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USGS2025

Foundational uncertainties in terminal Ediacaran chronostratigraphy revealed by high-precision zircon U-Pb geochronology of the Nama Group, Namibia

The Nama Group of southern Namibia and northwestern South Africa hosts the best-dated mixed carbonate-siliciclastic foreland basin succession of the terminal Ediacaran [ca. 551 million years (Ma) ago to <538 Ma] and is key for resolving the chronology of early metazoan evolution. Numerous silicified volcanic tuff interbeds are present, but differing interpretations regarding the fidelity of their ages lead to different regional stratigraphic correlations, especially for the Urusis Formation of the Schwarzrand Subgroup. An expanded record of the Urusis Formation is found in the Swartpunt area of southern Namibia, which has yielded an important metazoan biota. But the succession in this area is preserved as a series of thrusts at the leading edge of the Gariep orogenic belt and zircon U-Pb data show systematic age repetition. We use regional stratigraphic and structural mapping, integrated with carbonate carbon isotope (δ 13 C carb ) chemostratigraphy and high-precision radioisotope U-Pb zircon geochronology from outcrop and recently acquired drill core to develop a temporally calibrated basin-wide depositional model. This integrated dataset either reflects complex zircon reworking, inheritance, or potential analytical biases (Scenario 1) or the presence of a Gariep-related cryptic décollement within the Spitskop Member that has resulted in stratigraphic repetition (Scenario 2). We investigate the evidence for and against both scenarios and consider their implications for stratigraphic and δ 13 C carb correlations between the Swartpunt area and coeval exposures along the Orange River border with South Africa. Given that these issues are in an area that hosts numerous silicified ash beds and extensive exposure, an inability to confidently discount either scenario highlights a level of compounding uncertainty in zircon U-Pb geochronology that must be considered when attempting to build global chronostratigraphic frameworks. Scenario 1 implies that some of the weighted mean ages and Bayesian eruption ages from the Swartpunt area may be >1 Myr older than the depositional age of their respective ash beds when assuming existing stratigraphic correlations. If this scenario is preferred, then a cautious approach would be to consider all weighted mean zircon U-Pb ages from ash beds to reflect maximum depositional ages. Both scenarios support deposition of the Huns Member >540 Ma in the Swartpunt area if the oldest weighted mean age reported here represents a near-depositional age, which has significant implications for the temporal calibration of important terminal Ediacaran ichnofossil assemblages and future cyclostratigraphic studies. Stratigraphic correlations common to both scenarios allow us to temporally calibrate a basin evolution model for the Nama Group. Temporal trends in initial hafnium isotope (εHf) compositions of zircon grains from ash beds throughout the succession may support progressive crustal thickening associated with underplating of the Damara orogenic belt along the northern periphery of the Kalahari craton from ca. 547 Ma to ca. 538 Ma. The compilation of new and published zircon U-Pb ages may also imply that the locus of carbonate platform development migrated from north to south (present co-ordinates), tracking the migration of foredeep subsidence.

Earth-Science Reviews↗
USGS2025

Disparate groundwater responses to wildfire

Post-wildfire investigations of groundwater response reveal a range of outcomes, varying from substantial increases to notable decreases in recharge and baseflow, with some studies indicating negligible or short-lived effects. This review assesses these varied responses within five critical categories: climate, vegetation, hydrogeology, fire characteristics, and the cryosphere, examining both short-term (within 2 years) and intermediate (2–10 years post-fire) effects. Despite considerable variability, some consistent patterns emerge. For instance, in hydroclimatic settings where water input and evaporative demand cycles are out of sync, post-wildfire groundwater responses tend to be positive (i.e., increased flux or storage), whereas under low fire severity conditions or in vegetation types that quickly recover, groundwater responses tend to be negative (i.e., decreased flux or storage). We synthesize relevant findings into a compendium of testable hypotheses aimed at explaining the spatiotemporal variability in observed post-wildfire groundwater responses. A recurring theme is the critical influence of the pre-wildfire groundwater regime on expected response and recovery. We identify opportunities for specific improvements in post-wildfire monitoring and modeling that would further advance capabilities to predict groundwater response. A key area for further research is understanding how wildfire effects on snow dynamics and other cryospheric processes translate to changes in groundwater.

WIREs Water↗
USGS2025

A soil velocity model for improved ground motion simulations in the U. S. Pacific Northwest

Near-surface seismic velocity structure may significantly impact the intensity, duration, and frequency content of ground shaking during an earthquake. In this study, we compile 649 shear wave velocity (Vs) profiles throughout the U.S. Pacific Northwest and southern British Columbia (PNW) and use these measured profiles to develop a representative soil velocity model for four major Holocene soil provinces: Puget Lowlands, Willamette Valley, fill and alluvium, and `other' soils. The resulting soil velocity model shows good agreement to measured data for a wide range of site conditions, with variability between different geologic domains reflecting fundamental differences in depositional environments. We then show that using this regional soil velocity model in simulations of the 2001 M6.8 Nisqually, Washington earthquake improves the fit to observed high-frequency (≥ 0.5 Hz) ground motions in the Puget Sound region compared to simulations that do not incorporate shallow (≤ 200 m) seismic velocity structure. Overall, this work shows that incorporating localized soil velocity profiles into seismic velocity models is important for accurately estimating high-frequency ground motion and regional seismic hazard in earthquake simulations. Future earthquake simulations and hazard studies in the PNW could incorporate these soil velocity profiles to capture the region's distinct site response characteristics.

Washington↗
USGS2026

The eruptive behavior of distributed volcanism forming low shield edifices—A case study of Sentinel-Arlington volcanic field, U.S.A.

Distributed volcanic fields are present in various tectonic settings worldwide, and their characteristics reflect differing influences from magmatic and tectonic processes. In the southwestern United States alone, there are 37 Quaternary distributed volcanic fields. After the primary period of extensional tectonics in the southern Basin and Range 15–5 million years ago, the Sentinel-Arlington volcanic field developed in southwestern Arizona between 4 and 1 million years ago. The Sentinel-Arlington volcanic field consists primarily of low relief shield volcanoes, a type of distributed volcanism with poorly understood temporal evolution. The Sentinel-Arlington volcanic field is less than 200 kilometers (km) from the Colorado Plateau, Gulf of California, and southern San Andreas Fault system. This work identifies and examines controls on the emplacement of the Sentinel-Arlington volcanic field by documenting shallow and surficial structures as well as eruption characteristics and style through time. The Sentinel-Arlington volcanic field consists of 21 volcanoes with a total of 33 vents over an area of about 770 square kilometers (km 2 ). The prominence of low relief shield volcanoes may be explained by ascent of basaltic magmas through thin Basin and Range crust, without much crustal contamination, and low viscosities common to mafic compositions. Typical eruption characteristics involve the construction of low relief shield volcanoes followed by Strombolian fissure eruptions at the summits or near-summit medial areas that produce scoria lapilli, which may weld to form agglomerate. The total lifetime erupted volume of about 4.3 cubic kilometers (km 3 ) represents an average eruptive flux of approximately 2x10 -3 km 3 per thousand years (k.y.). This erupted volume is low relative to Neogene basaltic intraplate distributed volcanic fields worldwide, which typically range from 10 -3 to 1 km 3 k.y. -1 . Sentinel-Arlington volcanic field eruptions were likely triggered by intermittent rejuvenation of transient magmatic zones that exist in thinned crust. Instantaneous flux from point sources feeding the lava flows is estimated to be on the order of 10 -1 to 10 cubic meters per second.

Arizona↗
USGS2024

Turbidite correlation for paleoseismology

Marine turbidite paleoseismology relies on the assumption of synchronous triggering of turbidity currents by earthquake shaking to infer rupture extent and recurrence. Such inference commonly depends on age dating and correlation of the physical stratigraphy of deposits carried by turbidity currents (i.e., turbidites) across great distances. Along the Cascadia subduction zone, which lies offshore the Pacific Northwest, USA, turbidite facies in core photographs, X-ray computed tomography images, and magnetic susceptibility (MS) data exhibit differences in character over relatively short distances, which implies that not all deposits can be correlated with confidence. Thus, subjective correlation based on expected similarity over great distances and weak age constraints does not independently support paleoseismic models. We present a new method for correlating turbidites along the Cascadia margin that can yield a more objective and repeatable stratigraphic framework to underpin earthquake recurrence. We use dynamic time warping to correlate MS logs and measure correlation coefficients of core pairs to evaluate correlation strength. We then compare these measures to a distribution of correlation coefficients of randomly generated turbidite sequences and find that only a small number of core pairs can be correlated more confidently than randomly stacked turbidites. This methodology promises a more robust correlation strategy for future stratigraphic studies.

Oregon, Washington↗
USGS2024

Parameter ESTimation with the Gauss–Levenberg–Marquardt algorithm: An intuitive guide

In this paper, we review the derivation of the Gauss–Levenberg–Marquardt (GLM) algorithm and its extension to ensemble parameter estimation. We explore the use of graphical methods to provide insights into how the algorithm works in practice and discuss the implications of both algorithm tuning parameters and objective function construction in performance. Some insights include understanding the control of both parameter trajectory and step size for GLM as a function of tuning parameters. Furthermore, for the iterative Ensemble Smoother (iES), we discuss the importance of noise on observations and show how iES can cope with non-unique outcomes based on objective function construction. These insights are valuable for modelers using PEST, PEST++, or similar parameter estimation tools.

Groundwater↗
USGS2026

Opportunities for the U.S. Geological Survey’s National Seismic Hazard Model to improve seismic risk assessment of critical infrastructure.

As fragility and risk modeling techniques and computational capabilities evolve, complemented by moving toward more routine and systematic seismic risk assessment of all buildings and critical infrastructure, the authors pose a few critical questions to investigate how the U.S. Geological Survey (USGS) National Seismic Hazard Models (NSHMs) can be used and enhanced further to serve such issues. In this paper, we use three examples from multiple sectors to (1) identify the role of USGS NSHMs in evaluating seismic risks to critical infrastructure, (2) quantify potential impacts from NSHM enhancements (i.e., [i] hazard curves for the vertical component of ground motion, [ii] stochastic event sets, and [iii] maps of probabilistic ground failure hazards), and (3) clarify the feasibility of relevant NSHM improvements. We illuminate that NSHMs are commonly used in location-specific performance assessments, whereas earthquake effects on critical infrastructure can be widespread across large geospatial regions. Further, we found that without the NSHM extensions considered here, risk can be severely underestimated, e.g., neglecting ground failure hazards can underestimate regional loss by a factor of two or more. Although many challenges remain, we developed example prototypes to clarify the feasibility of the NSHM extensions, which can facilitate improved management of risks to critical infrastructure.

Earthquake Spectra Journal↗
USGS2024

Agricultural return flow dynamics on a reach of the East River, Colorado, as assessed by mass balance

The U.S. Geological Survey, in cooperation with the Upper Gunnison River Water Conservancy District, studied historical streamflow in a reach of the East River, Colorado, to gain a preliminary understanding of return flow dynamics. Return flow is agricultural irrigation water that is not consumed by evapotranspiration and instead reaches streams by surface and subsurface flow paths. The study reach had a contributing area of 50 square miles and contained 5.23 square miles of pastures irrigated with water diverted from the East River and its tributaries. By comparing upstream inflows to downstream outflows, the net water balance of the study reach from 1994 to 2023 was assessed. Two general hydrologic conditions for the study reach were identified. One hydrologic condition was characterized by a net loss or consumption of water, termed here as general deficit. This general deficit condition extended about 16 years, from 1997 to 2012. During general deficit years, there was usually a notable net loss of streamflow from April through July, and a small net gain, possibly related to return flows, occurred in August about 75 days after the minimums for losses. The second hydrologic condition was characterized by a net gain of water, termed here as general surplus. This second condition extended about 10 years, from 2014 to 2023. During general surplus years, two separate transitions from net loss to net gain commonly occurred during June through August. Losses during general surplus years were smaller than losses during general deficit years, the respective gains were larger, and times between losses and gains were about 18 and 22 days. Differences between the two hydrologic conditions could reflect interactions among irrigation water, available capacity to store additional shallow groundwater, and streamflow. However, deciphering the causes for the shifts between the two general hydrologic conditions was beyond the scope of this report.

Colorado↗
USGS2024

Testing megathrust rupture models using tsunami deposits

The 26 January 1700 CE Cascadia subduction zone earthquake ruptured much of the plate boundary and generated a tsunami that deposited sand in coastal marshes from northern California to Vancouver Island. Although the depositional record of tsunami inundation is extensive in some of these marshes, few sites have been investigated in enough detail to map the inland extent of sand deposition and depict variability in tsunami deposit thickness and grain size. We collected 129 cores in marshes of the Salmon River estuary in Oregon and reanalyzed 114 core logs from a 1987–88 study that mapped the inland extent of circa 1700 CE sandy tsunami deposits. The ca. 1700 CE tsunami deposit in the Salmon River estuary is easily recognized in cores ≤1 m deep in which a buried marsh peat is overlain by a well sorted sand bed with a sharp lower contact that thins and fines inland. We use tsunami deposit data and models of sandy tsunami sediment transport (using Delft3D-FLOW) to test 15 rupture models that could represent a ca. 1700 CE earthquake. At least 12–16 m of slip offshore of the Salmon River, which results in 0.8–1.0 m of coastal coseismic subsidence, is required to match the ca. 1700 CE sand deposit's inland extent, which is consistent with models of heterogeneous megathrust slip in ca. 1700 CE. Our methods of detailed tsunami deposit mapping, combined with sediment transport modeling, can be used to test models of megathrust ruptures and their tsunamis to potentially improve earthquake and tsunami hazard assessments.

JGR Earth Surface↗
USGS2025

A newly identified creeping strand of the Concord fault, San Francisco Bay Area

The Concord fault constitutes a major branch of the Pacific–North America transform plate boundary in Northern California, bridging the strike‐slip Bartlett Springs ‐ Green Valley Fault system to the north with the Greenville and Calaveras Faults to the south. Like many faults in the San Francisco Bay Area its long‐term slip is partially accommodated by aseismic slip (creep). Although creep has been recognized and monitored on the northern half of the fault for decades, the precise location of the southern half of the fault and its slip rate—whether accommodated seismically or aseismically—has remained enigmatic. How slip transfers between the Concord and Greenville or Calaveras faults to the south remains an outstanding question. New field observations presented here indicate that the active trace of the fault south of downtown Concord is not where previously interpreted and is indeed actively creeping. We report observations of shallow creep continuing >7 km farther south along the Concord fault than previously reported, along a fault strand not previously recognized for most of its length. This is evident as right‐laterally deflected concrete curbs and sidewalk slabs on both sides of every street that crosses the fault at a high angle in southeast Concord and northeast Walnut Creek. We document the magnitude and location of these deflections to estimate accumulated right‐lateral aseismic slip expressed in engineered structures. Offsets of these piercing lines range from 8 to 18 cm, over widths varying from narrow breaks along centimeter‐scale concrete joints to 10‐m‐wide zones of deflection. Significantly, this active trace is ∼400 m west of where the Quaternary active trace has previously been inferred, placing it within—rather than bounding—the built area of suburban Concord. Slip along the fault has already caused infrastructure damage. These results revise our understanding of the southern Concord fault and help constrain its seismic potential.

California↗
USGS2026

Characterizing precariously balanced rocks (PBRs) in the eastern United States for estimating maximum past earthquake ground motions

Fragile geologic features (FGFs) can be used to estimate an upper bound to the strength of earthquake ground shaking in the past thousands to tens of thousands of years. FGFs could be especially useful in the eastern United States, where few active faults are available for paleoseismic studies and where low seismic attenuation means that an earthquake could damage FGFs at large distances. This article describes a pilot study of one form of FGF, precariously balanced rocks (PBRs), in the Blue Ridge of Virginia, ∼160 km from the central Virginia seismic zone (CVSZ) and ∼100 km from Virginia’s Giles County seismic zone (GCSZ). The main goal is to develop and refine methods for studying PBRs in the eastern United States. Photogrammetric 3D models of the rocks were used to locate their centers of mass and delineate their basal contacts, with the latter corroborated by wrapping a wire around the bases to verify the circumferences. Relations between hill geometry and amplification were used to estimate topographic amplification. Seismometers on the PBRs provided the frequencies, amplitudes, and directions of rocking after giving the rocks gentle pushes. The levels of ground shaking likely to topple the rocks were compared with the median hazard curves from the U.S. Geological Survey’s National Seismic Hazard Model and were used to map magnitudes of earthquakes in the nearby region likely to topple the rocks. Results indicate that an M w ≥ 7.5 earthquake is needed in the CVSZ or near the 2020 Sparta, North Carolina, earthquake to topple the two most fragile PBRs and that an earthquake of ~ M w 7–7.5 in the GCSZ is needed. The fragilities and estimated ages of the PBRs (20–40 ka) are thus consistent with the absence of such events in the historical record in the nearby region.

eastern United States↗
USGS2026

Compact seismicity bursts have different characteristics from regional seismicity

Earthquakes tend to cluster, developing into sequences driven by stress perturbations and transient fault-zone processes. Depending on the driving process, earthquake sequences show differing behaviors. This variability challenges our ability to observe or distinguish these driving processes in high resolution. Here we systematically identify seismicity bursts throughout southern California using new statistical methods and examine their causes with other independent geophysical observations. Seismicity bursts are defined as statistically significant seismicity rate anomalies. Our approach has the advantage of being data driven, depending on few earthquake occurrence assumptions. We find abundant seismicity bursts across southern California, most frequently occurring along the San Jacinto Fault and in the Salton Sea and Coso geothermal fields. These seismicity bursts are highly compact in space and time, often encompassed by a 5 km radius and have durations less than 10 hr. Many of the seismicity bursts have their largest earthquake near the beginning of the sequence, but the largest earthquake is usually not an obvious mainshock. We utilize a variety of independent geophysical data sets to analyze the characteristics of the seismicity bursts, finding that the seismicity bursts have low b-values, low spectral stress drops, and varied stress ratios compared to regional seismicity. These differences suggest that seismicity bursts are driven by transient processes acting frequently across fault networks.

California↗
USGS2025

Groundwater budget for the surficial aquifer surrounding Lake Nokomis, Minneapolis, Minnesota

During prolonged periods of above-average precipitation, rising groundwater levels have the potential to cause damage to and interfere with underground infrastructure and building foundations. To understand the relations between precipitation and groundwater in the vicinity of Lake Nokomis, the U.S. Geological Survey, in collaboration with the University of Minnesota, quantified five components of the groundwater budget: groundwater recharge, change in surficial aquifer storage, surficial aquifer groundwater discharge to Lake Nokomis, groundwater evapotranspiration, and groundwater discharge to underlying bedrock aquifers. Field data, geologic records, and empirical calculation methods were used to quantify groundwater budget components for April 2023 through April 2024. Lake water budget data indicate that Lake Nokomis is a flowthrough system during periods with no outflow through the weir, with groundwater inputs equal to outputs. Roughly 40 percent of precipitation that fell in the study area was added to the surficial aquifer as recharge. Uncertainty in the vertical hydraulic conductivity resulted in wide-ranging estimates (spanning three orders of magnitude) of water discharging from the surficial aquifer to the underlying bedrock aquifer. Drought conditions persisted for the duration of this study and were not representative of the conditions that motivated this study. This study is a start towards understanding relations between precipitation, Lake Nokomis levels, and groundwater levels that could affect local underground infrastructure.

Minnesota↗
USGS2026

Computation of regional groundwater budgets for the Virginia Coastal Plain aquifer system

Computation of detailed groundwater flow budgets for subdivisions of the Virginia Coastal Plain aquifer system has enabled quantification and more thorough understanding of groundwater flow within this important water resource. A zone budget analysis based on previously published groundwater models of the Virginia Coastal Plain and Virginia Eastern Shore indicates that groundwater conditions vary substantially throughout the Coastal Plain aquifer system because of local variations in hydrogeology and historical and ongoing variations in groundwater use and management. Decades of substantial groundwater withdrawal from the Coastal Plain aquifer system have altered groundwater flow from predevelopment conditions. Rates of sustainable withdrawal are limited because the downward groundwater flow rate into confined aquifers is a relatively small part of the total groundwater budget for the aquifer system compared to the rate of recharge at the land surface. Analyses of groundwater budgets from the Virginia Coastal Plain model indicate that groundwater flow is generally outward from the surficial aquifer to rivers and coastal waterbodies and downward through a series of underlying aquifers and confining units to the Potomac aquifer, which is the deepest aquifer and the source of most groundwater withdrawals. Downward flow into the Potomac aquifer is estimated to be only 7 percent of total net precipitation-derived net recharge at the land surface but makes up about 66 percent of inflow to the aquifer in Virginia, with much of the remaining inflow occurring laterally from outside of defined groundwater budget regions in Virginia. For several decades prior to 2010, high rates of withdrawal from the Potomac aquifer resulted in substantial decline in groundwater storage in the aquifer and in most overlying aquifers and confining units. From 2010 to 2023, rates of withdrawal substantially lower than the historical maximum resulted in small net increases in groundwater storage in the confined aquifer system for most regions of the Virginia Coastal Plain. Nevertheless, for the same period, groundwater storage for the entire model domain continues to incrementally decline, indicating that storage recovery in Virginia is offset by a continued decrease in storage in areas beneath the Chesapeake Bay or adjacent areas of Maryland and North Carolina. Withdrawals from the Potomac aquifer have induced substantial downward flow which is a large part of groundwater budgets for confined aquifers such as the Potomac. For the most recent simulated conditions (2023) downward groundwater flow continues, but because vertical flow rates are a function of the difference between water pressure in the upper surficial systems and lower confined units, rates of downward flow are lower than those in earlier decades as the confined water levels partially recover from larger groundwater withdrawals in the past. Geographically, groundwater flow is generally inward from perimeter regions of the Virginia Coastal Plain toward central regions with the largest withdrawal rates. Groundwater inflow from coastal regions could be contributing to saltwater intrusion, even though that was not measured in this study. Analyses of groundwater budgets from the Virginia Eastern Shore peninsula, a geographic region of the Virginia Coastal Plain, indicate that groundwater flow for that isolated aquifer system is generally outward from the surficial aquifer to coastal water bodies and downward into the confined Yorktown-Eastover aquifer system, which is the source of most withdrawals. Downward groundwater flow into the confined Yorktown-Eastover aquifer system is estimated to be less than 2 percent of total recharge and less than 9 percent of net recharge at the water table but makes up more than 93 percent of all inflow to the confined aquifer system. Decades of substantial but relatively consistent groundwater withdrawals have induced greater downward flow rates into the confined aquifer system but also have resulted in loss of groundwater from storage. For the most recent simulated period (2023), estimated storage loss accounts for slightly under 7 percent of withdrawals from the confined aquifer system. The reported withdrawal rate for this period from the confined Yorktown-Eastover system is near the highest reported rate for the Virginia Eastern Shore, which means that the storage depletion is expected to continue, even though groundwater levels appear to be relatively stable. Estimated groundwater flow rates upward from the confining unit underlying the Yorktown-Eastover system and low rates of inflow from coastal water bodies underscore ongoing concerns about up-coning and lateral intrusion of salty groundwater.

Virginia↗
USGS2025

Exploration for blind geothermal systems in the eastern Great Basin of Utah: An update on the “Lund North” INGENIOUS detailed study site

Existing geothermal production in Utah is commonly collocated with surficial expressions of geothermal heat including active hot springs and hot spring deposits. However, geothermal potential across the Great Basin region is thought to be much higher for hidden or blind geothermal systems. Accordingly, exploration techniques that can locate geothermal resources that lack surface thermal features could support future development of these systems. The goal of the INGENIOUS project is to reduce exploration risk and discover new, economically viable hidden geothermal systems in the Great Basin region. This paper summarizes the efforts and preliminary results of blind geothermal resource prospecting in Utah as part of the larger INGENIOUS project. The Lund North site in the Basin and Range province of southwest Utah was designated as the fourth detailed study site for the project. The site was initially identified from the preliminary Play Fairway Analysis (PFA) geothermal favorability map, which is based on various data elements, and the identification of favorable structural settings across Utah. This site contains existing legacy data including a thermal gradient borehole with a heat-flow value exceeding 220 mW/m 2 . New data collected at this site include terrestrial gravity, magnetotellurics, transient electromagnetics, fluid geochemistry, geologic mapping, UAV-based lidar, paleomagnetism, aeromagnetic surveys, and a shallow temperature survey. Preliminary data and model interpretations corroborate the presence of a large, east-dipping, northeast-southwest-trending normal fault on the edge of a typical Basin and Range graben. Quaternary fault mapping refined by high-resolution lidar surveys suggests a complex step over fault geometry. Utilizing multi-disciplinary datasets for further site assessment at Lund North will facilitate the development of a local-scale PFA and geothermal conceptual model. This new data will be used to site successive thermal gradient drilling to verify heat flow with temperatures at depth at the Lund North site and further investigate the existence of a local geothermal system.

Utah↗
USGS2025

Extremophile hotspots linked to containerized industrial waste dumping in a deep-sea basin

Decaying barrels on the seafloor linked to DDT contamination have raised concerns about the public health implications of decades old industrial waste dumped off the coast of Los Angeles. To explore their contents, we collected sediment cores perpendicular to five deep-sea barrels. The concentration of DDT and its breakdown products were highly elevated relative to control sites yet did not vary with distance from the barrels, suggesting that they were not associated with the contamination. Sediment cores collected through white halos surrounding three barrels were enriched in calcite and had elevated pH. The associated microbial communities were low diversity and dominated by alkalophilic bacteria with metagenome-assembled genomes adapted to high pH. A solid concretion sampled between a white halo and barrel was composed of brucite, a magnesium hydroxide mineral that forms at high pH. Based on these findings, we postulate that leakage of containerized alkaline waste triggered the formation of mineral concretions that are slowly dissolving and raising the pH of the surrounding sediment pore water. This selects for taxa adapted to extreme alkalinity and drives the precipitation of “anthropogenic” carbonates forming white halos, which serve as a visual identifier of barrels that contained alkaline waste. Remarkably, containerized alkaline waste discarded >50 years ago represents a persistent pollutant creating localized mineral formations and microbial communities that resemble those observed at some hydrothermal systems. These formations were observed at one-third of the visually identified barrels in the San Pedro Basin and have unforeseen, long-term consequences for benthic communities in the region.

California↗
USGS2026

Transcriptional changes in wild Yukon River Chinook Salmon associated with Ichthyophonus infections

Objective We compared differentially expressed genes in Chinook Salmon Oncorhynchus tshawytscha with three divergent Ichthyophonus statuses (undetected, subclinical infections, or clinical disease; n = 100) to investigate associated transcriptomic responses. Disease associated with the fish parasite Ichthyophonus sp. was first diagnosed in adult Chinook Salmon from the Yukon River in the late 1980s and has subsequently been implicated in premature host mortality. Methods Chinook Salmon tissue sample collections and Ichthyophonus infection data were leveraged from a multi-agency collaboration during summer 2022 at three locations along the main-stem Yukon River that spanned nearly 2,000 km of freshwater migration (lower, middle, and upper river). We sequenced the transcriptome and compared this to infection status based on routine diagnostic procedures. Results Among the 17,569 genes for which messenger RNA was detected, we identified a transcription signature in the skeletal muscle that was associated with Ichthyophonus infections and included 53 differentially expressed genes. The differentially expressed genes and their pathways included those known for involvement in immune functions, energy synthesis, cellular breakdown, and reproduction—all processes that are known to be influenced by senescence during spawning migrations. Conclusions Results demonstrate a clear transcriptional difference between diseased fish (clinical disease group) and those in which Ichthyophonus was undetected, including identifying candidate markers for infection in this population. These results provide a foundation for development of nonlethal biomarkers to evaluate potential Ichthyophonus infections in Chinook Salmon based on gene transcription, protein products, or gene variants (e.g., polymorphisms).

Journal of Aquatic Animal Health↗
USGS2026

Advancing outreach effectiveness to improve conservation practice adoption

Agricultural conservation practices are central to achieving Chesapeake Bay watershed restoration goals, yet long-term adoption remains challenging even when practices are technically effective and financial assistance is available. Adoption is not a single decision, but a staged and context-dependent process. Awareness and willingness to commitment, implementation, and persistence, are all important. Progress along this pathway is influenced by interacting factors such as knowledge, attitudes, beliefs, social norms, trust, perceived risk, farm characteristics, and practical constraints. Improving adoption requires outreach strategies that respond to the specific factors limiting progress at each stage rather than relying on a one-size-fits-all approach.

Chesapeake Bay watershed↗