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Terrestrial Ecosystems - Topographic Moisture Potential of the Conterminous United States

As part of an effort to map terrestrial ecosystems, the U.S. Geological Survey has generated topographic moisture potential classes to be used in creating maps depicting standardized, terrestrial ecosystem models for the conterminous United States, using an ecosystems classification developed by NatureServe. A biophysical stratification approach, developed for South America and now being implemented globally, was used to model the ecosystem distributions. Substrate moisture regimes strongly influence the differentiation and distribution of terrestrial ecosystems, and therefore topographic moisture potential is one of the key input layers in this biophysical stratification. The method used to produce these topographic moisture potential classes was based on the derivation of ground moisture potential using a combination of computed topographic characteristics (CTI, slope, and aspect) and mapped National Wetland Inventory (NWI) boundaries. This method does not use climate or soil attributes to calculate relative topographic moisture potential since these characteristics are incorporated into the ecosystem model though other input layers. All of the topographic data used for this assessment were derived from the USGS 30-meter National Elevation Dataset (NED ) including the National Compound Topographic Index (CTI). The CTI index is a topographically derived measure of slope for a raster cell and the contributing area from upstream raster cells, and thus expresses potential for water flow to a point. In other words CTI data are 'a quantification of the position of a site in the local landscape', where the lowest values indicate ridges and the highest values indicate stream channels, lakes and ponds. These CTI values were compared to independent estimates of water accumulation by obtaining geospatial data from a number of sample locations representing two types of NWI boundaries: freshwater emergent wetlands and freshwater forested/shrub wetlands. Where these shorelines (the interface between the NWI wetlands and adjacent land) occurred, the CTI values were extracted and a histogram of their statistical distributions was calculated. Based on an evaluation of these histograms, CTI thresholds were developed to separate periodically saturated or flooded land, mesic uplands (moderately moist), and uplands. After the range of CTI values for these three different substrate moisture regimes was determined, the CTI values were grouped into three initial topographic moisture potential classes. As a final step in the generation of this national data layer, the uplands classification was subdivided into either very dry uplands or dry uplands. Very dry uplands were defined as uplands with relatively steep, south-facing slopes, and identification of this class was based on the slope and aspect datasets derived from the NED. The remaining uplands that did not meet these additional criteria were simply re-classified as dry uplands. The final National Topographic Moisture Potential dataset for the conterminous United States contains four classes: periodically saturated or flooded land (CTI = 18.5), mesic uplands (12 =< CTI < 18.5), dry uplands (CTI < 12), and very dry uplands (CTI < 12, Slope > 24 degrees and 91 degrees =< Aspect =< 314 degrees). This map shows a smoothed and generalized image of the four topographic moisture potential classes. Additional information about this map and any of the data developed for the ecosystems modeling of the conterminous United States is available online at http://rmgsc.cr.usgs.gov/ecosystems/.

Scientific Investigations Map↗

Flood-inundation maps for the St. Marys River at Fort Wayne, Indiana

Digital flood-inundation maps for a 9-mile reach of the St. Marys River that extends from South Anthony Boulevard to Main Street at Fort Wayne, Indiana, were created by the U.S. Geological Survey (USGS) in cooperation with the City of Fort Wayne. The inundation maps, which can be accessed through the USGS Flood Inundation Mapping Science Web site, depict estimates of the areal extent of flooding corresponding to selected water levels (stages) at the USGS streamgage 04182000 St. Marys River near Fort Wayne, Ind. Current conditions at the USGS streamgages in Indiana may be obtained from the National Water Information System: Web Interface. In addition, the information has been provided to the National Weather Service (NWS) for incorporation into their Advanced Hydrologic Prediction Service (AHPS) flood warning system. The NWS forecasts flood hydrographs at many places that are often collocated at USGS streamgages. That forecasted peak-stage information, also available on the Internet, may be used in conjunction with the maps developed in this study to show predicted areas of flood inundation. In this study, water-surface profiles were simulated for the stream reach by means of a hydraulic one-dimensional step-backwater model. The model was calibrated using the most current stage-discharge relation at the USGS streamgage 04182000 St. Marys River near Fort Wayne, Ind. The hydraulic model was then used to simulate 11 water-surface profiles for flood stages at 1-ft intervals referenced to the streamgage datum and ranging from bankfull to approximately the highest recorded water level at the streamgage. The simulated water-surface profiles were then combined with a geographic information system digital elevation model (derived from Light Detection and Ranging (LiDAR) data) in order to delineate the area flooded at each water level. A flood inundation map was generated for each water-surface profile stage (11 maps in all) so that for any given flood stage users will be able to view the estimated area of inundation. The availability of these maps along with current stage from USGS streamgages and forecasted stream stages from the NWS provide emergency management personnel and residents with information that is critical for flood response activities such as evacuations and road closures as well as for post flood recovery efforts.

Indiana↗

Evaluation of ground-water flow and land-surface subsidence caused by hypothetical withdrawals in the northern part of the Gulf Coast Aquifer system, Texas

During 2003–04 the U.S. Geological Survey, in cooperation with the Texas Water Development Board (TWDB) and the Harris-Galveston Coastal Subsidence District (HGCSD), used the previously developed Northern Gulf Coast Ground-Water Availability Modeling (NGC GAM) model to evaluate the effects of hypothetical projected withdrawals on ground-water flow in the northern part of the Gulf Coast aquifer system and land-surface subsidence in the NGC GAM model area of Texas. The Gulf Coast aquifer system comprises, from the surface, the Chicot and Evangeline aquifers, the Burkeville confining unit, the Jasper aquifer, and the Catahoula confining unit. Two withdrawal scenarios were simulated. The first scenario comprises historical withdrawals from the aquifer system for 1891–2000 and hypothetical projected withdrawals for 2001–50 compiled by the TWDB (TWDB scenario). The projected withdrawals compiled by the TWDB are based on ground-water demands estimated by regional water planning groups. The second scenario is a “merge” of the TWDB scenario with an alternate set of projected withdrawals from the Chicot and Evangeline aquifers in the Houston metropolitan area for 1995–2030 provided by the HGCSD (HGCSD scenario). Under the TWDB scenario withdrawals from the entire system are projected to be about the same in 2050 as in 2000. The simulated potentiometric surfaces of the Chicot aquifer for 2010, 2020, 2030, 2040, and 2050 show relatively little change in configuration from the simulated 2000 potentiometric surface (maximum water-level depths in southern Harris County 150–200 feet below NGVD 29). The simulated decadal potentiometric surfaces of the Evangeline aquifer show the most change between 2000 and 2010. The area of water levels 250– 400 feet below NGVD 29 in western Harris County in 2000 shifts southeastward to southern Harris County, and water levels recover to 200–250 feet below NGVD 29 by 2010. Water levels in southern Harris County recover to 150–200 feet below NGVD 29 by 2020 and remain in that range through 2050. A relatively small cone of depression in southern Montgomery County that did not appear in the 2000 surface develops and enlarges during the projected period, with a maximum depth of 250–300 feet below NGVD 29 in 2030, 2040, and 2050. The simulated decadal potentiometric surfaces of the Jasper aquifer each have a major cone of depression centered in southern Montgomery County that was minimally developed in 2000 but reaches depths of 550–650 feet below NGVD 29 in the 2020, 2030, 2040, and 2050 surfaces. Under the TWDB scenario the percentage of withdrawals supplied by net recharge increases from 75 percent in 2000 to 87 percent in 2050, and the percentage of withdrawals supplied by storage decreases from 25 percent in 2000 to 13 percent in 2050. Under the HGCSD scenario, withdrawals from the Chicot and Evangeline aquifers increase about 74 percent during 1995–2030; Jasper aquifer withdrawals are unchanged from those of the TWDB scenario. For the 2010, 2020, and 2030 potentiometric surfaces of the Chicot and Evangeline aquifers, the substantially greater withdrawals of the HGCSD scenario relative to those of the TWDB scenario result in progressively deeper cones of depression than those in the potentiometric surfaces associated with the TWDB scenario—for the Chicot aquifer in southern Harris County, 400–450 feet below NGVD 29 in 2030; for the Evangeline aquifer in southern Montgomery County, 700–750 feet below NGVD 29 in 2030. Although Jasper aquifer withdrawals are the same for both scenarios, the major cone of depression centered in southern Montgomery County in the 2030 potentiometric surface is 50 feet deeper at its center (600–700 feet below NGVD 29) than the cone in the 2030 surface under the TWDB scenario. Under the HGCSD scenario, the percentage of withdrawals supplied by net recharge decreases from 72 percent in 1995 to 57 percent in 2030, and the percentage of withdrawals supplied by storage increases from 28 percent in 2000 to 43 percent in 2030. About 85 percent of the increase supplied by storage is from the compaction of clay. Land-surface subsidence in the major area of subsidence centered in Harris and Galveston Counties during 2000–50 that results from simulating the TWDB withdrawal scenario expands slightly to the west and increases in places. The maximum change occurs in the Conroe area where subsidence increases from about 4 to about 13 feet during the projected period. Land-surface subsidence in the major area of subsidence during 1995–2030 that results from simulating the HGCSD withdrawal scenario increases substantially. For example, in east-central Harris County maximum subsidence increases from about 10–11 feet in 1995 to 22 feet in 2030. The hypothetical projected withdrawal scenarios are estimates of future withdrawals and might not represent actual future withdrawals. The simplifying assumptions that the downdip limit of freshwater flow in each hydrogeologic unit is a stable, sharp interface across which no flow occurs and that the base of the system is a no-flow boundary become less realistic and thus increase the uncertainty in results as drawdowns increase. The presence of uncertainty dictates that the results of the predictive simulations described in this report be used with caution in any decision-making process.

Texas↗

Stratabound copper-silver deposits of the Mesoproterozoic Revett Formation, Montana and Idaho, with a section on databases and spatial-data files for the geology and mineral deposits of the Revett Formation

The western Montana copper belt in western Montana and northern Idaho contains several large stratabound copper-silver deposits in fine- to medium-grained quartzite beds of the Revett Formation of the Mesoproterozoic (1,470-1,401 Ma) Belt Supergroup. Production from the deposits at the Troy Mine and lesser production from the Snowstorm Mine has yielded 222,237 tons Cu and 1,657.4 tons Ag. Estimates of undeveloped resources, mostly from the world-class Rock Creek-Montanore deposits, as well as lesser amounts at the Troy Mine, total more than 2.9 million tons Cu and 2,600 tons Ag in 406 million tons of ore.The Rock Creek-Montanore and Troy deposits, which are currently the most significant undeveloped resources identified in the copper belt, are also among the largest stratabound copper-silver deposits in North America and contain about 15 percent of the copper in such deposits in North America. Worldwide, stratabound copper-silver deposits contain 23 percent of all copper resources and are the second-most important global source of the metal after porphyry copper deposits.The Revett Formation, which consists of subequal amounts of argillite, siltite, and quartzite, is informally divided into lower, middle, and upper members on the basis of the proportions of the dominant rock types. The unit thickness increases from north to south, from 1,700 ft near the Troy Mine, 55 mi north of Wallace, Idaho, to more than 5,300 ft at Wallace, Idaho, in the Coeur d'Alene Trough south of the Osburn Fault, a major right-lateral strike-slip fault.Mineral deposits in the Revett Formation occur mostly in the A-D beds of the lower member and in the middle quartzite of the upper member. The deposits are concentrated along a preore pyrite/hematite interface in relatively coarse grained, thick quartzite beds that acted as paleoaquifers for ore fluids. The deposits are characterized by mineral zones (alteration-mineral assemblages) that are a useful guide to the locations of mineral deposits. In particular, the gradational zone between the chalcopyrite-ankerite and pyrite-calcite zones is the site of most mineral deposits. Detailed information on the geology and mineral deposits of the Revett Formation is presented in the accompanying files that include (1) a tab-delimited text file providing details of the geologic and mineral-resource data for 57 Revett-subtype stratabound copper-silver deposits, occurrences, and prospects; (2) the stratigraphic records of 40 diamond-drill cores and 86 measured sections, totaling 150,752 ft of true thickness, which are provided in Excel spreadsheet and Adobe Portable Document Format files; and (3) spatial geologic data consisting of geologic maps of the Revett Formation, the subsurface locations of resources in Revett-subtype stratabound copper-silver deposits based on diamond-drill-core data, and the locations of diamond-drill holes and measured sections. The spatial data are contained in Arc/Info interchange files. Spatial information derived from these data includes the locations of mineral zones, a digital database showing untested exploration areas, and a digital database of permissive tracts for undiscovered mineral deposits.

Idaho, Montana↗

Environmental setting of Maple Creek watershed, Nebraska

The Maple Creek watershed covers a 955-square-kilometer area in eastern Nebraska, which is a region dominated by agricultural land use. The Maple Creek watershed is one of seven areas currently included in a nationwide study of the sources, transport, and fate of water and chemicals in agricultural watersheds. This study, known as the topical study of 'Agricultural Chemicals: Sources, Transport, and Fate' is part of the National Water-Quality Assessment Program being conducted by the U.S. Geological Survey. The Program is designed to describe water-quality conditions and trends based on representative surface- and ground-water resources across the Nation. The objective of the Agricultural Chemicals topical study is to investigate the sources, transport, and fate of selected agricultural chemicals in a variety of agriculturally diverse environmental settings. The Maple Creek watershed was selected for the Agricultural Chemicals topical study because its watershed represents the agricultural setting that characterizes eastern Nebraska. This report describes the environmental setting of the Maple Creek watershed in the context of how agricultural practices, including agricultural chemical applications and irrigation methods, interface with natural settings and hydrologic processes. A description of the environmental setting of a subwatershed within the drainage area of Maple Creek is included to improve the understanding of the variability of hydrologic and chemical cycles at two different scales.

Scientific Investigations Report↗

Application of a stream-aquifer model to Monument Creek for development of a method to estimate transit losses for reusable water, El Paso County, Colorado

The U.S. Geological Survey, in cooperation with Colorado Springs Utilities, the Colorado Water Conservation Board, and the El Paso County Water Authority, began a study in 2004 to (1) apply a stream-aquifer model to Monument Creek, (2) use the results of the modeling to develop a transit-loss accounting program for Monument Creek, (3) revise the existing transit-loss accounting program for Fountain Creek to incorporate new water-management strategies and allow for incorporation of future changes in water-management strategies, and (4) integrate the two accounting programs into a single program with a Web-based user interface. The purpose of this report is to present the results of applying a stream-aquifer model to the Monument Creek study reach. Transit losses were estimated for reusable-water flows in Monument Creek that ranged from 1 to 200 cubic feet per second (ft 3 /s) and for native streamflows that ranged from 0 to 1,000 ft 3 /s. Transit losses were estimated for bank-storage, channel-storage, and evaporative losses. The same stream-aquifer model used in the previously completed (1988) Fountain Creek study was used in the Monument Creek study. Sixteen model nodes were established for the Monument Creek study reach, defining 15 subreaches. Channel length, aquifer length, and aquifer width for the subreaches were estimated from available topographic and geologic maps. Thickness of alluvial deposits and saturated thickness were estimated using lithologic and water-level data from about 100 wells and test holes in or near the Monument Creek study reach. Estimated average transmissivities for the subreaches ranged from 2,000 to 12,000 feet squared per day, and a uniform value of 0.20 was used for storage coefficient. Qualitative comparison of recorded and simulated streamflow at the downstream node for the calibration and verification simulations indicated that the two streamflows compared reasonably well. No adjustments were made to the model parameters. Differences between recorded and simulated streamflow volumes for all calibration and verification simulations ranged from about –8.8 to 7.5 percent; the total error for all simulations was about –0.7 percent. The model was used to estimate bank-storage losses for 10 to 15 native streamflows for each reusable-water flow of 1, 3, 5, 7, 10, 15, 20, 30, 40, 50, 100, and 200 ft 3 /s. Then the 10 to 15 bank-storage loss values were used in least-squares linear regression to estimate a relation between bank-storage loss and native streamflow for each of the 12 reusable-water flow rates. The 12 regression relations then were used to develop “look-up” tables of bank-storage loss for reusable-water flows ranging from 1 to 200 ft 3 /s (in 1-ft 3 /s increments). Additional model simulations indicated that (1) when the ratio of downstream native streamflow to upstream native streamflow was less than 1, bank-storage loss generally increased and (2) when the ratio of downstream native streamflow to upstream native streamflow was larger than 1, bank-storage loss generally decreased. These results were used to develop a bank-storage loss adjustment factor based on the ratio of native streamflow at the downstream node to native streamflow at the upstream node. The model also was used to estimate a recovery period, which is the length of time needed for the bank-storage loss to return to the stream. The recovery period was 1 day for six subreaches; 2 days for four subreaches; between 3 and 12 days for four subreaches; and 28 days for one subreach. Channel-storage losses are about 10 percent of the reusable-water flow for most of the subreaches, except for two subreaches, where the channel-storage losses are about 20 percent, and one subreach, where the losses are about 30 percent, owing to the greater channel lengths. Evaporative losses were estimated by the use of monthly pan-evaporation data and the incremental increase in stream width resulting from any reusable-water flows. Monthly pan-evaporation data were converted to a daily rate. The daily rate, when multiplied by the stream-width increase (in feet) that results from reusable-water flow and by the subreach length (in miles) gives the daily evaporative loss in cubic feet per second.

Colorado↗

The Amphibian Research and Monitoring Initiative (ARMI): 5-year report

The Amphibian Research and Monitoring Initiative (ARMI) is an innovative, multidisciplinary program that began in 2000 in response to a congressional directive for the Department of the Interior to address the issue of amphibian declines in the United States. ARMI&rsquo;s formulation was cross-disciplinary, integrating U.S. Geological Survey scientists from Biology, Water, and Geography to develop a course of action (Corn and others, 2005a). The result has been an effective program with diverse, yet complementary, expertise. ARMI&rsquo;s approach to research and monitoring is multiscale. Detailed investigations focus on a few species at selected local sites throughout the country; monitoring addresses a larger number of species over broader areas (typically, National Parks and National Wildlife Refuges); and inventories to document species occurrence are conducted more extensively across the landscape. Where monitoring is conducted, the emphasis is on an ability to draw statistically defensible conclusions about the status of amphibians. To achieve this objective, ARMI has instituted a monitoring response variable that has nationwide applicability. At research sites, ARMI focuses on studying species/environment interactions, determining causes of observed declines, and developing new techniques to sample populations and analyze data. Results from activities at all scales are provided to scientists, land managers, and policymakers, as appropriate. The ARMI program and the scientists involved contribute significantly to understanding amphibian declines at local, regional, national, and international levels. Within National Parks and National Wildlife Refuges, findings help land managers make decisions applicable to amphibian conservation. For example, the National Park Service (NPS) selected amphibians as a vital sign for several of their monitoring networks, and ARMI scientists provide information and assistance in developing monitoring methods for this NPS effort. At the national level, ARMI has had major exposure at a variety of meetings, including a dedicated symposium at the 2004 joint meetings of the Herpetologists&rsquo; League, the American Society of Ichthyologists and Herpetologists, and the Society for the Study of Amphibians and Reptiles. Several principal investigators have brought international exposure to ARMI through venues such as the World Congress of Herpetology in South Africa in 2005 (invited presentation by Dr. Gary Fellers), the Global Amphibian Summit, sponsored by the International Union for Conservation of Nature (IUCN) and Wildlife Conservation International, in Washington, D.C., 2005 (invited participation by Dr. P.S. Corn), and a special issue of the international herpetological journal Alytes focused on ARMI in 2004 (edited by Dr. C.K. Dodd, Jr.). ARMI research and monitoring efforts have addressed at least 7 of the 21 Threatened and Endangered Species listed by the U.S. Fish and Wildlife Service (California red-legged frog [Rana draytonii], Chiricahua leopard frog [R. chiricahuensis], arroyo toad [Bufo californicus], dusky gopher frog [Rana sevosa], mountain yellow-legged frog [R. muscosa], flatwoods salamander [Ambystoma cingulatum], and the golden coqui [Eleutherodactylus jasperi]), and 9 additional species of concern recognized by the IUCN. ARMI investigations have addressed time-sensitive research, such as emerging infectious diseases and effects on amphibians related to natural disasters like wildfire, hurricanes, and debris flows, and the effects of more constant, environmental change, like urban expansion, road development, and the use of pesticides. Over the last 5 years, ARMI has partnered with an extensive list of government, academic, and private entities. These partnerships have been fruitful and have assisted ARMI in developing new field protocols and analytic tools, in using and refining emerging technologies to improve accuracy and efficiency of data handling, in conducting amphibian disease, malformation, and environmental effects research, and in implementing a network of monitoring and research sites. Accomplishments from these endeavors include more than 40 publications on amphibian status and trends, nearly 100 publications on amphibian ecology and causes of declines, and over 30 methodological publications. Several databases have emerged as a result of ARMI and its partnerships; one, a digital atlas of ranges for all U.S. amphibian species, was used by the IUCN to display amphibian distribution maps in the Global Amphibian Assessment Project. Given the scope of ARMI and the panoply of projects, findings have had implications for policy. Investigations that demonstrate amphibian declines or illuminate causes of declines provide valuable information about habitat management, environmental effects, mechanisms for the spread of disease, and human/amphibian interfaces. This information has been made available to land managers, scientists, educators, Congress and other policymakers, and the public. The support afforded ARMI by Congress has been influential in the program&rsquo;s development and success. The value of ARMI&rsquo;s efforts will continue to increase as we are able to extend our studies spatially and temporally to answer critical questions with more confidence. We are using ARMI&rsquo;s resources efficiently and continuing to develop innovative mechanisms for leveraging resources for maximum effectiveness during challenging financial times. This report is a 5-year retrospective of the structure, methodology, progress, and contributions to the broader scientific community that have resulted from this national USGS program. We evaluate ARMI&rsquo;s success to date, with regard to the challenges faced by the program and the strengths that have emerged. We chart objectives for the next 5 years that build on current accomplishments, highlight areas meriting further research, and direct efforts to overcome existing weaknesses.

Scientific Investigations Report↗

Application of FTLOADDS to Simulate Flow, Salinity, and Surface-Water Stage in the Southern Everglades, Florida

The Comprehensive Everglades Restoration Plan requires numerical modeling to achieve a sufficient understanding of coastal freshwater flows, nutrient sources, and the evaluation of management alternatives to restore the ecosystem of southern Florida. Numerical models include a regional water-management model to represent restoration changes to the hydrology of southern Florida and a hydrodynamic model to represent the southern and western offshore waters. The coastal interface between these two systems, however, has complex surface-water/ground-water and freshwater/saltwater interactions and requires a specialized modeling effort. The Flow and Transport in a Linked Overland/Aquifer Density Dependent System (FTLOADDS) code was developed to represent connected surface- and ground-water systems with variable-density flow. The first use of FTLOADDS is the Southern Inland and Coastal Systems (SICS) application to the southeastern part of the Everglades/Florida Bay coastal region. The need to (1) expand the domain of the numerical modeling into most of Everglades National Park and the western coastal area, and (2) better represent the effect of water-delivery control structures, led to the application of the FTLOADDS code to the Tides and Inflows in the Mangroves of the Everglades (TIME) domain. This application allows the model to address a broader range of hydrologic issues and incorporate new code modifications. The surface-water hydrology is of primary interest to water managers, and is the main focus of this study. The coupling to ground water, however, was necessary to accurately represent leakage exchange between the surface water and ground water, which transfers substantial volumes of water and salt. Initial calibration and analysis of the TIME application produced simulated results that compare well statistically with field-measured values. A comparison of TIME simulation results to previous SICS results shows improved capabilities, particularly in the representation of coastal flows. This improvement most likely is due to a more stable numerical representation of the coastal creek outlets. Sensitivity analyses were performed by varying frictional resistance, leakage, barriers to flow, and topography. Changing frictional resistance values in inland areas was shown to improve water-level representation locally, but to have a negligible effect on area-wide values. These changes have only local effects and are not physically based (as are the unchanged values), and thus have limited validity. Sensitivity tests indicate that the overall accuracy of the simulation is diminished if leakage between surface water and ground water is not simulated. The inclusion of a major road as a complete barrier to surface-water flow influenced the local distribution and timing of flow; however, the changes in total flow and individual creekflows were negligible. The model land-surface altitude was lowered by 0.1 meter to determine the sensitivity to topographic variation. This topographic sensitivity test produced mixed results in matching field data. Overall, the representation of stage did not improve definitively. A final calibration utilized the results of the sensitivity analysis to refine the TIME application. To accomplish this calibration, the friction coefficient was reduced at the northern boundary inflow and increased in the southwestern corner of the model, the evapotranspiration function was varied, additional data were used for the ground-water head boundary along the southeast, and the frictional resistance of the primary coastal creek outlet was increased. The calibration improved the match between measured and simulated total flows to Florida Bay and coastal salinities. Agreement also was improved at most of the water-level sites throughout the model domain.

Scientific Investigations Report↗

Environmental Setting of the Granger Drain and DR2 Basins, Washington, 2003-04

The Granger Drain and DR2 basins are located in the Yakima River basin in south central Washington. These agricultural basins are one of five areas in the United States selected for study as part of the National Water-Quality Assessment Program Agricultural Chemicals: Source, Transport, and Fate Study. The Program is designed to describe water-quality conditions and trends based on representative surface- and ground-water resources across the Nation. The objective of the Agricultural Chemicals topical study is to investigate the sources, transport, and fate of selected agricultural chemicals in a variety of agriculturally diverse environmental settings. The Granger Drain and DR2 basins were selected for the Agricultural Chemicals topical study because they represent the irrigated agricultural setting that characterizes eastern Washington. These basins are located in one of the most productive agricultural areas in the United States. This report describes the environmental setting of the Granger Drain and DR2 basins in the context of how agricultural practices, including agricultural chemical applications and irrigation methods, interface with natural settings and hydrologic processes.

Scientific Investigations Report↗

Estimates of Nutrient Loading by Ground-Water Discharge into the Lynch Cove Area of Hood Canal, Washington

Low dissolved oxygen concentrations in the waters of Hood Canal threaten marine life in late summer and early autumn. Oxygen depletion in the deep layers and landward reaches of the canal is caused by decomposition of excess phytoplankton biomass, which feeds on nutrients (primarily nitrogen compounds) that enter the canal from various sources, along with stratification of the water column that prevents mixing and replenishment of oxygen. Although seawater entering the canal is the largest source of nitrogen, ground-water discharge to the canal also contributes significant quantities, particularly during summer months when phytoplankton growth is most sensitive to nutrient availability. Quantifying ground-water derived nutrient loads entering an ecologically sensitive system such as Hood Canal is a critical component of constraining the total nutrient budget and ultimately implementing effective management strategies to reduce impacts of eutrophication. The amount of nutrients entering Hood Canal from ground water was estimated using traditional and indirect measurements of ground-water discharge, and analysis of nutrient concentrations. Ground-water discharge to Hood Canal is variable in space and time because of local geology, variable hydraulic gradients in the ground-water system adjacent to the shoreline, and a large tidal range of 3 to 5 meters. Intensive studies of ground-water seepage and hydraulic-head gradients in the shallow, nearshore areas were used to quantify the freshwater component of submarine ground-water discharge (SGD), whereas indirect methods using radon and radium geochemical tracers helped quantify total SGD and recirculated seawater. In areas with confirmed ground-water discharge, shore-perpendicular electrical resistivity profiles, continuous electromagnetic seepage-meter measurements, and continuous radon measurements were used to visualize temporal variations in ground-water discharge over several tidal cycles. The results of these field investigations show that ground-water discharge into the Lynch Cove area of Hood Canal is highly dynamic and strongly affected by the large tidal range. In areas with a steep shoreline and steep hydraulic gradient, ground-water discharge is spatially concentrated in or near the intertidal zone, with increased discharge during low tide. Topographically flat areas with weak hydraulic gradients had more spatial variability, including larger areas of seawater recirculation and more widely dispersed discharge. Measured total-dissolved-nitrogen concentrations in ground water ranged from below detection limits to 2.29 milligrams per liter and the total load entering Lynch Cove was estimated to be approximately 98 ? 10.3 metric tons per year (MT/yr). This estimate is based on net freshwater seepage rates from Lee-type seepage meter measurements and can be compared to estimates derived from geochemical tracer mass balance estimates (radon and radium) of 231 to 749 MT/yr, and previous water-mass-balance estimates (14 to 47 MT/ yr). Uncertainty in these loading estimates is introduced by complex biogeochemical cycles of relevant nutrient species, the representativeness of measurement sites, and by energetic dynamics at the coastal aquifer-seawater interface caused by tidal forcing.

Scientific Investigations Report↗

Development of a Monitoring Protocol to Detect Ecological Change in the Intertidal Zone of Sitka National Historical Park, Alaska

A pilot study to develop and test a probability-based intertidal monitoring protocol for Sitka National Historical Park was conducted from 1999 to 2003. In 1999, the basic design, with a focus on sampling the whole of the designated intertidal was created, and sampling was conducted for sessile species and large mobile invertebrates by point-intercept sampling of vertical transects and band surveys along transects, respectively. In 2002 and 2003, the same types of sampling were conducted, but quadrat sampling for small mobile invertebrates was added and then modified. This project has produced basic data on the presence, abundance, and spatial distribution of substrates and intertidal biota. Additionally, statistical power analyses conducted on the biological data have allowed assessment of the ability of the sampling to detect trends in the abundance of the predominant species. Current sampling has an 80 percent probability to detect +10 percent annual changes in abundance of all targeted species with an a = 0.05; the ability to detect -10 percent trends is not as uniformly high. Various options are discussed for decreasing the spatial variance of the data. The information presented provides a basis for discussion of the major questions being asked, how the sampling design might be reconfigured to be consistent in approach, and how the intertidal monitoring should interface with other potential intertidal monitoring.

Scientific Investigations Report↗

Methods for estimating monthly and annual streamflow statistics at ungaged sites in Utah

The monthly 80-, 50-, and 20-percent exceedance streamflows were calculated for 266 streamflow-gaging stations in Utah and the surrounding states. Using geographic information systems software, 24 physiographic and climatic basin characteristics were computed for each gaging station location. Using these data, regional regression equations were created to predict monthly 80-, 50-, and 20-percent streamflow and annual mean streamflow at ungaged sites in Utah. The state of Utah was divided into seven distinct geohydrologic regions on the basis of a variety of physiographic, climatic, and hydrologic characteristics. Separate regression equations were developed for each region except region 3, which was combined with region 5 because of the small number of gaging stations in region 3. Root mean square error percent for the equations ranged from 34 to 379 percent. The equations are more reliable for predicting high-streamflow statistics (20-percent exceedance) than for predicting the low-streamflow statistics (80-percent exceedance). In general, the mean annual streamflow equations had smaller errors than the monthly predicting equations. The developed equations documented in this report will be implemented in StreamStats, a USGS Web-based tool that allows users to obtain a variety of streamflow statistics and basin characteristics by selecting a location on a map interface.

Utah↗

Simulations of Groundwater Flow and Particle Tracking Analysis in the Area Contributing Recharge to a Public-Supply Well near Tampa, Florida, 2002-05

Shallow ground water in the north-central Tampa Bay region, Florida, is affected by elevated nitrate concentrations, the presence of volatile organic compounds, and pesticides as a result of groundwater development and intensive urban land use. The region relies primarily on groundwater for drinking-water supplies. Sustainability of groundwater quality for public supply requires monitoring and understanding of the mechanisms controlling the vulnerability of public-supply wells to contamination. A single public-supply well was selected for intensive study based on the need to evaluate the dominant processes affecting the vulnerability of public-supply wells in the Upper Floridan aquifer in the City of Temple Terrace near Tampa, Florida, and the presence of a variety of chemical constituents in water from the well. A network of 29 monitoring wells was installed, and water and sediment samples were collected within the area contributing recharge to the selected public-supply well to support a detailed analysis of physical and chemical conditions and processes affecting the water chemistry in the well. A three-dimensional, steady-state groundwater flow model was developed to evaluate the age of groundwater reaching the well and to test hypotheses on the vulnerability of the well to nonpoint source input of nitrate. Particle tracking data were used to calculate environmental tracer concentrations of tritium and sulfur hexafluoride and to calibrate traveltimes and compute flow paths and advective travel times in the model area. The traveltime of particles reaching the selected public-supply well ranged from less than 1 day to 127.0 years, with a median of 13.1 years; nearly 45 percent of the simulated particle ages were less than about 10 years. Nitrate concentrations, derived primarily from residential/commercial fertilizer use and atmospheric deposition, were highest (2.4 and 6.11 milligrams per liter as nitrogen, median and maximum, respectively) in shallow groundwater from the surficial aquifer system and lowest (less than the detection level of 0.06 milligram per liter) in the deeper Upper Floridan aquifer. Denitrification occurred near the interface of the surficial aquifer system and the underlying intermediate confining unit, within the intermediate confining unit, and within the Upper Floridan aquifer because of reducing conditions in this part of the flow system. However, simulations indicate that the rapid movement of water from the surficial aquifer system to the selected public-supply well through karst features (sinkholes) and conduit layers that bypass the denitrifying zones (short-circuits), coupled with high pumping rates, allow nitrate to reach the selected public-supply well in concentrations that resemble those of the overlying surficial aquifer system. Water from the surficial aquifer system with elevated concentrations of nitrate and low concentrations of some volatile organic compounds and pesticides is expected to continue moving into the selected public-supply well, because calculated flux-weighted concentrations indicate the proportion of young affected water contributing to the well is likely to remain relatively stable over time. The calculated nitrate concentration in the selected public-supply well indicates a lag of 1 to 10 years between peak concentrations of nonpoint source contaminants in recharge and appearance in the well.

Scientific Investigations Report↗

Hydrologic and Water-Quality Conditions During Restoration of the Wood River Wetland, Upper Klamath River Basin, Oregon, 2003-05

Restoring previously drained wetlands is a strategy currently being used to improve water quality and decrease nutrient loading into Upper Klamath Lake, Oregon. In this 2003-05 study, ground- and surface-water quality and hydrologic conditions were characterized in the Wood River Wetland. Nitrogen and phosphorus levels, primarily as dissolved organic nitrogen and ammonium (NH4) and soluble reactive phosphorus (SRP), were high in surface waters. Dissolved organic carbon concentrations also were elevated in surface water, with median concentrations of 44 and 99 milligrams of carbon per liter (mg-C/L) in the North and South Units of the Wood River Wetland, respectively, reaching a maximum of 270 mg-C/L in the South Unit in late autumn. Artesian well water produced NH4 and SRP concentrations of about 6,000 micrograms per liter (ug/L), and concentrations of 36,500 ug-N/L NH4 and 4,110 ug-P/L SRP in one 26-28 ft deep piezometer well. Despite the high ammonium concentrations, the nitrate levels were moderate to low in wetland surface and ground waters. The surface-water concentrations of NH4 and SRP increased in spring and summer, outpacing those for chloride (a conservative tracer), indicative of evapoconcentration. In-situ chamber experiments conducted in June and August 2005 indicated a positive flux of NH4 and SRP from the wetland sediments. Potential sources of NH4 and SRP include diffusion of nutrients from decomposed peat, decomposing aquatic vegetation, or upwelling ground water. In addition to these inputs, evapoconcentration raised surface-water solute concentrations to exceedingly high values by the end of summer. The increase was most pronounced in the South Unit, where specific conductance reached 2,500 uS/cm and median concentrations of total nitrogen and total phosphorus reached 18,000-36,500 ug-N/L and about 18,000-26,000 ug-P/L, respectively. Water-column SRP and total phosphorus levels decreased during autumn and winter following inputs of irrigation water and precipitation, which have lower nutrient concentrations. The SRP concentrations, however, decreased faster than the dilution rate alone, possibly due to precipitation of phosphorus with iron, manganese, or calcium. The high concentrations of dissolved nitrogen and phosphorus during the growing season give rise to a rich plant community in the wetland consisting of emergent and submergent macrophytes and algae including phytoplankton and benthic and epiphytic algae that have pronounced effects on dissolved oxygen (DO) and pH. Midday readings of surface-water DO during summer often were supersaturated (as much as 310 percent saturation) with elevated pH (as much as 9.2 units), indicative of high rates of photosynthesis. Minimum DO concentrations in the shallow ground-water piezometer wells were 0.4 mg/L in the North Unit and 0.8 mg/L in the South Unit during summer, which is probably low enough to support microbial denitrification. Denitrification was confirmed during in-situ experiments conducted at the sediment-water interface, but rates were low due to low background nitrate (NO3). Nevertheless, denitrification (and plant uptake) likely contribute to low nitrate levels. Another possible cause of low nitrate levels is dissimilatory nitrate reduction to ammonia (DNRA), a microbial process that converts and decreases nitrate to ammonia. DNRA explains the excess ammonia production measured in the chambers treated with nitrate. Surface-water levels and standing surface-water volume in the Wood River Wetland reached a maximum in early spring, inundating 80-90 percent of the wetland. Surface-water levels and standing volume then declined reaching a minimum in August through November, when the South Unit was only 10 percent inundated and the North Unit was nearly dry. The shallow ground-water levels followed a trend similar to surface-water levels and indicated a strong upward gradient. A monthly water budget was developed individually for the North

Scientific Investigations Report↗

Watershed Models for Decision Support for Inflows to Potholes Reservoir, Washington

A set of watershed models for four basins (Crab Creek, Rocky Ford Creek, Rocky Coulee, and Lind Coulee), draining into Potholes Reservoir in east-central Washington, was developed as part of a decision support system to aid the U.S. Department of the Interior, Bureau of Reclamation, in managing water resources in east-central Washington State. The project is part of the U.S. Geological Survey and Bureau of Reclamation collaborative Watershed and River Systems Management Program. A conceptual model of hydrology is outlined for the study area that highlights the significant processes that are important to accurately simulate discharge under a wide range of conditions. The conceptual model identified the following factors as significant for accurate discharge simulations: (1) influence of frozen ground on peak discharge, (2) evaporation and ground-water flow as major pathways in the system, (3) channel losses, and (4) influence of irrigation practices on reducing or increasing discharge. The Modular Modeling System was used to create a watershed model for the four study basins by combining standard Precipitation Runoff Modeling System modules with modified modules from a previous study and newly modified modules. The model proved unreliable in simulating peak-flow discharge because the index used to track frozen ground conditions was not reliable. Mean monthly and mean annual discharges were more reliable when simulated. Data from seven USGS streamflow-gaging stations were used to compare with simulated discharge for model calibration and evaluation. Mean annual differences between simulated and observed discharge varied from 1.2 to 13.8 percent for all stations used in the comparisons except one station on a regional ground-water discharge stream. Two thirds of the mean monthly percent differences between the simulated mean and the observed mean discharge for these six stations were between -20 and 240 percent, or in absolute terms, between -0.8 and 11 cubic feet per second. A graphical user interface was developed for the user to easily run the model, make runoff forecasts, and evaluate the results. The models; however, are not reliable for managing short-term operations because of their demonstrated inability to match individual storm peaks and individual monthly discharge values. Short-term forecasting may be improved with real-time monitoring of the extent of frozen ground and the snow-water equivalent in the basin. Despite the models unreliability for short-term runoff forecasts, they are useful in providing long-term, time-series discharge data where no observed data exist.

Scientific Investigations Report↗

Design and Performance of an Enhanced Bioremediation Pilot Test in a Tidal Wetland Seep, West Branch Canal Creek, Aberdeen Proving Ground, Maryland

Because of a lack of available in situ remediation methods for sensitive wetland environments where contaminated groundwater discharges, the U.S. Geological Survey, in cooperation with the U.S. Army Garrison, Aberdeen Proving Ground, Maryland, conceived, designed, and pilot tested a permeable reactive mat that can be placed horizontally at the groundwater/surface-water interface. Development of the reactive mat was part of an enhanced bioremediation study in a tidal wetland area along West Branch Canal Creek at Aberdeen Proving Ground, where localized areas of preferential discharge (seeps) transport groundwater contaminated with carbon tetrachloride, chloroform, tetrachloroethene, trichloroethene, and 1,1,2,2-tetrachloroethane from the Canal Creek aquifer to land surface. The reactive mat consisted of a mixture of commercially available organic- and nutrient-rich peat and compost that was bioaugmented with a dechlorinating microbial consortium, WBC-2, developed for this study. Due to elevated chlorinated methane concentrations in the pilot test site, a layer of zero-valent iron mixed with the peat and compost was added at the base of the reactive mat to promote simultaneous abiotic and biotic degradation. The reactive mat for the pilot test area was designed to optimize chlorinated volatile organic compound degradation efficiency without altering the geotechnical and hydraulic characteristics, or creating undesirable water quality in the surrounding wetland area, which is referred to in this report as achieving geotechnical, hydraulic, and water-quality compatibility. Optimization of degradation efficiency was achieved through the selection of a sustainable organic reactive matrix, electron donor, and bioaugmentation method. Consideration of geotechnical compatibility through design calculations of bearing capacity, settlement, and geotextile selection showed that a 2- to 3-feet tolerable thickness of the mat was possible, with 0.17 feet settlement predicted for unconsolidated sediments between 1.5 and 6 years following installation of the reactive mat. To ensure hydraulic compatibility in the mat design, mat materials that had a hydraulic conductivity greater than the surrounding wetland sediments were selected, and the mixture was optimized to consist of 1.5 parts compost, 1.5 parts peat and 1 part sand as a safeguard against fluidization. Sediment and matrix properties also indicated that a nonwoven geotextile with a cross-plane flow greater than that of the native sediments was suitable as the base of the reactive mat. Another nonwoven geotextile was selected for installation between the iron mix and organic zones of the mat to create more laminar flow conditions within the mat. Total metals and sequential extraction procedure analyses of mat materials, which were conducted to evaluate water-quality compatibility of the mat materials, showed that concentrations of metals in the compost ranged from one-half to one order of magnitude below consensus-based probable effect concentrations in sediment. A 22-inch-thick reactive mat, containing 0.5 percent WBC-2 by volume, was constructed at seep area 3-4W and monitored from October 2004 through October 2005 for the pilot test. No local, immediate failure of the mat or of wetland sediments was observed during mat installation, indicating that design estimates of bearing capacity and geotextile textile selection ensured the integrity of the mat and wetland sediments during and following installation. Measurements of surface elevation of the mat showed an average settlement of the mat surface of approximately 0.25 feet after 10 months, which was near the predicted settlement for unconsolidated sediment. Monitoring showed rapid establishment and sustainment throughout the year of methanogenic conditions conducive to anaerobic biodegradation and efficient dechlorination activity by WBC-2. The median mass removal of chloromethanes and total chloroethenes and ethane during the

Scientific Investigations Report↗

Description and evaluation of numerical groundwater flow models for the Edwards Aquifer, south-central Texas

A substantial number of public water system wells in south-central Texas withdraw groundwater from the karstic, highly productive Edwards aquifer. However, the use of numerical groundwater flow models to aid in the delineation of contributing areas for public water system wells in the Edwards aquifer is problematic because of the complex hydrogeologic framework and the presence of conduit-dominated flow paths in the aquifer. The U.S. Geological Survey, in cooperation with the Texas Commission on Environmental Quality, evaluated six published numerical groundwater flow models (all deterministic) that have been developed for the Edwards aquifer San Antonio segment or Barton Springs segment, or both. This report describes the models developed and evaluates each with respect to accessibility and ease of use, range of conditions simulated, accuracy of simulations, agreement with dye-tracer tests, and limitations of the models. These models are (1) GWSIM model of the San Antonio segment, a FORTRAN computer-model code that pre-dates the development of MODFLOW; (2) MODFLOW conduit-flow model of San Antonio and Barton Springs segments; (3) MODFLOW diffuse-flow model of San Antonio and Barton Springs segments; (4) MODFLOW Groundwater Availability Modeling [GAM] model of the Barton Springs segment; (5) MODFLOW recalibrated GAM model of the Barton Springs segment; and (6) MODFLOW–DCM (dual conductivity model) conduit model of the Barton Springs segment. The GWSIM model code is not commercially available, is limited in its application to the San Antonio segment of the Edwards aquifer, and lacks the ability of MODFLOW to easily incorporate newly developed processes and packages to better simulate hydrologic processes. MODFLOW is a widely used and tested code for numerical modeling of groundwater flow, is well documented, and is in the public domain. These attributes make MODFLOW a preferred code with regard to accessibility and ease of use. The MODFLOW conduit-flow model incorporates improvements over previous models by using (1) a user-friendly interface, (2) updated computer codes (MODFLOW–96 and MODFLOW–2000), (3) a finer grid resolution, (4) less-restrictive boundary conditions, (5) an improved discretization of hydraulic conductivity, (6) more accurate estimates of pumping stresses, (7) a long transient simulation period (54 years, 1947–2000), and (8) a refined representation of high-permeability zones or conduits. All of the models except the MODFLOW–DCM conduit model have limitations resulting from the use of Darcy’s law to simulate groundwater flow in a karst aquifer system where non-Darcian, turbulent flow might actually dominate. The MODFLOW–DCM conduit model is an improvement in the ability to simulate karst-like flow conditions in conjunction with porous-media-type matrix flow. However, the MODFLOW–DCM conduit model has had limited application and testing and currently (2008) lacks commercially available pre- and post-processors. The MODFLOW conduit-flow and diffuse-flow Edwards aquifer models are limited by the lack of calibration for the northern part of the Barton Springs segment (Travis County) and their reliance on the use of the calibrated hydraulic conductivity and storativity values from the calibrated Barton Springs segment GAM model. The major limitation of the Barton Springs segment GAM and recalibrated GAM models is that they were calibrated to match measured water levels and springflows for a restrictive range of hydrologic conditions, with each model having different hydraulic conductivity and storativity values appropriate to the hydrologic conditions that were simulated. The need for two different sets of hydraulic conductivity and storativity values increases the uncertainty associated with the accuracy of either set of values, illustrates the non-uniqueness of the model solution, and probably most importantly demonstrates the limitations of using a one-layer model to represent the heterogeneous hydrostratigraphic units composing the Edwards aquifer. In general, the best matches or agreement between groundwater flow directions inferred by numerical model simulation, and by dye-tracer tests, are observed where model outputs accurately reproduce the configuration of the potentiometric surface with regard to the positions of major and minor groundwater troughs and divides. None of the models, with the possible exception of the MODFLOW–DCM conduit model, has a documented capability to accurately simulate travel times for conduit-dominated velocities in the Edwards aquifer. Public water system assessments of wells in the Barton Springs segment of the Edwards aquifer, and elsewhere where conduit-flow conditions are thought to dominate aquifer hydraulic behavior, might be enhanced by use of either the MODFLOW–DCM model or the newly developed U.S. Geological Survey MODFLOW Conduit-Flow Process module for MODFLOW–2005, because each incorporates a type of dual or triple hydraulic conductivity approach and has the capability to explicitly simulate turbulent flow and conduit hydraulic characteristics.

Texas↗

Sources of groundwater based on Helium analyses in and near the freshwater/saline-water transition zone of the San Antonio segment of the Edwards Aquifer, South-Central Texas, 2002-03

This report evaluates dissolved noble gas data, specifically helium-3 and helium-4, collected by the U.S. Geological Survey, in cooperation with the San Antonio Water System, during 2002-03. Helium analyses are used to provide insight into the sources of groundwater in the freshwater/saline-water transition zone of the San Antonio segment of the Edwards aquifer. Sixty-nine dissolved gas samples were collected from 19 monitoring wells (categorized as fresh, transitional, or saline on the basis of dissolved solids concentration in samples from the wells or from fluid-profile logging of the boreholes) arranged in five transects, with one exception, across the freshwater/saline-water interface (the 1,000-milligrams-per-liter dissolved solids concentration threshold) of the Edwards aquifer. The concentration of helium-4 (the dominant isotope in atmospheric and terrigenic helium) in samples ranged from 63 microcubic centimeters per kilogram at standard temperature (20 degrees Celsius) and pressure (1 atmosphere) in a well in the East Uvalde transect to 160,587 microcubic centimeters per kilogram at standard temperature and pressure in a well in the Kyle transect. Helium-4 concentrations in the 10 saline wells generally increase from the western transects to the eastern transects. Increasing helium-4 concentrations from southwest to northeast in the transition zone, indicating increasing residence time of groundwater from southwest to northeast, is consistent with the longstanding conceptualization of the Edwards aquifer in which water recharges in the southwest, flows generally northeasterly (including in the transition zone, although more slowly than in the fresh-water zone), and discharges at major springs in the northeast. Excess helium-4 was greater than 1,000 percent for 60 of the 69 samples, indicating that terrigenic helium is largely present and that most of the excess helium-4 comes from sources other than the atmosphere. The helium data of this report cannot be used to identify sources of groundwater in and near the transition zone of the Edwards aquifer in terms of specific geologic (stratigraphic) units or hydrogeologic units (aquifers or confining units). However, the data indicate that the source or sources of the helium, and thus the water in which the helium is dissolved, in the transition zone are mostly terrigenic in origin rather than atmospheric. Whether most helium in and near the transition zone of the Edwards aquifer originated either in rocks outside the transition zone and at depth or in the adjacent Trinity aquifer is uncertain; but most of the helium in the transition zone had to enter the transition zone from the Trinity aquifer because the Trinity aquifer is the hydrogeologic unit immediately beneath and laterally adjacent to the transition zone of the Edwards aquifer. Thus the helium data support a hypothesis of sufficient hydraulic connection between the Trinity and Edwards aquifers to allow movement of water from the Trinity aquifer to the transition zone of the Edwards aquifer.

Texas↗