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USGS2007

Map and data for Quaternary faults and fault systems on the Island of Hawai'i

Introduction This report and digitally prepared, GIS-based map is one of a series of similar products covering individual states or regions of United States that show the locations, ages, and activity rates of major earthquake-related features such as faults and fault-related folds. It is part of a continuing the effort to compile a comprehensive Quaternary fault and fold map and database for the United States, which is supported by the U.S. Geological Survey's (USGS) Earthquake Hazards Program. Guidelines for the compilation of the Quaternary fault and fold maps for the United States were published by Haller and others (1993) at the onset of this project. This compilation of Quaternary surface faulting and folding in Hawai`i is one of several similar state and regional compilations that were planned for the United States. Reports published to date include West Texas (Collins and others, 1996), New Mexico (Machette and others, 1998), Arizona (Pearthree, 1998), Colorado (Widmann and others, 1998), Montana (Stickney and others, 2000), Idaho (Haller and others, 2005), and Washington (Lidke and others, 2003). Reports for other states such as California and Alaska are still in preparation. The primary intention of this compilation is to aid in seismic-hazard evaluations. The report contains detailed information on the location and style of faulting, the time of most recent movement, and assigns each feature to a slip-rate category (as a proxy for fault activity). It also contains the name and affiliation of the compiler, date of compilation, geographic and other paleoseismologic parameters, as well as an extensive set of references for each feature. The map (plate 1) shows faults, volcanic rift zones, and lineaments that show evidence of Quaternary surface movement related to faulting, including data on the time of most recent movement, sense of movement, slip rate, and continuity of surface expression. This compilation is presented as a digitally prepared map product and catalog of data, both in Adobe Acrobat PDF format. The senior authors (Eric C. Cannon and Roland Burgmann) compiled the fault data as part of ongoing studies of active faulting on the Island of Hawai`i. The USGS is responsible for organizing and integrating the State or regional products under their National Seismic Hazard Mapping project, including the coordination and oversight of contributions from individuals and groups (Michael N. Machette and Anthony J. Crone), database design and management (Kathleen M. Haller), and digitization and analysis of map data (Richard L. Dart). After being released an Open-File Report, the data in this report will be available online at http://earthquake.usgs.gov/regional/qfaults/, the USGS Quaternary Fault and Fold Database of the United States.

Hawaii↗
USGS2007

Characterization of Petroleum Residue in the Entrada Sandstone, Colorado National Monument

Introduction As part of the U.S. Geological Survey's (USGS) petroleum resource assessment of the Uinta-Piceance Province, Colorado and Utah, in 2000 (USGS Uinta-Piceance Assessment Team, 2003), some 170 oils, oil stains, and oil seeps were geochemically characterized and divided into genetic types (Lillis and others, 2003). Recognized oil types include Minturn, Phosphoria, Grassy Trail Creek, Mancos, Mesaverde, and Green River. Subsequent to that study, the existence and general locality of petroleum residue in the Middle Jurassic Entrada Sandstone in Colorado National Monument (CNM) was brought to the attention of the authors (Scott and others, 2001). Because the analysis of such non-commercial petroleum deposits commonly yields valuable regional resource-trend information, we collected and characterized the reported CNM petroleum residue and compared the results with identified oil types in the Uinta-Piceance Province. Three samples of Entrada Sandstone with petroleum residue were collected near Little Park Road along the south edge of the CNM in sec.20, T.12S., R.101W. The approximate extent of the petroleum staining was determined by field testing with solvent, and the stains appear to be restricted to the upper part of the 'board beds' unit (informal name, Scott and others, 2001) of the Entrada Sandstone between the two fault traces of the Glade Park fault.

Open-File Report↗
USGS2007

Nowcasting Beach Advisories at Ohio Lake Erie Beaches

Data were collected during the recreational season of 2007 to test and refine predictive models at three Lake Erie beaches. In addition to E. coli concentrations, field personnel collected or compiled data for environmental and water-quality variables expected to affect E. coli concentrations including turbidity, wave height, water temperature, lake level, rainfall, and antecedent dry days and wet days. At Huntington (Bay Village) and Edgewater (Cleveland) during 2007, the models provided correct responses 82.7 and 82.1 percent of the time; these percentages were greater than percentages obtained using the previous day?s E. coli concentrations (current method). In contrast, at Villa Angela during 2007, the model provided correct responses only 61.3 percent of the days monitored. The data from 2007 were added to existing datasets and the larger datasets were split into two (Huntington) or three (Edgewater) segments by date based on the occurrence of false negatives and positives (named ?season 1, season 2, season 3?). Models were developed for dated segments and for combined datasets. At Huntington, the summed responses for separate best models for seasons 1 and 2 provided a greater percentage of correct responses (85.6 percent) than the one combined best model (83.1 percent). Similar results were found for Edgewater. Water resource managers will determine how to apply these models to the Internet-based ?nowcast? system for issuing water-quality advisories during 2008.

Open-File Report↗
USGS2008

Geochemical data for samples collected in 2007 near the concealed pebble porphyry Cu-Au-Mo deposit, southwest Alaska

In the summer of 2007, the U.S. Geological Survey (USGS) began an exploration geochemical research study over the Pebble porphyry copper-gold-molydenum (Cu-Au-Mo) deposit in southwest Alaska. The Pebble deposit is extremely large and is almost entirely concealed by tundra, glacial deposits, and post-Cretaceous volcanic and volcaniclastic rocks. The deposit is presently being explored by Northern Dynasty Minerals, Ltd., and Anglo-American LLC. The USGS undertakes unbiased, broad-scale mineral resource assessments of government lands to provide Congress and citizens with information on national mineral endowment. Research on known deposits is also done to refine and better constrain methods and deposit models for the mineral resource assessments. The Pebble deposit was chosen for this study because it is concealed by surficial cover rocks, it is relatively undisturbed (except for exploration company drill holes), it is a large mineral system, and it is fairly well constrained at depth by the drill hole geology and geochemistry. The goals of the USGS study are (1) to determine whether the concealed deposit can be detected with surface samples, (2) to better understand the processes of metal migration from the deposit to the surface, and (3) to test and develop methods for assessing mineral resources in similar concealed terrains. This report presents analytical results for geochemical samples collected in 2007 from the Pebble deposit and surrounding environs. The analytical data are presented digitally both as an integrated Microsoft 2003 Access? database and as Microsoft 2003 Excel? files. The Pebble deposit is located in southwestern Alaska on state lands about 30 km (18 mi) northwest of the village of Illiamna and 320 km (200 mi) southwest of Anchorage (fig. 1). Elevations in the Pebble area range from 287 m (940 ft) at Frying Pan Lake just south of the deposit to 1146 m (3760 ft) on Kaskanak Mountain about 5 km (5 mi) to the west. The deposit is in an area of relatively subdued topographic relief with an elevation of around 300 m (1000 ft). This portion of Alaska is part of the subarctic regime mountains division, Yukon intermontane plateaus-tayga-meadow province ecoregion, as defined by Bailey (U.S. Forest Service, 2007). Between June 28th and July 12th, 2007, scientists from the USGS collected soil, water, stream sediment, vegetation, heavy-mineral concentrate, till, and rock samples from the deposit area. This report contains analytical results for soil, water, stream sediment, and vegetation samples. Analyses for the heavy-mineral concentrate, till, and rock samples are still in progress. The sampling was undertaken during relatively dry and stable weather conditions. Only minor scattered rain showers occurred during the sampling period, so surface conditions were largely unaffected by weather. The predominant sample media collected were soils and surface waters. Soil and water (mostly from ponds and springs, some from small creeks) samples were collected along a single 7.8 km-long (4.8 mi) east-west traverse across the Pebble East and Pebble West zones and from more distal background areas around Koktuli and Kaskanak Mountains. Sample sites are shown on figure 2 and plate 1, and locality coordinates are provided in the accompanying Access and Excel files named FieldSite. Water samples were analyzed by USGS laboratories with one subset analyzed by Activation Laboratories (Actlabs), as indicated below. Soils and stream sediments were analyzed for their total content by SGS Minerals Services under a contract with the USGS. Soil samples were also leached by selected partial-extraction leaching procedures and then analyzed by several commercial laboratories, as described below. Vegetation samples were analyzed as indicated below.

Alaska↗
USGS2008

STRMDEPL08 - An extended version of STRMDEPL with additional analytical solutions to calculate streamflow depletion by nearby pumping wells

STRMDEPL, a one-dimensional model using two analytical solutions to calculate streamflow depletion by a nearby pumping well, was extended to account for two additional analytical solutions. The extended program is named STRMDEPL08. The original program incorporated solutions for a stream that fully penetrates the aquifer with and without streambed resistance to ground-water flow. The modified program includes solutions for a partially penetrating stream with streambed resistance and for a stream in an aquitard subjected to pumping from an underlying leaky aquifer. The code also was modified to allow the user to input pumping variations at other than 1-day intervals. The modified code is shown to correctly evaluate the analytical solutions and to provide correct results for half-day time intervals.

Open-File Report↗
USGS2008

Newly discovered Paleocene and Eocene rocks near Fairfield, California, and correlation with rocks in Vaca Valley and the so-called Martinez Formation or Stage

Discovery of a 3-foot thick sandstone bed with abundant Turritellid gastropods of late Paleocene age about 4 miles northeast of Fairfield and on the southwest flank of Cement Hill, Solano County provides an opportunity to reevaluate the relationships of lower Tertiary formations in this part of California. Cement Hill is named for travertine deposits in and on top of sandstone of Late Cretaceous age. In this report, the current study area where the Paleocene fossils were recently discovered is referred to as lower Cement Hill and is located in section 7 of the U.S. Geological Survey Fairfield North 7.5-minute quadrangle, Township 5 North, Range 1 West. Lower Cement Hill is about 23 miles north of the so-called Martinez 'formation' or stage area (Weaver and others, 1941) of late Paleocene age near Martinez. The Martinez 'formation' and stage have played a significant role in the development of early Tertiary stratigraphy in this part of California. The discovery of correlative rocks at Cement Hill was unsuspected and may be helpful in defining the extent of this so-called formation or stage. Coccolith identification and correlations are by David Bukry, foraminifer identifications and correlations by Alvin Almgren and Kristin McDougall, gastropod identification and correlation by LouElla Saul, and Radiolaria identifications and correlations are by Annika Sanfilippo.

California↗
USGS2008

Assessment of Appalachian Basin Oil and Gas Resources: Utica-Lower Paleozoic Total Petroleum System

The Utica-Lower Paleozoic Total Petroleum System (TPS) is an important TPS identified in the 2002 U.S. Geological Survey (USGS) assessment of undiscovered, technically recoverable oil and gas resources in the Appalachian basin province (Milici and others, 2003). The TPS is named for the Upper Ordovician Utica Shale, which is the primary source rock, and for multiple lower Paleozoic sandstone and carbonate units that are the important reservoirs. Upper Cambrian through Upper Silurian petroleum-bearing strata that constitute the Utica-Lower Paleozoic TPS thicken eastward from about 2,700 ft at the western margin of the Appalachian basin to about 12,000 ft at the thrust-faulted eastern margin of the Appalachian basin. The Utica-Lower Paleozoic TPS covers approximately 170,000 mi2 of the Appalachian basin from northeastern Tennessee to southeastern New York and from central Ohio to eastern West Virginia. The boundary of the TPS is defined by the following geologic features: (1) the northern boundary (from central Ontario to northeastern New York) extends along the outcrop limit of the Utica Shale-Trenton Limestone; (2) the northeastern boundary (from southeastern New York, through southeastern Pennsylvania-western Maryland-easternmost West Virginia, to northern Virginia) extends along the eastern limit of the Utica Shale-Trenton Limestone in the thrust-faulted eastern margin of the Appalachian basin; (3) the southeastern boundary (from west-central and southwestern Virginia to eastern Tennessee) extends along the eastern limit of the Trenton Limestone in the thrust-faulted eastern margin of the Appalachian basin; (4) the southwestern boundary (from eastern Tennessee, through eastern Kentucky, to southwestern Ohio) extends along the approximate facies change from the Trenton Limestone with thin black shale interbeds (on the east) to the equivalent Lexington Limestone without black shale interbeds (on the west); (5) the northern part of the boundary in southwestern Ohio to the Indiana border extends along an arbitrary boundary between the Utica Shale of the Appalachian basin and the Utica Shale of the Sebree trough (Kolata and others, 2001); and (6) the northwestern boundary (from east-central Indiana, through northwesternmost Ohio and southeasternmost Michigan, to central Ontario) extends along the approximate southeastern boundary of the Michigan Basin. Although the Utica-Lower Paleozoic TPS extends into northwestern Ohio, southeastern Michigan, and northeastern Indiana, these areas have been assigned to the Michigan Basin (Swezey and others, 2005) and are outside the scope of this report. Furthermore, although the northern part of the Utica-Lower Paleozoic TPS extends across the Great Lakes (Lake Erie and Lake Ontario) into southern Ontario, Canada, only the undiscovered oil and gas resources in the U.S. waters of the Great Lakes have been included in the USGS assessment of the Utica-Lower Paleozoic TPS. This TPS is similar to the Point Pleasant-Brassfield petroleum system previously identified by Drozd and Cole (1994) in the Ohio part of the Appalachian basin.

Open-File Report↗
USGS2008

Ground-water, surface-water, and water-chemistry data, Black Mesa area, northeastern Arizona— 2006-07

The N aquifer is the major source of water in the 5,400 square-mile Black Mesa area in northeastern Arizona. Availability of water is an important issue in northeastern Arizona because of continued water requirements for industrial and municipal use and the needs of a growing population. Precipitation in the Black Mesa area is typically about 6 to 14 inches per year. The water-monitoring program in the Black Mesa area began in 1971 and is designed to provide information about the long-term effects of ground-water withdrawals from the N aquifer for industrial and municipal uses. This report presents results of data collected for the monitoring program in the Black Mesa area from January 2006 to September 2007. The monitoring program includes measurements of (1) ground-water withdrawals, (2) ground-water levels, (3) spring discharge, (4) surface-water discharge, and (5) ground-water chemistry. Periodic testing of ground-water withdrawal meters is completed every 4 to 5 years. The Navajo Tribal Utility Authority (NTUA) yearly totals for the ground-water metered withdrawal data were unavailable in 2006 due to an up-grade within the NTUA computer network. Because NTUA data is often combined with Bureau of Indian Affairs data for the total withdrawals in a well system, withdrawals will not be published in this year's annual report. From 2006 to 2007, annually measured water levels in the Black Mesa area declined in 3 of 11 wells measured in the unconfined areas of the N aquifer, and the median change was 0.0 feet. Measurements indicated that water levels declined in 8 of 17 wells measured in the confined area of the aquifer. The median change for the confined area of the aquifer was 0.2 feet. From the prestress period (prior to 1965) to 2007, the median water-level change for 30 wells was -11.1 feet. Median water-level changes were 2.9 feet for 11 wells measured in the unconfined areas and -40.2 feet for 19 wells measured in the confined area. Spring flow was measured once in 2006 and once in 2007 at Moenkopi School Spring. Flow decreased by 18.9 percent at Moenkopi School Spring. During the period of record, flow fluctuated, and a decreasing trend was apparent. Continuous records of surface-water discharge in the Black Mesa area have been collected from streamflow gages at the following sites: Moenkopi Wash at Moenkopi (1976 to 2006), Dinnebito Wash near Sand Springs (1993 to 2006), Polacca Wash near Second Mesa (1994 to 2006), and Pasture Canyon Springs (August 2004 to December 2006). Median flows during November, December, January, and February of each water year were used as an index of the amount of ground-water discharge to the above named sites. For the period of record at each streamflow-gaging station, the median winter flows have generally remained even, showing neither a significant increase nor decrease in flows. There is not a long enough period of record for Pasture Canyon Spring for a trend to be apparent. In 2007, water samples were collected from 1 well and 1 spring in the Black Mesa area and were analyzed for selected chemical constituents. Concentrations of dissolved solids, chloride, and sulfate have varied at Peabody well 5 for the period of record, and there is an apparent increasing trend. Dissolved-solids, chloride, and sulfate concentrations increased at Moenkopi School Spring during the more than 12 years of record.

Arizona↗
USGS2009

Map Showing Geology and Hydrostratigraphy of the Edwards Aquifer Catchment Area, Northern Bexar County, South-Central Texas

Rock units forming the Edwards and Trinity aquifers in northern Bexar County, Texas, are exposed within all or parts of seven 7.5-minute quadrangles: Bulverde, Camp Bullis, Castle Hills, Helotes, Jack Mountain, San Geronimo, and Van Raub. The Edwards aquifer is the most prolific ground-water source in Bexar County, whereas the Trinity aquifer supplies water for residential, commercial, and industrial uses for areas north of the San Antonio. The geologic map of northern Bexar County shows the distribution of informal hydrostratigraphic members of the Edwards Group and the underlying upper member of the Glen Rose Limestone. Exposures of the Glen Rose Limestone, which forms the Trinity aquifer alone, cover approximately 467 km2 in the county. This study also describes and names five informal hydrostratigraphic members that constitute the upper member of the Glen Rose Limestone; these include, in descending order, the Caverness, Camp Bullis, Upper evaporite, Fossiliferous, and Lower evaporite members. This study improves our understanding of the hydrogeologic connection between the two aquifers as it describes the geology that controls the infiltration of surface water and subsurface flow of ground water from the catchment area (outcropping Trinity aquifer rocks) to the Edwards water-bearing exposures.

Open-File Report↗
USGS2009

Groundwater, surface–water, and water-chemistry data, Black Mesa area, northeastern Arizona—2007-2008

The N aquifer is an extensive aquifer and the primary source of groundwater in the 5,400-square-mile Black Mesa area in northeastern Arizona. Availability of water is an important issue in northeastern Arizona because of continued water requirements for industrial and municipal use by a growing population and because of low precipitation in the arid climate of the Black Mesa area, which is typically about 6 to 14 inches per year. The U.S. Geological Survey water-monitoring program in the Black Mesa area began in 1971 and provides information about the long-term effects of groundwater withdrawals from the N aquifer for industrial and municipal uses. This report presents results of data collected as part of the monitoring program in the Black Mesa area from January 2007 to September 2008. The monitoring program includes measurements of (1) groundwater withdrawals, (2) groundwater levels, (3) spring discharge, (4) surface-water discharge, and (5) groundwater chemistry. In 2007, total groundwater withdrawals were 4,270 acre-feet, industrial withdrawals were 1,170 acre-ft, and municipal withdrawals were 3,100 acre-ft. Total withdrawals during 2007 were about 41 percent less than total withdrawals in 2005. From 2006 to 2007, however, total withdrawals increased by 4 percent, industrial withdrawals decreased by approximately 2 percent, and total municipal withdrawals increased by 7 percent. From 2007 to 2008, annually measured water levels in the Black Mesa area declined in 6 of 11 wells measured in the unconfined areas of the N aquifer, and the median change was -0.2 feet. Water levels declined in 9 of 18 wells measured in the confined area of the aquifer. The median change for the confined area of the aquifer was -0.2 feet. From the prestress period (prior to 1965) to 2008, the median water-level change for 33 wells in both the confined and unconfined area was -12.9 feet. Median water-level changes were -1.0 feet for 15 wells measured in the unconfined areas and -33.2 feet for 18 wells measured in the confined area. Spring flow was measured at two springs in 2008. Flow decreased at both Moenkopi School Spring and Pasture Canyon Spring from previous years. Flow fluctuated during the period of record, but a decreasing trend was apparent. Continuous records of surface-water discharge in the Black Mesa area were collected from streamflow-gaging stations at the following sites: Moenkopi Wash at Moenkopi 09401260 (1976 to 2007), Dinnebito Wash near Sand Springs 09401110 (1993 to 2007), Polacca Wash near Second Mesa 09400568 (1994 to 2007), and Pasture Canyon Springs 09401265 (August 2004 to 2007). Median winter flows (November through February) of each water year were used as an index of the amount of groundwater discharge at the above-named sites. For the period of record of each streamflow-gaging station, the median winter flows have generally remained constant, which suggests no change in groundwater. The period of record is too short to determine if there is a trend at Pasture Canyon Spring. In 2008, water samples collected from 6 wells and 2 springs in the Black Mesa area were analyzed for selected chemical constituents and the results compared with previous analyses. Concentrations of dissolved solids, chloride, and sulfate have varied at all 6 wells for the period of record, but neither increasing nor decreasing trends over time were found. Dissolved-solids, chloride, and sulfate concentrations increased at Moenkopi School Spring during the more than 12 years of record at that site. Concentrations of dissolved solids, chloride, and sulfate at Pasture Canyon Spring have not varied much since the early 1980s, and there is no trend in those data.

Arizona↗
USGS2009

Reconstructing Rodinia by Fitting Neoproterozoic Continental Margins

Reconstructions of Phanerozoic tectonic plates can be closely constrained by lithologic correlations across conjugate margins by paleontologic information, by correlation of orogenic belts, by paleomagnetic location of continents, and by ocean floor magmatic stripes. In contrast, Proterozoic reconstructions are hindered by the lack of some of these tools or the lack of their precision. To overcome some of these difficulties, this report focuses on a different method of reconstruction, namely the use of the shape of continents to assemble the supercontinent of Rodinia, much like a jigsaw puzzle. Compared to the vast amount of information available for Phanerozoic systems, such a limited approach for Proterozoic rocks, may seem suspect. However, using the assembly of the southern continents (South America, Africa, India, Arabia, Antarctica, and Australia) as an example, a very tight fit of the continents is apparent and illustrates the power of the jigsaw puzzle method. This report focuses on Neoproterozoic rocks, which are shown on two new detailed geologic maps that constitute the backbone of the study. The report also describes the Neoproterozoic, but younger or older rocks are not discussed or not discussed in detail. The Neoproterozoic continents and continental margins are identified based on the distribution of continental-margin sedimentary and magmatic rocks that define the break-up margins of Rodinia. These Neoproterozoic continental exposures, as well as critical Neo- and Meso-Neoproterozoic tectonic features shown on the two new map compilations, are used to reconstruct the Mesoproterozoic supercontinent of Rodinia. This approach differs from the common approach of using fold belts to define structural features deemed important in the Rodinian reconstruction. Fold belts are difficult to date, and many are significantly younger than the time frame considered here (1,200 to 850 Ma). Identifying Neoproterozoic continental margins, which are primarily extensional in origin, supports recognition of the Neoproterozoic fragmentation pattern of Rodinia and outlines the major continental masses that, prior to the breakup, formed the supercontinent. Using this pattern, Rodinia can be assembled by fitting the pieces together. Evidence for Neoproterozoic margins is fragmentary. The most apparent margins are marked by miogeoclinal deposits (passive-margin deposits). The margins can also be outlined by the distribution of continental-margin magmatic-arc rocks, by juvenile ocean-floor rocks, or by the presence of continent-ward extending aulacogens. Most of the continental margins described here are Neoproterozoic, and some had an older history suggesting that they were major, long-lived lithospheric flaws. In particular, the western margin of North America appears to have existed for at least 1,470 Ma and to have been reactivated many times in the Neoproterozoic and Phanerozoic. The inheritance of trends from the Mesoproterozoic by the Neoproterozoic is particularly evident along the eastern United States, where a similarity of Mesoproterozoic (Grenville) and Neoproterozoic trends, as well as Paleozoic or Mesozoic trends, is evident. The model of Rodinia presented here is based on both geologic and paleomagnetic information. Geologic evidence is based on the distribution and shape of Neoproterozoic continents and on assembling these continents so as to match the shape, history, and scale of adjoining margins. The proposed model places the Laurasian continents?Baltica, Greenland, and Laurentia?west of the South American continents (Amazonia, Rio de La Plata, and Sa? Francisco). This assembly is indicated by conjugate pairs of Grenville-age rocks on the east side of Laurentia and on the west side of South America. In the model, predominantly late Neoproterozoic magmatic-arc rocks follow the trend of the Grenville rocks. The boundary between South America and Africa is interpreted as the site of a Wilson cycle

Open-File Report↗
USGS2009

Multilevel Methodology for Simulation of Spatio-Temporal Systems with Heterogeneous Activity; Application to Spread of Valley Fever Fungus

This report consists of a dissertation submitted to the faculty of the Department of Electrical and Computer Engineering, in partial fulfillment of the requirements for the degree of Doctor of Philosophy, Graduate College, The University of Arizona, 2008. Spatio-temporal systems with heterogeneity in their structure and behavior have two major problems associated with them. The first one is that such complex real world systems extend over very large spatial and temporal domains and consume so many computational resources to simulate that they are infeasible to study with current computational platforms. The second one is that the data available for understanding such systems is limited because they are spread over space and time making it hard to obtain micro and macro measurements. This also makes it difficult to get the data for validation of their constituent processes while simultaneously considering their global behavior. For example, the valley fever fungus considered in this dissertation is spread over a large spatial grid in the arid Southwest and typically needs to be simulated over several decades of time to obtain useful information. It is also hard to get the temperature and moisture data (which are two critical factors on which the survival of the valley fever fungus depends) at every grid point of the spatial domain over the region of study. In order to address the first problem, we develop a method based on the discrete event system specification which exploits the heterogeneity in the activity of the spatio-temporal system and which has been shown to be effective in solving relatively simple partial differential equation systems. The benefit of addressing the first problem is that it now makes it feasible to address the second problem. We address the second problem by making use of a multilevel methodology based on modeling and simulation and systems theory. This methodology helps us in the construction of models with different resolutions (base and lumped models). This allows us to refine an initially constructed lumped model with detailed physics-based process models and assess whether they improve on the original lumped models. For that assessment, we use the concept of experimental frame to delimit where the improvement is needed. This allows us to work with the available data, improve the component models in their own experimental frame and then move them to the overall frame. In this dissertation, we develop a multilevel methodology and apply it to a valley fever model. Moreover, we study the model's behavior in a particular experimental frame of interest, namely the formation of new sporing sites.

Open-File Report↗
USGS2010

Temporal chemical data for sediment, water, and biological samples from the Lava Cap Mine Superfund site, Nevada County, California— 2006–2008

The Lava Cap Mine is located about 6 km east of the city of Grass Valley, Nevada County, California, at an elevation of about 900 m. Gold was hosted in quartz-carbonate veins typical of the Sierran Gold Belt, but the gold grain size was smaller and the abundance of sulfide minerals higher than in typical deposits. The vein system was discovered in 1860, but production was sporadic until the 1930s when two smaller operations on the site were consolidated, a flotation mill was built, and a 100-foot deep adit was driven to facilitate drainage and removal of water from the mine workings, which extended to 366 m. Peak production at the Lava Cap occurred between 1934 and 1943, when about 90,000 tons of ore per year were processed. To facilitate removal of the gold and accessory sulfide minerals, the ore was crushed to a very fine sand or silt grain size for processing. Mining operations at Lava Cap ceased in June 1943 due to War Production Board Order L-208 and did not resume after the end of World War II. Two tailings retention structures were built at the Lava Cap Mine. The first was a log dam located about 0.4 km below the flotation mill on Little Clipper Creek, and the second, built in 1938, was a larger earth fill and rip-rap structure constructed about 2 km downstream, which formed the water body now called Lost Lake. The log dam failed during a storm that began on December 31, 1996, and continued into January 1997; an estimated 8,000-10,000 m 3 of tailings were released into Little Clipper Creek during this event. Most of the fine tailings were deposited in Lost Lake, dramatically increasing its turbidity and resulting in a temporary 1-1.5 m rise in lake level due to debris blocking the dam spillway. When the blockage was cleared, the lake level quickly lowered, leaving a "bathtub ring" of very fine tailings deposited substantially above the water line. The U.S. Environmental Protection Agency (EPA) initiated emergency action in late 1997 at the mine site to reduce the possibility of future movement of tailings, and began an assessment of the risks posed by physical and chemical hazards at the site. The EPA's assessment identified arsenic (As) as the primary hazard of concern. Three main exposure routes were identified: inhalation/ingestion of mine tailings, dermal absorption/ingestion of As in lake water from swimming, and ingestion of As-contaminated ground water or surface water. Lost Lake is a private lake which is completely surrounded by low-density residential development. Prior to the dam failure, the lake was used by the local residents for swimming and boating. An estimated 1,776 people reside within one mile of the lake, and almost all residents of the area use potable groundwater for domestic use. Risk factors for human exposure to As derived from mine wastes were high enough to merit placement of the mine site and surrounding area on the National Priority List (commonly called "Superfund"). The Lava Cap Mine Superfund site (LCMS) encompasses approximately 33 acres that include the mine site, the stretch of Little Clipper Creek between the mine and Lost Lake, the lake itself, and the area between the lake and the confluence of Little Clipper Creek with its parent stream, Clipper Creek. The area between the two creeks is named the "deposition area" due to the estimated 24 m thick layer of tailings that were laid down there during and after active mining. The lobate structure of Lost Lake is also due to deposition in this area. The deposition area and Lost Lake are together estimated to contain 382,277 m 3 of tailings. The primary goals of the EPA have been to minimize tailings movement downstream of Lost Lake and to ensure that residents in the area have drinking water that meets national water quality standards. EPA has officially decided to construct a public water supply line to deliver safe water to affected residences, since some residential wells in the area have As concentrations above the current drinking water standard (10 ppb). However, some deeper monitoring wells in the deposition area have As concentrations that are as much as 100 times the As drinking water standard (EPA, 2001). Fracture-dominated groundwater flowpaths complicate measurement of the rate and direction of groundwater flow in the area. Investigations of groundwater movement at the LCMS are planned by the EPA, but have not been undertaken at the time of this writing.

California↗
USGS2009

Benthic flux of nutrients and trace metals in the northern component of San Francisco Bay, California

Two sets of sampling trips were coordinated in late summer 2008 (weeks of July 8 and August 6) to sample the interstitial and overlying bottom waters at 10 shallow locations (9 sites <3 meters in depth) within the northern component of the San Francisco Bay/Delta (herein referred to as North Bay). The work was performed to better understand sources of biologically reactive solutes (namely, dissolved macronutrients and trace metals) that may affect the base of the food web in this part of the estuary. A nonmetallic pore-water profiler was used to obtain the first centimeter-scale estimates of the vertical solute-concentration gradients for diffusive-flux determinations. This study, performed in collaboration with scientists from San Francisco State University?s Romberg Tiburon Center for Environmental Studies, provides information to assist in developing and refining management strategies for the Bay/Delta system and supports efforts to monitor changes in food-web structure associated with regional habitat modifications directed by the California Bay-Delta Authority. On July 7, 2008, and August 5, 2008, pore-water profilers were successfully deployed at six North Bay sites per trip to measure the concentration gradient of dissolved macronutrients and trace metals near the sediment-water interface. Only two of the sites (433 and SSB009 within Honker Bay) were sampled in both series of profiler deployments. At each sampling site, profilers were deployed in triplicate, while discrete samples and dataloggers were used to collect ancillary data from both the water column and benthos to help interpret diffusive-flux measurements. Benthic flux of dissolved (0.2-micron filtered) inorganic phosphate (that is, soluble reactive phosphorus (SRP)) ranged from negligible levels (-0.003?0.005 millimole per square meter per day (mmole m-2d-1) at Site 4.1 outside Honker Bay) to 0.060?0.006 mmole m-2d-1 near the northern coast of Brown?s Island. Except for the elevated flux at Browns Island, the benthic flux of soluble reactive phosphorus (SRP) was consistently: (1) lower than previously reported for South Bay sites, (2) an order of magnitude lower than oligotrophic Coeur d?Alene Lake, (3) two orders of magnitude lower than determined for eutrophic Upper Klamath Lake, and (4) an order of magnitude or more lower than the estimated summer riverine inputs for SRP (900 to 1,300 kilograms of phosphorous per day (kg-P d-1)). In contrast to fluxes reported for the South Bay, nitrate fluxes were consistently negative (that is, drawn from the water column into the sediment), except for one site with statistically insignificant nitrate fluxes (Site 409 within Suisun Bay). The most negative nitrate flux (-7.3?0.1 mmole m-2d-1) was observed within Grizzly Bay (Site 416). Observed nitrate fluxes bracketed the estimated summer fluvial flux of nitrate (3,500 to 5,000 kg-N d-1). With the exception of the two Grizzly Bay sites (416 and 417), the consistently positive benthic flux of ammonia generally counteracted the negative flux of nitrate to yield a net balance of dissolved inorganic nitrogen. Ammonia benthic fluxes extrapolated for Suisun Bay ranged from 320 kg-N d-1 (Site SSB009 near the entrance to Honker Bay) to 1,900 kg-N d-1 (Montezuma Island). These values represent a significant ammonia source to the water column relative to summer riverine inputs (approximately 400 to 600 kg-N d-1). Dissolved silica also displayed a consistently positive benthic flux, except for Site 409 within Suisun Bay, which showed insignificant fluxes (also insignificant for nitrate and SRP). As with the nitrate fluxes, Grizzly Bay and Browns Island sites yielded the highest dissolved silica fluxes (1.3?1.2 to 2.5?0.6 mmole m-2d-1, respectively). These initial diffusive-flux estimates are greater than those measured in the South Bay using core-incubation experiments, which include bioturbation and bioirrigation effects, but they are nevertheless probably one to t

Open-File Report↗
USGS2010

Groundwater, surface-water, and water-chemistry data, Black Mesa area, northeastern Arizona— 2008–2009

The N aquifer is an extensive aquifer and the primary source of groundwater in the 5,400-square-mile Black Mesa area in northeastern Arizona. Availability of water is an important issue in northeastern Arizona because of continued water requirements for industrial and municipal use by a growing population and because of low precipitation in the arid climate of the Black Mesa area, which is typically about 6 to 14 inches per year. The U.S. Geological Survey water-monitoring program in the Black Mesa area began in 1971 and provides information about the long-term effects of groundwater withdrawals from the N aquifer for industrial and municipal uses. This report presents results of data collected as part of the monitoring program in the Black Mesa area from January 2008 to September 2009. The monitoring program includes measurements of (1) groundwater withdrawals, (2) groundwater levels, (3) spring discharge, (4) surface-water discharge, and (5) groundwater chemistry. In 2008, total groundwater withdrawals were 4,110 acre-feet, industrial withdrawals were 1,210 acre-ft, and municipal withdrawals were 2,900 acre-ft. Total withdrawals during 2008 were about 44 percent less than total withdrawals in 2005. From 2007 to 2008 total withdrawals decreased by 4 percent, industrial withdrawals increased by approximately 3 percent, but total municipal withdrawals decreased by 6 percent. From 2008 to 2009, annually measured water levels in the Black Mesa area declined in 8 of 15 wells that were available for comparison in the unconfined areas of the N aquifer, and the median change was -0.1 feet. Water levels declined in 11 of 18 wells measured in the confined area of the aquifer. The median change for the confined area of the aquifer was -0.2 feet. From the prestress period (prior to 1965) to 2009, the median water-level change for 34 wells in both the confined and unconfined area was -11.8 feet. Also, from the prestress period to 2009, the median water-level changes were -1.6 feet for 16 wells measured in the unconfined areas and -36.7 feet for 18 wells measured in the confined area. Spring flow was measured at three springs in 2009. Flow fluctuated during the period of record, but a decreasing trend was apparent at Moenkopi School Spring and Pasture Canyon Spring. Discharge at Burro spring has remained constant since it was first measured in 1998. Continuous records of surface-water discharge in the Black Mesa area were collected from streamflow-gaging stations at the following sites: Moenkopi Wash at Moenkopi 09401260 (1976 to 2008), Dinnebito Wash near Sand Springs 09401110 (1993 to 2008), Polacca Wash near Second Mesa 09400568 (1994 to 2008), and Pasture Canyon Springs 09401265 (August 2004 to 2008). Median winter flows (November through February) of each water year were used as an index of the amount of groundwater discharge at the above-named sites. For the period of record of each streamflow-gaging station, the median winter flows have generally remained constant, which suggests no change in groundwater discharge. In 2009, water samples collected from 6 wells and 3 springs in the Black Mesa area were analyzed for selected chemical constituents, and the results were compared with previous analyses. Concentrations of dissolved solids, chloride, and sulfate have varied at all 6 wells for the period of record, but neither increasing nor decreasing trends over time were found. Dissolved-solids, chloride, and sulfate concentrations increased at Moenkopi School Spring during the more than 12 years of record at that site. Concentrations of dissolved solids, chloride, and sulfate at Pasture Canyon Spring have not varied much since the early 1980s, and there is no trend in those data. Concentrations of dissolved solids, chloride, and sulfate at Burro Spring have varied for the period of record, but there is no trend in the data.

Arizona↗
USGS2010

Buddingtonite in Menlo Park, California

The mineral buddingtonite, named after A.F. Buddington, long-time professor of petrology at Princeton University, was first identified at the Sulfur Bank mine in Lake County, California (Erd and others, 1964). The ammonium feldspar was recognized in Menlo Park, California, in 1964 by the author, with Erd's help, shortly before publication of the original description of the new mineral. Subsequently, buddingtonite has been widely recognized in hydrothermal mineral deposits and has been used in remote-sensing applications by the mineral industry. Buddingtonite also has been identified in the Phosphoria Formation and in oil shales of the Green River Formation. This paper briefly describes the geologic setting and mineralogy of the occurrences of buddingtonite and other ammonium-bearing minerals in the vicinity of Menlo Park.

Open-File Report↗
USGS2010

Chemical analyses in the World Coal Quality Inventory

The main objective of the World Coal Quality Inventory (WoCQI) was to collect and analyze a global set of samples of mined coal during a time period from about 1995 to 2006 (Finkelman and Lovern, 2001). Coal samples were collected by foreign collaborators and submitted to country specialists in the U.S. Geological Survey (USGS) Energy Program. However, samples from certain countries, such as Afghanistan, India, and Kyrgyzstan, were collected collaboratively in the field with USGS personnel. Samples were subsequently analyzed at two laboratories: the USGS Inorganic Geochemistry Laboratory located in Denver, CO and a commercial laboratory (Geochemical Testing, Inc.) located in Somerset, PA. Thus the dataset, which is in Excel (2003) format and includes 1,580 samples from 57 countries, does not have the inter-laboratory variability that is present in many compilations. Major-, minor-, and trace-element analyses from the USGS laboratory, calculated to a consistent analytical basis (dry, whole-coal) and presented with available sample identification information, are sorted alphabetically by country name. About 70 percent of the samples also have data from the commercial laboratory, which are presented on an as-received analytical basis. The USGS initiated a laboratory review of quality assurance in 2008, covering quality control and methodology used in inorganic chemical analyses of coal, coal power plant ash, water, and sediment samples. This quality control review found that data generated by the USGS Inorganic Geochemistry Laboratory from 1996 through 2006 were characterized by quality practices that did not meet USGS requirements commonly in use at the time. The most serious shortcomings were (1) the adjustment of raw sample data to standards when the instrument values for those standards exceeded acceptable limits or (2) the insufficient use of multiple standards to provide adequate quality assurance. In general, adjustment of raw data to account for instrument 'drift' is an acceptable practice within strictly defined limits. During the denoted period, USGS required that the maximum adjustment of instrument values, guided by calibration standards, was not allowed to exceed 10 percent. However, in some cases, the Inorganic Geochemistry Laboratory released data that were adjusted by more than 10 percent and (or) were not constrained by an adequate number of control standards. Original instrument values no longer exist for about 80 percent of the analyses during this period; therefore, the acceptability of drift corrections for most of the samples analyzed cannot be determined. For these reasons, the WoCQI data from the USGS Inorganic Geochemistry Laboratory should be used with care. For more information, individuals may contact laboratory management at EnergyLabs@usgs.gov with specific questions about particular datasets or analytical attributes. Standard USGS sampling methods were provided and recommended to collaborators, but the analyzed samples may or may not be representative of their locale; for some samples, only limited information is available concerning sample provenance. Single samples cannot represent spatial or temporal variability within a coal area. Geochemical datasets of U.S. coals can be found in the COALQUAL database (Bragg and others, 1997) and the National Coal Quality Inventory (Hatch and others, 2006), as only non-U.S. sample data are presented in the WoCQI. Although the WoCQI does not contain worldwide coverage of coal deposits, it is truly a unique and valuable compilation. The information in the WoCQI should prove useful for identifying possible areas for future global coal research.

Open-File Report↗
USGS2010

Geologic cross section, gas desorption, and other data from four wells drilled for Alaska rural energy project, Wainwright, Alaska, coalbed methane project, 2007-2009

Energy costs in rural Alaskan communities are substantial. Diesel fuel, which must be delivered by barge or plane, is used for local power generation in most off-grid communities. In addition to high costs incurred for the purchase and transport of the fuel, the transport, transfer, and storage of fuel products pose significant difficulties in logistically challenging and environmentally sensitive areas. The Alaska Rural Energy Project (AREP) is a collaborative effort between the United States Geological Survey (USGS) and the Bureau of Land Management Alaska State Office along with State, local, and private partners. The project is designed to identify and evaluate shallow (<3,000 ft) subsurface resources such as coalbed methane (CBM) and geothermal in the vicinity of rural Alaskan communities where these resources have the potential to serve as local-use power alternatives. The AREP, in cooperation with the North Slope Borough, the Arctic Slope Regional Corporation, and the Olgoonik Corporation, drilled and tested a 1,613 ft continuous core hole in Wainwright, Alaska, during the summer of 2007 to determine whether CBM represents a viable source of energy for the community. Although numerous gas-bearing coal beds were encountered, most are contained within the zone of permafrost that underlies the area to a depth of approximately 1,000 ft. Because the effective permeability of permafrost is near zero, the chances of producing gas from these beds are highly unlikely. A 7.5-ft-thick gas-bearing coal bed, informally named the Wainwright coal bed, was encountered in the sub-permafrost at a depth of 1,242 ft. Additional drilling and testing conducted during the summers of 2008 and 2009 indicated that the coal bed extended throughout the area outlined by the drill holes, which presently is limited to the access provided by the existing road system. These tests also confirmed the gas content of the coal reservoir within this area. If producible, the Wainwright coal bed contains sufficient gas to serve as a long-term source of energy for the community.

Open-File Report↗