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Hydrogeologic framework and groundwater/surface-water interactions of the Chehalis River basin, Washington

The Chehalis River has the largest drainage basin of any river entirely contained within the State of Washington with a watershed of approximately 2,700 mi 2 and has correspondingly diverse geology and land use. Demands for water resources have prompted the local citizens and governments of the Chehalis River basin to coordinate with Federal, State and Tribal agencies through the Chehalis Basin Partnership to develop a long-term watershed management plan. The recognition of the interdependence of groundwater and surface-water resources of the Chehalis River basin became the impetus for this study, the purpose of which is to describe the hydrogeologic framework and groundwater/surface-water interactions of the Chehalis River basin. Surficial geologic maps and 372 drillers' lithostratigraphic logs were used to generalize the basin-wide hydrogeologic framework. Five hydrogeologic units that include aquifers within unconsolidated glacial and alluvial sediments separated by discontinuous confining units were identified. These five units are bounded by a low permeability unit comprised of Tertiary bedrock. A water table map, and generalized groundwater-flow directions in the surficial aquifers, were delineated from water levels measured in wells between July and September 2009. Groundwater generally follows landsurface-topography from the uplands to the alluvial valley of the Chehalis River. Groundwater gradients are highest in tributary valleys such as the Newaukum River valley (approximately 23 cubic feet per mile), relatively flat in the central Chehalis River valley (approximately 6 cubic feet per mile), and become tidally influenced near the outlet of the Chehalis River to Grays Harbor. The dynamic interaction between groundwater and surface-water was observed through the synoptic streamflow measurements, termed a seepage run, made during August 2010, and monitoring of water levels in wells during the 2010 Water Year. The seepage run revealed an overall gain of 56.8 ± 23.7 cubic feet per second over 32.8 river miles (1.7 cubic feet per second per mile), and alternating gains and losses of streamflow ranging from -48.3 to 30.9 cubic feet per second per mile, which became more pronounced on the Chehalis River downstream of Grand Mound. However, most gains and losses were within measurement error. Groundwater levels measured in wells in unconsolidated sediments fluctuated with changes in stream stage, often within several hours. These fluctuations were set by precipitation events in the upper Chehalis River basin and tides of the Pacific Ocean in the lower Chehalis River basin.±

Scientific Investigations Report↗

Trends in suspended-sediment loads and concentrations in the Mississippi River Basin, 1950–2009

Trends in loads and concentrations of suspended sediment and suspended sand generally were downward for stations within the Mississippi River Basin during the 60-, 34-, and 12-year periods analyzed. Sediment transport in the lower Mississippi River has historically been, and continues to be, most closely correlative to sediment contributions from the Missouri River, which generally carried the largest annual suspended-sediment load of the major Mississippi River subbasins. The closure of Fort Randall Dam in the upper Missouri River in 1952 was the single largest event in the recorded historical decline of suspended-sediment loads in the Mississippi River Basin. Impoundments on tributaries and sediment reductions as a result of implementation of agricultural conservation practices throughout the basin likely account for much of the remaining Mississippi River sediment transport decline. Scour of the main-stem channel downstream from the upper Missouri River impoundments is likely the largest source of suspended sand in the lower Missouri River. The Ohio River was second to the Missouri River in terms of sediment contributions, followed by the upper Mississippi and Arkansas Rivers. Declines in sediment loads and concentrations continued through the most recent analysis period (1998–2009) at available Mississippi River Basin stations. Analyses of flow-adjusted concentrations of suspended sediment indicate the recent downward temporal changes generally can be explained by corresponding decreases in streamflows.

Mississippi River Basin↗

Quality of water in the White River and Lake Tapps, Pierce County, Washington, May-December 2010

The White River and Lake Tapps are part of a hydropower system completed in 1911–12. The system begins with a diversion dam on the White River that routes a portion of White River water into the southeastern end of Lake Tapps, which functioned as a storage reservoir for power generation. The stored water passed through the hydroelectric facilities at the northwestern end of the lake and returned to the White River through the powerhouse tailrace. Power generation ceased in January 2004, which altered the hydrology of the system by reducing volumes of water diverted out of the river, stored, and released through the powerhouse. This study conducted from May to December 2010 created a set of baseline data collected under a new flow regime for selected reaches of the White River, the White River Canal (Inflow), Lake Tapps Diversion (Tailrace) at the powerhouse, and Lake Tapps. Three sites, one on the White River at Headworks, one on the White River at R Street, and one on the Tailrace, were equipped for continuous recording of water-quality data, and three sites (Headworks, White River Canal Inflow, and Tailrace) were sampled for discrete water-quality data. Nine lake sites were measured for physical and water-quality properties and samples were collected for analyses of nutrients, suspended solids, and fecal-coliform bacteria concentrations. Samples from the lake also were analyzed for concentrations of chlorophyll a and organic chemicals. Discrete samples indicated that water from the White River, White River Canal Inflow, and Tailrace sites generally was turbid, warm, chemically dilute, and well-oxygenated. Exceptions occurred at the sites when flow to the White River Canal was suspended or when little or no flow was released from the lake into the Tailrace. The quality of physical properties and concentrations in water measured continuously at the three sites generally was good and met the freshwater criteria designated by Washington State Department of Ecology for recreational and aquatic-life uses, with several exceptions. The 7-day average of daily maximum temperatures (7–DADMax) was greater than the freshwater aquatic life criterion of 16 degrees Celsius (°C) for core summer salmonid habitat on 6 days at the Headworks site and 37 days at the R-Street site during the study. The 7-DADMax temperatures were greater than the 13°C criterion for spawning, rearing, and incubation on 6 days at the Headworks site and 20 days at the R-Street site. The freshwater aquatic life criterion for dissolved oxygen of 9.5 milligrams per liter (mg/L) for core summer salmonid habitat was not met at the Headworks and R-Street sites for periods during July and August 2010. Exceptions also occurred at the Headworks site for measurements of pH, which were greater than the aquatic life upper limit of 8.5 pH units during July 2010. Aquatic life pH criteria were not met at the Tailrace site during June, July, and August 2010, when pH was greater than 8.5 pH units, and during August 2010 when pH decreased to less than 6.5 pH units. Lake Tapps water near the surface was relatively clear, warm, and well oxygenated. The clearest water of the nine lake sites was at the Deep site with a median Secchi disk transparency measurement of 6.05 m (meters), which represents a two- to six-fold increase over historical measurements of transparency at this location. Median water temperatures were 18.2–18.9°C and maximums were from 22.9–25.0°C. Median dissolved oxygen concentrations were greater than 8.42 mg/L and minimums generally were not lower than 7.4 mg/L. By early July 2010, weak thermal stratification developed at most lake sites into at least a warm surface layer overlying a small thermocline. A well-defined hypolimnion developed below the thermocline only at the Deep site. With the development of thermal stratification, hypolimnion water became anoxic at several sites (Deep, Tapps Island, Snag Island, and Lake Outlet). By late September 2010, an anoxic layer about 15 m thick had formed in the hypolimnion of the Deep site. Mixing during autumn overturn in late November re-oxygenated the water column of all the sites with about 10–12 mg/L of dissolved oxygen. On the basis of pH and specific conductance measurements, Lake Tapps water is pH neutral and chemically dilute. Median pH values for water in the epilimnion and the hypolimnion ranged from 6.84 to 7.64 pH units and maximums did not exceed 7.8 pH units at any site. Median specific conductance was typically less than 70 microsiemens per centimeter at 25°C for the epilimnion and the hypolimnion. Concentrations of nutrients and chlorophyll a in Lake Tapps were low. At most of the sites and in most of the samples from the epilimnion, total phosphorus concentrations were less than the Washington State Department of Ecology phosphorus criterion of 0.01 mg/L for maintaining oligotrophic conditions. Median concentrations of total nitrogen (unfiltered water) ranged from about 0.14 mg/L (Deep, Tapps Island, and Dike 2B sites) to about 0.18 mg/L (Allan Yorke and Lake Inlet sites). Chlorophyll a concentrations were low with median concentrations of 2.16 micrograms per liter (mg/L) or less. The majority of chlorophyll a concentrations were well below the Oregon Department of Environmental Quality action level of 10 mg/L. Using the Carlson Trophic-Status Index and average measures of transparency, chlorophyll a , and total phosphorus data from this study, Lake Tapps generally fits within the oligotrophic classification, but with a few exceptions. At Allan Yorke, Lake Inlet, and Southeast Arm sites, the chlorophyll a and total phosphorus indexes of nearly 40 approach the upper limit of oligotrophic conditions. In addition, average concentrations of total phosphorus at Lake Inlet and Southeast Arm are at Nürnberg's (1996) threshold concentration of 0.01 mg/L, which suggests a slight tendency towards mesotrophic conditions at these two sites during summer July–September. On the basis of epilimnetic nitrogen to phosphorus concentration ratios of greater than 17, Lake Tapps primary production is phosphorus limited at all but two study sites. At the Lake Inlet and Southeast Arm sites, ratios of 15 and 16, respectively, for the summer period suggest either nitrogen or phosphorus (or both) may limit algal growth. Water samples collected at the Allan Yorke, Snag Island, and Lake Outlet study sites were screened for the presence of more than 250 organic chemicals. A total of 14 compounds were detected in trace amounts (or determined to be present) at one or more of the 3 sites. The Allan Yorke site had 9 detections, the Snag Island site had 10 detections, and the Lake Outlet site had 5 detections of compounds mostly belonging to the group of wastewater indicator chemicals. Compounds detected (or with verified presence) at all three sites included the herbicide 2,4-D, the insecticide and mosquito repellant DEET, the herbicide fluridone used for Eurasian watermilfoil eradication, and the herbicide prometon. The largest concentrations of these compounds were in samples from the Allan Yorke site; the lowest concentrations were from the Lake Outlet site.

Washington↗

Hydrogeologic framework of the Wood River Valley aquifer system, south-central Idaho

The Wood River Valley contains most of the population of Blaine County and the cities of Sun Valley, Ketchum, Hailey, and Bellevue. This mountain valley is underlain by the alluvial Wood River Valley aquifer system, which consists primarily of a single unconfined aquifer that underlies the entire valley, an underlying confined aquifer that is present only in the southernmost valley, and the confining unit that separates them. The entire population of the area depends on groundwater for domestic supply, either from domestic or municipal-supply wells, and rapid population growth since the 1970s has caused concern about the long-term sustainability of the groundwater resource. As part of an ongoing U.S. Geological Survey effort to characterize the groundwater resources of the Wood River Valley, this report describes the hydrogeologic framework of the Wood River Valley aquifer system. Although most of the Wood River Valley aquifer system is composed of Quaternary-age sediments and basalts of the Wood River Valley and its tributaries, older igneous, sedimentary, or metamorphic rocks that underlie these Quaternary deposits also are used for water supply. It is unclear to what extent these rocks are hydraulically connected to the main part of Wood River Valley aquifer system and thus whether they constitute separate aquifers. Paleozoic sedimentary rocks in and near the study area that produce water to wells and springs are the Phi Kappa and Trail Creek Formations (Ordovician and Silurian), the Milligen Formation (Devonian), and the Sun Valley Group including the Wood River Formation (Pennsylvanian-Permian) and the Dollarhide Formation (Permian). These sedimentary rocks are intruded by granitic rocks of the Late Cretaceous Idaho batholith. Eocene Challis Volcanic Group rocks overlie all of the older rocks (except where removed by erosion). Miocene Idavada Volcanics are found in the southern part of the study area. Most of these rocks have been folded, faulted, and metamorphosed to some degree, thus rock types and their relationships vary over distance. Quaternary-age sediment and basalt compose the primary source of groundwater in the Wood River Valley aquifer system. These Quaternary deposits can be divided into three units: a coarse-grained sand and gravel unit, a fine-grained silt and clay unit, and a single basalt unit. The fine- and coarse-grained units were primarily deposited as alluvium derived from glaciation in the surrounding mountains and upper reaches of tributary canyons. The basalt unit is found in the southeastern Bellevue fan area and is composed of two flows of different ages. Most of the groundwater produced from the Wood River Valley aquifer system is from the coarse-grained deposits. The altitude of the pre-Quaternary bedrock surface in the Wood River Valley was compiled from about 1,000 well-driller reports for boreholes drilled to bedrock and about 70 Horizontal-to-Vertical Spectral Ratio (HVSR) ambient-noise measurements. The bedrock surface generally mimics the land surface by decreasing down tributary canyons and the main valley from north to south; it ranges from more than 6,700 feet in Baker Creek to less than 4,600 feet in the central Bellevue fan. Most of the south-central portion of the Bellevue fan is underlain by an apparent topographically closed area on the bedrock surface that appears to drain to the southwest towards Stanton Crossing. Quaternary sediment thickness ranges from less than a foot on main and tributary valley margins to about 350 feet in the central Bellevue fan. Hydraulic conductivity for 81 wells in the study area was estimated from well-performance tests reported on well-driller reports. Estimated hydraulic conductivity for 79 wells completed in alluvium ranges from 1,900 feet per day (ft/d) along Warm Springs Creek to less than 1 ft/d in upper Croy Canyon. A well completed in bedrock had an estimated hydraulic conductivity value of 10 ft/d, one well completed in basalt had a value of 50 ft/d, and three wells completed in the confined system had values ranging from 32 to 52 ft/d. Subsurface outflow of groundwater from the Wood River Valley aquifer system into the eastern Snake River Plain aquifer was estimated to be 4,000 acre-feet per year. Groundwater outflow beneath Stanton Crossing to the Camas Prairie was estimated to be 300 acre-feet per year.

Idaho↗

Flow-adjusted trends in dissolved selenium load and concentration in the Gunnison and Colorado Rivers near Grand Junction, Colorado, water years 1986--2008

As a result of elevated selenium concentrations, many western Colorado rivers and streams are on the U.S. Environmental Protection Agency 2010 Colorado 303(d) list, including the main stem of the Colorado River from the Gunnison River confluence to the Utah border. Selenium is a trace metal that bioaccumulates in aquatic food chains and can cause reproductive failure, deformities, and other adverse impacts in birds and fish, including several threatened and endangered fish species. Salinity in the upper Colorado River has been the focus of source-control efforts for many years. Although salinity loads and concentrations have been previously characterized at the U.S. Geological Survey (USGS) streamflow-gaging stations at the Gunnison River near Grand Junction, Colo., and at the Colorado River near the Colorado-Utah State line, trends in selenium load and concentration at these two stations have not been studied. The USGS, in cooperation with the Bureau of Reclamation and the Colorado River Water Conservation District, evaluated dissolved selenium (herein referred to as "selenium") load and concentration trends at these two sites to inform decision makers on the status and trends of selenium. This report presents results of the evaluation of trends in selenium load and concentration for two USGS streamflow-gaging stations: the Gunnison River near Grand Junction, Colo. ("Gunnison River site"), USGS site 09152500, and the Colorado River near Colorado-Utah State line ("Colorado River site"), USGS site 09163500. Flow-adjusted selenium loads were estimated for the beginning water year (WY) of the study, 1986, and the ending WY of the study, 2008. The difference between flow-adjusted selenium loads for WY 1986 and WY 2008 was selected as the method of analysis because flow adjustment removes the natural variations in load caused by changes in mean-daily streamflow, emphasizing human-caused changes in selenium load and concentration. Overall changes in human-caused effects in selenium loads and concentrations during the period of study are of primary interest to the cooperators. Selenium loads for each of the 2 water years were calculated by using normalized mean-daily streamflow, measured selenium concentration, standard linear regression techniques, and data previously collected at the two study sites. Mean-daily streamflow was normalized for each site by averaging the daily streamflow for each day of the year over the 23-year period of record. Thus, for the beginning and ending water years, estimations could be made of loads that would have occurred without the effect of year-to-year streamflow variation. The loads thus calculated are illustrative of the change in loads between water years 1986 and 2008, and are not the actual loads that occurred in those 2 water years. The estimated 50th and 85th percentile selenium concentrations associated with the selenium loads were also calculated for WY 1986 and WY 2008 at each site. Time-trends in selenium concentration at the two sites were charted by using regression techniques for partial residuals for the entire study period (WY 1986 through WY 2008). Annual selenium load for the Gunnison River site was estimated to be 23,196 pounds for WY 1986 and 16,560 pounds for WY 2008, a 28.6 percent decrease. Lower and upper 95-percent confidence levels for WY 1986 annual load were 22,360 and 24,032 pounds. Lower and upper 95-percent confidence levels for WY 2008 annual load were 15,724 and 17,396 pounds. Estimated 50th percentile daily selenium concentrations decreased from 6.41 to 4.57 micrograms/liter from WY 1986 to WY 2008, whereas estimated 85th percentile daily selenium concentrations decreased from 7.21 to 5.13 micrograms/liter from WY 1986 to WY 2008. Annual selenium load for the Colorado River site was estimated to be 56,587 pounds for WY 1986 and 34,344 pounds for WY 2008, a 39.3 percent decrease. Lower and upper 95-percent confidence levels for WY 1986 annual load were 53,785 and 59,390 pounds. Lower and upper 95-percent confidence levels for WY 2008 annual load were 31,542 and 37,147 pounds. Estimated 50th percentile daily selenium concentrations decreased from 6.44 to 3.86 micrograms/liter from WY 1986 to WY 2008, whereas estimated 85th percentile daily selenium concentrations decreased from 7.94 to 4.72 micrograms/liter from WY 1986 to WY 2008.

Colorado↗

Grain-size distribution and selected major and trace element concentrations in bed-sediment cores from the Lower Granite Reservoir and Snake and Clearwater Rivers, eastern Washington and northern Idaho, 2010

Lower Granite Dam impounds the Snake and Clearwater Rivers in eastern Washington and northern Idaho, forming Lower Granite Reservoir. Since 1975, the U.S. Army Corps of Engineers has dredged sediment from the Lower Granite Reservoir and the Snake and Clearwater Rivers in eastern Washington and northern Idaho to keep navigation channels clear and to maintain the flow capacity. In recent years, other Federal agencies, Native American governments, and special interest groups have questioned the negative effects that dredging might have on threatened or endangered species. To help address these concerns, the U.S. Geological Survey, in cooperation with the U.S. Army Corps of Engineers, collected and analyzed bed-sediment core samples (hereinafter cores) in Lower Granite Reservoir and impounded or backwater affected parts of the Snake and Clearwater Rivers. Cores were collected during the spring and fall of 2010 from submerged sampling locations in the Lower Granite Reservoir, and Snake and Clearwater Rivers. A total of 69 cores were collected by using one or more of the following corers: piston, gravity, vibrating, or box. From these 69 cores, 185 subsamples were removed and submitted for grain size analyses, 50 of which were surficial-sediment subsamples. Fifty subsamples were also submitted for major and trace elemental analyses. Surficial-sediment subsamples from cores collected from sites at the lower end of the reservoir near the dam, where stream velocities are lower, generally had the largest percentages of silt and clay (more than 80 percent). Conversely, all of the surficial-sediment subsamples collected from sites in the Snake River had less than 20 percent silt and clay. Most of the surficial-sediment subsamples collected from sites in the Clearwater River contained less than 40 percent silt and clay. Surficial-sediment subsamples collected near midchannel at the confluence generally had more silt and clay than most surficial-sediment subsamples collected from sites on the Snake and Clearwater Rivers or even sites further downstream in Lower Granite Reservoir. Two cores collected at the confluence and all three cores collected on the Clearwater River immediately upstream from the confluence were extracted from a thick sediment deposit as shown by the cross section generated from the bathymetric surveys. The thick sediment deposits at the confluence and on the Clearwater River may be associated with floods in 1996 and 1997 on the Clearwater River. Fifty subsamples from 15 cores were analyzed for major and trace elements. Concentrations of trace elements were low, with respect to sediment quality guidelines, in most cores. Typically, major and trace element concentrations were lower in the subsamples collected from the Snake River compared to those collected from the Clearwater River, the confluence of the Snake and Clearwater Rivers, and Lower Granite Reservoir. Generally, lower concentrations of major and trace elements were associated with coarser sediments (larger than 0.0625 millimeter) and higher concentrations of major and trace elements were associated with finer sediments (smaller than 0.0625 millimeter).

Idaho, Washington↗

Calibration of a two-dimensional hydrodynamic model for parts of the Allegheny, Monongahela, and Ohio Rivers, Allegheny County, Pennsylvania

The U.S. Geological Survey (USGS), in cooperation with the Allegheny County Sanitary Authority, developed a validated two-dimensional Resource Management Associates2 (RMA2) hydrodynamic model of parts of the Allegheny, Monongahela, and Ohio Rivers (Three Rivers) to help assess the effects of combined sewer overflows (CSOs) and sanitary sewer overflows (SSOs) on the rivers. The hydrodynamic model was used to drive a water-quality model of the study area that was capable of simulating the transport and fate of fecal-indicator bacteria and chemical constituents under open-water conditions. The study area includes 14 tributary streams and parts of the Three Rivers where they enter and exit Allegheny County, an area of approximately 730 square miles (mi 2 ). The city of Pittsburgh is near the center of the county, where the Allegheny and Monongahela Rivers join to form the headwaters of the Ohio River. The Three Rivers are regulated by a series of fixed-crest dams, gated dams, and radial (tainter) gates and serve as the receiving waters for tributary streams, CSOs, and SSOs. The RMA2 model was separated into four individual segments on the basis of the U.S. Army Corps of Engineers navigational pools in the study area (Dashields; Emsworth; Allegheny River, Pool 2; and Braddock), which were calibrated individually using measured water-surface slope, velocity, and discharge during high- and low-flow conditions. The model calibration process included the comparison of water-surface elevations at five locations and velocity profiles at more than 80 cross sections in the study area. On the basis of the calibration and validation results that included water-surface elevations and velocities, the model is a representative simulation of the Three Rivers flow patterns for discharges ranging from 4,050 to 47,400 cubic feet per second (ft 3 /s) on the Allegheny River, 2,550 to 40,000 ft 3 /s on the Monongahela River, and 10,900 to 99,000 ft 3 /s on the Ohio River. The Monongahela River was characterized by unsteady conditions during low and high flows, which affected the calibration range. The simulated low-flow water-surface elevations typically were within 0.2 feet (ft) of measured values, whereas the simulated high-flow water-surface elevations were typically within 0.3 ft of the measured values. The mean error between simulated and measured velocities was less than 0.07 ft/s for low-flow conditions and less than 0.17 ft/s for high-flow conditions.

Pennsylvania↗

Nitrate in the Mississippi River and its tributaries, 1980-2010: an update

Nitrate concentration and flux were estimated from 1980 through 2010 at eight sites in the Mississippi River Basin as part of the National Water-Quality Assessment (NAWQA) Program of the U.S. Geological Survey (USGS). These estimates extend the results from a previous investigation that provided nitrate estimates from 1980 through 2008 at the same sites. From 1980 through 2010, annual flow-normalized (FN) nitrate concentration and flux in the Iowa and Illinois Rivers decreased by 11 to 15 percent. These two rivers had the highest FN nitrate concentration in 1980 (5.3 milligrams per liter [mg/L] and 3.9 mg/L, respectively) of any of the study sites. Nitrate increased in the Missouri River (79 and 45 percent increase in FN concentration and flux, respectively), and at the four sites on the Mississippi River (17 to 70 percent increase in FN concentration and 8 to 55 percent increase in FN flux) from 1980 through 2010. Nitrate in the Ohio River was generally stable during this time. Historically, nitrate was high and changed little in the Iowa and Illinois Rivers; however, nitrate concentrations began to decrease around 2000, and this decrease continued through 2010. Also during this time, near-flat nitrate trends in lower sections of the Mississippi River began increasing, likely reflecting the acceleration of already increasing nitrate trends in the upper Mississippi and Missouri Rivers, in addition to increases in inputs from other tributaries in the lower part of the Mississippi River Basin. Spring trends (April through June) generally parallel annual trends at all sites from 1980 through 2010, except in the Iowa River where decreasing nitrate during the spring was not observed. In general, most sites had increases in nitrate concentration at low streamflows, which suggests increases in legacy nitrate from groundwater or point source contributions. In aggregate, the decreases in nitrate concentrations from the Iowa and Illinois Rivers, which largely occurred during high flows, appear to be overshadowed by increasing nitrate concentrations across much of the Mississippi River Basin.

Gulf Of Mexico;Illinois River;Iowa River;Mississip↗

Upstream factors affecting Tualatin River algae—Tracking the 2008 Anabaena algae bloom to Wapato Lake, Oregon

Significant Findings A large bloom that included floating mats of the blue-green algae Anabaena flos-aquae occurred in the lower 20 miles of the Tualatin River in northwestern Oregon between July 7 and July 17, 2008. The floating bloom was deemed a hazard to recreational users of the river due to the potential production of algal toxins (anatoxin- a and microcystin), and a public health advisory was posted for the lower 10.8 miles of the river by the Oregon Department of Human Services for July 12–25, 2008. The bloom caused nuisance taste and odor issues and required modified drinking-water treatment techniques where water was withdrawn for municipal uses in the upper reaches of the Tualatin River, some 46 miles upstream of the worst algae problems. Using water sample data from Clean Water Services and the Joint Water Commission, and continuous and discrete monitoring data from the U.S. Geological Survey, the source of the anomalous water-quality conditions and the likely source of the Anabaena bloom was traced upstream to discharges from the Wapato Lake agricultural area near Gaston, Oregon, in the upper part of the watershed near river mile 60. The Wapato Lake algae bloom occurred as standing water remained on the lakebed far longer than normal—into early summer. A failure of the levee on the edge of Wapato Lake in December 2007 caused by heavy rainfall and high water in the canal outside the levee inundated the lakebed to a depth of 7–9 feet, storing thousands of acre-feet more water than its normal winter volume. The water could not be pumped out until the levee was repaired or river levels receded, thus delaying drainage of the lake until summer and facilitating the bloom. In normal summers, the lower Tualatin River grows a moderate crop of algae that responds strongly to streamflow (residence time), light available for photosynthesis, and phosphorus concentrations. In 2008, however, inoculation of the river with phytoplankton and zooplankton discharged from Wapato Lake some 30 miles upstream of the lower, pooled reach of the river demonstrated the importance of upstream factors on plankton communities and water-quality conditions in the Tualatin River. The Wapato Lake algae bloom of July 2008 provided useful information and lessons for agencies managing public health, wetlands, agricultural activities, and water quality in the Tualatin River basin and similar river basins elsewhere. The results and insights derived from this study can be used to enhance future monitoring and data collection strategies designed to improve water quality and plankton models and better predict dissolved-oxygen concentrations in the lower Tualatin River.

Oregon↗

Physical characteristics of the lower San Joaquin River, California, in relation to white sturgeon spawning habitat, 2011–14

The U.S. Fish and Wildlife Service confirmed that white sturgeon ( Acipenser transmontanus ) recently spawned in the lower San Joaquin River, California. Decreases in the San Francisco Bay estuary white sturgeon population have led to an increased effort to understand their migration behavior and habitat preferences. The preferred spawning habitat of other white sturgeon (for example, those in the Columbia and Klamath Rivers) is thought to be areas that have high water velocity, deep pools, and coarse bed material. Coarse bed material (pebbles and cobbles), in particular, is important for the survival of white sturgeon eggs and larvae. Knowledge of the physical characteristics of the lower San Joaquin River can be used to preserve sturgeon spawning habitat and lead to management decisions that could help increase the San Francisco Bay estuary white sturgeon population. Between 2011 and 2014, the U.S. Geological Survey, in cooperation with the U.S. Fish and Wildlife Service, assessed selected reaches and tributaries of the lower river in relation to sturgeon spawning habitat by (1) describing selected spawning reaches in terms of habitat-related physical characteristics (such as water depth and velocity, channel slope, and bed material) of the lower San Joaquin River between its confluences with the Stanislaus and Merced Rivers, (2) describing variations in these physical characteristics during wet and dry years, and (3) identifying potential reasons for these variations. The lower San Joaquin River was divided into five study reaches. Although data were collected from all study reaches, three subreaches where the USFWS collected viable eggs at multiple sites in 2011–12 from Orestimba Creek to Sturgeon Bend were of special interest. Water depth and velocity were measured using two different approaches—channel cross sections and longitudinal profiles—and data were collected using an acoustic Doppler current profiler. During the first year of data collection (water year 2011), runoff was greatest, and gaged streamflow, measured as discharge, peaked at 875 cubic meters per second in the lower San Joaquin River. Also during that year, water velocity was generally between 0.6 and 0.9 meters per second, and depth was typically between 2.5 and 4.5 meters, but water depth exceeded 6 meters in several pools. Water year 2011 was classified as a “ wet ” year. Later water years were classified as either “ dry ” (water year 2012) or “ critical ” (water years 2013 and 2014). During the drier years, water was shallower, and velocities were slower. The streambed aggraded in several areas during the study. At Sturgeon Bend, for example, which had the deepest pool measured in 2011 (maximum depth was 14 meters), about 8 meters of sediment was deposited by 2014. The bed of the lower San Joaquin River was predominately sand, except in areas downstream from the mouth of Del Puerto Creek. A large amount of sand, gravel, and cobble was deposited at the mouth of Del Puerto Creek, and in the 9.5 kilometers downstream from the mouth of Del Puerto Creek, we encountered several gravel bars and patches of gravel-size (8–64 millimeters) bed material. Del Puerto and Orestimba Creeks drain from the Coast Ranges on the west side of the river. Only small quantities of gravel-size bed material were observed in the reach downstream from Orestimba Creek, indicating Orestimba Creek does not deliver much coarse sediment to the lower San Joaquin River. Del Puerto Creek appeared to be the primary source of gravels suitable for white sturgeon spawning in the lower San Joaquin River, and thus, it is important for the long-term spawning success of sturgeon in the San Joaquin River.

California↗

Assessment of Columbia and Willamette River flood stage on the Columbia Corridor Levee System at Portland, Oregon, in a future climate

To support Levee Ready Columbia’s (LRC’s) effort to re-certify levees along the Columbia and Willamette Rivers and remain accredited, two 2-dimensional hydraulic models, Adaptive Hydraulics and Delft3D-Flexible Mesh, were used to simulate the effects of plausible extreme high water during the 2030 to 2059 period. The Columbia River was simulated from Bonneville Dam, situated at river mile (RM) 145, to the mouth of Columbia River, and the Willamette River was simulated from Willamette Falls, RM 26.2, to the Columbia River confluence. Inputs to the models included light detection and ranging (lidar) and bathymetric mapping data to determine bed level, and boundary conditions in the form of daily inflow hydrographs and water levels in the ocean offshore of the mouth of the Columbia River. Future conditions were based on climate science data developed by the U.S. Army Corps of Engineers and others. These conditions included future streamflow and coastal ocean water levels. The hypothetical, extreme but plausible, upstream boundary was based on scaling up the hydrographs from the 1996 flood. Scaling factors were determined by comparing the peak flow rankings determined from flood frequency analyses of historical unregulated periods and 2040s simulated unregulated winter streamflow. The comparison resulted in scaling up the Columbia River hydrograph by 40-percent and scaling up the Willamette River and Lower Columbia River tributaries hydrographs by 20-percent. The downstream ocean boundary was based on a combination of sea-level change, high tide, and storm surge. The models were calibrated for two historical periods: (1) from January 15 to February 28, 1996, and (2) from April 12 to July 12, 1997. The two models compared well to the measured water-surface elevation over the historical periods and had good performance statistics, with root-mean square error ranging from 0.085 to 0.32 meters, Nash-Sutcliffe values greater than 0.96, and bias ranging from -0.03 to 0.28 meters. The simulated peak stage in the Columbia River at Vancouver, Washington, for 1996 was 9.60 and 9.98 meters (31.5 and 32.7 feet) compared to the measured peak of 9.89 meters (32.5 feet). Future peak stage then was simulated with boundary conditions representing extreme but plausible future conditions at the inflow sites and the ocean boundary. The two calibrated models compared well in their simulations of extreme but plausible future conditions. For the 0-meter sea-level change scenario, the simulated peak stage in the Columbia River at Vancouver was 11.15 and 11.39 meters (36.6 and 37.4 feet); and for the 1-meter sea-level change scenario, the simulated peak stage in the Columbia River was 11.25 and 11.54 meters (36.9 and 37.9 feet). The total increase in stage as compared to the 1996 measured peak stage ranged from 1.26 to 1.65 meters (4.13 to 5.40 feet).

Oregon↗

Modeling Escherichia coli in the Missouri River near Omaha, Nebraska, 2012–16

The city of Omaha, Nebraska, has a combined sewer system in some areas of the city. In Omaha, Nebr., a moderate amount of rainfall will lead to the combination of stormwater and untreated sewage or wastewater being discharged directly into the Missouri River and Papillion Creek and is called a combined sewer overflow (CSO) event. In 2009, the city of Omaha began the implementation of their Long Term Control Plan (LTCP) to mitigate the effects of CSOs on the Missouri River and Papillion Creek. As part of the LTCP, the city partnered with the U.S. Geological Survey (USGS) in 2012 to begin monitoring in the Missouri River. Since 2012, monthly discrete water-quality samples for many constituents have been collected from the Missouri River at four sites. At 3 of the 4 sites, water quality has been monitored continuously for selected constituents and physical properties. These discrete water-quality samples and continuous water-quality monitoring data (from July 2012 to 2020) have been collected to better understand the water quality of the Missouri River, how it is changing with time, how it changes upstream from the city of Omaha to downstream, and how it varies during base-flow conditions and during periods of runoff. The purpose of this report is to document the development of Escherichia coli ( E. coli ) concentration models for these four Missouri River sites. Analysis was completed using the first 5 years of data (through 2016) to determine if the current approach is sufficient to meet future analysis goals and to understand if proposed models such as Load Estimator (LOADEST) models will be able to represent water-quality changes in the Missouri River. Multiple linear regression models were developed to estimate E. coli concentration using LOADEST as implemented in the rloadest package in the R statistical software program. A set of explanatory variables, including streamflow and streamflow anomalies, precipitation, information about CSOs, and continuous water quality, were evaluated for potential inclusion in regression models. The best model at Missouri River at NP Dodge Park at Omaha, Nebr. (USGS station 412126095565201; hereafter “NP Dodge”) included basin explanatory variables of upstream antecedent precipitation index measured at Tekamah, Nebr.; decimal time; season; and turbidity. The best model at Missouri River at Freedom Park Omaha, Nebr. (USGS station 411636095535401; hereafter “Freedom Park”) included the same explanatory variables as the NP Dodge model with the addition of turbidity anomalies and flow anomalies. The best models at the two downstream sites (Missouri River near Council Bluffs, Iowa, USGS station 06610505 and Missouri River near La Platte, Nebr., USGS station 410333095530101) included the same explanatory variables as the Freedom Park model with the addition of local antecedent precipitation index as measured at Eppley Airport in Omaha, Nebr., and additional turbidity and flow anomalies. The final selected models were the best models given our modeling design constraint in which explanatory variables included in the model for the upstream site were included in the downstream models. Explanatory variables currently (2020) being collected and included in the selected models through 2016 explained 64–75 percent of the variability of E. coli concentration in the Missouri River. Explaining 64–75 percent of the variability might be considered low when working with physical constituents (total nitrogen or sediment), but with the natural variability of biological constituents such as E. coli , the uncertainty of E. coli laboratory measurements, and the added complexity of modeling in a large drainage basin with multiple sources, these results are adequate and indicate that the explanatory variables being collected and models such as LOADEST can represent water-quality changes in the Missouri River for E. coli concentration from 2012 to 2016.

Nebraska↗

Hydrology and geomorphology of the Taiya River near the West Creek Tributary, southeast Alaska

The Taiya River flows through the Chilkoot Trail Unit of Klondike Gold Rush National Historical Park in southeast Alaska, which was founded to preserve cultural and historical resources and further understanding of natural processes active in the surrounding coastal-to-subarctic basin. Riverine processes exert an important influence on ecologically important boreal toad ( Anaxryus boreas boreas ), salmon [chum salmon ( Oncorhynchus keta ), pink salmon ( O. gorbushca ), and coho salmon ( O. kisutch )], and eulachon ( Thaleichthys pacificus ) habitats, erosion of the historic ghost town of Dyea and other cultural and historical artifacts, and recreational opportunities in the lower 7.5 kilometers (km) of the Taiya River valley bottom. Recurrent consideration of hydroelectric development in West Creek upstream of the park since the 1980s has included proposals for damming and diverting West Creek, which could alter the delivery of water and sediment to this section of the Taiya River. To improve understanding of the hydrologic dependence of park resources for the purposes of guiding effective monitoring and conservation, this study, conducted by the U.S. Geological Survey in cooperation with the National Park Service, used a review of hydrologic data, collection of discrete suspended sediment data, geomorphic mapping, and analysis of historical aerial and ground photographs in a reconnaissance of formative geomorphic processes and hydrologic conditions in the lower 7.5 km of the Taiya River valley bottom. Streamflow and suspended sediment data collected at the U.S. Geological Survey streamgages on the Taiya River and West Creek, combined with historical data, document conditions consistent with streams draining strongly glacierized basins in Alaska. Suspended sediment concentrations from samples collected concurrently over six varying flow levels during 2017–18 ranged from 6 to 284 milligrams per liter (mg/L) for the Taiya River and 13 to 162 mg/L for West Creek, which are similar to or slightly higher than historical values. For the common period of record (1970–77), correlation of daily mean discharge between the two streams was strongest (Pearson’s r = 0.97) during the prolonged May–October high-flow season and weakest ( r = 0.90) during the November–April low-flow season, when West Creek daily mean discharge was proportionally higher. For the Taiya River, streamflow data compared between the available periods of record (1970–77 and 2004–17) showed no decadal-scale patterns in mean annual discharge but did show a shift toward an earlier spring snowmelt pulse. Notable flooding in the Taiya River Basin includes glacial lake outburst floods from the Nourse River valley prior to and during the 1897–98 Gold Rush, a 2002 glacial lake outburst flood from the West Creek valley, and a 1967 rainfall-generated flood. Geomorphic mapping identified four categories of surfaces in the valley bottom—active main stem, abandoned main stem, alluvial fans, and emergent tidal surfaces. Using the maps, main-stem surfaces were subdivided into age categories to identify channel migration patterns from prior to 1940s to 2018. The valley bottom is dominated by active or abandoned channels of the Taiya River except at the extensive low-angle West Creek fan. The active main stem presently supports a mostly single-thread channel with bars and a few sloughs, but the channel actively moved and sometimes was braided within multiple, wider unvegetated corridors in 1894 and earlier. An inventory of 29 off-main-stem channels identified for the study indicates that abandoned main stem channels provide local topographic lows that can intercept groundwater or sustain tributary flow, facilitating the formation of most nonestuarine wetlands in the valley and sustaining important boreal toad breeding habitat. Within the active main stem corridor, the channel has episodically built and reworked meanders and bars, eroding more than one-half of the historic Dyea townsite, in response to glacially controlled delivery of water and sediment, flooding, inputs from West Creek, local features including large woody debris and beaver dams, and rapid uplift from isostatic rebound. West Creek has constructed a large, persistent fan, provoked kilometer-scale Taiya River channel change near the confluence, constructively added to high-season streamflow that affects Taiya River channel migration capacity, disproportionately contributed early-season streamflow, and possibly contributed to groundwater levels in the valley bottom. The progressive narrowing and stability of the main stem corridor, possibly a result of reduction in the magnitude or frequency of glacial lake outburst floods or glacial sediment delivery to streams, indicates less active future reworking of abandoned main-stem surfaces or regeneration of wetland features. The fluvial history of the Taiya River valley bottom collectively indicates continued channel change within a limited corridor, relative stability in wetland locations but uncertainty in stability of groundwater supply to them, and channel incision and extension in response to uplift.

Alaska↗

Historical hydrologic and geomorphic conditions on the Black River and selected tributaries, Arkansas and Missouri

The Black River flows through southeast Missouri and northeast Arkansas to its confluence with the White River in Arkansas. The U.S. Army Corps of Engineers operates Clearwater Dam on the Black River and a series of dams in the White River Basin primarily for flood control. In this study, the hydrology and geomorphology of the Black River are examined through an analysis of annual mean and peak discharges at streamgages, a specific stage analysis of stage and discharge at streamgages, and an examination of bathymetric data and aerial imagery. Five streamgages on the Black River were analyzed, in addition to four streamgages on Black River tributaries and one streamgage on the White River, located just downstream from the Black River confluence. The analyses indicated that regulation of discharges at the flood-control dams caused a decrease in the magnitude and variability of the peak discharges at several of the analyzed gages on the Black and White Rivers. Conversely, peak discharges on the Black River have been increasing since water year 2000, though this is not matched by an increase in peak discharges on the White River for the same time period. The specific stage analyses and the available morphologic data generally did not indicate pronounced changes in stage-discharge relations at streamgages on the Black River, with the exception of the gages nearest to Clearwater Dam.

Arkansas, Missouri↗

Historical changes to channel planform and bed elevations downstream from dams along Fall Creek and Middle Fork Willamette River, Oregon, 1926–2016

Operation of large, multipurpose dams within the Middle Fork Willamette River Basin, Oregon, including the Fall Creek sub-basin, have disrupted natural streamflow and sediment transport regimes and fish passage along the river corridors. Documenting channel morphology, including channel planform, landforms, vegetation cover, and river channel elevations at multiple points in time spanning the 20th and early 21st centuries, is useful for characterizing net changes occurring in response to construction and operation of these dams. The U.S. Geological Survey assessed historical channel changes that occurred within the past century in response to the construction and operation of flood-control dams by evaluating planimetric datasets (from 1926 plan and profile surveys and 1936 and 2016 aerial photographs) and elevation datasets (from 1926 plan and profile surveys and 2015 light detection and ranging [lidar]). This study specifically focuses on the lower 27.3 kilometers (km) of the Middle Fork Willamette River and the lower 11.5 km of Fall Creek, or the reaches downstream from the U.S. Army Corps of Engineers Dexter Dam and Fall Creek Dam, to the confluence with Coast Fork Willamette River. Altogether, compilation and evaluation of datasets for Fall Creek and the Middle Fork Willamette River downstream from the dams provide a foundation for understanding: channel morphology and patterns of geomorphic stability prior to dam construction in 1926 and 1936; channel morphology and patterns of lateral and vertical stability of the early 21st century that reflect present-day (post-dam) streamflow and sediment regimes as of 2015–16; and geomorphic transformations of the river corridors in the decades following dam construction, including changes in planform and bed elevation (determined from water-surface elevations). Findings from this study can be used to provide historical and geomorphic context for geomorphic responses to deep reservoir drawdowns on Fall Creek Lake that mobilize reservoir sediment downstream and informing other restoration and river-management activities; this report summarizes one component of a larger research effort to document the magnitude and spatial distribution of geomorphic responses to sediment releases from draining Fall Creek Lake. As of 2016, the modern Fall Creek flows through a narrow, semi-alluvial channel that efficiently conveys water and sediment at typical streamflows downstream from Fall Creek Dam. This channel planform, including the positions and distributions of bars and secondary water features (side channels, alcoves, and ponds), generally reflects pre-dam conditions in 1936, suggesting relatively modest morphological adjustments resulted from reductions in sediment supply and alterations to peak streamflow after dam construction. The most substantial morphologic change detected over this period was a reduction in unvegetated gravel bars. As of 2016, the modern Middle Fork Willamette River is a large, gravel-bed river that, despite substantial transformations in channel morphology and reduction in lateral dynamism following the construction of multiple upstream dams, remains a dominantly alluvial river. Prior to dam construction in 1926 and 1936, the reaches of the Middle Fork Willamette River downstream from Dexter Dam were laterally active with multi-thread and single-thread channels flanked by large, shifting gravel bars. Since streamflow regulation and other channel modifications in the mid-20th century, these reaches have become less laterally active and encompass a narrower floodplain corridor as abundant former gravel bars were converted to low-elevation floodplains colonized by young, dense forests. The Middle Fork Willamette River downstream from Dexter Dam has remained mostly vertically stable between 1926 and 2015, although localized segments possibly decreased in elevation as much as 2.3 meters.

Oregon↗

Evaluation of stream capture related to groundwater pumping, Lower Humboldt River Basin, Nevada

The Humboldt River Basin is the only river basin that is contained entirely within the State of Nevada. The effect of groundwater pumping on the Humboldt River is not well understood. Tools are needed to determine stream capture and manage groundwater pumping in the Humboldt River Basin. The objective of this study is to estimate capture and storage change caused by groundwater withdrawals in the lower Humboldt River Basin that can provide the Nevada State Engineer with data and information needed to manage groundwater and surface-water resources. A numerical groundwater flow model was developed for the purpose of estimating stream capture from pre-2016 and future pumping as well as for any location of potential future pumping within the lower Humboldt River Basin. This model was developed using MODFLOW-NWT to represent the lower Humboldt River Basin hydrologic system, including Humboldt River; Rye Patch Reservoir; groundwater evapotranspiration; pumping from municipal, agricultural, mining, and domestic wells; and agricultural drains. Aquifer properties were calibrated using results from numerous single- and multi-well aquifer tests (Nadler, 2020) and through the process of model calibration. Historical capture was estimated for 1960–2016 and predictive capture for the system was projected 100 years into the future (2017–2116) based on historical pumping patterns. Stream capture and drain capture are relatively low for the historical and predictive periods. During the historical period, increased pumping during dry years caused increased connections with capture sources and less water sourced to wells from aquifer storage. Storage and groundwater levels generally recovered during subsequent wet years. Overall, storage change has been the main source of water to wells in the lower Humboldt River Basin, followed by groundwater evapotranspiration capture. During the predictive period, pumping is projected to remain constant and capture 9 percent of stream water after 100 years. Capture and storage change maps were created to visualize spatial variability in potential capture and storage change through time and to provide a database of results that can be used to manage groundwater and surface-water resources. These maps show that potential stream capture would be a minor source of water to wells located across most of the simulated area, except for locations close to the Humboldt River and Rye Patch Reservoir. Drains also would be a minor potential source of water to wells except for those directly adjacent to the drains. In general, the potential supply of water to wells is storage-dominated and over time groundwater evapotranspiration-dominated in the agricultural area. Capture difference maps were generated to visualize where potential capture results might have greater limitations associated with nonlinear flow processes, such as head-dependent boundary conditions. Higher capture differences indicate larger capture map bias and therefore greater capture map uncertainty due to the inability of capture maps to account for nonlinear flow processes. Stream capture differences are highest directly adjacent to the river but are otherwise minimal. Drain capture differences are highest in the region of the agricultural drain network but are otherwise minimal. The Humboldt River, Rye Patch Reservoir, and drains introduce very little nonlinearity to the model, and their associated capture map bias is minimal. Potential groundwater evapotranspiration capture introduces a fair amount of nonlinearity to the model and has the potential to result in significant, localized groundwater evapotranspiration capture map bias over time. Groundwater evapotranspiration capture differences are the result of higher pumping rates lowering the water table below the root zone faster than lower pumping rates and essentially removing groundwater evapotranspiration as a potential source of capture faster than lower pumping rates. Wells that can no longer source their supply through groundwater evapotranspiration capture then generally source more of their water from storage. Thus, storage change bias increases over time as well. Capture prediction uncertainty due to parameter estimation was evaluated using a covariance matrix adaptation-evolution strategy. One hundred Monte Carlo realizations of model parameters were applied to the model to assess capture uncertainty at 13 grid cell locations within the model domain. In general, results indicated that greater capture uncertainty for a given source (river, drains, or evapotranspiration) is associated with proximity of a pumping well to that source. The magnitude of maximum capture fraction uncertainties after 100 years of pumping for stream capture, drain capture, groundwater evapotranspiration capture, and storage change were plus or minus (±) 0.17, ±0.10, ±0.20, and ±0.22, respectively.

Nevada↗

Changes in phosphorus and suspended solids loading in the Fox River, northeastern Wisconsin, 1989–2021

The entire Lower Fox River and inner bay of Green Bay, in northeastern Wisconsin, have been listed as impaired by the Wisconsin Department of Natural Resources (WDNR) for low dissolved oxygen and degraded habitat, with total phosphorus (TP) and total suspended solids (TSS) concentrations listed as the likely causes of these impairments. To restore the Fox River and Green Bay, total maximum daily loads (TMDLs) were developed for TP and TSS, and actions were taken throughout the Fox River Basin to improve water quality. In this study, we estimated concentrations and loads of TP, dissolved phosphorus (DP), and TSS at the Lake Winnebago outlet, De Pere, and the mouth of the Fox River from water year (WY) 1989 to WY 2021; described changes in concentrations and loads through time during this period; and compared the concentrations and loads for the most recent 5-year period (WYs 2017–21) with the WDNR criteria for TP impairment and the TMDL loading goals. TP, DP, TSS, and total suspended sediment concentration data were obtained from NEW Water (the brand of the Green Bay Metropolitan Sewerage District), the WDNR, and the U.S. Geological Survey and combined into one dataset. All the TSS and total suspended sediment data were used together with no adjustment factor and are referred to as simply “TSS.” During WYs 1989–2021, mean annual TP concentrations increased from 0.089 milligram per liter (mg/L) at the Lake Winnebago outlet to 0.128 mg/L at the mouth of the Fox River, and concentrations decreased at all three sites from WY 1989 to WY 2021. The most recent (WYs 2017–21) median May–October TP concentrations were just less than the 0.1-mg/L WDNR criterion for TP impairment at the two upstream sites (Lake Winnebago outlet and De Pere) but were slightly greater than the criterion for impairment at the mouth of the Fox River. Mean annual DP concentrations increased from 0.024 mg/L at the Lake Winnebago outlet to 0.036 mg/L at the mouth of the Fox River. DP concentrations increased from WY 1989 to WY 2021 at the Lake Winnebago outlet but not at the other sites. Mean annual TSS concentrations increased from 13.5 mg/L at the Lake Winnebago outlet to 23.9 mg/L at the mouth of the Fox River and have decreased at all three sites from WY 1989 to WY 2021. The recent median May–October TSS concentrations were less than the 20-mg/L WDNR criterion for impairment at all three sites. Streamflow and TP, DP, and TSS loads increased from the Lake Winnebago outlet to the mouth of the Fox River (TP loads increased from 360,000 to 557,000 kilograms per year [kg/yr], DP loads increased from 114,000 to 162,000 kg/yr, and TSS loads increased from 60,400 metric tons per year [t/yr] to 122,600 t/yr). At the Lake Winnebago outlet, DP concentrations and TP and DP loads increased from WY 1989 to WY 2021 because of an increase in DP concentrations in Lake Winnebago resulting from the lake becoming nitrogen limited as a result of biological processes not consuming the DP in the lake and an increase in streamflow leaving the lake. Although TP and TSS concentrations decreased at De Pere and the mouth of the Fox River, there was little change in the loading because of an increase in flow. Flow-normalized TP and TSS loads at De Pere and the mouth of the Fox River decreased possibly because of implementation of agricultural conservation management practices, reductions in point-source discharges in its drainage basin, and deposition of sediment and phosphorus in recently dredged areas of the Lower Fox River. Additional studies are needed to determine the relative importance of each of these actions and whether the decrease in concentrations and flow-normalized loads will continue to be observed in the Fox River.

Wisconsin↗

Trace metal and phosphorus loading from groundwater seepage into South Fork Coeur d’Alene River after remediation at the Bunker Hill Superfund Site, northern Idaho, 2022

Widely dispersed waste products from historical mining in northern Idaho’s Coeur d’Alene mining district have long been a concern in the Coeur d’Alene River Basin in northern Idaho. The Central Impoundment Area (CIA), an unlined mining waste repository that is part of the Bunker Hill Superfund Site designated in 1983, is adjacent to the South Fork Coeur d’Alene River between Kellogg and Smelterville, Idaho. Previous studies, including a pre-remediation seepage study completed by the U.S. Geological Survey (USGS) in 2017, have identified groundwater seepage from beneath the CIA as a major contributor to trace-metal and nutrient loads (including zinc, cadmium, and phosphorus) in the South Fork Coeur d’Alene River. A major remediation project, led by the U.S. Environmental Protection Agency from late 2017 to 2021, specifically aimed to reduce groundwater loading to the river via a groundwater collection system (GWCS) at the CIA. In 2022, the USGS completed a post-remediation seepage study to quantify zinc, cadmium, and phosphorus loading from groundwater to the South Fork Coeur d’Alene River in the same reach as the 2017 pre-remediation study. Like in the previous USGS study, discharge measurements and water-quality samples were collected during base-flow conditions in the South Fork Coeur d’Alene River between Kellogg and Smelterville as well as in surface-water inputs to the reach. Results of this study show a reduction in groundwater loads of dissolved zinc, dissolved cadmium, and total phosphorus entering the South Fork Coeur d’Alene River compared to 2017. The largest reductions in groundwater loading to the South Fork Coeur d’Alene River occurred in a discrete section (the middle section) of the reach adjacent to the CIA where the GWCS was expected to have the biggest impact. In the South Fork Coeur d’Alene River middle section, loads from groundwater (presented as a mean plus or minus [±] standard deviation) of dissolved zinc decreased from 85 ± 9.3 kilograms per day (kg/d) in 2017 to 11.6 ± 19.2 kg/d in 2022 (86-percent reduction), dissolved cadmium decreased from 0.59 ± 0.10 kg/d in 2017 to 0.11 ± 0.06 kg/d in 2022 (81-percent reduction), and total phosphorus decreased from 6.5 ± 0.45 kg/d in 2017 to 0.79 ± 0.97 kg/d in 2022 (88-percent reduction). In addition to reduced groundwater loading, lower concentrations of dissolved zinc, dissolved cadmium, and total phosphorus were observed at the site farthest downstream from the GWCS. Furthermore, the ambient water-quality-criteria ratios decreased at all river monitoring sites in 2022, although zinc and cadmium concentrations still exceeded the site-specific criteria designated to protect aquatic life. This post-remediation study indicates that the GWCS at the CIA has reduced groundwater loading of trace metals and phosphorus to the South Fork Coeur d’Alene River. This reduction in trace metals and phosphorus in South Fork Coeur d’Alene River also has implications for water quality downstream in the main-stem Coeur d’Alene River and in Coeur d’Alene Lake.

Idaho↗