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USGS2024

Distribution, abundance, and breeding activities of the Least Bell's Vireo at Marine Corps Base Camp Pendleton, California—2021 annual report

Executive Summary The purpose of this report is to provide the Marine Corps with an annual summary of abundance, breeding activity, demography, and habitat use of endangered Least Bell’s Vireos ( Vireo bellii pusillus ) at Marine Corps Base Camp Pendleton (MCBCP or “Base”). Surveys for the Least Bell's Vireo were completed at MCBCP, California, between April 5 and July 13, 2021. Core survey areas and a subset of non-core areas in drainages containing riparian habitat suitable for vireos were surveyed three to four times. We detected 551 territorial male vireos and 26 transient vireos in core survey areas. An additional 98 territorial male vireos were detected in non-core survey areas. Transient vireos were detected on 8 of the 10 drainages/sites surveyed (core and non-core areas). Of the vireo territories in core areas, 89 percent were on the four most populated drainages, with the Santa Margarita River containing 70 percent of all territories in areas surveyed on Base. In core areas, 75 percent of male vireos were confirmed as paired; 76 percent of male vireos in non-core areas were confirmed as paired. The number of documented Least Bell’s Vireo territories in core survey areas on MCBCP decreased 18 percent from 2020 to 2021. The number of territories in all but two core survey area drainages decreased by one or more between 2020 and 2021. The decrease in vireo numbers on MCBCP (18 percent) was consistent with population changes in surrounding areas, including the lower San Luis Rey River (24-percent decrease) and the middle San Luis Rey River (6-percent decrease). Most core-area vireo territories (59 percent of males) were in willow ( Salix spp.) riparian habitat. An additional 7 percent of birds occupied willow habitat co-dominated by Western sycamores ( Platanus racemosa ) or Fremont cottonwoods ( Populus fremontii ). Of all the territories surveyed, 25 percent were in riparian scrub dominated by mule fat ( Baccharis salicifolia ) or sandbar willow ( S. exigua ). Upland scrub was used by 8 percent of vireos; 1 percent of vireo territories were in non-native vegetation, and less than 1 percent of vireo territories were in alder or drier habitats co-dominated by coast live oak ( Quercus agrifolia ) and sycamore. In 2019, MCBCP began operating an artificial seep along the Santa Margarita River; then, in 2021, two additional artificial seeps became operational. The artificial seeps pumped water to the surface starting in March and ending in August each year during daylight hours and were designed to increase the amount of surface water present to enhance Southwestern Willow Flycatcher ( Empidonax traillii extimus ) breeding habitat. Although this enhancement was designed to benefit flycatchers, few flycatchers have inhabited the seep areas within the past several years; therefore, vireos were selected as a surrogate species to determine effects of the habitat enhancement. This report presents the second year of analyses of vireo and vegetation response to the artificial seeps. We sampled vegetation in two Seep sites and two Reference sites to determine the effects of a new water diversion dam that was completed in 2019 and two seep pumps that were installed to enhance surface water along the Santa Margarita River in 2019 and 2021. We measured higher total vegetation cover below 2 meters (m) at Seep sites than at Reference sites and lower total vegetation cover above 5 m at Seep sites than at Reference sites. Native herbaceous cover was also higher below 4 m at Seep sites than at Reference sites. Woody cover was lower above 5 m at Seep sites than at Reference sites. Soil moisture did not differ between Seep and Reference sites. The U.S. Geological Survey has been color banding Least Bell’s Vireos on Marine Corps Base Camp Pendleton since 1995. In 2021, we continued to color band and resight color banded Least Bell’s Vireos to evaluate adult site fidelity, between-year movement, and the effect of surface-water enhancement on vireo site fidelity and between-year movement. We banded 164 Least Bell's Vireos for the first time during the 2021 season. Birds banded included 3 adult vireos and 161 juvenile vireos. All adult vireos were banded with unique color combinations. The juvenile vireos (all nestlings) were banded with a single gold numbered federal band on the right leg. There were 52 Least Bell's Vireos banded before the 2021 breeding season that were resighted and identified on Base in 2021. Of these vireos, 45 were banded on Base, 6 were originally banded on the San Luis Rey River, and 1 was banded at Marine Corps Air Station, Camp Pendleton. Adult birds of known age ranged from 1 to at least 7 years old. Base-wide survival of vireos was affected by sex, age, and year. Males had a slightly but significantly higher survival rate than females. Adults had a higher survival rate than first-year vireos. Survival of both adults and first-year birds was high from 2007 to 2008 and from 2012 to 2013 and low from 2020 to 2021. The return rate of adult vireos to Seep or Reference sites ranged from 45 to 57 percent. Most returning adult vireos showed strong between-year site fidelity. Of the adults present in 2020 and 2021, 84 percent (94 percent of males; no females) returned to within 100 m of their previous territory. The average between-year movement for returning adult vireos was 0.1±0.2 kilometer (km). The average movement of first-year vireos detected in 2021 that fledged from a known nest on MCBCP in 2020 was 1.1±0.7 km. We monitored Least Bell's Vireo pairs to evaluate the effects of surface-water enhancement on nest success and breeding productivity. Vireos were monitored at two Seep sites and two Reference sites. Early in 2021, a seep was installed in a 2020 Reference site, which changed the status of this monitoring site from Reference to Seep. Nesting activity was monitored between April 5 and July 22 in 50 territories within the Seep and Reference sites (25 at Seep sites and 25 at Reference sites). All territories, except one, were occupied by pairs and all were fully monitored, meaning all nesting attempts were monitored at these territories. During the monitoring period, 97 nests (42 in Seep sites and 55 in Reference sites) were monitored. Breeding productivity was similar at the Seep site and Reference sites (3.6 and 3.4 young per pair, respectively), with 84 percent of Seep pairs and 88 percent of Reference pairs successfully fledging at least one young in 2021. Seep sites had a higher proportion of all eggs that hatched and also a higher proportion of nests with eggs that hatched than Reference sites. Seep sites and References sites had similar proportions of hatchlings that fledged and nests with hatchlings that fledged. According to the best model, daily nest survival in 2021 was higher in Seep sites than in Reference sites. Completed nests at the Seep site were more likely to be successful than nests at Reference sites in 2021. At Seep sites, 75 percent of nests fledged young, whereas 53 percent of nests at Reference successfully fledged young. Vireos at Reference sites had to expend more energy in extra nest-building and egg-laying to produce a similar number of young as vireos at Seep sites. Predation was believed to be the primary source of nest failure at both sites. Predation accounted for 100 percent and 83 percent of nest failures at Seep and Reference sites, respectively. Failure of the remaining nests was attributed to infertile eggs and other unknown causes. There were 11 plant species used as hosts for vireo nests in 2021. Successful vireo nests at Reference sites were further from the edge of host plants (closer to the center) and further from the edge of the nest plant clump than unsuccessful nests. Vireo nests at Seep sites were further from the edge of the host plant and the nest plant clump than vireo nests at Reference sites.

California↗

USGS2012

Ecosystem engineering varies spatially: a test of the vegetation modification paradigm for prairie dogs

Colonial, burrowing herbivores can be engineers of grassland and shrubland ecosystems worldwide. Spatial variation in landscapes suggests caution when extrapolating single-place studies of single species, but lack of data and the need to generalize often leads to ‘model system’ thinking and application of results beyond appropriate statistical inference. Generalizations about the engineering effects of prairie dogs ( Cynomys sp.) developed largely from intensive study at a single complex of black-tailed prairie dogs C. ludovicianus in northern mixed prairie, but have been extrapolated to other ecoregions and prairie dog species in North America, and other colonial, burrowing herbivores. We tested the paradigm that prairie dogs decrease vegetation volume and the cover of grasses and tall shrubs, and increase bare ground and forb cover. We sampled vegetation on and off 279 colonies at 13 complexes of 3 prairie dog species widely distributed across 5 ecoregions in North America. The paradigm was generally supported at 7 black-tailed prairie dog complexes in northern mixed prairie, where vegetation volume, grass cover, and tall shrub cover were lower, and bare ground and forb cover were higher, on colonies than at paired off-colony sites. Outside the northern mixed prairie, all 3 prairie dog species consistently reduced vegetation volume, but their effects on cover of plant functional groups varied with prairie dog species and the grazing tolerance of dominant perennial grasses. White-tailed prairie dogs C. leucurus in sagebrush steppe did not reduce shrub cover, whereas black-tailed prairie dogs suppressed shrub cover at all complexes with tall shrubs in the surrounding habitat matrix. Black-tailed prairie dogs in shortgrass steppe and Gunnison's prairie dogs C. gunnisoni in Colorado Plateau grassland both had relatively minor effects on grass cover, which may reflect the dominance of grazing-tolerant shortgrasses at both complexes. Variation in modification of vegetation structure may be understood in terms of the responses of different dominant perennial grasses to intense defoliation and differences in foraging behavior among prairie dog species. Spatial variation in the engineering role of prairie dogs suggests spatial variation in their keystone role, and spatial variation in the roles of other ecosystem engineers. Thus, ecosystem engineering can have a spatial component not evident from single-place studies.

Ecography: Pattern and Diversity in Ecology↗

USGS2006

Hydrology and water quality in the Green River and surrounding agricultural areas near Green River in Emery and Grand Counties, Utah, 2004-05

Water from the Colorado River and its tributaries is used for municipal and industrial purposes by about 27 million people and irrigates nearly 4 million acres of land in the Western United States. Water users in the Upper Colorado River Basin consume water from the Colorado River and its tributaries, reducing the amount of water in the river. In addition, application of water to agricultural land within the basin in excess of crop needs can increase the transport of dissolved solids to the river. As a result, dissolved-solids concentrations in the Colorado River have increased, affecting downstream water users. During 2004-05, the U.S. Geological Survey, in cooperation with the Natural Resources Conservation Service, investigated the occurrence and distribution of dissolved solids in water from the agricultural areas near Green River, Utah, and in the adjacent reach of the Green River, a principle tributary of the Colorado River. The flow-weighted concentration of dissolved solids diverted from the Green River for irrigation during 2004 and 2005 was 357 milligrams per liter and the mean concentration of water collected from seeps and drains where water was returning to the river during low-flow conditions was 4,170 milligrams per liter. The dissolved-solids concentration in water from the shallow part of the ground-water system ranged from 687 to 55,900 milligrams per liter. Measurable amounts of dissolved solids discharging to the Green River are present almost exclusively along the river banks or near the mouths of dry washes that bisect the agricultural areas. The median dissolved-solids load in discharge from the 17 drains and seeps visited during the study was 0.35 ton per day. Seasonal estimates of the dissolved-solids load discharging from the study area ranged from 2,800 tons in the winter to 6,400 tons in the spring. The estimate of dissolved solids discharging from the study area annually is 15,700 tons. Water samples collected from selected sites within the Green River agricultural areas were analyzed for naturally occurring isotopes of strontium and boron, which can be useful for differentiating dissolved-solids sources. Substantial variations in the delta strontium-87 and delta boron-11 values among the sites were measured. Canal and river samples had relatively low concentrations of strontium and the most positive (heavier) isotopic ratios, while drains and seeps had a wide range of strontium concentrations and isotopic ratios that generally were less positive (lighter). Further study of the variation in strontium and boron concentrations and isotope ratios may provide a means to distinguish end members and discern processes affecting dissolved solids within the Green River study area; however, the results from isotope data collected during this study are inconclusive. Flow and seepage losses were estimated for the three main canals in the study area for May 2 to October 4 in any given year. This period coincides with the frost-free period in the Green River area. Estimated diversion from the Green River into the Thayn, East Side, and Green River Canals is 6,600, 6,070, and 19,900 acre-feet, respectively. The estimated seepage loss to ground water from the Thayn, East Side, and Green River Canals during the same period is 1,550, 1,460, and 4,710 acre-feet, respectively.

Utah↗

USGS2018

A 30-m landsat-derived cropland extent product of Australia and China using random forest machine learning algorithm on Google Earth Engine cloud computing platform

Mapping high resolution (30-m or better) cropland extent over very large areas such as continents or large countries or regions accurately, precisely, repeatedly, and rapidly is of great importance for addressing the global food and water security challenges. Such cropland extent products capture individual farm fields, small or large, and are crucial for developing accurate higher-level cropland products such as cropping intensities, crop types, crop watering methods (irrigated or rainfed), crop productivity, and crop water productivity. It also brings many challenges that include handling massively large data volumes, computing power, and collecting resource intensive reference training and validation data over complex geographic and political boundaries. Thereby, this study developed a precise and accurate Landsat 30-m derived cropland extent product for two very important, distinct, diverse, and large countries: Australia and China. The study used of eight bands (blue, green, red, NIR, SWIR1, SWIR2, TIR1, and NDVI) of Landsat-8 every 16-day Operational Land Imager (OLI) data for the years 2013–2015. The classification was performed by using a pixel-based supervised random forest (RF) machine learning algorithm (MLA) executed on the Google Earth Engine (GEE) cloud computing platform. Each band was time-composited over 4–6 time-periods over a year using median value for various agro-ecological zones (AEZs) of Australia and China. This resulted in a 32–48-layer mega-file data-cube (MFDC) for each of the AEZs. Reference training and validation data were gathered from: (a) field visits, (b) sub-meter to 5-m very high spatial resolution imagery (VHRI) data, and (c) ancillary sources such as from the National agriculture bureaus. Croplands versus non-croplands knowledge base for training the RF algorithm were derived from MFDC using 958 reference-training samples for Australia and 2130 reference-training samples for China. The resulting 30-m cropland extent product was assessed for accuracies using independent validation samples: 900 for Australia and 1972 for China. The 30-m cropland extent product of Australia showed an overall accuracy of 97.6% with a producer’s accuracy of 98.8% (errors of omissions = 1.2%), and user’s accuracy of 79% (errors of commissions = 21%) for the cropland class. For China, overall accuracies were 94% with a producer’s accuracy of 80% (errors of omissions = 20%), and user’s accuracy of 84.2% (errors of commissions = 15.8%) for cropland class. Total cropland areas of Australia were estimated as 35.1 million hectares and 165.2 million hectares for China. These estimates were higher by 8.6% for Australia and 3.9% for China when compared with the traditionally derived national statistics. The cropland extent product further demonstrated the ability to estimate sub-national cropland areas accurately by providing an R 2 value of 0.85 when compared with province-wise cropland areas of China. The study provides a paradigm-shift on how cropland maps are produced using multi-date remote sensing. These products can be browsed at www.croplands.org and made available for download at NASA’s Land Processes Distributed Active Archive Center (LP DAAC) https://www.lpdaac.usgs.gov/node/1282 .

ISPRS Journal of Photogrammetry and Remote Sensing↗

USGS2016

Temporal trends and stationarity in annual peak flow and peak-flow timing for selected long-term streamflow-gaging stations in or near Montana through water year 2011: Chapter B in Montana StreamStats

A large-scale study by the U.S. Geological Survey, in cooperation with the Montana Department of Transportation and the Montana Department of Natural Resources and Conservation, was done to investigate general patterns in peak-flow temporal trends and stationarity through water year 2011 for 24 long-term streamflow-gaging stations (hereinafter referred to as gaging stations) in Montana. Hereinafter, all years refer to water years; a water year is the 12-month period from October 1 through September 30 and is designated by the year in which it ends. The primary focus of the study was to identify general patterns in peak-flow temporal trends and stationarity that are relevant to application of peak-flow frequency analyses within a statewide gaging-station network. Temporal trends were analyzed for two hydrologic variables: annual peak flow and peak-flow timing. Annual peak flow is the maximum instantaneous discharge, in cubic feet per second, recorded each year a gaging station was operated. Peak-flow timing is the day of the annual peak flow (hereinafter referred to as day of peak), recorded each year a gaging station was operated. Study results provide evidence that annual peak flow for most of the long-term gaging stations can be reasonably considered as stationary for application of peak-flow frequency analyses within a statewide gaging station network. Upward trends in annual peak flow during 1930–76 generally were stronger than downward trends during 1967–2011 for most long-term gaging stations. Statistical distributions of annual peak flow generally were similar among three summary time periods (1930–78, 1979–2011, and the entire period of record). However, for two low-elevation gaging stations in eastern Montana (Poplar River at international boundary [gaging station 06178000] and Powder River at Moorhead, Montana [gaging station 06324500]), substantial downward trends in annual peak flow during 1967–2011 were of similar or stronger magnitude than the upward trends during 1930–76, and the annual-peak-flow medians for 1979–2011 were substantially lower than the medians for the entire period of record. For peak-flow timing for most long-term gaging stations, differences in trends between 1930–76 and 1967–2011 are variable and not particularly strong. Statistical distributions generally are similar among the summary time periods. However, for two high-elevation gaging stations on a Missouri River headwater tributary (Gallatin River near Gallatin Gateway, Montana [gaging station 06043500] and Gallatin River at Logan, Montana [gaging station 06052500]) and for five high-elevation gaging stations in the Yellowstone River Basin (Yellowstone River at Corwin Springs, Montana [gaging station 06191500], Yellowstone River near Livingston, Montana [gaging station 06192500], Clarks Fork Yellowstone River near Belfry, Montana [gaging station 06207500], Clarks Fork Yellowstone River at Edgar, Montana [gaging station 06208500], and Yellowstone River at Billings, Montana [gaging station 06214500]) downward trends in peak-flow timing during 1967–2011 generally were stronger than upward trends during 1930–1976, and day-of-peak medians for 1979–2011 were considerably less than medians for 1930–78. The downward trends in peak-flow timing for 1967–2011 indicate that the timing of annual peak flows changed from later in the year to earlier in the year. For the seven high-elevation gaging stations, the mean change during 1967–2011 was about 13 days (range of 8 to 22 days). For most of the high-elevation gaging stations in the Missouri River headwaters, Yellowstone River Basin, and Columbia River Basin, there was general correspondence between trend patterns for annual peak flow and trend patterns for peak-flow timing; that is, during periods when there were upward trends in annual peak flow, there generally also were upward trends in peak-flow timing. Conversely, during periods when there were downward trends in annual peak flow, there generally also were downward trends in peak-flow timing. The two low-elevation gaging stations in eastern Montana (Poplar River at international boundary [gaging station 06178000] and Powder River at Moorhead, Montana [gaging station 06324500]) had considerable changes in annual-peakflow characteristics after the mid-1970s, which might provide evidence of potential nonstationarity in the peak-flow records. The two low-elevation gaging stations that have potential nonstationarity are located in drainage basins that are strongly affected by agricultural activities that potentially affect the hydrologic regimes. Primary agricultural activities that might alter natural hydrologic conditions include construction of small impoundments (primarily for stock-watering purposes) and irrigation diversions. Temporal variability in these activities might contribute to the potential nonstationarity issues. Changes in climatic characteristics after the mid-1970s also possibly contribute to the potential nonstationarity issues. Lack of considerable indication of potential nonstationarity in annual peak flow for the other long-term gaging stations in this study might indicate that climatic changes have been more pronounced with respect to effects on peak flows in low elevation areas in eastern Montana than in areas represented by the other long-term gaging stations. Another possibility is that climatic changes after the mid-1970s are exacerbated in low-elevation areas where small-impoundment development and potential effects of irrigation diversions might be more extensive.

Montana↗

USGS2014

Spring migration ecology of the mid-continent sandhill crane population with an emphasis on use of the Central Platte River Valley, Nebraska

We conducted a 10-year study (1998–2007) of the Mid-Continent Population (MCP) of sandhill cranes (Grus canadensis) to identify spring-migration corridors, locations of major stopovers, and migration chronology by crane breeding affiliation (western Alaska–Siberia [WA–S], northern Canada–Nunavut [NC–N], west-central Canada–Alaska [WC–A], and east-central Canada–Minnesota [EC–M]). In the Central Platte River Valley (CPRV) of Nebraska, we evaluated factors influencing staging chronology, food habits, fat storage, and habitat use of sandhill cranes. We compared our findings to results from the Platte River Ecology Study conducted during 1978–1980. We determined spring migration corridors used by the breeding affiliations (designated subpopulations for management purposes) by monitoring 169 cranes marked with platform transmitter terminals (PTTs). We also marked and monitored 456 cranes in the CPRV with very high frequency (VHF) transmitters to evaluate length and pattern of stay, habitat use, and movements. An estimated 42% and 58% of cranes staging in the CPRV were greater sandhill cranes (G. c. tabida) and lesser sandhill cranes (G. c. canadensis), and they stayed for an average of 20 and 25 days (2000–2007), respectively. Cranes from the WA–S, NC–N, WC–A, and EC–M affiliations spent an average of 72, 77, 52, and 53 days, respectively, in spring migration of which 28, 23, 24, and 18 days occurred in the CPRV. The majority of the WA–S subpopulation settled in the CPRV apparently because of inadequate habitat to support more birds upstream, although WA–S cranes accounted for >90% of birds staging in the North Platte River Valley. Crane staging duration in the CPRV was negatively correlated with arrival dates; 92% of cranes stayed >7 days. A program of annual mechanical removal of mature stands of woody growth and seedlings that began in the early 1980s primarily in the main channel of the Platte River has allowed distribution of crane roosts to remain relatively stable over the past 2 decades. Most cranes returned to nocturnal roost sites used in previous years. Corn residues dominated the diet of sandhill cranes in the CPRV, as in the 1970s, despite a marked decline in standing crop of corn residues. Only 14% (10 of 74) of PTT-marked migrant cranes stayed at stopovers for ≥5 days before arriving in the CPRV, which limited the contribution of sites south of the CPRV for fat accumulation needed for migration and reproduction. Body masses of cranes (after adjusting for body size [an index of fat]) at arrival in the CPRV varied widely among years (1998–2006), indicating the importance of maintaining productive habitats on the wintering grounds to condition cranes for migration and reproduction. Average rates of fat gain by adult females while in the CPRV remained similar from 1978–1979 to 1998–1999 but declined among males. Distances cranes flew to feeding grounds in the CPRV increased as the percentage of cropland planted to soybeans increased and as density of cranes on nocturnal roosts increased. These results suggest that as habitats of limited or no value to cranes increase on the landscape, more flight time and higher maintenance costs may reduce fat storage. An estimated 40% of diurnal use occurred north of Interstate 80 (I-80) where ≤5% of lands dedicated to crane conservation are located. Seventy-four and 40% of PTT-marked EC–M and WC–A cranes had spring migrations that included staging in eastern South Dakota for an average of 11 and 10 days, respectively. Cranes of the NC–N, WA–S, and WC–A subpopulations staged an average of 25, 17, and 12 days in central and western Saskatchewan/eastern Alberta. Females in these affiliations increased their fat reserves after leaving Nebraska by an estimated 450, 451, and 452 g, respectively, underscoring the key role of these staging areas in preparing the 3 subpopulations for reproduction. After departing Nebraska, MCP cranes roosted primarily in basin wetlands. Most of these wetlands are in private ownership and lack adequate protection, emphasizing the need for effective laws and policies to ensure their long-term protection. The continued success of the current management goal of maintaining the MCP at approximately its current size and providing diverse recreational opportunities over a wide area of midcontinent and western North America is predicated on the ability of MCP cranes to continue to store large fat reserves in the CPRV in advance of breeding. For the CPRV to remain a key fat storage site, active channel maintenance (e.g., clearing of woody vegetation) likely will need to continue, along with establishing minimum stream flows. These actions would help ensure nocturnal roosting habitat remains sufficiently dispersed to provide cranes with daily intake of high-energy food adequate for major fat storage and limit risk of high mortality from storms and disease. Published 2014. This article is a U.S. Government work and is in the public domain in the USA.

Nebraska↗

USGS2014

Porphyry copper assessment of western Central Asia

The U.S. Geological Survey conducted an assessment of resources associated with porphyry copper deposits in the western Central Asia countries of Kyrgyzstan, Uzbekistan, Kazakhstan, and Tajikistan and the southern Urals of Kazakhstan and Russia as part of a global mineral resource assessment. The purpose of the study was to (1) delineate permissive areas (tracts) for undiscovered porphyry copper deposits; (2) compile a database of known porphyry copper deposits and significant prospects; (3) where data permit, estimate numbers of undiscovered deposits within those permissive tracts; and (4) provide probabilistic estimates the amounts of copper (Cu), molybdenum (Mo), gold (Au), and silver (Ag) that could be contained in those undiscovered deposits. Western Central Asia, a region diverse in its geologic complexity, is situated north of the Tarim and North China tectonic blocks and sandwiched between the East European and Siberian cratons. The Ural Mountains form the western margin of the region; the southern margin is formed by the high-standing ranges that make up the Tian Shan mountain range in the border regions of Kazakhstan, Kyrgyzstan, and western China, where the effects of collisional tectonics are well displayed. The tectonic collage that makes up the core of western Central Asia is perhaps the geologically least understood part of the region. There is broad agreement that the early Paleozoic is made up of tectonically juxtaposed blocks that vary from Precambrian-cored microcontinents to magmatic arc and related complexes to subduction-related accretionary complexes. The rudiments of an incipient, contiguous single Kazakhstan block were formed by the end of the Silurian. In the middle to late Paleozoic, the block was unconformably superposed by two large, nested magmatic-arc belts, one Devonian, the other Carboniferous. Both magmatic-arc complexes were folded into a horseshoe-shaped, southeast-opening orocline in response to the final collisions of the various surrounding cratonic blocks with the Kazakhstan block. Additional deformation in the upper Cenozoic derived from the collision of India and China significantly redistributed fragments of the various mosaicked blocks, particularly in the central and southern parts of the western Central Asian region. Porphyry copper deposits are associated with many of the magmatic-arc fragments and belts throughout the geologically complex region, and economically important deposits are found in arc sequences of all Paleozoic Periods. The economically most productive arcs are Carboniferous. The assessment includes a discussion of the tectonic and geologic setting of porphyry copper deposits in western Central Asia (chapter 1), an application of remote sensing data for hydrothermal alteration mapping as a tool for porphyry copper assessment in the region (chapter 2), and a probabilistic assessment of undiscovered porphyry copper resources in four areas that represent Ordovician and Late Paleozoic (Carboniferous-Permian) magmatic arcs (chapter 3). The principal litho-tectonic terrane concept used to delineate permissive tracts was that of a magmatic arc that formed in the subduction boundary zone above a subducting plate. Eight permissive tracts are delineated on the basis of mapped and inferred subsurface distributions of igneous rocks assigned to magmatic arcs of specified age ranges that define areas where the occurrence of porphyry copper deposits within 1 kilometer of the Earth’s surface is possible. These tracts range in area from about 8,000 to 200,000 square kilometers and host 18 known porphyry copper deposits that contain about 54 million metric tons of copper. Available data included geologic maps, the distribution of significant porphyry copper occurrences and potentially related deposit types, the distribution of hydrothermal alteration patterns that are consistent with porphyry copper mineralization, and information on possible subsurface extensions of permissive rocks. On the basis of analyses of these data, the assessment team estimated a mean of 25 undiscovered porphyry copper deposits for the study area. Estimates of numbers of undiscovered deposits were combined with grade and tonnage models in a Monte Carlo simulation to yield a mean estimate of 95 million metric tons of copper in undiscovered porphyry copper deposits; this represents about twice the amount of identified porphyry copper resources (54 million metric tons). Detailed descriptions of each permissive tract, including the rationales for delineation and assessment, are given in appendixes, along with a geographic information system (GIS) that includes permissive tract boundaries, point locations of known porphyry copper deposits and significant occurrences, and hydrothermal alteration data based on analysis of remote sensing data.

Ural Mountains↗

USGS2007

Nature, diversity of deposit types and metallogenic relations of South China

The South China Region is rich in mineral resources and has a wide diversity of deposit types. The region has undergone multiple tectonic and magmatic events and related metallogenic processes throughout the earth history. These tectonic and metallogenic processes were responsible for the formation of the diverse styles of base and precious metal deposits in South China making it one of the resource-rich regions in the world. During the Proterozoic, the South China Craton was characterised by rifting of continental margin before eruption of submarine volcanics and development of platform carbonate rocks, and the formation of VHMS, stratabound copper and MVT deposits. The Phanerozoic metallogeny of South China was related to opening and closing of the Tethyan Ocean involving multiple orogenies by subduction, back-arc rifting, arc-continent collision and post-collisional extension during the Indosinian (Triassic), Yanshanian (Jurassic to Cretaceous) and Himalayan (Tertiary) Orogenies. The Late Palaeozoic was a productive metallogenic period for South China resulting from break-up and rifting of Gondwana. Significant stratabound base and precious metal deposits were formed during the Devonian and Carboniferous (e.g., Fankou and Dabaoshan deposits). These Late Palaeozoic SEDEX-style deposits have been often overprinted by skarn systems associated with Yanshanian magmatism (e.g., Chengmenshan, Dongguashan and Qixiashan). A number of Late Palaeozoic to Early Mesozoic VHMS deposits also developed in the Sanjiang fold belt in the western part of South China (e.g., Laochang and Gacun). South China has significant sedimentary rock-hosted Carlin-like deposits, which occur in the Devonian- to Triassic-aged accretionary wedge or rift basins at the margin of the South China Craton. They are present in a region at the junction of Yunnan, Guizhou, and Guangxi Provinces called the 'Southern Golden Triangle', and are also present in NW Sichuan, Gansu and Shaanxi, in an area known as the 'Northern Golden Triangle' of China. These deposits are mostly epigenetic hydrothermal micron-disseminated gold deposits with associated As, Hg, Sb + Tl mineralisation similar to Carlin-type deposits in USA. The important deposits in the Southern Golden Triangle are Jinfeng (Lannigou), Zimudang, Getang, Yata and Banqi in Guizhou Province, and the Jinya and Gaolong deposits in Guangxi District. The most important deposits in the Northern Golden Triangle are the Dongbeizhai and Qiaoqiaoshang deposits. Many porphyry-related polymetallic copper-lead-zinc and gold skarn deposits occur in South China. These deposits are related to Indosinian (Triassic) and Yanshanian (Jurassic to Cretaceous) magmatism associated with collision of the South China and North China Cratons and westward subduction of the Palaeo-Pacific Plate. Most of these deposits are distributed along the Lower to Middle Yangtze River metallogenic belt. The most significant deposits are Tonglushan, Jilongshan, Fengshandong, Shitouzui and Jiguanzui. Au-(Ag-Mo)-rich porphyry-related Cu-Fe skarn deposits are also present (Chengmenshan and Wushan in Jiangxi Province and Xinqiao, Mashan-Tianmashan, Shizishan and Huangshilaoshan in Anhui Province). The South China fold belt extending from Fujian to Zhejiang Provinces is characterised by well-developed Yanshanian intrusive to subvolcanic rocks associated with porphyry to epithermal type mineralisation and mesothermal vein deposits. The largest porphyry copper deposit in China, Dexing, occurs in Jiangxi Province and is hosted by Yanshanian granodiorite. The high-sulphidation epithermal system occurs at the Zijinshan district in Fujian Province and epithermal to mesothermal vein-type deposits are also found in the Zhejiang Province (e.g., Zhilingtou). Part of Shandong Province is located at the northern margin of the South China Craton and the province has unique world class granite-hosted orogenic gold deposits. Occurrences of Pt-Pd-Ni-Cu-Co are found in Permian

Ore Geology Reviews↗

USGS2003

Geothermal energy: clean power from the Earth's heat

Societies in the 21st century require enormous amounts of energy to drive the machines of commerce and to sustain the lifestyles that many people have come to expect. Today, most of this energy is derived from oil, natural gas, and coal, supplemented by nuclear power. Local exceptions exist, but oil is by far the most common source of energy worldwide. Oil resources, however, are nonrenewable and concentrated in only a few places around the globe, creating uncertainty in long-term supply for many nations. At the time of the Middle East oil embargo of the 1970s, about a third of the United States oil supply was imported, mostly from that region. An interruption in the flow of this import disrupted nearly every citizen’s daily life, as well as the Nation’s economy. In response, the Federal Government launched substantial programs to accelerate development of means to increasingly harness “alternative energies”—primarily biomass, geothermal, solar, and wind. The new emphasis on simultaneously pursuing development of several sources of energy recognized the timeless wisdom found in the proverb of “not putting all eggs in one basket.” This book helps explain the role that geothermal resources can play in helping promote such diversity and in satisfying our Nation’s vast energy needs as we enter a new millennium. For centuries, people have enjoyed the benefits of geothermal energy available at hot springs, but it is only through technological advances made during the 20th century that we can tap this energy source in the subsurface and use it in a variety of ways, including the generation of electricity. Geothermal resources are simply exploitable concentrations of the Earth’s natural heat (thermal energy). The Earth is a bountiful source of thermal energy, continuously producing heat at depth, primarily by the decay of naturally occurring radioactive isotopes—principally of uranium, thorium, and potassium—that occur in small amounts in all rocks. This heat then rises to and through the Earth’s surface, where it escapes into the atmosphere. The amount of heat that flows annually from the Earth into the atmosphere is enormous—equivalent to ten times the annual energy consumption of the United States and more than that needed to power all nations of the world, if it could be fully harnessed. Even if only 1 percent of the thermal energy contained within the uppermost 10 kilometers of our planet could be tapped, this amount would be 500 times that contained in all oil and gas resources of the world. How might we benefit from this vast amount of thermal energy beneath our feet? Where, by what means, and how much of the Earth’s natural heat can be usefully harnessed? These are especially important questions to contemplate, because global population is expected to soon exceed seven billion and many scientists believe that the world’s fossilfuel resources may be substantially depleted within this century. Faced with such prospects, both the public and private sectors are working toward more fully utilizing the Earth’s abundant thermal energy and other alternative energy resources. A skeptic might question the wisdom of devoting much national effort to geothermal energy development, especially because many experts think that geothermal heat can contribute at most about 10 percent to the Nation’s energy supply using current technologies. However, ongoing advances in exploration and heat-extraction technologies are improving our ability to use the resource and may substantially increase the geothermal contribution to the Nation’s energy supply. In an attempt to help national planners and average citizens alike understand the nature and energy potential of geothermal resources, this book (1) describes the distribution and nature of geothermal energy, (2) reviews the common types of geothermal systems that provide useful energy with current technology, (3) considers potential geothermal resources that might someday be tapped with developing technologies, and (4) summarizes the role of earth-science information in assessing and harnessing geothermal resources wherever they occur worldwide. The predecessor to this book (Tapping the Earth’s Natural Heat, U.S. Geological Survey Circular 1125, published in 1994) summarized the situation in the early 1990s. In an effort to support national energy planners, this new circular incorporates more recent advances in geothermal science and technology.

Circular↗

USGS2007

Assessment and management of dead-wood habitat

The Bureau of Land Management (BLM) is in the process of revising its resource management plans for six districts in western and southern Oregon as the result of the settlement of a lawsuit brought by the American Forest Resource Council. A range of management alternatives is being considered and evaluated including at least one that will minimize reserves on O&C lands. In order to develop the bases for evaluating management alternatives, the agency needs to derive a reasonable range of objectives for key issues and resources. Dead-wood habitat for wildlife has been identified as a key resource for which decision-making tools and techniques need to be refined and clarified. Under the Northwest Forest Plan, reserves were to play an important role in providing habitat for species associated with dead wood (U.S. Department of Agriculture Forest Service and U.S. Department of the Interior Bureau of Land Management, 1994). Thus, the BLM needs to: 1) address the question of how dead wood will be provided if reserves are not included as a management strategy in the revised Resource Management Plan, and 2) be able to evaluate the effects of alternative land management approaches. Dead wood has become an increasingly important conservation issue in managed forests, as awareness of its function in providing wildlife habitat and in basic ecological processes has dramatically increased over the last several decades (Laudenslayer et al., 2002). A major concern of forest managers is providing dead wood habitat for terrestrial wildlife. Wildlife in Pacific Northwest forests have evolved with disturbances that create large amounts of dead wood; so, it is not surprising that many species are closely associated with standing (snags) or down, dead wood. In general, the occurrence or abundance of one-quarter to one-third of forest-dwelling vertebrate wildlife species, is strongly associated with availability of suitable dead-wood habitat (Bunnell et al., 1999; Rose et al., 2001). In Oregon and Washington, approximately 150 species of wildlife are reported to use dead wood in forests (O’Neil et al., 2001). Forty-seven sensitive and special-status species are associated with dead wood (Appendix A). These are key species for management consideration because concern over small or declining populations is often related to loss of suitable dead-wood habitat (Marshall et al., 1996). Primary excavators (woodpeckers) also are often the focus of dead-wood management, because they perform keystone functions in forest ecosystems by creating cavities for secondary cavity-nesters (Martin and Eadie, 1999; Aubry and Raley, 2002). A diverse guild of secondary cavity-users (including swallows, bluebirds, several species of ducks and owls, ash-throated flycatcher, flying squirrel, bats, and many other species) is unable to excavate dead wood, and therefore relies on cavities created by woodpeckers for nesting sites. Suitable nest cavities are essential for reproduction, and their availability limits population size (Newton, 1994). Thus, populations of secondary cavity-nesters are tightly linked to the habitat requirements of primary excavators. Although managers often focus on decaying wood as habitat for wildlife, the integral role dead wood plays in ecological processes is an equally important consideration for management. Rose et al. (2001) provide a thorough review of the ecological functions of dead wood in Pacific Northwest forests, briefly summarized here. Decaying wood functions in: soil development and productivity, nutrient cycling, nitrogen fixation, and carbon storage. From ridge tops, to headwater streams, to estuaries and coastal marine ecosystems, decaying wood is fundamental to diverse terrestrial and aquatic food webs. Wildlife species that use dead wood for cover or feeding are linked to these ecosystem processes through a broad array of functional roles, including facilitation of decay and trophic interactions with other organisms (Marcot, 2002; Marcot, 2003). For example, by puncturing bark and fragmenting sapwood, woodpeckers create sites favorable for wood-decaying organisms (Farris et al., 2004), which in turn create habitat for other species and facilitate nutrient cycling. Small mammals that use down wood for cover function in the dispersal of plant seeds and fungal spores (Carey et al., 1999). Resident cavitynesting birds may regulate insect populations by preying on overwintering arthropods (Jackson, 1979; Kroll and Fleet, 1979). These examples illustrate how dead wood not only directly provides habitat for a large number of wildlife species, but also forms the foundation of functional webs that critically influence forest ecosystems (Marcot, 2002; Marcot, 2003). The important and far-reaching implications of management of decaying wood highlight the need for conservation of dead-wood resources in managed forests. Consideration of the key ecological functions of species associated with dead wood can help guide management of dead wood in a framework consistent with the paradigm of ecosystem management (Marcot and Vander Heyden, 2001; Marcot, 2002.) As more information is revealed about the ecological and habitat values of decaying wood, concern has increased over a reduction in the current amounts of dead wood relative to historic levels (Ohmann and Waddell, 2002). Past management practices have tended to severely reduce amounts of dead wood throughout all stages of forest development (Hansen et al., 1991). The large amounts of legacy wood that characterize young post-disturbance forests are not realized in managed stands, because most of the wood volume is removed at harvest for economic and safety reasons. Mid-rotation thinning is used to “salvage” some mortality that might otherwise occur due to suppression, so fewer snags are recruited in mid-seral stages. Harvest rotations of 80 years or less truncate tree size in managed stands, and thus limit the production of large-diameter wood. As a consequence of these practices, dead wood has been reduced by as much as 90% after two rotations of managed Douglas-fir (Rose et al., 2001). Large legacy deadwood is becoming a scarce, critical habitat that will take decades to centuries to replace. Furthermore, management continues to have important direct and indirect effects on the amount and distribution of dead wood in forests. Current guidelines for managing dead wood may be inadequate to maintain habitat for all associated species because they largely focus on a single use of dead wood (nesting habitat) by a small suite of species (cavity-nesting birds), and may under represent the sizes and amounts of dead wood used by many wildlife species (Rose et al., 2001, Wilhere, 2003).

Open-File Report↗

USGS2017

Groundwater flow model for the Little Plover River basin in Wisconsin’s Central Sands

The Little Plover River is a groundwater-fed stream in the sand plains region of central Wisconsin. In this region, sandy sediment deposited during or soon after the last glaciation forms an important unconfined sand and gravel aquifer. This aquifer supplies water for numerous high-capacity irrigation, municipal, and industrial wells that support a thriving agricultural industry. In recent years the addition of many new wells, combined with observed diminished flows in the Little Plover and other nearby rivers, has raised concerns about the impacts of the wells on groundwater levels and on water levels and flows in nearby lakes, streams, and wetlands. Diverse stakeholder groups, including well operators, Growers, environmentalists, local land owners, and regulatory and government officials have sought a better understanding of the local groundwater-surface water system and have a shared desire to balance the water needs of the he liagricultural, industrial, and urban users with the maintenance and protection of groundwater-dependent natural resources. To help address these issues, the Wisconsin Department of Natural Resources requested that the Wisconsin Geological and Natural History Survey and U.S. Geological Survey cooperatively develop a groundwater flow model that could be used to demonstrate the relationships among groundwater, surface water, and well withdrawals and also be a tool for testing and evaluating alternative water management strategies for the central sands region. Because of an abundance of previous studies, data availability, local interest, and existing regulatory constraints the model focuses on the Little Plover River watershed, but the modeling methodology developed during this study can apply to much of the larger central sands of Wisconsin. The Little Plover River groundwater flow model simulates three-dimensional groundwater movement in and around the Little Plover River basin under steady-state and transient conditions. This model explicitly includes all high-capacity wells in the model domain and simulates seasonal variations in recharge and well pumping. The model represents the Little Plover River, and other significant streams and drainage ditches in the model domain, as fully connected to the groundwater system, computes stream base flow resulting from groundwater discharge, and routes the flow along the stream channel. A separate soil-water-balance (SWB) model was used to develop groundwater recharge arrays as input for the groundwater flow model. The SWB model uses topography, soils, land use, and climatic data to estimate recharge as deep drainage from the soil zone. The SWB model explicitly includes recharge originating as irrigation water, and computes irrigation using techniques similar to those used by local irrigation operators. The groundwater flow model uses the U.S. Geological Survey’s MODFLOW modeling code which is freely available, widely accepted, and commonly used by the groundwater community. The groundwater flow model and the SWB model use identical high-resolution numerical grids having model cells 100 feet on a side, with physical properties assigned to each grid cell. This grid allows accurate geographic placement of wells, streams, and other model features. The 3-dimensional grid has three layers; layers 1 and 2 represent the sand and gravel aquifer and layer 3 represents the underlying sandstone. The distribution of material properties in the model (hydraulic conductivity, aquifer thickness, etc.) comes from previous published geologic studies of the region, updated by calibration to recent streamflow and groundwater level data. The SWB model operates on a daily time step. The groundwater flow model was calibrated to monthly stress periods with time steps ranging from 1 to 16 days. More detailed time discretization is possible. The groundwater model was calibrated to water-level and streamflow data collected during 2013 and 2014 by adjusting model parameters (primarily hydraulic conductivity, storage, and recharge) until the model produced a conditionally optimal fit between field observations and model output, subject to consistency with previously published geologic studies. Calibration was performed under both steady and transient conditions, and used a sophisticated parameter-estimation procedure (PEST) for the calibration process and to identify important model parameters. For the Little Plover River, the two most important parameters are the global recharge multiplier and the hydraulic conductivity of the stream bed. The calibrated model produces water-level and mass-balance results that are consistent with field observations and previous studies of the area. The completed model is a powerful tool for testing and demonstrating alternative water-management scenarios. Example model applications described in this report include simulating how the cumulative impacts of pumping and land-use change have affected average baseflow in the Little Plover River. Depletion-potential mapping represents a method for predicting which wells and well locations have the greatest impact on nearby surface-water resources. The completed model is publicly available, along with a companion user’s guide to assist with its operation, at http://wgnhs.org/littleplover- river-groundwater-model.

Wisconsin↗

USGS2011

Distribution of trace metals at Hopewell Furnace National Historic Site, Berks and Chester Counties, Pennsylvania

Hopewell Furnace, located approximately 50 miles northwest of Philadelphia, was a cold-blast, charcoal iron furnace that operated for 113 years (1771 to 1883). The purpose of this study by the U.S. Geological Survey, in cooperation with the National Park Service, was to determine the distribution of trace metals released to the environment from an historical iron smelter at Hopewell Furnace National Historic Site (NHS). Hopewell Furnace used iron ore from local mines that contained abundant magnetite and accessory sulfide minerals enriched in arsenic, cobalt, copper, and other metals. Ore, slag, cast iron furnace products, soil, groundwater, stream base flow, streambed sediment, and benthic macroinvertebrates were sampled for this study. Soil samples analyzed in the laboratory had concentrations of trace metals low enough to meet Pennsylvania Department of Environmental Protection standards for non-residential use. Groundwater samples from the supply well met U.S. Environmental Protection Agency drinking-water regulations. Concentrations of metals in surface-water base flow at the five stream sampling sites were below continuous concentration criteria for protection of aquatic organisms. Concentrations of metals in sediment at the five stream sites were below probable effects level guidelines for protection of aquatic organisms except for copper at site HF-3. Arsenic, copper, lead, zinc, and possibly cobalt were incorporated into the cast iron produced by Hopewell Furnace. Manganese was concentrated in slag along with iron, nickel, and zinc. The soil near the furnace has elevated concentrations of chromium, copper, iron, lead, and zinc compared to background soil concentrations. Concentrations of toxic elements were not present at concentrations of concern in water, soil, or stream sediments, despite being elevated in ore, slag, and cast iron furnace products. The base-flow surface-water samples indicated good overall quality. The five sampled sites generally had low concentrations of nutrients and major ions but had elevated concentrations of iron, manganese, and strontium when compared to sites sampled in adjacent watersheds. The background site on Baptism Creek generally had the lowest concentrations and yields of constituents. Low concentrations of nutrients and major ions at all five sites indicate that measured concentrations can be attributed to general land use and geology and not to point sources. Streambed-sediment sampling results indicated higher concentrations of all metals except nickel at sites on French Creek compared to the background site on Baptism Creek. Concentrations of aluminum, cadmium, and nickel were highest in sediment from the sampling site upstream from Hopewell Furnace. The highest concentrations of arsenic, boron, cobalt, copper, iron, lead, manganese, mercury, and zinc were detected at the site just below Hopewell Furnace, which indicates that the source of these metals may be in Hopewell Furnace NHS. The invertebrate community at the background site on Baptism Creek was dominated by pollution sensitive taxa indicating a healthy, diverse benthic-macroinvertebrate community. Benthic-macroinvertebrate communities at sampling sites on French Creek indicated disturbed communities when compared to the background site on Baptism Creek and that the overall stream quality immediately above and below Hopewell Furnace NHS is degraded. The benthic-macroinvertebrate communities were dominated by pollution-tolerant taxa, and taxa were less diverse than at the background site. Habitat conditions at the upstream site on French Creek were good but were degraded at downstream sites on French Creek. The major habitat issues at these sites were related to a lack of stable substrate, erosion, and deposition. Water quality and streambed-sediment quality do not indicate that the degraded benthic-macroinvertebrate communities are the result of poor water quality. Habitat conditions (erosion and sedimentation) and physical alterations (water temperature) from the outfall of Hopewell Lake are the most likely causes of the impaired communities.

Pennsylvania↗

USGS2024

Identifying transportation data and system needs for a Federal lands transportation data platform

Executive Summary Modern transportation and land-use planning efforts include information from many sources to address topics such as safety, efficiency, commercial, and social needs. This wide breadth of topics provides opportunities for collaboration and development of common tools for diverse users. In many cases, different information systems provide the spatial data and geographic content necessary for transportation and land-use planners to consider multiple lines of evidence. The Federal Highway Administration Office of Federal Lands Highway (FLH) and Federal Land Management Agency partners use detailed spatial and quantitative data to inform transportation decisions. However, logistic challenges to data sharing exist because data are often managed by separate agencies; data-exchange frameworks and interagency data agreements are insufficient; and consistency from aggregated data requires maintenance, coordination, and supporting infrastructure. The FLH and U.S. Geological Survey collaboratively examined (1) use and availability of spatial data for transportation planning and (2) a possible mechanism to use more shared and consistent data in a common planning environment. The goals of this collaborative effort were to describe data needs from the perspective of planners and to identify opportunities for shared data resources. Results presented here focus on two workshops and a subsequent investigation of data and tools available from partner agencies. The objectives of this report are to (1) describe information used in transportation planning with geographic data; (2) identify spatially explicit data that inform transportation plans and could be shared among all partners; and (3) describe current platforms, planning and administrative opportunities, and potential barriers to developing an integrated planning tool. Key information and data needs were identified in three major classes: system, user, and influential factors. System data are parts of the transportation network and information about the condition of individual segments and the network. User data provide details about the function of the system and insights into potential needs; for example, user trips between source and destinations inform road and network demands that can lead to congestion and safety issues (in the future, user data might also include scenarios and projections based on land-use plans). Influential data represent social and environmental factors that influence transit demands and network conditions. These factors could be popular locations or seasonal events that influence demand and congestion; wildlife habitat or migration intersections that affect safety and management priorities; or geologic features that influence hazards, maintenance, and safety. Responses described here provide specific information for web-tool design and give a framework for interagency communication and cooperation to address specific information needs for integrated planning. Existing web-mapping and web-services, and the data that inform them, are also described. Commonly, these data are created and published by one agency, and the core users are outside of that agency; for example, threatened species distributions are published by the U.S. Fish and Wildlife Service for consideration by planners in advance of National Environmental Policy Act (42 U.S.C. 4321 et seq.) evaluation. This report is provided to inform FLH leaders and Federal Land Management Agency partners by articulating user needs and requirements for integrated planning tool(s). Programmers creating a secure web-based data-sharing platform (with data-viewing, -analysis and -download functions) can use the information presented here to organize data and user interfaces. This integrated perspective can help FLH and Federal Land Management Agency partners develop transportation networks that better serve the needs of people in local communities and across States and the Nation.

Open-File Report↗

USGS2018

Promoting synergy in the innovative use of environmental data—Workshop summary

From December 2 to 4, 2015, NatureServe and the U.S. Geological Survey organized and hosted a biodiversity and ecological informatics workshop at the U.S. Department of the Interior in Washington, D.C. The workshop objective was to identify user-driven future directions and areas of collaboration in advanced applications of environmental data applied to forecasting and decision making for the sustainability of biodiversity and ecosystem services. Substantial effort to recruit attendees from diverse Federal, State, and private sector organizations successfully attracted participants from 20 Federal agencies and 48 different institutions in the academic, nonprofit, State government, and commercial sectors; the total number of attendees ranged from 100 to 144 during the 3-day workshop. The first one-half of the workshop was divided into 7 plenary sessions and 3 sets of lightning talk sessions organized by sector, providing 48 oral and visual plenary presentations that shared diverse perspectives on biodiversity and ecological informatics, including original biospatial analyses from 6 graduate student map contest winners. The second one-half of the workshop focused on 10 breakout sessions with participant-driven themes from the environmental data sphere and concluded with an address by the Director of the U.S. Fish and Wildlife Service. The workshop was structured to encourage interactivity. About 80–90 percent of attendees provided direct feedback using clicker devices for specific questions related to biodiversity and ecological data uses and needs, and 10 breakout session leaders shared the highlights of their group discussions during the final workshop plenary sessions. Participants were encouraged to use the Twitter hashtag #ShareUrData. Over lunch on day 2 there were 20 simultaneous presentations of tools and apps during a special “Tools Café” session. The 10 participant-defined breakout session topics are listed below: Ecosystem services and ecological indicators Inventory and monitoring Biogeographic map of the Nation Pollinators Invasive species Remote sensing Drivers of agricultural change Citizen science Climate Hydrology and watersheds Numerous common themes that emerged from the workshop include the following: The vital importance of completing foundational environmental datasets that are nationally consistent and are essential to multiple sectors, such as the Soil Survey Geographic database high-resolution soils data, a minimum 5-meter resolution digital elevation model, national hydrographic data, high-resolution land cover data, time series high-resolution spatial climate data from historical to future time steps, and a national wetland inventory. Improved, nationally consistent environmental datasets (integrated with targeted observations) will dramatically advance forecasting capacity and support early warning systems (that is, drought, forest disease); however, multiagency coordination should focus on decision support tools that convey appropriate actions and responses to adapt to, and mitigate, potential negative consequences. Digitizing and providing access to the vast stores of underused historical data that can be leveraged for this purpose is of national importance. Modern computational techniques and the ever-increasing flow of environmental data from ground and remote observations can support improved understanding of environmental change. Success of understanding patterns of change for decision making requires establishing baselines from which change can be measured. The value of digitized historical data is greater than ever before. There is a need to recognize the multifaceted potential of citizen science to engage the public in resource stewardship, to create the next generation of science, technology, engineering, math, and environmental leaders, and to have sufficient field personnel to monitor environmental trends, including early detection of alien invasive species, phenological shifts, shifting distribution and abundance of indicator species, and species inventories. The Federal government has an essential role in creating the infrastructure to dramatically improve mobilization of citizen science (and other) data by fostering the following: creation of data standards, creation of nationally consistent framework datasets, vertical integration of observation data, visualization and dissemination of aggregated datasets, and calculation and communication of derived trends. Current and near future trends in the availability of remotely sensed data (rapid expansion of satellite fleets and drones) is revolutionizing access to near-real-time ecological data. Targeted integration with ground-based observations and instrumentation has an extremely valuable role in validating remotely sensed data, filling data gaps, improving data quality, and fully realizing the potential of the near-real-time monitoring of environmental indicator trends. Integrated management of environmental data at the landscape scale is required even as specific actions on the ground are largely local in nature. The workshop highlighted numerous success stories; however, almost every breakout group pointed out the still-too-fragmented nature of the current data landscape. Management and delivery of the necessary data, tools, and analyses to sustain our Nation’s environmental capital must be a collaborative effort between Federal, State, and local governments, academia, nonprofits, and the commercial sector, even though the responsibilities of each sector are different.

Open-File Report↗

USGS2006

Final integrated trip report: site visits to Area 50, Andersen Air Force Base, Guam National Wildlife Refuge, War in the Pacific National Historical Park, Guam, Rota and Saipan, CNMI, 2004-2005

Limestone forests are the most diverse natural plant communities of Guam. Like other natural vegetation types, these forests have a long history of anthropogenic disturbances, being altered and shaped by humans for more than 4,000 years. Although this occupation represents a relatively long human influence in comparison to other Pacific islands, animals associated with humans, such as commensal rodents, arrived in these islands beginning only 1,000 years ago, and larger mammals, such as pigs (Sus scrofa), may not have arrived until European contact. Limestone forests, which also occur on several other Mariana Islands, developed in the presence of frequent tropical storms and are therefore well adapted to this type of natural disturbance regime. However, recent human activities including large scale clearing and conversion combined with the presence of high levels of alien herbivores and seed predators, and the loss of ecological services provided by the former native avifauna may be causing the decline of Guam's forests. Limestone forests on northern Guam, much like those of other Mariana Islands, were heavily cleared for the construction of military installations during World War II. The accidental introduction of the Brown Tree Snake (Boiga irregularis; BTS) around this same period subsequently accelerated the disappearance of Guam's native avifauna and other endemic terrestrial vertebrates, and with them, seed dispersal, pollination, and the predatory regulation of herbivorous insects. Guam and the Mariana Islands contained a high proportion (32 pecent) of endemic bird species, with 4 forms endemic to Guam alone: the now extinct Guam Flycatcher (Myiagra freycineti), and Guam Bridled White-eye (Zosterops conspicillatpicillata), one of three island endemic subspecies from the Marianas; Guam rail (Rallus owstonii); and Guam Kingfisher (Todiramphus cinnamominus cinnamominus), an island endemic subspecies of the regionally endemic Micronesian Kingfisher. Guam once supported the Mariana Gallinule (Gallinula chloropus guami), the Mariana Mallard (Anas platyrhynchos oustaleti), Mariana Fruit-Dove (Ptilinopus roseicapilla), White-throated Ground Dove (Gallicolumba xanthonura xanthonura), Mariana Crow (Corvus kubaryi), and the Nightingale Reed-warbler (Acrocephalus luscinia), all endemic to the Mariana Islands. Other regionally endemic endangered species include the Micronesian Megapode (Megapodius laperouse), and the Mariana Swiftlet (Aerodramus bartschi), now reduced to a small population on Guam. Likewise, the flora of Guam is unique, with 21percent of its native vascular plants endemic to the Mariana Islands. In limestone forests of Northern Guam, a number of tall forest tree species such as joga, Elaeocarpus joga (Elaeocarpaceae); pengua or Macaranga thompsonii (Euphorbiaceae); ifit or Intsia bijuga (Fabaceae); seeded breadfruit or Artocarpus marianensis (Moraceae); and umumu or Pisonia grandis (Nyctaginaceae) may be in decline as a result of herbivory by mammals. All show reduced regeneration and age distributions highly skewed towards older individuals. These species provided important habitat for some of Guam's endangered forest birds that remain in captivity such as the Mariana Crow, Guam Kingfisher, and Guam Rail. The recent high frequency of intense tropical storms and herbivory caused by large populations of feral pigs and Philippine sambar deer (Cervus mariannus), as well as invasive alien vines that may suppress tree regeneration, could be permanently altering the structure of regenerating forests and composition of important canopy species on secondary limestone substrates that were cleared and compacted during airfield construction from 1944 through the 1970s. Guam National Wildlife Refuge (GNWR) was established at Ritidian Point, after it was determined to be excess property by the U.S. Navy. Most of the refuge, about 9,087 hectares, is an 'overlay refuge' on lands administered by the U.S. Air Force and U.S. Navy. Although the military mission comes first on these lands, the U.S. Fish and Wildlife Service assists in protecting native species and habitats. The recovery of limestone forest on Guam for forest bird habitat may require intensive management, including reduction of feral herbivores, propagation, out-planting, weed control, and periodic suppression of herbivorous insects. Research to support these techniques may be best accomplished in small areas where potential limiting factors can easily be experimentally manipulated. Area 50, a 24 ha enclosure, contains a relictual patch of relatively undisturbed limestone forest surrounded by tarmac allowing easy access and management opportunities to control alien mammals and snakes. These species have been periodically managed in the past, but recent typhoons have damaged snake-proofing on the enclosure fence. A new concrete barrier is planned to provide more permanent control opportunities within this enclosed area or another similar area, thereby allowing experimental research for various management regimes. Eradication and control of alien vertebrate and plant pests will provide habitat where native communities can be restored in a small, intensively managed area. The stated aim of this project is to "affect ecosystem restoration through the removal and exclusion of introduced species and the reestablishment and propagation of native species, with focus on the reintroduction of native forest bird species." This will be achieved by constructing a multispecies barrier surrounding the area, coordinated eradication of selected alien species within the area, and possible reintroduction of Mariana Crow, Guam Kingfisher, and Guam Rail. This barrier also allows experimental research questions to be addressed within the small enclosure around Area 50 that may be applied to manage and restore the larger areas of limestone forest on northern Guam and also similar forests on other islands of the Marianas.

Open-File Report↗

USGS1999

Surface-water-quality assessment of the Yakima River basin, Washington: Overview of major findings, 1987-91

Surface-water-quality conditions were assessed in the Yakima River Basin, which drains 6,155 square miles of mostly forested, range, and agricultural land in Washington. The Yakima River Basin is one of the most intensively farmed and irrigated areas in the United States, and is often referred to as the “Nation’s Fruitbowl.” Natural and anthropogenic sources of contaminants and flow regulation control water-quality conditions throughout the basin. This report summarizes the spatial and temporal distribution, sources, and implications of the dissolved oxygen, water temperature, pH, suspended sediment, nutrient, organic compound (pesticide), trace element, fecal indicator bacteria, radionuclide, and aquatic ecology data collected during the 1987–91 water years. The Yakima River descends from a water surface altitude of 2,449 feet at the foot of Keechelus Dam to 340 feet at its mouth downstream from Horn Rapids Dam near Richland. The basin can be divided into three distinct river reaches on the basis of its physical characteristics. The upper reach, which drains the Kittitas Valley, has a high gradient, with an average streambed slope of 14 feet per mile (ft/mi) over the 74 miles from the foot of Keechelus Dam (river mile [RM] 214.5) to just upstream from Umtanum. The middle reach, which drains the Mid Valley, extends a distance of 33 miles from Umtanum (RM 140.4) to just upstream from Union Gap and also has a high gradient, with an average streambed slope of 11 ft/mi. The lower reach of the Yakima River drains the Lower Valley and has an average streambed slope of 7 ft/mi over the 107 miles from Union Gap (RM 107.2) to the mouth of the Yakima River. These reaches exhibited differences in water-quality conditions related to the differences in geologic sources of contaminants and land use. Compared with the rest of the basin, the Kittitas Valley and headwaters of the Naches River Subbasin had relatively low concentrations and loads of suspended sediment, nutrients, organic compounds, and fecal indicator bacteria. There were very few failures to meet the Washington State dissolved oxygen standard or exceedances of the water temperature and pH standards in this reach. In general, these areas are considered to be areas of lessdegraded water quality in the basin. The preTertiary metamorphic and intrusive rocks of the Cle Elum and Teanaway River Subbasins, however, were found to be significant geologic sources of antimony, arsenic, chromium, copper, mercury, nickel, selenium, and zinc. As a result, the arsenic, chromium, and nickel concentrations measured in the streambed sediment of the Kittitas Valley were 13 to 74 times higher than those measured in the Lower Valley. The Mid and Lower Valleys had similar water-quality conditions, governed by the intensive agricultural and irrigation activities, highly erosive landscapes, and flow regulation. Most of the failures to meet the Washington State standards for dissolved oxygen and exceedances of the standards for water temperature and pH occurred in the Mid and Lower Valleys. Agricultural drains in the Mid and Lower Valleys were found to be significant sources of nutrients, suspended sediment, pesticides, and fecal indicator bacteria. Downstream from the irrigation diversions near Union Gap, summertime streamflow in the Yakima River was drastically reduced to only a few hundred cubic feet per second. In the lower Yakima River, agricultural return flow typically accounts for as much as 80 percent of the main stem summertime flow near the downstream terminus of the basin. Therefore, the water-quality characteristics of the lower Yakima River resemble those of the agricultural drains. The highest fecal bacteria concentrations (35,000 colonies of Escherichia coli per 100 milliliters of water) were measured in the Granger/Sunnyside area, the location of most of the livestock in the basin. The east side area of the Lower Valley (area east of the Yakima River) was the predominant source area for suspended sediment and pesticides in the basin. This area had the largest acreage of irrigated land and generally received the largest application of pesticides. Owing to the highly erosive soils of the area, the suspended sediment load from the east side in June 1989 (320 kilograms per day) was five or more times larger than from any other area, and the loads of several of the more hydrophobic organic compounds were four or more times larger. An ecological assessment of the Yakima River Basin ranked physical, chemical, and biological conditions at impaired (degraded) sites against reference sites in an effort to understand how land use changes physical and chemical site characteristics and how biota respond to these changes. For this assessment, the basin was divided into four natural ecological categories: (1) Cascades ecoregion, (2) Eastern Cascades Slopes and Foothills ecoregion, (3) Columbia Basin ecoregion, and (4) large rivers. Each of these categories has a unique combination of climate and landscape features that produces a distinctive terrestrial vegetation assemblage. In the combined Cascades and Eastern Cascades site group, which had the fewest impaired sites, the metals index was the only physical and chemical index that indicated any impairment. The moderate levels of impairment noted in the invertebrate and algal communities were not, however, associated with metals, and may have been related to the effects of logging, although the intensity of logging was not directly quantified in this study. Sites in the Columbia Basin site group were all moderately or severely impaired with the exception of the two reference sites (Umtanum Creek and Satus Creek below Dry Creek), which showed no physical, chemical, or biological impairment. Three sites were heavily affected by agriculture (Granger Drain, Moxee Drain, and Spring Creek) and were listed as severely impaired by most of the physical, chemical, and biological condition indices. Agriculture was the primary cause of the impairment of biological communities in this site group. The primary physical and chemical indicators of agricultural effects were nutrients, pesticides, dissolved solids, and substrate embeddedness, which all tended to increase with agricultural intensity. The biological effects of agriculture were manifested by a decrease in the abundance and number of native species of fish and invertebrates, a shift in algal communities to species indicative of eutrophic conditions, and higher abundances. There was also an increase in the abundance and number of nonnative fish species due to the prevalence of fish that are largely tolerant of nutrient-rich conditions. Main stem (large river) sites downstream from the city of Yakima exhibited severe impairment of fish communities associated with high levels of pesticides in fish tissues and the presence of external anomalies on fish.

Washington↗

USGS2001

Geologic studies in Alaska by the U.S. Geological Survey, 1999

The collection of nine papers that follow continue the series of U.S. Geological Survey (USGS) investigative reports in Alaska under the broad umbrella of the geologic sciences. The series presents new and sometimes preliminary findings that are of interest to earth scientists in academia, government, and industry; to land and resource managers; and to the general public. Reports presented in Geologic Studies in Alaska cover a broad spectrum of topics from various parts of the State (fig. 1), serving to emphasize the diversity of USGS efforts to meet the Nation's needs for earth-science information in Alaska. The papers in this volume are organized under the topics: Hazards, Geologic Framework, Environment and Climate, and Resources. This organization is intended to reflect the scope and objectives of USGS geologic programs currently active in Alaska. The two Hazards studies discuss volcano-related topics in the seismically active southcentral Alaska region. The first paper revisits the eruptive events of Redoubt Volcano that occurred more than a decade ago and the subsequent development of the Alaska Volcano Observatory (AVO). This treatise documents the historic impact of this eruption and briefly summarizes the state of our knowledge of the other Cook Inlet, Alaska Peninsula, and Aleutian Island volcanoes. Finally, it discusses the recent role that AVO has had in seismic station installation and hazard assessment at volcanically active sites throughout the world. The second paper discusses the eruptive history of Snowy Mountain in the upper Alaska Peninsula. Because subsets of its 25-30 lava flows erupted as packages in short episodes, calculation of the volcano's lifetime average volumetric eruption rate is problematic. A portion of the cone was hydrothermally weakened and collapsed in the late Holocene producing a 22-km2 debris avalanche. Geologic Framework studies provide background information that is the scientific basis for present and future earth science investigations. The first paper compares and contrasts the Insular-Intermontane suture zone (IISZ) of southeast Alaska with the Adria-Europe suture zone (AESZ) of Switzerland and Hungary. The study develops the hypothesis that the zones have distinct differences as well as similarities and neither is a simple lithotectonic terrane boundary. The second paper discusses the relation among volcanic, glacial, and tectonic activity in the Cold Bay and False Pass 1 :250,000-scale quadrangles on the Alaska Peninsula. During Pleistocene time, continental-shelf glaciations and two massive volcanic centers were the dominant controls over landscape development. The third paper gives detailed geologic information for Paleozoic rocks within the Taylor Mountains D-1 quadrangle portion of the Holitna Lowland of southwestern Alaska. Because of the excellent preservation of megafossils, these Silurian and Ordovician strata lend themselves to detailed statigraphic investigations. Further, low thermal alteration indices of this area have made them a potential target of petroleum exploration. The final report in this section discusses the development of a new spectral enhancement approach for interpreting Multispectral Scanner (MSS) and Thematic Mapper (TM) satellite images. This technique enhances the use of remote sensing data in identifying geologic units in areas that have been poorly investigated. This study used this technique to better define the distribution of a JMtu (mafic, ultramafic, and sedimentary) unit and a PzZrqs (pelitic and quartzitic schist) unit. Environment and climate studies are the emphasis of two papers. One presents the first radiocarbon-dated postglacial vegetation history of the Kenai Mountains of southcentral Alaska. This reconstruction is the result of the analysis of pollen assemblages and peat from sediments collected in Tern Lake and presents a minimum age for deglaciation of these interior valleys at 9,31 0±200 yr B .P. Current vegetation, however, developed within the past ca. 2,500 years. A second study discusses the cycling of arsenic and cadmium in sub-arctic boreal forest ecosystems typical of interior Alaska and defines the importance of various natural (geogenic) sources. The transport and uptake into vegetation of these elements from soils developed from loess as well as soils developed from the major rock units is presented. The bioaccumulation of cadmium in willow (Salix sp.) and its potential consequence to the health of browsing animals is discussed. Papers related to resource issues comprise the topic of the final report. This paper presents a brief statistical summary of the geochemistry of rock samples collected in the east-central portion of the Eagle 1 :250,000-scale quadrangle. This study helps define the rock unit source of both resource- and environmental-based chemical elements of interest in the Fortymile mining district. Two bibliographies at the end of the volume list reports covering Alaska earth science topics in USGS publications during 1999 and reports about Alaska by USGS authors in non-USGS publications during the same period.

Alaska↗

USGS2006

The Amphibian Research and Monitoring Initiative (ARMI): 5-year report

The Amphibian Research and Monitoring Initiative (ARMI) is an innovative, multidisciplinary program that began in 2000 in response to a congressional directive for the Department of the Interior to address the issue of amphibian declines in the United States. ARMI’s formulation was cross-disciplinary, integrating U.S. Geological Survey scientists from Biology, Water, and Geography to develop a course of action (Corn and others, 2005a). The result has been an effective program with diverse, yet complementary, expertise. ARMI’s approach to research and monitoring is multiscale. Detailed investigations focus on a few species at selected local sites throughout the country; monitoring addresses a larger number of species over broader areas (typically, National Parks and National Wildlife Refuges); and inventories to document species occurrence are conducted more extensively across the landscape. Where monitoring is conducted, the emphasis is on an ability to draw statistically defensible conclusions about the status of amphibians. To achieve this objective, ARMI has instituted a monitoring response variable that has nationwide applicability. At research sites, ARMI focuses on studying species/environment interactions, determining causes of observed declines, and developing new techniques to sample populations and analyze data. Results from activities at all scales are provided to scientists, land managers, and policymakers, as appropriate. The ARMI program and the scientists involved contribute significantly to understanding amphibian declines at local, regional, national, and international levels. Within National Parks and National Wildlife Refuges, findings help land managers make decisions applicable to amphibian conservation. For example, the National Park Service (NPS) selected amphibians as a vital sign for several of their monitoring networks, and ARMI scientists provide information and assistance in developing monitoring methods for this NPS effort. At the national level, ARMI has had major exposure at a variety of meetings, including a dedicated symposium at the 2004 joint meetings of the Herpetologists’ League, the American Society of Ichthyologists and Herpetologists, and the Society for the Study of Amphibians and Reptiles. Several principal investigators have brought international exposure to ARMI through venues such as the World Congress of Herpetology in South Africa in 2005 (invited presentation by Dr. Gary Fellers), the Global Amphibian Summit, sponsored by the International Union for Conservation of Nature (IUCN) and Wildlife Conservation International, in Washington, D.C., 2005 (invited participation by Dr. P.S. Corn), and a special issue of the international herpetological journal Alytes focused on ARMI in 2004 (edited by Dr. C.K. Dodd, Jr.). ARMI research and monitoring efforts have addressed at least 7 of the 21 Threatened and Endangered Species listed by the U.S. Fish and Wildlife Service (California red-legged frog [Rana draytonii], Chiricahua leopard frog [R. chiricahuensis], arroyo toad [Bufo californicus], dusky gopher frog [Rana sevosa], mountain yellow-legged frog [R. muscosa], flatwoods salamander [Ambystoma cingulatum], and the golden coqui [Eleutherodactylus jasperi]), and 9 additional species of concern recognized by the IUCN. ARMI investigations have addressed time-sensitive research, such as emerging infectious diseases and effects on amphibians related to natural disasters like wildfire, hurricanes, and debris flows, and the effects of more constant, environmental change, like urban expansion, road development, and the use of pesticides. Over the last 5 years, ARMI has partnered with an extensive list of government, academic, and private entities. These partnerships have been fruitful and have assisted ARMI in developing new field protocols and analytic tools, in using and refining emerging technologies to improve accuracy and efficiency of data handling, in conducting amphibian disease, malformation, and environmental effects research, and in implementing a network of monitoring and research sites. Accomplishments from these endeavors include more than 40 publications on amphibian status and trends, nearly 100 publications on amphibian ecology and causes of declines, and over 30 methodological publications. Several databases have emerged as a result of ARMI and its partnerships; one, a digital atlas of ranges for all U.S. amphibian species, was used by the IUCN to display amphibian distribution maps in the Global Amphibian Assessment Project. Given the scope of ARMI and the panoply of projects, findings have had implications for policy. Investigations that demonstrate amphibian declines or illuminate causes of declines provide valuable information about habitat management, environmental effects, mechanisms for the spread of disease, and human/amphibian interfaces. This information has been made available to land managers, scientists, educators, Congress and other policymakers, and the public. The support afforded ARMI by Congress has been influential in the program’s development and success. The value of ARMI’s efforts will continue to increase as we are able to extend our studies spatially and temporally to answer critical questions with more confidence. We are using ARMI’s resources efficiently and continuing to develop innovative mechanisms for leveraging resources for maximum effectiveness during challenging financial times. This report is a 5-year retrospective of the structure, methodology, progress, and contributions to the broader scientific community that have resulted from this national USGS program. We evaluate ARMI’s success to date, with regard to the challenges faced by the program and the strengths that have emerged. We chart objectives for the next 5 years that build on current accomplishments, highlight areas meriting further research, and direct efforts to overcome existing weaknesses.

Scientific Investigations Report↗