USGS Science⌕ Search

SEARCH · USGS Science

Results for “Ecology”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 1,387 records · Page 77Linked to original sources

Habitat use and feeding ecology of riverine juvenile American shad

We examined premigratory populations of American shad Alosa sapidissima in the upper Delaware River to determine habitat and microhabitat use, differential prey use among habitat types, and habitat suitability indices for this previously unmodeled life stage. Both seining and diving techniques were used to quantify juveniles in six habitat types with six physical habitat covariables. Plankton and drift samples also were compared with stomach contents within habitats. We found no relation between relative abundance of juveniles and habitat type, which suggests general use of most riverine habitats. Physical habitat variables likewise did not affect use of habitat within ranges recorded, with two exceptions: (1) a positive relationship between abundance and water temperature in riffles and (2) a positive relationship between abundance and percent submerged aquatic vegetation (SAV) cover in SAV habitats. Opportunistic use of prey items was apparent; however, juveniles selected chironomid larvae and pupae and adult terrestrial insects and avoided ephemeropterans. Overlap between diets and available prey was high for most habitat types ( C λ mean = 0.71), especially for riffles ( C λ = 0.91). However, overlap for juveniles foraging at tributary mouths, where they strongly selected adult terrestrial insects, was low ( C λ = 0.49).

Pennsylvania↗

Population characteristics and ecological role of northern pike in shallow natural lakes in Nebraska

Northern pike Esox lucius were sampled in Nebraska's Sandhill lakes during 1998 and 1999 to determine population characteristics and their influence on the fish community in these shallow, warm lakes at the southwestern edge of this species' natural range. Density-dependent growth, size structure, and condition were not evident in the northern pike populations sampled. Relative abundance of largemouth bass Micropterus salmoides was positively related to size structure of yellow perch Perca flavescens and bluegills Lepomis macrochirus when northen pike were absent. When northern pike and largemouth bass populations were sympatric, these relationships were less evident. Population size structure of yellow perch was lower in lakes with northern pike, but decreased size structure was not evident for bluegills. Northern pike growth decreased with July bottom water temperature, which ranged from 20??C to 25??C. Recruitment patterns of northern pike in the Sandhill lakes appeared to be lake-specific, strong and weak year-classes occurring in the same year among different populations. Northern pike in these shallow, warm lakes act as a top-down predator and appear to structure fish communities predominated by largemouth bass and panfish. Biologists managing warmwater Midwestern lakes thus should consider the effect of northern pike on fish communities.

North American Journal of Fisheries Management↗

Waterfowl ecology and avian influenza in california: Do host traits inform us about viral occurrence?

We examined whether host traits influenced the occurrence of avian influenza virus (AIV) in Anatidae (ducks, geese, swans) at wintering sites in California's Central Valley. In total, 3487 individuals were sampled at Sacramento National Wildlife Refuge and Conaway Ranch Duck Club during the hunting season of 2007-08. Of the 19 Anatidae species sampled, prevalence was highest in the northern shoveler (5.09%), followed by the ring-necked duck (2.63%), American wigeon (2.57%), bufflehead (2.50%), greater white-fronted goose (2.44%), and cinnamon teal (1.72%). Among host traits, density of lamellae (filtering plates) of dabbling ducks was significantly associated with AIV prevalence and the number of subtypes shed by the host, suggesting that feeding methods may influence exposure to viral particles. ?? 2010 American Association of Avian Pathologists.

Avian Diseases↗

Ecology and conservation of a rare, old-growth-associated canopy lichen in a silvicultural landscape

Nephroma occultum Wetm. is a rare, epiphytic lichen associated with old-growth forests of northwestern North America. We describe its distribution, abundance, and habitat within the managed landscape of a southwestern Oregon watershed. Because this species is found mainly in the canopy, we used direct canopy access (tree climbing) in combination with ground (litter) searches for our surveys. We recommend this dual approach when confident determination of presence or absence of a canopy species is needed. Our surveys confirm that N. occultum is a rare old-growth associate within the area of this study, the southernmost extension of its known range. It was both rare across the landscape and uncommon in our primary study site, a 500 yr old stand. It was most often found growing close to the trunk on branches of large Pseudotsuga menziesii , but its distribution was sporadic even within an old-growth stand. The scarcity of very old stands, in combination with the limited ability of this species to disperse within and between stands, has likely contributed to its rarity within the watershed. Management for N. occultum should focus on populations and habitat needs rather than on individuals. Our calculations show that cutting with retention of individual trees surrounded by small buffers could result in the eventual loss of N. occultum from the study area.

Oregon↗

Ecological effects of nitrogen deposition in the western United States

In the western United States vast acreages of land are exposed to low levels of atmospheric nitrogen (N) deposition, with interspersed hotspots of elevated N deposition downwind of large, expanding metropolitan centers or large agricultural operations. Biological response studies in western North America demonstrate that some aquatic and terrestrial plant and microbial communities are significantly altered by N deposition. Greater plant productivity is counterbalanced by biotic community changes and deleterious effects on sensitive organisms (lichens and phytoplankton) that respond to low inputs of N (3 to 8 kilograms N per hectare per year). Streamwater nitrate concentrations are elevated in high-elevation catchments in Colorado and are unusually high in southern California and in some chaparral catchments in the southwestern Sierra Nevada. Chronic N deposition in the West is implicated in increased fire frequency in some areas and habitat alteration for threatened species. Between hotspots, N deposition is too low to cause noticeable effects or has not been studied.

BioScience↗

Ecological effects of ranching: A six-point critique

Ranching is the dominant land use in much of the American West. Although a copious literature has examined the effects of various grazing practices on native ecosystems, we present here the idea that ranching has important impacts on the land independent of those caused by grazing itself. If biological conservation is to be successful on the western grasslands and shrublands, ranchers must be central to any plan. Focusing on the Great Plains of the United States, and on Wyoming in particular, we raise six points of concern that must be addressed before we can hope to restore or maintain native ecosystems on the range.

BioScience↗

Demography and ecology of mangrove diamondback terrapins in a wilderness area of Everglades National Park, Florida, USA

Diamondback Terrapins (Malaclemys terrapin) are distributed in brackish water habitats along the U.S. east coast from Massachusetts to Texas, but many populations may be in decline. Whereas ample morphological, behavioral, and reproductive information has been collected for terrapins living in temperate salt marsh habitats, comparatively little is known about mangrove terrapins. To understand population structure of mangrove M. terrapin living in a wilderness area, we conducted a capture-recapture study in the remote, protected Big Sable Creek complex of Everglades National Park, Florida. The goals of the study were to collect baseline demographic data and to compare population structure and growth rates of mangrove terrapins with what is known for more well studied salt marsh terrapins in locations that experience human-imposed threats. We marked 300 terrapins; the sex ratio was 1 female:1.2 males. Considerable sexual size dimorphism was apparent, with reproductively mature females three times larger (by mass) than mature males. Eighty percent of females and 94% of males were classified as mature, based on straight plastron length (SPL). For a subset of terrapins not yet at maximum size (n = 39), we measured growth as a change in straight carapace length over time of 0.3-26.4 mm/yr for females (n = 26) and 0.9-14.5 mm/yr for males (n = 13). Our study presents the first demographic data on mangrove M. terrapin in the coastal Everglades. ?? 2008 by the American Society of Ichthyologists and Herpetologists.

Copeia↗

Molecular ecology of the big brown bat (Eptesicus fuscus): Genetic and natural history variation in a hybrid zone

Several geographically distinct mitochondrial DNA (mtDNA) lineages of the big brown bat (Eptesicus fuscus) have been documented in North America. Individuals from 2 of these lineages, an eastern and a western form, co-occur within maternity colonies in Colorado. The discovery of 2 divergent mtDNA lineages in sympatry prompted a set of questions regarding possible biological differences between haplotypes. We captured big brown bats at maternity roosts in Colorado and recorded data on body size, pelage color, litter size, roosting and overwintering behaviors, and local distributions. Wing biopsies were collected for genetic analysis. The ND2 region of the mtDNA molecule was used to determine lineage of the bats. In addition, nuclear DNA (nDNA) intron 1 of the ??-globin gene was used to determine if mtDNA lineages are hybridizing. Eastern and western mtDNA lineages differed by 10.3% sequence divergence and examination of genetic data suggests recent population expansion for both lineages. Differences in distribution occur along the Colorado Front Range, with an increasing proportion of western haplotypes farther south. Results from nDNA analyses demonstrated hybridization between the 2 lineages. Additionally, no outstanding distinctiveness was found between the mtDNA lineages in natural history characters examined. We speculate that historical climate changes separated this species into isolated eastern and western populations, and that secondary contact with subsequent interbreeding was facilitated by European settlement. ?? 2007 American Society of Mammalogists.

Journal of Mammalogy↗

Conflicting research on the demography, ecology, and social behavior of Gunnison's prairie dogs ( Cynomys gunnisoni )

Gunnison's prairie dogs ( Cynomys gunnisoni ) are rare, diurnal, colonial, burrowing, ground-dwelling squirrels. Studies of marked individuals living under natural conditions in the 1970s, 1980s, and 1990s showed that males are heavier than females throughout the year; that adult females living in the same territory are consistently close kin; and that females usually mate with the sexually mature male(s) living in the home territory. Research from 2007 through 2010 challenges all 3 of these findings. Here we discuss how different methods might have led to the discrepancies.

Journal of Mammalogy↗

Ecology of the brain trematode Euhaplorchis californiensis and its host, the California Killifish (Fundulus parvipinnis)

We describe the distribution and abundance of the brain-encysting trematode Euhaplorchis californiensis and its second intermediate host, the California killifish ( Fundulus parvipinnis ), in 3 estuaries in southern California and Baja California. We quantified the density of fish and metacercariae at 13–14 sites per estuary and dissected 375 killifish. Density (numbers and biomass) was examined at 3 spatial scales, i.e., small replicate sites, habitats, and entire estuaries. At those same scales, factors that might influence metacercaria prevalence, abundance, and aggregation in host individuals and populations were also examined. Metacercaria prevalence was 94–100% among the estuaries. Most fish were infected with 100s to 1,000s of E. californiensis metacercariae, with mean abundance generally increasing with host size. Although body condition of fish did not vary among sites or estuaries, the abundance of metacercariae varied significantly among sites, habitats, estuaries, and substantially with host size and gender. Metacercariae were modestly aggregated in killifish ( k > 1), with aggregation decreasing in larger hosts. Across the 3 estuaries, the total populations of killifish ranged from 9,000–12,000 individuals/ha and from 7–43 kg/ha. The component populations of E. californiensis metacercariae ranged from 78–200 million individuals/ha and from 0.1–0.3 kg/ha. Biomass of E. californiensis metacercariae constituted 0.5–1.7% of the killifish biomass in the estuaries. Our findings, in conjunction with previously documented effects of E. californiensis , suggest a strong influence of this parasite on the size, distribution, biomass, and abundance of its killifish host.

Journal of Parasitology↗

Reproductive ecology of American Oystercatchers nesting on shell rakes

Degradation of nesting habitat for coastal birds has led to the use of nontraditional nesting habitat. The American Oystercatcher ( Haematopus palliatus ) is listed as a "Species of High Concern'' by the U. S. Shorebird Conservation Plan and is declining in the southern portion of its U. S. breeding range, where ~ 50% of breeding oystercatchers nest on shell substrate instead of beachfront habitat. We measured daily survival rates during incubation and chick rearing in shell rake habitats over five breeding seasons in the Cape Romain region of South Carolina, USA. Of 354 nesting attempts monitored, 16.1% hatched at least one egg. During incubation, daily survival rate was 0.938, corresponding to 22.8% success to hatching (nest success). For broods, daily survival was 0.991, or 74.0% success from hatching to fledging. Productivity in the Cape Romain region is primarily being lost during the incubation phase, when nests are exposed to overwash and predation. Mobile chicks may, however, be able to avoid flood events or predators by relocating to higher or more protected portions of a shell rake. Based on comparative data for American Oystercatchers from elsewhere in their range, it does not appear that shell rakes in the Cape Romain region are inferior breeding habitat. Our data suggest that conservation actions targeting nest and chick loss from flooding and predation have the greatest opportunity to enhance reproductive success in this core breeding area, and that an assessment of the availability, structure, avian use, and protection status of shell rakes is warranted.

Condor↗

Water temperature and availability shape the spatial ecology of a hot springs endemic toad

Desert amphibians are limited to exploiting ephemeral resources and aestivating or to inhabiting scarce refuges of permanent water, such as springs. Understanding how amphibians use these resources is essential for their conservation. Dixie Valley Toads ( Anaxyrus williamsi ) are precinctive to a small system of cold and hot springs in the Dixie Valley, Nevada, USA. The toads have been petitioned for listing under the US Endangered Species Act, and information about how they use terrestrial and aquatic resources will help managers to conserve the toads and identify threats like geothermal energy development that might affect these toads. We used radiotelemetry to study the seasonal home ranges, movements, and habitat associations of Dixie Valley Toads in autumn 2018 and spring 2019. We found that toads were very closely associated with water in both seasons, with most observations occurring in water, especially for males in spring and all toads in the autumn. Even when found in terrestrial habitat, toads were a median distance of 4.2 m (95% credible interval = 3.3–5.3) from water; 95% of the time in spring and autumn, toads were within 14 m of water. Dixie Valley Toad habitat selection indicated a similar pattern, with selection in both spring and autumn for locations closer to water and for warmer water and substrates than at nearby available locations. In autumn, toads also avoided bare ground and terrestrial graminoids. Dixie Valley Toads selected brumation sites in, over (within dense vegetation), or near water, often near springs where water depths and temperatures are likely stable through the winter. The reliance of Dixie Valley Toads on water in spring, autumn, and during brumation suggests that alteration to historical flows and water temperatures are likely to affect the toads. Changes to the hydrothermal environment when toads are brumating could be particularly detrimental, potentially killing inactive toads.

Herpetologica↗

Life history and ecology of Cambarus halli (Hobbs)

The life history of Cambarus halli, a crayfish endemic to the Tallapoosa River Basin, GA, was studied at four sites within the Tallapoosa River. Two sites had allopatric populations of C. halli, and two sites had populations of C. halli sympatric with C. englishi. Three age classes existed across sites. For Cambarus halli, total number of pleopodal eggs was positively related to carapace length, but egg size was only weakly positively related to carapace length. Cambarus halli were smaller across age classes at sympatric sites, but had greater growth rates than at allopatric sites. Cambarus halli density estimates were lower at sympatric sites, while proportions of reproductively active age-1 and age-2 individuals were higher at allopatric sites (63% vs. 33%).

Southeastern Naturalist↗

Comprehensive framework for ecological assessment of the Migratory Bird Habitat Initiative following the Deepwater Horizon oil spill

Following the Deepwater Horizon oil spill in the Gulf of Mexico in April 2010, the USDA Natural Resources Conservation Service (NRCS) established and funded the Migratory Bird Habitat Initiative (MBHI), with the goal of improving and increasing wetland habitats on private lands to benefit wintering and migrating waterbirds displaced from oil-impacted coastal wetlands. The NRCS and conservation partners provided financial and technical assistance to landowners and managers of sites enrolled in various conservation easement programs, and incorporated approximately 190,000 ha of wetlands and agricultural lands in the Mississippi Alluvial Valley (MAV) and Gulf Coast regions in the MBHI. In fall 2010, the NRCS worked with scientists and graduate students from three universities and various conservation agencies to design and implement landscape-scale evaluations of (1) the use of MBHI-managed wetlands and comparable non-MBHI wetlands by Charadriiformes (shorebirds), Anseriformes (waterfowl), and other waterbirds; and (2) the relative effectiveness of different MBHI practices for providing habitat and food resources for migrating, resident, and wintering waterbirds. In this paper, we describe the scientific framework designed to evaluate the MBHI in improving waterbird habitats on private lands in the MAV, the Gulf Coast Prairies in Louisiana and Texas, and Gulf coastal wetlands of Mississippi and Alabama. The results of our evaluation will enhance our understanding of the influence of MBHI, other Farm Bill Conservation Initiative managed lands (e.g., Wetland Reserve Program), and selected agricultural working lands (e.g., Oryza sativa L. [Rice] fields in southern Louisiana and Texas) on wintering and migrating waterbirds. A proactive approach that uses science to evaluate governmental conservation programs is relevant and can inform development of meaningful public policy that likely will be needed for effective delivery of future conservation programs and to justify financial incentives paid to landowners to apply best management practices.

Southeastern Naturalist↗

Ecological and evolutionary consequences of benthic community stasis in the very deep sea (>1500 m)

An enigma of deep-sea biodiversity research is that the abyss with its low productivity and densities appears to have a biodiversity similar to that of shallower depths. This conceptualization of similarity is based mainly on per-sample estimates (point diversity, within-habitat, or α-diversity). Here, we use a measure of between-sample within-community diversity (β 1H ) to examine benthic foraminiferal diversity between 333 stations within 49 communties from New Zealand, the South Atlantic, the Gulf of Mexico, the Norwegian Sea, and the Arctic. The communities are grouped into two depth categories: 200–1500 m and >1500 m. β 1H diversity exhibits no evidence of regional differences. Instead, higher values at shallower depths are observed worldwide. At depths of >1500 m the average β 1H is zero, indicating stasis or no biodiversity gradient. The difference in β 1H -diversity explains why, despite species richness often being greater per sample at deeper depths, the total number of species is greater at shallower depths. The greater number of communities and higher rate of evolution resulting in shorter species durations at shallower depths is also consistent with higher β 1H values.

Arctic Ocean;Gulf Of Mexico;Norwegian Sea;South At↗