tempo. The ~ 3-million-year timescale suggests that multiscale mantle-driven uplift, rather than lake spillover, was the primary driver for integration of the proto-Colorado River through Grand Canyon.

Colorado River

Biogeochemical and community ecology responses to the wetting of non-perennial streams

Transitions between dry and wet hydrologic states are the defining characteristic of non-perennial rivers and streams, which constitute the majority of the global river network. Although past work has focused on stream drying characteristics, there has been less focus on how hydrology, ecology and biogeochemistry respond and interact during stream wetting. Wetting mechanisms are highly variable and can range from dramatic floods and debris flows to gradual saturation by upwelling groundwater. This variation in wetting affects ecological and biogeochemical functions, including nutrient processing, sediment transport and the assembly of biotic communities. Here we synthesize evidence describing the hydrological mechanisms underpinning different types of wetting regimes, the associated biogeochemical and organismal responses, and the potential scientific and management implications for downstream ecosystems. This combined multidisciplinary understanding of wetting dynamics in non-perennial streams will be key to predicting and managing for the effects of climate change on non-perennial ecosystems.

Nature Water

Overview of the Cenozoic geology of the northern Harrat Rahat volcanic field, Kingdom of Saudi Arabia

The Harrat Rahat volcanic field, located in the west-central part of the Kingdom of Saudi Arabia, is one of the larger Cenozoic harrats among the more than 17 harrats situated upon the Arabia Plate. The map plate contained herein shows, at a scale of 1:100,000, the mapped volcanic geology of northern Harrat Rahat, which consists of the northernmost one-fifth of Harrat Rahat. Northern Harrat Rahat has an area of about 3,340 square kilometers (km 2 ), of which 2,567 km 2 is covered by Harrat Rahat volcanic rocks and deposits, and it encompasses more than 900 exposed vents (that is, craters, cryptodomes, maars, and scoria cones), 289 of which are isolated by younger volcanic deposits and have not been correlated with the 234 volcanic rock units distinguished by geologic mapping. Northern Harrat Rahat is of special interest owing to its proximity to the city of Al Madinah al Munawwarah, which sits within, and is continuing to expand southward over, the north end of the volcanic field. Al Madinah is home to an expanding population, currently at more than 2 million residents, together with the intermittent addition of approximately 3 million pilgrims during Hajj and Umrah (religious visitations). The center of Al Madinah is less than 8 km from lava flows of the only confirmed historically documented eruption, which occurred in 1256 C.E. (654 A.H.). Earlier prehistoric lava flows also encroached into the area of the present-day city limits, as demonstrated by volcanic rocks exposed widely throughout the city in roadcuts, parks, and excavations for new buildings, although no evidence has been found of any other than the 1256 C.E. lava having reached that area during times of human habitation. Geologic mapping was undertaken by the U.S. Geological Survey in collaboration with the Saudi Geological Survey. The features of primary interest within the map area are scoria cones, lava flows, lava domes, craters, and pyroclastic deposits from the Quaternary, which have compositions of basalt, hawaiite, mugearite, benmoreite, and trachyte. The geologic mapping was published by Downs and others (2019) on a single sheet at 1:75,000 scale and two detailed sheets at 1:25,000 scale, accompanied by detailed explanations of the geology. This report presents the geology on a single sheet at 1:100,000 scale and provides condensed geologic explanations for the convenience of readers of this volume. Some minor errors of nomenclature and lava source regions that do not change fundamental interpretations have been corrected herein.

Professional Paper

The U.S. Geological Survey National Water Quality Network—Groundwater, 2024

The U.S. Geological Survey (USGS) operates a National Water Quality Network (NWQN) to monitor trends in groundwater quality and assess emerging contaminants of concern. It is a “network of networks” with 81 subnetworks being sampled on a decadal time scale. Each year, 8 of the subnetworks are sampled. Subnetworks have 20–30 wells each and include studies of domestic supply wells or shallow groundwater (20–50 feet deep) underlying urban land use or agricultural land use. Currently there are 2,089 wells in the network. All wells are sampled for physical properties, nutrients, major ions, trace elements, per- and polyfluoroalkyl substances (PFAS), and a subset of wells are sampled for pesticides, volatile organic compounds, radionuclides, and microbiological contaminants.

Contiguous United States

New 10Be-26Al isochron burial dating informs the Pliocene and Pleistocene evolution of the lower Colorado River, southwestern United States

Four new 10 Be- 26 Al isochron burial ages ranging from 4.4 to 2 Ma on ancestral Colorado River deposits in the lower Colorado River corridor (LCRC) help constrain the river’s evolution during the Pliocene and early Pleistocene. They help fill a gap between previous work that focused on older and younger deposits: Older dated deposits include the 5 Ma Bouse Formation, which records the integration of the Colorado River through a series of preexisting basins to the Gulf of California and the ca. 4.5 - 3.5 Ma Bullhead Alluvium, a 200 to 300 m thick aggregational package that immediately followed integration. The much younger, 100 - 70 ka, Chemehuevi Formation is another major aggradation package mapped throughout the LCRC. The new burial ages on the facies of Santa Fe Railway (4.37 ± 0.71 Ma), boulder conglomerate of Bat Cave Wash (2.12 ± 0.26 and 2.05 ± 0.31 Ma), and the Palo Verde alluvium (3.03 ± 0.26 Ma) partially fill in a 3.5 M.y. gap between the deposition of the Bullhead Alluvium and the Chemeheuvi Formation and document the timescales over which the Colorado River was able to remove the Bullhead aggradational package and initiate newer and smaller aggradational pulses.

Arizona, California, Nevada

Borehole geophysical time-series logging to monitor passive ISCO treatment of residual chlorinated-ethenes in a confining bed, NAS Pensacola, Florida

In-situ chemical oxidation (ISCO) is a common method to remediate chlorinated ethene contaminants in groundwater. Monitoring the effectiveness of ISCO can be hindered because of insufficient observations to assess oxidant delivery. Advantageously, potassium permanganate, one type of oxidant, provides the opportunity to use its strong electrical signal as a surrogate to track oxidant delivery using time-series borehole geophysical methods, like electromagnetic (EM) induction logging. Here we report a passive ISCO (P-ISCO) experiment, using potassium permanganate cylinders emplaced in boreholes, at a chlorinated ethene contamination site, Naval Air Station Pensacola, Florida. The contaminants are found primarily at the base of a shallow sandy aquifer in contact with an underlying silty-clay confining bed. We used results of the time-series borehole logging collected between 2017 and 2022 in 4 monitoring wells to track oxidant delivery. The EM-induction logs from the monitoring wells showed an increase in EM response primarily along the contact, likely from pooling of the oxidant, during P-ISCO treatment in 2021. Interestingly, concurrent natural gamma-ray (NGR) logging showed a decrease in NGR response at 3 of the 4 wells possibly from the formation of manganese precipitates coating sediments. The coupling of time-series logging and well-chemistry data allowed for an improved assessment of passive ISCO treatment effectiveness.

Florida

A robust quantitative method to distinguish runoff-generated debris flows from floods

Debris flows and floods generated by rainfall runoff occur in rocky mountainous landscapes and burned steeplands. Flow type is commonly identified post-event through interpretation of depositional structures, but these may be poorly preserved or misinterpreted. Prior research indicates that discharge magnitude is commonly amplified in debris flows relative to floods due to volumetric bulking and increased frictional resistance. Here, we use this flow amplification to develop a metric ( Q* ) to separate debris flows from floods based on the ratio of observed peak discharge to the theoretical maximum water discharge from rainfall runoff. We compile 642 observations of floods and debris flows and demonstrate that Q* distinguishes flow type to ∼92% accuracy. Q* allows for accurate identification of debris flows through simple channel cross-section surveys rather than through qualitative interpretation of deposits, and therefore should increase the performance of models and engineered structures that require accurate flow-type observations.

Geophysical Research Letters

SURF: An automated method for building nonplanar 3D fault models from earthquake hypocenters

Accurately characterizing 3D fault geometry is vital for improving our understanding of earthquake behavior and informing the development of seismic hazard models. Despite their importance, subsurface fault structures tend to be poorly constrained because of limitations in observational data. Improvements to the seismic networks and earthquake detection algorithms have increased the precision and volume of earthquake catalogs, which help illuminate detailed subsurface fault structure and provide the most direct information available about fault geometries at depth. We present a Python package to automate generating 3D fault geometries directly from hypocentral seismicity patterns. This method begins with clustering events based on their spatial density, identifying coherent patterns. Nearby clusters are then merged based on the similarity of their orientations. We fit nonplanar surfaces using support vector regression to balance surface accuracy with minimal deviations from planarity. The fault models are output as quadrilateral meshes at user‐defined resolution. In the process of generating the 3D fault surfaces, we compute the spatial density of seismicity around the surface and the planarity as quantitative metrics of the model outputs. As a proof of concept, we apply this approach to the San Andreas–Calaveras fault junction region and the 2019 Ridgecrest earthquake sequence, both in California, which contain complex subparallel faults well defined at the Earth’s surface and abundant microseismicity. These case studies demonstrate the method’s ability to model complex fault structures, including long continuous fault surfaces, crossing faults, variably dipping segments, and subparallel faults. We test the method on both standard network catalogs and double‐difference relocated catalogs. We find that our seismicity‐based fault model results align with published 3D models that incorporate additional constraints and interpretations ( Plesch et al. , 2020 ; Aagaard and Hirakawa, 2021 ). This workflow provides a low‐user‐input solution for estimating fault geometries at depth from earthquake catalogs.

California

Drone-based radiometric surveys provide high-resolution mine waste characterization

Airborne radiometric surveys use passive geophysical techniques to characterize geochemical variations at or near earth’s surface. These methods have been used for a variety of mapping applications, including mineral resource evaluation. However, detailed characterization of smaller geologic targets, including mine waste features, requires flying at lower altitudes and with tighter line spacing than is feasible with traditional aircraft. Here, a small uncrewed aircraft system (sUAS) equipped with a radiometric sensor was used to acquire high-resolution gamma-spectrometry over small mine waste features and a low-grade stockpile in southwestern New Mexico. The sUAS radiometric system mapped local variability within each survey area and revealed ~2–10 m wide zones where radioelements K, Th, and U may be elevated 2–10× the surrounding material. Additionally, the sUAS radiometric data revealed radioelement variability across survey sites, which correlated reasonably well with variability seen in geochemical samples at each survey site, even though samples collected from individual sites showed high local variability. The sUAS data characterized local heterogeneity within mine waste and other small geologic targets at scales of a few meters to tens of meters, which is not possible with traditional crewed aircraft, and with continuity of coverage that is not possible with ground surveys, thus filling a key gap in geophysical survey spatial resolution.

New Mexico

Stream nitrate dynamics driven primarily by discharge and watershed physical and soil characteristics at intensively monitored sites: Insights from deep learning

We developed a suite of models using deep learning to make hindcast predictions of the 7‐day average backward‐looking nitrate concentration at 46 predominantly agricultural sites across the midwestern and eastern United States. The models used daily observations of discharge and meteorological variables and watershed attributes describing anthropogenic modification to hydrology, nitrogen application, climate, groundwater, land use, watershed physiographic attributes, and soils. Across all sites, discharge and watershed soil and physiographic attributes showed a strong influence on model performance. Analysis of drivers across sites revealed considerable regional differences related to controlling processes such as groundwater contributions. We tested several ways to pool data across sites to develop accurate models and make the most effective use of available data. Single‐site models, in which models are trained and tested at a single location, showed generally strong predictive performance (median Kling‐Gupta Efficiency = 0.66), and accuracy at poorly performing sites could be improved by grouping sites with similar characteristics. Developing a single model for all sites reduced performance at several locations with distinct characteristics, suggesting that there is a threshold of dissimilarity beyond which more data does not improve the model. While many deep learning studies have shown that national or even global models can outperform local models, it is not clear that this is true for water quality constituents. This study demonstrates how data can be combined effectively, using deep learning to develop accurate and interpretable models of instream nitrate at sites where varying processes are responsible for changes in nitrate concentration.

Water Resources Research

High‐resolution surface deformation and slip distribution observations for the 2023 Kahramanmaraş, Türkiye, earthquake sequence help constrain the rupture process

Splay, or branch, faults are a common geometric feature of earthquake surface ruptures and may provide constraints on the rupture behavior of an earthquake. The 2023 M w 7.8 Pazarcık and M w 7.5 Elbistan, Türkiye, earthquakes are examples of ruptures with multiple small splays, and the Pazarcık earthquake nucleated on a splay fault, the Narlı fault, before rupturing bilaterally on the East Anatolian fault (EAF). Here, we present 3‐m‐resolution surface displacement from subpixel correlation of Planet Dove optical images for the entirety of both ruptures with corresponding surface slip distributions. For a 30‐km‐long study region spanning the Narlı‐EAF intersection, we compare surface slip derived from five data sets with different resolutions (on‐the‐ground, WorldView, Planet Dove, Sentinel‐2, and Sentinel‐1) to elucidate complementary information. In addition, we integrate information from the surface expression of faulting with published dynamic rupture simulations and rupture process studies to constrain a rupture evolution for the Pazarcık earthquake that is consistent across data sets. This work highlights the complementary nature of disparate surface slip data sets and the role that high‐resolution surface displacement information, including from fault splays, can play in constraining nonunique rupture models and refining understanding of the earthquake rupture process.

Bulletin of the Seismological Society of America

Controls on natural hydrogen generation during serpentinization of mantle rocks

Mantle rocks undergoing serpentinization can generate significant amounts of natural hydrogen, yet the rates and controlling processes remain poorly understood. Here, we constrain the possible hydrogen generation rates in two distinct mantle rock types, the fertile lherzolites of the Western Pyrenees and the depleted harzburgites of Northern California, to relatively low rates of ~0.1 to ~0.5 tonnes H₂ yr⁻¹ km⁻³ of reactive rock. When integrated over the full reactive volumes, this corresponds to total production rates of ~300 to ~600 tonnes H₂ yr⁻¹. By combining three-dimensional geophysical inversion with numerical modelling of fluid-rock processes, we show that hydrogen generation rates are mainly limited by H₂ saturation in the fluid and reaction kinetics. Under these constraints, hydrogen generation in mantle-derived serpentinization systems proceeds slowly, making rapid large-scale replenishment unlikely and suggesting that large, economically relevant accumulations, would require timescales of thousands to tens of thousands of years to develop.

northern California, western Pyrenees

Uranium analysis of single drops of natural waters using the fission-track technique

The fission-track technique has been applied to uranium analysis of natural waters using a single drop of water. Samples may be collected in the field by evaporating a drop of water on a detector, and samples may then be analyzed by returning the detector to the laboratory. A sample collecting kit has been assembled, which facilitates the designed sampling method. Some unique advantages of this technique are picogram sensitivity (10 -12 g) for uranium on single drops of water, maintenance of sample integrity during transport and storage, and the ability to discern whether the uranium is in solution or in the suspended material. Counting the tracks is the most time-consuming part of the analysis, but it can be reduced by using automatic counting systems. The analytical error is generally ± 10 percent over the entire range of concentrations.

Open-File Report

How does the onset of offset influence geologic slip rates?

Geologic slip rates are typically based on the displacement accrued by a geomorphic or stratigraphic feature and the age of the offset feature. Because slip rates are commonly calculated by dividing the displacement of a faulted marker by its age, they contain two open time intervals: the elapsed time between the age of an offset feature and the age of the earthquake that displaced the feature, and the time between the present‐day and the most recent earthquake. Here, we explore the influence of including unconstrained open intervals in geologic slip rate calculations. We test the degree to which these open intervals affect geologic slip rates and their uncertainties, and we find that their influence depends primarily on mean earthquake recurrence intervals (RIs). Slip rates on faults with longer RIs, such as the Wasatch fault, can be greatly influenced by an increase of up to 20% when accounting for open intervals. In contrast, slip rates on faults with shorter RIs, such as the San Andreas fault, are only slightly influenced by the assumption that slip rates calculated over open intervals approximate those calculated over closed intervals. Our analyses indicate that faults with moderate slip rates (∼0.2–5 mm/yr) are sensitive to both open interval effects themselves, as well as methods to quantify and account for these effects. We re‐evaluate how slip rates are calculated and defined in displacement–time space using published deformation records. We explore the utility of assigning a probability distribution to the initiation of offset of the oldest faulted feature and the timing of the most recent earthquake (MRE). We find that calculating geologic slip rates without using probability distributions that capture the timing of the MRE and the onset of offset of the oldest faulted feature, especially on slow‐to‐moderate slip rate faults, can lead to systematic underestimation of average geologic slip rates.

Seismological Research Letters

Rainfall thresholds for postfire debris-flow initiation vary with short-duration rainfall climatology

The size, frequency, and geographic scope of severe wildfires are expanding across the globe, including in the Western United States. Recently burned steeplands have an increased likelihood of debris flows, which pose hazards to downstream communities. The conditions for postfire debris-flow initiation are commonly expressed as rainfall intensity-duration thresholds, which can be estimated given sufficient observational history. However, the spread of wildfire across diverse climates poses a challenge for accurate threshold prediction in areas with limited observations. Studies of mass-movement processes in unburned areas indicate that thresholds vary with local climate, such that higher rainfall rates are required for initiation in climates characterized by frequent intense rainfall. Here, we use three independent methods to test whether initiation of postfire runoff-generated debris flows across the Western United States varies similarly with climate. Through the compilation of observed thresholds at various fires, analysis of the spatial density of observed debris flows, and quantification of feature importance at different spatial scales, we show that postfire debris-flow initiation thresholds vary systematically with short-duration rainfall-intensity climatology. The predictive power of climatological data sets that are readily available before a fire occurs offers a much-needed tool for hazard management in regions that are facing increased wildfire activity, have sparse observational history, and/or have limited resources for field-based hazard assessment. Furthermore, if the observed variation in thresholds reflects long-term adjustment of the landscape to local climate, rapid shifts in rainfall intensity related to climate change will likely induce spatially variable shifts in postfire debris-flow likelihood.

Arizona, California, Colorado, Nevada, New Mexico,

Methodology for construction of a three-layer geologic model of the conterminous United States using land surface, top of bedrock, and top of basement

This report describes the methodology used for the construction of a digital three-layer geologic model of the conterminous United States by mapping the altitude of three surfaces: land surface, the top of bedrock, and the top of basement. These surfaces are mapped through the compilation and synthesis of published stratigraphic horizons from numerous topical studies. The mapped surfaces create a three-layer geologic model with three geomaterial-based subdivisions: unconsolidated to weakly consolidated sediment; layered consolidated rock strata that constitute bedrock; and crystalline rocks that are described as “basement,” consisting of either igneous, metamorphic, or highly deformed rocks. The data compilation and synthesis are highly dependent on the definition of the informal terms “bedrock” and “basement,” which may describe different ages or types of rock in different parts of the conterminous United States. This report presents the conceptualization of the three mapped layers, describes the datasets used, and summarizes the decisions made while compiling the three-layer model from the various sources. This digital dataset was created as part of efforts by the U.S. Geological Survey to develop subsurface geologic data in geospatial form as part of a broad directive to develop two-dimensional and three-dimensional geologic information at detailed, national, and continental scales. This digital dataset partly fulfills the goal of the U.S. Geological Survey’s National Cooperative Geologic Mapping Program to construct a national-scale three-dimensional geologic model.

conterminous United States

Constraining large magnitude event source and path effects using ground motion simulations

The purpose of this study is to use ground motion simulations to investigate ways in which source and path effects for large magnitude events can be represented in non-ergodic GMMs. While we initially developed computation techniques using CyberShake simulations, the range of magnitudes and source-site combinations is not adequate to replicate what is observed empirically. We therefore designed a new ground motion simulation study, which includes earthquakes with a large range of magnitudes distributed uniformly on a fault plane, and sites covering a large range of rupture distances and azimuths. After running a large suite of simulations (M4-M7), we then develop a non-ergodic GMM with the simulation data. We find that the within-site residuals are dominated by the radiation pattern, rupture directivity, and slip patterns. Next, we modify an existing rupture directivity model to fit and remove the observed radiation pattern and rupture directivity from the residuals. We also minimize the contributions of slip patterns by averaging the within-site residuals among multiple source realizations. Finally, after removing the source effects from the within-site residuals, we compare the path effects computed with different magnitude groups using two approaches. The first approach only considers the small events that have the same shortest path to a site with the large events, while the second approach considers all small events on the fault plane. The results indicate that the path effects of large events cannot be satisfactorily approximated with that of small events using either approach.

Conference Paper