SEARCH · USGS Science

Results for “Functional Ecology”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

SourceResearch connectionFrom yearThrough year

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 1,423 records · Page 79Linked to original sources

USGS2024

Adaptive resource management: Achieving functional eradication of invasive snakes to benefit avian conservation

Natural resource management often co-occurs with considerable uncertainty. One approach to mitigating uncertainty is through adaptive resource management (ARM), a specialized form of structured decision-making that modifies management decisions or actions through monitoring and implementation. Here, we present a case study on the attempted eradication of an invasive brown treesnake ( Boiga irregularis ) in a 5-ha enclosure on Guam with uncertainty in approach. We applied an ARM process across three field phases of snake removal and evaluated whether (1) eradication was achievable and (2) eradication was necessary to achieve an avian response. Field phases included the application of aerial toxic baits, toxicant baiting large mouse and birds, trapping with live mouse and bird lures and hand capture. We found that each removal technique improved control by either removing many individuals or targeting a subset of individuals that resisted prior control approaches. Although the effort did not result in eradication, the evaluation of identified indicators allowed for timely adjustments to removal using the ARM process. The snake removal efforts yielded an avian response in the treatment area after integrating live birds as snake lures, suggesting functional eradication of snakes may be possible. We also, however, observed a release of invasive rodents following snake control, with birds being more sensitive to the presence of snakes than rodents. Synthesis and applications . We suggest that using adaptive resource management to evaluate each phase of action in relation to established goals allowed us to measure outcomes and was successful in eliminating uncertainty in the application of control tools for wildlife conservation. We were able to create a documented and successful approach towards removing snakes inside a snake-exclusion barrier by following the ARM process.

Journal of Applied Ecology↗

USGS2024

Effect of invasive plant removal on the density of Peromyscus sonoriensis (western deer mice) in Point Reyes National Seashore, California, USA.

Non-native plants can affect communities through direct competition, and by providing refuge to seed predators, creating apparent competition with native plants. Ammophila arenaria (European beachgrass) has been introduced to coastal dune habitats throughout the western United States where it forms dense monocultures, stabilizes dunes, and alters abiotic and biotic conditions. The dominance of European beachgrass has been linked to declines of Lupinus tidestromii (Tidestrom’s lupine), an herb endemic to coastal dune communities in central and northern California. Peromyscus sonoriensis (western deer mice), a native seed predator, use beachgrass as refuge from predators. Tidestrom’s lupine plants near European beachgrass stands experience greater predation pressure from deer mice. At Point Reyes National Seashore, California, USA (PRNS), mechanical removal, manual pulling, and herbicide treatment have been used to reduce the density of European beachgrass near Tidestrom’s lupine populations. We trapped deer mice at five sites in PRNS that experienced different management regimes and used spatially-explicit capture-recapture models to estimate deer mouse density as a function of site and habitat treatment. We found that deer mouse density was lowest in areas where European beachgrass was mechanically removed and in herbicide-treated foredunes, and highest in areas highly invaded by European beachgrass and Carpobrotus spp. (iceplant). The density of deer mice increased from 2021 to 2022 at every site except one that underwent extensive mechanical removal of European beachgrass from 2010-2011. This study shows enduring effects of European beachgrass removal on the density of a native seed predator and highlights the importance of habitat management for conservation of Tidestrom’s lupine.

California↗

USGS2024

Trajectories and tipping points of piñon–juniper woodlands after fire and thinning

Piñon–juniper (PJ) woodlands are a dominant community type across the Intermountain West, comprising over a million acres and experiencing critical effects from increasing wildfire. Large PJ mortality and regeneration failure after catastrophic wildfire have elevated concerns about the long-term viability of PJ woodlands. Thinning is increasingly used to safeguard forests from fire and in an attempt to increase climate resilience. We have only a limited understanding of how fire and thinning will affect the structure and function of PJ ecosystems. Here, we examined vegetation structure, microclimate conditions, and PJ regeneration dynamics following ~20 years post-fire and thinning treatments. We found that burned areas had undergone a state shift that did not show signs of returning to their previous state. This shift was characterized by (1) distinct plant community composition dominated by grasses; (2) a lack of PJ recruitment; (3) a decrease in the sizes of interspaces in between plants; (4) lower abundance of late successional biological soil crusts; (5) lower mean and minimum daily soil moisture values; (6) lower minimum daily vapor pressure deficit; and (7) higher photosynthetically active radiation. Thinning created distinct plant communities and served as an intermediate between intact and burned communities. More intensive thinning decreased PJ recruitment and late successional biocrust cover. Our results indicate that fire has the potential to create drier and more stressful microsite conditions, and that, in the absence of active management following fire, there may be shifts to persistent ecological states dominated by grasses. Additionally, more intensive thinning had a larger impact on community structure and recruitment than less intensive thinning, suggesting that careful consideration of goals could help avoid unintended consequences. While our results indicate the vulnerability of PJ ecosystems to fire, they also highlight management actions that could be adapted to create conditions that promote PJ re-establishment.

Colorado↗

USGS2015

A predictive model to inform adaptive management of double-crested cormorants and fisheries in Michigan

The proliferation of double-crested cormorants (DCCOs; Phalacrocorax auritus ) in North America has raised concerns over their potential negative impacts on game, cultured and forage fishes, island and terrestrial resources, and other colonial water birds, leading to increased public demands to reduce their abundance. By combining fish surplus production and bird functional feeding response models, we developed a deterministic predictive model representing bird–fish interactions to inform an adaptive management process for the control of DCCOs in multiple colonies in Michigan. Comparisons of model predictions with observations of changes in DCCO numbers under management measures implemented from 2004 to 2012 suggested that our relatively simple model was able to accurately reconstruct past DCCO population dynamics. These comparisons helped discriminate among alternative parameterizations of demographic processes that were poorly known, especially site fidelity. Using sensitivity analysis, we also identified remaining critical uncertainties (mainly in the spatial distributions of fish vs. DCCO feeding areas) that can be used to prioritize future research and monitoring needs. Model forecasts suggested that continuation of existing control efforts would be sufficient to achieve long-term DCCO control targets in Michigan and that DCCO control may be necessary to achieve management goals for some DCCO-impacted fisheries in the state. Finally, our model can be extended by accounting for parametric or ecological uncertainty and including more complex assumptions on DCCO–fish interactions as part of the adaptive management process.

Natural Resource Modeling↗

USGS2015

How big of an effect do small dams have? Using geomorphological footprints to quantify spatial impact of low-head dams and identify patterns of across-dam variation

Longitudinal connectivity is a fundamental characteristic of rivers that can be disrupted by natural and anthropogenic processes. Dams are significant disruptions to streams. Over 2,000,000 low-head dams (<7.6 m high) fragment United States rivers. Despite potential adverse impacts of these ubiquitous disturbances, the spatial impacts of low-head dams on geomorphology and ecology are largely untested. Progress for research and conservation is impaired by not knowing the magnitude of low-head dam impacts. Based on the geomorphic literature, we refined a methodology that allowed us to quantify the spatial extent of low-head dam impacts (herein dam footprint), assessed variation in dam footprints across low-head dams within a river network, and identified select aspects of the context of this variation. Wetted width, depth, and substrate size distributions upstream and downstream of six low-head dams within the Upper Neosho River, Kansas, United States of America were measured. Total dam footprints averaged 7.9 km (3.0–15.3 km) or 287 wetted widths (136–437 wetted widths). Estimates included both upstream (mean: 6.7 km or 243 wetted widths) and downstream footprints (mean: 1.2 km or 44 wetted widths). Altogether the six low-head dams impacted 47.3 km (about 17%) of the mainstem in the river network. Despite differences in age, size, location, and primary function, the sizes of geomorphic footprints of individual low-head dams in the Upper Neosho river network were relatively similar. The number of upstream dams and distance to upstream dams, but not dam height, affected the spatial extent of dam footprints. In summary, ubiquitous low-head dams individually and cumulatively altered lotic ecosystems. Both characteristics of individual dams and the context of neighboring dams affected low-head dam impacts within the river network. For these reasons, low-head dams require a different, more integrative, approach for research and management than the individualistic approach that has been applied to larger dams.

PLoS ONE↗

USGS2004

Estimating survival and breeding probability for pond-breeding amphibians: a modified robust design

Many studies of pond-breeding amphibians involve sampling individuals during migration to and from breeding habitats. Interpreting population processes and dynamics from these studies is difficult because (1) only a proportion of the population is observable each season, while an unknown proportion remains unobservable (e.g., non-breeding adults) and (2) not all observable animals are captured. Imperfect capture probability can be easily accommodated in capture-recapture models, but temporary transitions between observable and unobservable states, often referred to as temporary emigration, is known to cause problems in both open- and closed-population models. We develop a multistate mark-recapture (MSMR) model, using an open-robust design that permits one entry and one exit from the study area per season. Our method extends previous temporary emigration models (MSMR with an unobservable state) in two ways. First, we relax the assumption of demographic closure (no mortality) between consecutive (secondary) samples, allowing estimation of within-pond survival. Also, we add the flexibility to express survival probability of unobservable individuals (e.g., ‘ ‘non-breeders’ ’ ) as a function of the survival probability of observable animals while in the same, terrestrial habitat. This allows for potentially different annual survival probabilities for observable and unobservable animals. We apply our model to a relictual population of eastern tiger salamanders ( Ambystoma tigrinum tigrinum ). Despite small sample sizes, demographic parameters were estimated with reasonable precision. We tested several a priori biological hypotheses and found evidence for seasonal differences in pond survival. Our methods could be applied to a variety of pond-breeding species and other taxa where individuals are captured entering or exiting a common area (e.g., spawning or roosting area, hibernacula).

Ecology↗

USGS1998

The ichnologic record of the continental invertebrate invasion; evolutionary trends in environmental expansion, ecospace utilization, and behavioral complexity

The combined study of continental trace fossils and associated sedimentary facies provides valuable evidence of colonization trends and events throughout the Phanerozoic. Colonization of continental environments was linked to the exploitation of empty or under-utilized ecospace. Although the nonmarine trace fossil record probably begins during the Late Ordovician, significant invasion of nonmarine biotopes began close to the Silurian-Devonian transition with the establishment of a mobile arthropod epifauna (Diplichnites ichnoguild) in coastal marine to alluvial plain settings. Additionally, the presence of vertical burrows in Devonian high-energy fluvial deposits reflects the establishment of a stationary, deep suspension-feeding infauna of the Skolithos ichnoguild. The earliest evidence of plant-arthropod interaction occurred close to the Silurian-Devonian boundary, but widespread and varied feeding patterns are known from the Carboniferous. During the Carboniferous, permanent subaqueous lacustrine settings were colonized by a diverse, mobile detritus-feeding epifauna of the Mermia ichnoguild, which reflects a significant palaeoenvironmental expansion of trace fossils. Paleozoic ichnologic evidence supports direct routes to the land from marginal marine environments, and migration to lakes from land settings. All nonmarine sedimentary environments were colonized by the Carboniferous, and subsequent patterns indicate an increase in ecospace utilization within already colonized depositional settings. During the Permian, back-filled traces of the Scoyenia ichnoguild record the establishment of a mobile, intermediate-depth, deposit-feeding in-fauna in alluvial and transitional alluvial-lacustrine sediment. Diversification of land plants and the establishment of ecologically diverse plant communities through time provided new niches to be exploited by arthropods. Nevertheless, most ot the evolutionary feeding innovations took place relatively early, during the Late Palaeozoic or early Mesozoic. A stationary deep unfauna, the Camborygma ichnoguild, was developed in Triassic transitional alluvial-lacustrinbe deposits. Terrestrial environments hosted the rise of complex social behavioral patterns, as suggested by the probable presence of hymenopteran and isopteran nests in Triassic paleosols. An increase in diversity of trace fossils is detected in Triassic-Jurassic eolian deposits, where the ichnofauna displays more varied behavioral patterns than their Paleozoic counterparts. Also, a mobile, intermediate-depth, deposit-feeding infauna, the Vagorichnus ichnoguild, was established in deep lake environments during the Jurassic. In contrast to Paleozoic permanent subaqueous assemblages typified by surface trails, Jurassic ichnocoenoses are dominated by infaunal burrows. High density of infaunal deposit-feeding traces of the Planolites ichnoguild caused major disruption of lacustrine sedimentary fabrics during the Cretaceous. Most insect mouthpart classes, functional feeding groups, and dietary guilds were established by the end of the Cretaceous. Diversification of modern insects is recorded by the abundance and complexity of structures produced by wasps, bees, dung-beetles, and termites in Cretaceous-Tertiary paleosols. The increase in bioturbation migrated from fluvial and lake-margin settings to permanent subaqueous lacustrine environments through time.

Palaios↗

USGS2014

Applying threshold concepts to conservation management of dryland ecosystems: Case studies on the Colorado Plateau

Ecosystems may occupy functionally distinct alternative states, some of which are more or less desirable from a management standpoint. Transitions from state to state are usually associated with a particular trigger or sequence of triggers, such as the addition or subtraction of a disturbance. Transitions are often not linear, rather it is common to see an abrupt transition come about even though the trigger increases only incrementally; these are examples of threshold behaviors. An ideal monitoring program, such as the National Park Service’s Inventory and Monitoring Program, would quantify triggers, and be able to inform managers when measurements of a trigger are approaching a threshold so that management action can avoid an unwanted state transition. Unfortunately, both triggers and the threshold points at which state transitions occur are generally only partially known. Using case studies, we advance a general procedure to help identify triggers and estimate where threshold dynamics may occur. Our procedure is as follows: (1) Operationally define the ecosystem type being considered; we suggest that the ecological site concept of the Natural Resource Conservation Service is a useful system, (2) Using all available a priori knowledge to develop a state-and-transition model (STM), which defines possible ecosystem states, plausible transitions among them and likely triggers, (3) Validate the STM by verifying the existence of its states to the greatest degree possible, (4) Use the STM model to identify transitions and triggers likely to be detectable by a monitoring program, and estimate to the greatest degree possible the value of a measurable indicator of a trigger at the point that a state transition is imminent (tipping point), and values that may indicate when management intervention should be considered (assessment points). We illustrate two different methods for attaining these goals using a data-rich case study in Canyonlands National Park, and a data-poor case study in Wupatki National Monument. In the data-rich case, STMs are validated and revised, and tipping and assessment points are estimated using statistical analysis of data. In the data-poor case, we develop an iterative expert opinion survey approach to validate the degree of confidence in an STM, revise the model, identify lack of confidence in specific model components, and create reasonable first approximations of tipping and assessment points, which can later be refined when more data are available. Our goal should be to develop the best set of models possible given the level of information available to support decisions, which is often not much. The approach presented here offers a flexible means of achieving this goal, and determining specific research areas in need of study.

Book chapter↗

USGS2011

Tracking nonpoint source nitrogen pollution in human-impacted watersheds

Nonpoint source nitrogen (N) pollution is a leading contributor to U.S. water quality impairments. We combined watershed N mass balances and stable isotopes to investigate fate and transport of nonpoint N in forest, agricultural, and urbanized watersheds at the Baltimore Long-Term Ecological Research site. Annual N retention was 55%, 68%, and 82% for agricultural, suburban, and forest watersheds, respectively. Analysis of δ 15 N-NO 3 – , and δ 18 O-NO 3 – indicated wastewater was an important nitrate source in urbanized streams during baseflow. Negative correlations between δ 15 N-NO 3 – and δ 18 O-NO 3 – in urban watersheds indicated mixing between atmospheric deposition and wastewater, and N source contributions changed with storm magnitude (atmospheric sources contributed &sim;50% at peak storm N loads). Positive correlations between δ 15 N-NO 3 – and δ 18 O-NO 3 – in watersheds suggested denitrification was removing septic system and agriculturally derived N, but N from belowground leaking sewers was less susceptible to denitrification. N transformations were also observed in a storm drain (no natural drainage network) potentially due to organic carbon inputs. Overall, nonpoint sources such as atmospheric deposition, wastewater, and fertilizer showed different susceptibility to watershed N export. There were large changes in nitrate sources as a function of runoff, and anticipating source changes in response to climate and storms will be critical for managing nonpoint N pollution.

Environmental Science & Technology↗

USGS2025

The scientific benefits of a statewide, standardized, coastal wetland monitoring program in Hawaiʻi

In this viewpoint, we provide a scientific justification for a statewide, standardized, coastal wetland monitoring program for Hawaiʻi, USA. Hawaiian coastal wetlands provide important habitat for endangered waterbirds, invertebrates, plants, and the Hawaiian hoary bat (ʻōpeʻapeʻa; Lasiurus semotus ) as well as support Indigenous food systems. Currently, numerous agencies and groups in Hawaiʻi collect data on coastal wetlands, but information is not typically shared and methods are not standardized. A statewide, standardized, coastal wetland monitoring program with a centralized database would allow managers to keep better track of progress toward restoration goals, population changes of conservation-reliant species, outbreaks and impacts of avian botulism, rates of coastal salinization, and many other critical issues across space and time. Monitoring combined with targeted research could fill critical knowledge gaps about the types, functions, values, and biodiversity of Hawaiian coastal wetlands. Ultimately, the improved knowledge gained from long-term coastal wetland monitoring could inform landscape-scale restoration actions and adaptive management of coastal wetlands under sea-level rise and climate change.

Hawaii↗

USGS1997

An energy-circuit population model for great egrets (Ardea alba) at Lake Okeechobee, Florida, U.S.A

I simulated the annual population cycles of Great Egrets ( Ardea alba ) at Lake Okeechobee, Florida, to provide a framework for evaluating the local population dynamics of nesting and foraging wading birds. The external forcing functions were solar energy, minimum air temperature, water depth, surface-water drying rate, and season. Solar input controlled the production of prey at moderate to high lake stages, but water area exerted primary control during a two-year drought. Modeling prey production as a linear function of water area resulted in underestimation of prey density during the drought, suggesting that prey organisms maintained high fecundity while concentrated in submerged vegetation at the lakeward fringe of the littoral zone. Simulation confirmed that large influxes of wading birds during the drought were the combined result of a regional refuge response and the availability of concentrated prey. Modeling immigration and emigration as primarily functions of the surface-water drying rate, rather than lake stage, resulted in a closer match of observed and simulated population trends for foraging birds, suggesting that the pattern of surface-water fluctuations was a more important factor than water depth. Simulation indicated an abrupt-threshold response rather than a linear association between foraging efficiency and low temperatures, which reduce activity levels of forage fishes. Great Egret breeder recruitment is primarily a function of prey availability, climate, and hydrologic trends, but simulation confirmed the concurrent involvement of a seasonal or physiological-readiness factor. An attractor function driven by high winter lake stages was necessary to reproduce observed patterns of breeder recruitment, suggesting that Great Egrets initiate nesting based on environmental cues that lead to peak food availability when nestlings are present. Poor correspondence of reproductive effort and nest productivity suggested that the drought compromised the birds' predictive abilities. The need to model breeder recruitment as a function of a maximum rate rather than the size of the local foraging population suggested that birds may nest on the lake even though on-lake foraging conditions are poor. Simulated and observed estimates of egg and hatching production did not match, suggesting that the causes of failure during incubation were complex or more localized than could be accounted for with lakewide hydrologic and climatic data. A forced increase in prey consumption of 12% was necessary to reproduce observed, high levels of nest productivity in 1990, which corresponded to the finding that panhandled fish constituted 10–12% of the biomass fed to Great Egret nestlings that year.

Florida↗

USGS2003

A Benthic Community Index for streams in the Northern Lakes and Forests Ecoregion

Encompassing the northern glaciated section of the Midwest United States, the Northern Lakes and Forests Ecoregion is characterized by mixed conifer and deciduous forests and wetlands. Sites were randomly selected in the ecoregion using the Environmental Protection Agency's Environmental Monitoring and Assessment Program designed to develop an index of biotic integrity for wadeable streams. Macroinvertebrates were sampled during the fall of 1998 and 1999 using a multi-habitat, composite-sample method. Two hundred forty-six invertebrate taxa in 97 families were collected from 94 sites. Ten of 42 candidate metrics satisfied metric selection criteria, including six structural metrics (number of Ephemeroptera taxa, number of Diptera taxa, richness, Shannon-Wiener diversity, percent Trichoptera abundance, and percent Crustacea and Mollusca abundance), two functional metrics (number of Filterer taxa and number of Scraper taxa), and two conditional metrics (number of Ephemeroptera, Trichoptera, and Plecoptera taxa and Hilsenhoff Biotic Index). These metrics were used to develop a Benthic Community Index to assess the biological integrity of wadeable streams in the ecoregion. Index values ranged from 10 to 50, and scores from impaired sites were significantly different than non-impaired sites (P<0.001). Index values were divided into three narrative interpretations of biological integrity (poor, fair, and good). After further testing, the index may provide a useful biological assessment tool for resource managers in the ecoregion.

Ecological Indicators↗

USGS2015

Female sea lamprey shift orientation toward a conspecific chemical cue to escape a sensory trap

The sensory trap model of signal evolution hypothesizes that signalers adapt to exploit a cue used by the receiver in another context. Although exploitation of receiver biases can result in conflict between the sexes, deceptive signaling systems that are mutually beneficial drive the evolution of stable communication systems. However, female responses in the nonsexual and sexual contexts may become uncoupled if costs are associated with exhibiting a similar response to a trait in both contexts. Male sea lamprey ( Petromyzon marinus ) signal with a mating pheromone, 3-keto petromyzonol sulfate (3kPZS), which may be a match to a juvenile cue used by females during migration. Upstream movement of migratory lampreys is partially guided by 3kPZS, but females only move toward 3kPZS with proximal accuracy during spawning. Here, we use in-stream behavioral assays paired with gonad histology to document the transition of female preference for juvenile- and male-released 3kPZS that coincides with the functional shift of 3kPZS as a migratory cue to a mating pheromone. Females became increasingly biased toward the source of synthesized 3kPZS as their maturation progressed into the reproductive phase, at which point, a preference for juvenile odor (also containing 3kPZS naturally) ceased to exist. Uncoupling of female responses during migration and spawning makes the 3kPZS communication system a reliable means of synchronizing mate search. The present study offers a rare example of a transition in female responses to a chemical cue between nonsexual and sexual contexts, provides insights into the origins of stable communication signaling systems.

Behavioral Ecology↗

USGS2004

Stream salamanders as indicators of stream quality in Maryland, USA

Biological indicators are critical to the protection of small, headwater streams and the ecological values they provide. Maryland and other state monitoring programs have determined that fish indicators are ineffective in small streams, where stream salamanders may replace fish as top predators. Because of their life history, physiology, abundance, and ubiquity, stream salamanders are likely representative of biological integrity in these streams. The goal of this study was to determine whether stream salamanders are effective indicators of ecological conditions across biogeographic regions and gradients of human disturbance. During the summers of 2001 and 2002, we intensively surveyed for stream salamanders at 76 stream sites located west of the Maryland Coastal Plain, sites also monitored by the Maryland Biological Stream Survey (MBSS) and City of Gaithersburg. We found 1,584 stream salamanders, including all eight species known in Maryland, using two 15 ? 2 m transects and two 4 m2 quadrats that spanned both stream bank and channel. We performed removal sampling on transects to estimate salamander species detection probabilities, which ranged from 0.67-0.85. Stepwise regressions identified 15 of 52 non-salamander variables, representing water quality, physical habitat, land use, and biological conditions, which best predicted salamander metrics. Indicator development involved (1) identifying reference (non-degraded) and degraded sites (using percent forest, shading, riparian buffer width, aesthetic rating, and benthic macroinvertebrate and fish indices of biotic integrity); (2) testing 12 candidate salamander metrics (representing species richness and composition, abundance, species tolerance, and reproductive function) for their ability to distinguish reference from degraded sites; and (3) combining metrics into an index that effectively discriminated sites according to known stream conditions. Final indices for Highlands, Piedmont, and Non-Coastal Plain regions comprised four metrics: number of species, number of salamanders, number of intolerant salamanders, and number of adult salamanders, producing classification efficiencies between 87% and 90%. Partial validation of these indices was obtained when a test of the number of salamanders metric produced an 82% correct classification of 618 MBSS sites surveyed in 1995-97. This study supports the use of stream salamander monitoring and a composite stream salamander index of biotic integrity (SS-IBI) to determine stream quality in Maryland.

Applied Herpetology↗

USGS2023

Density-habitat relationships of white-tailed deer (Odocoileus virginianus) in Finland

In heterogeneous landscapes, resource selection constitutes a crucial link between landscape and population-level processes such as density. We conducted a non-invasive genetic study of white-tailed deer in southern Finland in 2016 and 2017 using fecal DNA samples to understand factors influencing white-tailed deer density and space use in late summer prior to the hunting season. We estimated deer density as a function of landcover types using a spatial capture-recapture (SCR) model with individual identities established using microsatellite markers. The study revealed second-order habitat selection with highest deer densities in fields and mixed forest, and third-order habitat selection (detection probability) for transitional woodlands (clear-cuts) and closeness to fields. Including landscape heterogeneity improved model fit and increased inferred total density compared with models assuming a homogenous landscape. Our findings underline the importance of including habitat covariates when estimating density and exemplifies that resource selection can be studied using non-invasive methods.

Ecology and Evolution↗

USGS2024

Evaluating satellite-transmitter backpack-harness effects on greater sage-grouse survival and device retention in the Great Basin

Wildlife tracking studies have become ubiquitous in ecology and now provide previously unobtainable data regarding individual movement, vital rates, and population demographics. However, tracking devices can potentially reduce survival of study subjects, generating biases in the vital rates they seek to measure. Previous studies have found that greater sage-grouse ( Centrocercus urophasianus ) fitted with Global Positioning System (GPS) tracking devices may experience reduced survival, relative to those tracked with traditional radio transmitters, and have documented skin abrasions and lacerations associated with typical backpack-style GPS harnesses. We implemented an experimental study comparing survival and harness retention between 2 different backpack-style GPS transmitter harnesses. We captured female sage-grouse at 3 study sites in the northwest Great Basin of Oregon, Nevada, and California during 2019–2021. We fit each individual, following previously published recommendations, with either a standard backpack harness or a modified harness hypothesized to reduce skin abrasion and laceration. We used known-fate models in Program MARK to model variation in survival and harness retention separately as a function of harness type, year, age, a linear effect of time, and the ratio of the device to individual body mass. Neither survival nor retention varied systematically by harness type, however retention decreased as a function of body mass ratio. We echo previous recommendations for standardized harness attachment protocols and studies designed to isolate and test potential mechanisms by which tracking devices and attachment methods might affect survival and well-being of sage-grouse and other tracked species.

California Nevada, Oregon↗

USGS1989

The ecology of hydric hammocks: a community profile

This community profile is one in a series of Fish and Wildlife Service publications compiled to provide a state-of-knowledge synthesis of scientific information and literature on various coastal habitats. The subject of this profile is the hydric hammock, a distinctive type of forested wetland occurring at low elevations along the gulf coast of Florida from Aripeka to St. Marks and at various inland sites in Florida. Relatively little research has been conducted in hydric hammocks, and no thorough effort has been made previously to define this community. Consequently, no consensus has existed about the extent and nature of this community; some published works and active researchers have differed in their judgments about it; and the entity sometimes is ignored and often is lumped with other types of mixed hardwood forests. The purpose of this profile is to establish or clarify an identification and understanding of the hydric-hammock community. Information for the profile was gathered from published and unpublished literature, from persona 1 communication with many technical experts, and from our own fie 1 d experience. The profile includes some new data gathered in the field for the purpose of defining this community. It is hoped that the content and format of the profile will be useful to a broad spectrum of users, including other scientists, students, resource managers and planners, teachers, and interested citizens. The profile includes structural and functional aspects of the community: its physical setting, plant and animal composition and dynamics, interactions of its flora and fauna, and its relationships with other communities.

Florida↗

USGS2005

Grass buffers for playas in agricultural landscapes: An annotated bibliography

This bibliography and associated literature synthesis (Melcher and Skagen, 2005) was developed for the Playa Lakes Joint Venture (PLJV). The PLJV sought compilation and annotation of the literature on grass buffers for protecting playas from runoff containing sediments, nutrients, pesticides, and other contaminants. In addition, PLJV sought information regarding the extent to which buffers may attenuate the precipitation runoff needed to fill playas, and avian use of buffers. We emphasize grass buffers, but we also provide information on other buffer types. There are a number of relatively synonymous terms that describe grass buffers for wetlands. They include: buffer strip, vegetated filter strip (VFS), grass buffer, grass filter, grass hedge, and grassed waterway (GW), among others (see McKague and others, 1996). Although some of these terms represent slightly different designs, placements, and/or purposes, they all perform similar functions. In this document, we use ‘buffer’ and VFS more or less interchangeably; other types are specified by name (e.g., grass hedges). Our bibliography is by no means exhaustive, as the body of literature potentially relevant to playas and wetland buffers is vast. Thus, we attempted to include and annotate at least 1–3 papers by numerous researchers heavily involved in buffer research and modeling. We also included single papers by other researchers to increase the spectrum of regional focus, watershed/wetland conditions, research approaches, researcher expertise, and the time over which buffer theories/practices have evolved. We found virtually no literature specific to buffers for playas (confirmed by D.A. Haukos, oral. commun., 2005); thus, we conducted interviews with playa scientists to glean information on possible buffer design and management specifically for playas. We did, however, find a significant body of literature on the results of controlled experiments designed to test buffer effectiveness, an important first step towards validating buffer effectiveness in real-world situations. Of the literature on playa ecology, flora, and wildlife, we found that most focuses on playa basins and wetlands rather than the surrounding uplands and grasslands; furthermore, most of the empirical work on playa ecology has taken place in the Southern High Plains (SHP; i.e., Texas and Oklahoma panhandles, southeastern Colorado, and southwestern Kansas) because many wetlands in other portions of the PLJV region (Fig. 1) were only recently recognized as playas. Finally, we found few papers on avian use of buffers; therefore, we focused on those that report on avian use of Conservation Reserve Program (CRP) fields or lands enrolled in similar programs. References on best management practices (BMPs) for agricultural lands were included because certain BMPs are crucial for informing decisions about buffer design/ effectiveness and overall playa ecology. We also included various papers that increase the spectrum of time over which buffer theories and practices have evolved. An unannotated section lists references that we did not prioritize for annotation and references that may be helpful but were beyond the scope of this document. Finally, we provide notes on conversations we had with scientists, land managers, and other buffer experts whom we consulted, and their contact information. We conclude the bibliography with appendices of common and scientific names of birds and plants and acronyms used in both the bibliography. In the annotations, italicized text signifies our own editorial remarks. Readers should also note that much of the work on buffers has been designed using English units of measure rather than metrics; in most cases, their results have been converted to metrics for publication, explaining the seemingly odd or irregular buffer widths and other parameters reported.

Open-File Report↗