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Herons and egrets as proposed indicators of estuarine contamination in the United States

The National Contaminant Biomonitoring Program of the U.S. Fish and Wildlife Service Includes the sampling of freshwater fish, starlings, and duck wings. In order to include an estuarine component, herons and egrets are being evaluated. Organochlorine concentrations were measured In eggs and chicks of Snowy Egrets Egretta thula, Great Egrets Casmerodius albus, and Black-crowned Night-Herons Nycticorax nycticorax collected In Rhode Island, Texas, and California. Chicks of all species at all locations accumulated DDE and polychlorinated biphenyls (PCBs), and accumulation rates may serve as the basis for an indicator program of estuarine contamination. Biochemical re-sponses of embryos and chicks were also evaluated. Microsomal arylhydrocarbon hydroxylase and benzyloxyresorufin-O-dealkylase activities in livers of 10-day-old night-heron chicks were elevated at a contaminated site in San Francisco Bay, CA, when compared to a 'reference' site in Vlrginia. Quantification of liver enzyme activities may serve as a rapid cost-effective biomarker of pollutant exposure.

Book chapter

Sonoran Pronghorn Literature: An Annotated Bibliography

EXECUTIVE SUMMARY The Sonoran pronghorn (Antilocapra americana sonoriensis) is 1 of 5 subspecies of pronghorn in North America. Sonoran pronghorn historically ranged from eastern California into southeastern Arizona and south to Sonora, Mexico. Sonoran pronghorn currently inhabit the Sonoran Desert in Southwestern Arizona and northern Sonora, Mexico. Unfortunately, their future in North America is uncertain. In the United States, as of December 2004, there were <51 freeranging individual Sonoran pronghorn. This subspecies has been listed as endangered by the United States Fish and Wildlife Service since 1967. Because of the rapid decline in population size, biologists and managers increased management efforts to reverse the downward spiral to extinction. To assist with enhanced management we have compiled an annotated bibliography of most of the works published on Sonoran pronghorn including peer-reviewed papers (n = 31, including submitted manuscripts), books (n = 26), theses and dissertations (n = 5), conferences, proceedings and symposiums (n = 31), reports (n = 84), abstracts (n = 14), popular articles (n = 41), and others (n = 4). These are the same categories under which we list annotations. Most of the articles involve A. a. sonoriensis. We present the scientific name of other pronghorn when clarification is needed.

Open-File Report

Selenium

Selenium (Se) was discovered in 1817 in pyrite from copper mines in Sweden. It is a trace element in Earth’s crust, with an abundance of three to seven orders of magnitude less than the major rock-forming elements. Commercial use of selenium began in the United States in 1910, when it was used as a pigment for paints, ceramic glazes, and red glass. Since that time, it has had many other economic uses—notably, in the 1930s and 1940s, when it was used in rectifiers (which change alternating current to direct current), and in the 1960s, when it began to be used in the liner of photocopier drums. In the 21st century, other compounds have replaced selenium in these older products; modern uses for selenium include energy-efficient windows that limit heat transfer and thin-film photovoltaic cells that convert solar energy into electricity. In Earth’s crust, selenium is found as selenide minerals, selenate and selenite salts, and as substitution for sulfur in sulfide minerals. It is the sulfide minerals, most commonly those in porphyry copper deposits, that provide the bulk of the selenium produced for the international commodity market. Selenium is obtained as a byproduct of copper refining and recovered from the anode slimes generated in electrolytic production of copper. Because of this, the countries that have the largest resources and (or) reserves of copper also have the largest resources and (or) reserves of selenium. Because selenium occurs naturally in Earth’s crust, its presence in air, water, and soil results from both geologic reactions and human activity. Selenium is found concentrated naturally in soils that overlie bedrock with high selenium concentrations. Selenium mining, processing, use in industrial and agricultural applications, and disposal may all contribute selenium to the environment. A well-known case of selenium contamination from agricultural practices was discovered in 1983 in the Kesterson National Wildlife Refuge in California. There, waters draining from agricultural fields created wetlands with high concentrations of dissolved selenium in the water. The selenium was taken up by aquatic wildlife and caused massive numbers of embryonic deformities and deaths. Regulatory agencies have since worked to safeguard ecological and human health by creating environmental exposure guidelines based upon selenium concentrations in water and in fish tissue. Any attempt to regulate selenium concentrations requires a delicate balance because selenium occurs naturally and is also a vital nutrient for the health of wildlife, domestic stock, and humans. Selenium is commonly added as a vitamin to animal feed, and in some regions of the United States and the world, it is added as an amendment to soils for uptake by agricultural crops. The important role of selenium in economic products, energy supply, agriculture, and health will continue for well into the future. The challenge to society is to balance the benefits of selenium use with the environmental consequences of its extraction. Increased understanding of the elemental cycle of selenium in the earth may lead to new (or unconventional) sources of selenium, the discovery of new methods of extraction, and new technologies for minimizing the transfer of selenium from rock to biota, so to protect environmental and human health.

Professional Paper

A hierarchical integrated population model for greater sage-grouse ( Centrocercus urophasianus ) in the Bi-State Distinct Population Segment, California and Nevada

Greater sage-grouse ( Centrocercus urophasianus , hereafter referred to as “sage-grouse”) are endemic to sagebrush ( Artemisia spp.) ecosystems throughout Western North America. Populations of sage-grouse have declined in distribution and abundance across the range of the species (Schroeder and others, 2004; Knick and Connelly, 2011), largely as a result of human disruption of sagebrush communities (Knick and Connelly, 2011). The Bi-State Distinct Population Segment (DPS) represents sage-grouse populations that are geographically isolated and genetically distinct (Benedict and others, 2003; Oyler-McCance and others, 2005) and that are present at the extreme southwestern distribution of the sage-grouse range (Schroeder and others, 2004), straddling the border of California and Nevada. Subpopulations of sage-grouse in the DPS may be at increased risk of extirpation because of a substantial loss of sagebrush habitat and lack of connectivity (Oyler-McCance and others, 2005). Sage-grouse in the Bi-State DPS represent small, localized breeding populations distributed across 18,325 km 2 . The U.S. Fish and Wildlife Service currently (2014) is evaluating the Bi-State DPS as threatened or endangered under the Endangered Species Act of 1973, independent of other sage-grouse populations. This DPS was designated as a higher priority for listing than sage-grouse in other parts of the species’ range (U.S. Department of the Interior, 2010). Range-wide population analyses for sage-grouse have included portions of the Bi-State DPS (Sage and Columbian Sharp-tailed Grouse Technical Committee 2008; Garton and others, 2011). Although these analyses are informative, the underlying data only represent a portion of the DPS and are comprised of lek count observations only. A thorough examination of population dynamics and persistence that includes multiple subpopulations and represents the majority of the DPS is largely lacking. Furthermore, fundamental information on population growth rate (i.e., finite rate of change, λ) and specific demographic parameters that explain sources of variation in λ within different subpopulations would be valuable for making conservation and management decisions for this DPS. During 2003–12, agencies and universities collaborated to conduct extensive monitoring of sage-grouse populations within the Bi-State DPS. Data regarding lek attendance, movement, and survival of sage-grouse across multiple life stages were documented. Specifically, sage-grouse from nearly all subpopulations were marked and tracked across multiple seasons using radio-telemetry techniques. A hierarchical integrated population modeling (IPM) approach was used to derive demographic parameters for the Bi-State DPS using the large amount of data collected over a 10-year period. This modeling approach allows integration of multiple data sources to inform population growth rates and population vital rates for the Bi-State DPS overall, as well as for individual subpopulations. These models are more informative than other models because they integrate inputs of demographic data (for example, survival and fecundity rates) and survey data (for example, lek observations). The findings here will help characterize population growth rates within the Bi-State DPS.

California;Nevada

Comparative demography of sea otter populations

Population trends are poorly documented and demographic information is typically lacking for many carnivorous mammals. The sea otter ( Enhydru lutris ) has a well known history of decline and recovery, and while many other species have declined as precipitously, few have recovered so spectacularly. Generally speaking, northern populations (remnants within the range of E. l. lutris and E. l. kenyoni ) have recovered at high rates while recovery of the southern sea olter ( E. I. nereis ), which is listed as legally threatened under the Endangered Species Act (ESA), has progressed more slowly. Our purpose is to contrast trends in abundance and demographic patterns between Southern California and northern (Washington, British Columbia, Alaska, and Asia) sea otter populations. Specifically, we provide (1) a brief review of the main findings to date: (2) a summary of ongoing and planned studies; and (3) recommendations for future research. A more detailed account of these and other issues concerning the conservation and management of sea otters is provided in the U.S. Fish and Wildlife Service's Recovery Plan for the Califomia Sea Otter (U.S. Fish and Wildlife Service 1996).

Endangered Species UPDATE

Effects of wildlife of ethyl and methyl parathion applied to California USA rice fields

Selected rice fields on the Sacramento National Wildlife Refuge Complex were aerially sprayed one time during May or June 1982 with either ethyl (0.11 kg Al/ha) or methyl (0.84 kg AI/ha) parathion for control of tadpole shrimp, Triops longicaudatus. No sick or dead vertebrate wildlife were found or adjacent to the treated rice fields after spraying. Specimens of the following birds and mammals were assayed for brain cholinesterase (ChE) activity to determine exposure to either form of parathion; house mouse, Mus musculus; black-tailed jackrabbit, Lepus californicus; mallard, Anas platyrhynchos; ring-necked pheasant, Phasianus colchicus; American coot, Fulica americana; and red-winged blackbird, Agelaius phoeniceus. Both mice and pheasants from methyl parathion-treated fields had overall mean ChE activities that were significantly (P < 0.05) inhibited compared with controls, and 7, 40, 54 and 57% of individual blackbirds, pheasant, mice, and coots, respectively, had inhibited brain ChE activities (i.e., less than -2 SD of control mean). Although no overall species effect was detected for ethyl parathoid treatment, pheasants (43%), coots (33%), and mice (37%) had significantly inhibited brain ChE activities. Neither of the parathion treatment appeared acutely hazardous to wildlife in or adjacent to rice fields, but sufficient information on potential hazards was obtained to warrant caution in use of these chemicals, especially methyl parathion, in rice fields.

California Fish and Game

Effects on wildlife of ethyl and methyl parathion applied to California rice fields

Selected rice fields on the Sacramento National Wildlife Refuge Complex were aerially sprayed one time during May or June 1982 with either ethyl (0.11 kg Al/ha) or methyl (0.84 kg AI/ha) parathion for control of tadpole shrimp, Triops longicaudatus . No sick or dead vertebrate wildlife were found or adjacent to the treated rice fields after spraying. Specimens of the following birds and mammals were assayed for brain cholinesterase (ChE) activity to determine exposure to either form of parathion; house mouse, Mus musculus ; black-tailed jackrabbit, Lepus californicus ; mallard, Anas platyrhynchos ; ring-necked pheasant, Phasianus colchicus ; American coot, Fulica americana ; and red-winged blackbird, Agelaius phoeniceus . Both mice and pheasants from methyl parathion-treated fields had overall mean ChE activities that were significantly (P < 0.05) inhibited compared with controls, and 7, 40, 54 and 57% of individual blackbirds, pheasant, mice, and coots, respectively, had inhibited brain ChE activities (i.e., less than -2 SD of control mean). Although no overall species effect was detected for ethyl parathoid treatment, pheasants (43%), coots (33%), and mice (37%) had significantly inhibited brain ChE activities. Neither of the parathion treatment appeared acutely hazardous to wildlife in or adjacent to rice fields, but sufficient information on potential hazards was obtained to warrant caution in use of these chemicals, especially methyl parathion, in rice fields.

California

Hydrologic monitoring networks in the Death Valley Regional Flow System, Nye County, Nevada and Inyo County, California

Introduction Water is an important resource in the arid southwest region of the United States where there is a limited supply of surface water and groundwater. In the Death Valley regional groundwater flow system (DVRFS) in southern Nevada and eastern California, groundwater is the main source of supply for agricultural, commercial, and domestic water needs. For over four decades, the United States Geological Survey (USGS) Nevada Water Science Center (NVWSC) has assisted environmental programs with the collection of hydrologic information within the DVRFS. Three hydrologic networks, managed in cooperation with local (Nye County, Nev., and Inyo County, Calif.) and federal (Bureau of Land Management, Fish and Wildlife Service, National Park Service, U.S. Department of Energy National Nuclear Security Administration) agencies, are used to actively monitor wells and springs in the region.

California, Nevada

Effects of wastewater discharges on endocrine and reproductive function of Western Mosquitofish (Gambusia spp.) and implications for the threatened Santa Ana Sucker (Catostomus santaanae)

The Santa Ana River (SAR) in southern California is impacted by effluents from wastewater treatment plants (WWTP), which are sources of organic wastewater compounds (OWCs) and urban runoff. The Santa Ana River is one of only three river basins supporting native populations of the federally listed Santa Ana sucker ( Catostomus santaanae ) at the time the fish was included on the list 2000. In 2004 and 2005, a U.S. Geological Survey and U.S. Fish and Wildlife Service study was undertaken to determine if the threatened Santa Ana sucker was potentially exposed to OWCs and endocrine disrupting compounds (EDCs) in the SAR by using the western mosquitofish ( Gambusia affinis ) as a surrogate fish model. Four Santa Ana River sites were chosen along a gradient of proximity to WWTP effluents: (1) a point source of tertiary treated wastewater effluent (TTWE), (2) Rialto Drain (just below a WWTP), (3) Prado Dam (11 kilometers [km] below WWTPs), and (4) Sunnyslope Creek (no WWTP but having urban runoff influence). A reference site having no WWTPs or urban runoff, Thousand Palms, was also sampled. Chemical analyses of passive sampler extracts results showed that 15 OWCs and EDCs were detected in water from the Santa Ana River sites. Many of these compounds contributed to activity from an estrogenic in-vitro assay that showed a significant potential for impacting endocrine and reproductive systems compared to the 25 organochlorine compounds detected in aquatic biota. The site showing compounds having highest influence on sex steroid hormone activities was the point source for TTWE. Sex steroid hormone levels, secondary sex characteristics, organosomatic indices, and sperm quality parameters indicated impairment of endocrine and reproductive function of male western mosquitofish in the Santa Ana River. Exposure to EDCs and consequent impairment in mosquitofish followed the gradient of proximity to WWTP effluents, where the most significant effects were found at TTWE point source and Rialto Drain, followed by Prado Dam and Sunnyslope Creek. Each of these sites is suitable habitat for the Santa Ana sucker, especially Sunnyslope Creek and Rialto Drain where juveniles reside. Various OWCs and EDCs were detected at each Santa Ana River site, although one specific compound or group of compounds could not be singled out as a causative factor. Di (2-ethylhexyl) phthalate was strongly negatively correlated with testosterone in male mosquitofish. One group of potent environmental estrogens that likely contributed to endocrine and reproductive impairment are the natural and synthetic estrogen hormones, especially ethinyl estradiol; however, this compound was not targeted in these investigations. The multiple lines of evidence for impaired reproductive and endocrine function in western mosquitofish due to OWCs and EDCs from the Santa Ana River can be used to identify potential problems for the Santa Ana sucker inhabiting the same and nearby sites.

California

Detailed study of water quality, bottom sediment, and biota associated with irrigation drainage in the Klamath Basin, California and Oregon, 1990-92

The effect of irrigation drainage on the water quality and wildlife of the Klamath Basin in California and Oregon was evaluated during 1990-92 as part of the National Irrigation Water Quality Program of the U.S. Department of the Interior. The study focused on land serviced by the Bureau of Reclamation Klamath Project, which supplies irrigation water to agricultural land in the Klamath Basin and the Lost River Basin. The Tule Lake and Lower Klamath National Wildlife Refuges, managed by the U.S. Fish and Wildlife Service, are in the study area. These refuges provide critical resting and breeding habitat for waterfowl on the Pacific flyway and are dependent on irrigation drainwater from upstream agriculture for most of their water supply. Water-quality characteristics throughout the study area were typical of highly eutrophic systems during the summer months of 1991 and 1992. Dissolved-oxygen concentrations and pH tended to fluctuate each day in response to diurnal patterns of photosynthesis, and frequently exceeded criteria for protection of aquatic organisms. Nitrogen and phosphorus concentrations were generally at or above threshold levels characteristic of eutrophic lakes and streams. At most sites the bulk of dissolved nitrogen was organically bound. Elevated ammonia concentrations were common in the study area, especially downstream of drain inputs. High pH of water increased the toxicity of ammonia, and concentrations exceeded criteria at sites upstream and downstream of irrigated land. Concentrations of ammonia in samples from small drains on the Tule Lake refuge leaseland were higher than those measured in the larger, integrating drains at primary monitoring sites. The mean ammonia concentration in leaseland drains [1.21 milligrams per liter (mg/L)] was significantly higher than the mean concentration in canals delivering water to the leaseland fields (0.065 mg/L) and higher than concentrations reported to be lethal to Daphnia magna (median lethal concentration of 0.66 mg/L). Dissolved-oxygen concentrations also were lower, and Daphnia survivability measured during in situ bioassays was correspondingly lower in the leaseland drains than in water delivery canals. In static laboratory bioassays, water samples collected at the primary monitoring sites caused toxicity in up to 78 percent of Lemna minor tests, in up to 49 percent of Xenopus laevis tests, in 17 percent and 8 percent of Hyalella azteca and Pimephales promelas tests, respectively, and 0 percent in Daphnia magna tests. In situ exposure at the sites caused mortality in more than 83 percent of Pimephales tests and in more than 41 percent of Daphnia and Hyalella tests. Much of the observed toxicity appears to have been caused by low dissolved oxygen, high pH, and ammonia. Although water in the study area was toxic to a variety of organisms, no statistically significant differences in the degree of toxicity between sites were observed above or below irrigated agricultural land in any of the bioassays. Pesticides were frequently detected in water samples collected at the monitoring sites during the 1991 and 1992 irrigation seasons. Among the most frequently detected compounds were the herbicides simazine, metribuzin, EPTC, and metolachlor and the insecticide terbufos. All the insecticides detected were at concentrations substantially below acute toxicity values reported for aquatic organisms. The herbicide acrolein has been used extensively in the basin to manage aquatic plant growth in irrigation canals and drains. The concentration of acrolein was monitored in a canal near Tule Lake after an application in order to evaluate the potential for the pesticide to be transported to refuge waters. Although acrolein concentrations were toxic to fish in the channels adjacent to Tule Lake, very little of the canal water entered the refuge during the monitoring period. Organochlorine pesticide concentrations in 25 surficial sediment samples collected in 1990 were below baseline levels commonly found in soils and sediment. Seventeen sediment samples were analyzed for chlorophenoxy acid herbicides and two samples were analyzed for organophosphorus and carbamate insecticides in 1992. No pesticides were detected in any of these samples. Residues of the trace elements selenium, mercury, and arsenic in algae, invertebrates, fish, and avian eggs revealed no bioaccumulation problems. Concentrations of organochlorine compounds, especially of p,p' DDE, were associated with a mean 11-percent eggshell thinning in white-faced ibis. However, ibis populations appear to be increasing, and some eggs of ibis were relatively low in DDE concentration. DDE concentrations in eggs of western grebes were not as high as in the eggs of ibis. Concentrations and types of organochlorine compounds detected in grebe and ibis eggs were highly variable, indicating that the birds were exposed to these compounds outside the basin. Fish and invertebrates inhabiting drainwater were representative of pollution-tolerant species assemblages. The aquatic communities retained little of their historic ecological structure. Extensive hydrologic modifications and hypereutrophic conditions in Klamath Basin waterways have degraded the quality of aquatic habitat and altered aquatic communities.

California, Oregon

Evaluation of alternative groundwater-management strategies for the Bureau of Reclamation Klamath Project, Oregon and California

The water resources of the upper Klamath Basin, in southern Oregon and northern California, are managed to achieve various complex and interconnected purposes. Since 2001, irrigators in the Bureau of Reclamation Klamath Irrigation Project (Project) have been required to limit surface-water diversions to protect habitat for endangered freshwater and anadromous fishes. The reductions in irrigation diversions have led to an increased demand for groundwater by Project irrigators, particularly in drought years. The potential effects of sustained pumping on groundwater and surface-water resources have caused concern among Federal and state agencies, Indian tribes, wildlife groups, and groundwater users. To aid in the development of a viable groundwater-management strategy for the Project, the U.S. Geological Survey, in collaboration with the Klamath Water and Power Agency and the Oregon Water Resources Department, developed a groundwater-management model that links groundwater simulation with techniques of constrained optimization. The overall goal of the groundwater-management model is to determine the patterns of groundwater pumping that, to the extent possible, meet the supplemental groundwater demands of the Project. To ensure that groundwater development does not adversely affect groundwater and surface-water resources, the groundwater-management model includes constraints to (1) limit the effects of groundwater withdrawal on groundwater discharge to streams and lakes that support critical habitat for fish listed under the Endangered Species Act, (2) ensure that drawdowns do not exceed limits allowed by Oregon water law, and (3) ensure that groundwater withdrawal does not adversely affect agricultural drain flows that supply a substantial portion of water for irrigators and wildlife refuges in downslope areas of the Project. Groundwater-management alternatives were tested and designed within the framework of the Klamath Basin Restoration Agreement (currently [2013] awaiting authorizing Federal legislation), which would establish a permanent limit on the amount of surface water that can be diverted annually to the Project. Groundwater-management scenarios were evaluated for the period 1970•2004; supplemental groundwater demand by the Project was estimated as the part of irrigation demand that would not have been satisfied by the surface-water diversion allowed under the Klamath Basin Restoration Agreement. Over the 35-year management period, 22 years have supplemental groundwater demand, which ranges from a few thousand acre-feet (acre-ft) to about 100,000 acre-ft in the driest years. The results of the groundwater-management model indicate that supplemental groundwater pumping by the Project can be managed to avoid adverse effects to groundwater discharge that supports critical aquatic habitat. The existing configuration of wells in the Project would be able to meet groundwater-pumping goals in 14 of the 22 years with supplemental groundwater demand; however, substantial irrigation shortages can be expected during drought periods when the demand for supplemental groundwater is highest. The maximum irrigation-season withdrawal calculated by the groundwater-management model is about 60,000 acre-ft, the average withdrawal in drought years is about 54,000 acre-ft, and the amount of unmet groundwater demand reaches a maximum of about 45,000 acre-ft. A comparison of optimized groundwater withdrawals by geographic region shows that the highest annual withdrawals are associated with wells in the Tule Lake and Klamath Valley regions of the Project. The patterns of groundwater withdrawal also show that a substantial amount of the available pumping capacity is unused due to the restrictions imposed by drawdown constraints. Subsequent model applications were used to evaluate the sensitivity of optimization results to various factors. A sensitivity analysis quantified the changes in optimized groundwater withdrawals that result from changes in drawdown-constraint limits. The analysis showed the potential for substantial increases in withdrawals of groundwater with less restrictive drawdown limits at drawdown-control sites in the California part of the model. Systematic variation of the drains-constraint limit yielded a trade-off curve between optimized groundwater withdrawals and the allowable reduction in groundwater discharge to the Project drain system. Additional model applications were used to assess the value of increasing the pumping capacity of the network of wells serving the Project, and the relation between reduced off-Project groundwater pumping and increased pumping by Project irrigators.

California;Oregon

Movements of radio-marked California Ridgway's rails during monitoring surveys: Implications for population monitoring

The California Ridgway's rail Rallus obsoletus obsoletus (hereafter California rail) is a secretive marsh bird endemic to tidal marshes in the San Francisco Bay (hereafter bay) of California. The California rail has undergone significant range contraction and population declines due to a variety of factors, including predation and the degradation and loss of habitat. Call-count surveys, which include call playbacks, based on the standardized North American marsh bird monitoring protocol have been conducted throughout the bay since 2005 to monitor population size and distribution of the California rail. However, call-count surveys are difficult to evaluate for efficacy or accuracy. To measure the accuracy of call-count surveys and investigate whether radio-marked California rails moved in response to call-count surveys, we compared locations of radio-marked California rails collected at frequent intervals (15 min) to California rail detections recorded during call-count surveys conducted over the same time periods. Overall, 60% of radio-marked California rails within 200 m of observers were not detected during call-count surveys. Movements of radio-marked California rails showed no directional bias ( P = 0.92) irrespective of whether or not playbacks of five marsh bird species (including the California rail) were broadcast from listening stations. Our findings suggest that playbacks of rail vocalizations do not consistently influence California rail movements during surveys. However, call-count surveys may underestimate California rail presence; therefore, caution should be used when relating raw numbers of call-count detections to population abundance.

Journal of Fish and Wildlife Management

Reconnaissance investigation of water quality, bottom sediment, and biota associated with irrigation drainage in the lower-Colorado River valley, Arizona, California, and Nevada, 1986-87

The Lower Colorado River Valley Irrigation Drainage Project area included the Colorado River and its environs from Davis Dam to just above Imperial Dam. Water, bottom sediment, and biota were sampled at selected locations within the study area and analyzed for selected inorganic and synthetic organic constituents that are likely to be present at toxic concentrations. With the exceptions of selenium and DDE, this study found sampling locations to be relatively free of large concentrations of toxic constituents that could be a threat to humans, fish, and wildlife. Selenium was the only inorganic constituent to exceed any existing standard, criterion, or guideline for protection of fish and wildlife resources. Concentrations of DDE in double-crested cormorants, however, exceeded the criterion of 1.0 microgram per gram established by the National Academy of Sciences and the National Academy of Engineering for DDT and its metabolites for protection of wildlife. Dissolved-selenium concentrations in water from the lower Colorado River appear to be derived from sources above Davis Dam. At this time, therefore , agricultural practices in the lower Colorado River valley do not appear to exacerbate selenium concentrations. This fact, however, does not mean that the aquatic organisms and their predators are not in jeopardy. Continued selenium loading to the lower Colorado environment could severely affect important components of the ecosystem. (Author 's abstract)

Arizona, California, Nevada

A genetic assessment of the recovery units for the mojave population of the desert tortoise, Gopherus agassizii

In the 1994 Recovery Plan for the Mojave population of the desert tortoise, Gopherus agassizii, the US Fish and Wildlife Service established 6 recovery units by using the best available data on habitat use, behavior, morphology, and genetics. To further assess the validity of the recovery units, we analyzed genetic data by using mitochondrial deoxyribonucleic acid (mtDNA) sequences and nuclear DNA microsatellites. In total, 125 desert tortoises were sampled for mtDNA and 628 for microsatellites from 31 study sites, representing all recovery units and desert regions throughout the Mojave Desert in California and Utah, and the Colorado Desert of California. The mtDNA revealed a great divergence between the Mojave populations west of the Colorado River and those occurring east of the river in the Sonoran Desert of Arizona. Some divergence also occurred between northern and southern populations within the Mojave population. The microsatellites indicated a low frequency of private alleles and a significant correlation between genetic and geographic distance among 31 sample sites, which was consistent with an isolation-by-distance population structure. Regional genetic differentiation was complementary to the recovery units in the Recovery Plan. Most allelic frequencies in the recovery units differed. An assignment test correctly placed most individuals to their recovery unit of origin. Of the 6 recovery units, the Northeastern and the Upper Virgin River units showed the greatest differentiation; these units may have been relatively more isolated than other areas and should be managed accordingly. The Western Mojave Recovery Unit, by using the new genetic data, was redefined along regional boundaries into the Western Mojave, Central Mojave, and Southern Mojave recovery units. Large-scale translocations of tortoises and habitat disturbance throughout the 20th century may have contributed to the observed patterns of regional similarity. ?? 2007 Chelonian Research Foundation.

California

Effects of groundwater pumping on agricultural drains in the Tule Lake subbasin, Oregon and California

Since 2001, irrigators in the upper Klamath Basin have increasingly turned to groundwater to compensate for reductions in surface-water allocation caused by shifts from irrigation use to instream flows for Endangered Species Act listed fishes. The largest increase in groundwater pumping has been in and around the Bureau of Reclamation&rsquo;s Klamath Irrigation Project, which includes the Tule Lake subbasin in the southern part of the upper Klamath Basin. Agricultural drains on the Klamath Project are an important source of water for downstream irrigators and for the Tule Lake and Lower Klamath Lake National Wildlife Refuges. U.S. Geological Survey regional groundwater-flow model simulations and records of irrigation-return flow pumped from the Tule Lake subbasin into the adjacent Lower Klamath Lake subbasin have indicated that water-level declines from pumping may be causing decreased flow of shallow groundwater to agricultural drains. To better define the effect of increased pumping on drain flow and on the water balance of the groundwater system, the annual water volume pumped from drains in three subareas of the Tule Lake subbasin was estimated and a fine-grid, local groundwater model of the Tule Lake subbasin was constructed. Results of the agricultural-drain flow analysis indicate that groundwater discharge to drains has decreased such that flows in 2012 were approximately 32,400 acre-ft less than the 1997&ndash;2000 average flow. This decrease was concentrated in the northern and southeastern parts of the subbasin, which corresponds with the areas of greatest groundwater pumping. Model simulation results of the Tule Lake subbasin groundwater model indicate that increased supplemental pumping is the dominant stress to the groundwater system in the subbasin. Simulated supplemental pumping and decreased recharge from irrigation between 2000 and 2010 totaled 323,573 acre-ft, 234,800 acre-ft (73 percent) of which was from supplemental pumping. The response of the groundwater system to this change in stress included about 180,500 acre-ft (56 percent) of decreased groundwater discharge to drains and a 126,000 acre-ft (39 percent) reduction in aquifer storage. The remaining 5 percent came from reduced groundwater flow to other model boundaries, including the Lost River, the Tule Lake sumps, and interbasin flow.

California, Oregon

Western state instream flow programs: a comparative assessment

During their early history, Western States water rights laws were primarily means for facilitating and regulating water diversions for offstream, consumptive use. More recently, a countervailing concern for instream values such as fish and wildlife habitat, recreation, aesthetic values, and water quality has emerged in the legislative and administrative handling of water rights. As of 1988, the Western United States show a variety of approaches to balancing instream and diversion water rights, from zero control through administrative actions to legislatively established rights for guaranteed instream flows. The nine Western States that have adopted statutory instream flow protection programs include Alaska, Colorado, Hawaii, Idaho, Montana, Oregon, Utah, Washington, and Wyoming. Arizona, California, and Nevada have relied, to date, on administrative and judicial decisions, while New Mexico has established no mechanism for protecting instream water uses. In the States with statutory protection, instream water uses are granted the same legal status as any other water uses under the prior appropriation doctrine. The success of instream flow protection has been remarkable, given the controversial nature of the issue, with nearly 2,000 stream reaches protected.

Report

Biological and societal dimensions of lead poisoning in birds in the USA

The ingestion of spent lead shot was known to cause mortality in wild waterfowl in the US a century before the implementation of nontoxic shot regulations began in 1972. The biological foundation for this transition was strongly supported by both field observations and structured scientific investigations. Despite the overwhelming evidence, various societal factors forestalled the full transition to nontoxic shot for waterfowl hunting until 1991. Now, nearly 20 years later, these same factors weigh heavily in current debates about nontoxic shot requirements for hunting other game birds, requiring nontoxic bullets for big game hunting in California Condor range and for restricting the use of small lead sinkers and jig heads for sport-fishing. As with waterfowl, a strong science-based foundation is requisite for further transitions to nontoxic ammunition and fishing weights. Our experiences have taught us that the societal aspects of this transition are as important as the biological components and must be adequately addressed before alternatives to toxic lead ammunition, fishing weights, and other materials will be accepted as an investment in wildlife conservation.

Book chapter

Conserving the Greater Sage-grouse: A social-ecological systems case study from the California-Nevada region

The Endangered Species Act (ESA) continues to serve as one of the most powerful and contested federal legislative mandates for conservation. In the midst of heated debates, researchers, policy makers, and conservation practitioners champion the importance of cooperative conservation and social-ecological systems approaches, which forge partnerships at multiple levels and scales to address complex ecosystem challenges. However, few real-world examples exist to demonstrate how multifaceted collaborations among stakeholders who share a common goal of conserving at-risk species may be nested within a systems framework to achieve social and ecological goals. Here, we present a case study of Greater Sage-grouse (Centrocercus urophasianus) conservation efforts in the “Bi-State” region of California and Nevada, United States. Using key-informant interviews, we explored dimensions and drivers of this landscape-scale conservation effort. Three themes emerged from the interviews, including 1) ESA action was transformed into opportunity for system-wide conservation; 2) a diverse, locally based partnership anchored collaboration and engagement across multiple levels and scales; and 3) best-available science combined with local knowledge led to “certainty of effectiveness and implementation”—the criteria used by the US Fish and Wildlife Service to evaluate conservation efforts when making listing decisions. Ultimately, collaborative conservation through multistakeholder engagement at various levels and scales led to proactive planning and implementation of conservation measures and precluded the need for an ESA listing of the Bi-State population of Greater Sage-grouse. This article presents a potent example of how a systems approach integrating policy, management, and learning can be used to successfully overcome the conflict-laden and “wicked” challenges that surround at-risk species conservation.

California, Nevada